Guide to the Human Genome
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Name: TP53BP1 Sequence: fasta or formatted (1972aa) NCBI GI: 5032189
Description:

tumor protein p53 binding protein 1 isoform 3

Referenced in:

p53 Pathway

Other entries for this name:
alt prot [1975aa] tumor protein p53 binding protein 1 isoform 2
alt prot [1977aa] tumor protein p53 binding protein 1 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5        109           3
 C cysteine            1.8         36           1
 D aspartate           6.1        121           2
 E glutamate          10.6        209           5
 F phenylalanine       2.0         39           1
 G glycine             6.8        135           2
 H histidine           2.0         40           2
 I isoleucine          3.6         71           2
 K lysine              5.3        105           2
 L leucine             7.8        154           2
 M methionine          1.6         32           1
 N asparagine          2.9         57           2
 P proline             7.7        151           3
 Q glutamine           5.6        110           3
 R arginine            3.9         77           2
 S serine             12.5        246           5
 T threonine           6.3        125           2
 V valine              6.1        120           3
 W tryptophan          0.4          8           1
 Y tyrosine            1.4         27           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tumor protein p53 binding protein 1 isoform 3 
TP53BP1               1.000   tumor protein p53 binding protein 1 isoform 1 [Homo...
TP53BP1               0.998   tumor protein p53 binding protein 1 isoform 2 [Homo...
DSPP                  0.013   dentin sialophosphoprotein preproprotein 
MUC17                 0.012   mucin 17 
NEFH                  0.011   neurofilament, heavy polypeptide 200kDa 
PCLO                  0.011   piccolo isoform 2 
PCLO                  0.011   piccolo isoform 1 
MICAL3                0.009   microtubule associated monoxygenase, calponin and L...
MYST3                 0.009   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.009   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.009   MYST histone acetyltransferase (monocytic leukemia)...
ANK2                  0.009   ankyrin 2 isoform 1 
RP1L1                 0.008   retinitis pigmentosa 1-like 1 
BOD1L                 0.007   biorientation of chromosomes in cell division 1-like...
SRRM2                 0.007   splicing coactivator subunit SRm300 
CMYA5                 0.007   cardiomyopathy associated 5 
NEFM                  0.007   neurofilament, medium polypeptide 150kDa isoform 1 ...
NEFM                  0.007   neurofilament, medium polypeptide 150kDa isoform 2 ...
FNDC1                 0.007   fibronectin type III domain containing 1 
NACAD                 0.006   NAC alpha domain containing 
NACAD                 0.006   PREDICTED: NAC alpha domain containing 
SLK                   0.006   serine/threonine kinase 2 
SETD1B                0.006   SET domain containing 1B 
NACAD                 0.006   PREDICTED: NAC alpha domain containing 
NACAD                 0.006   PREDICTED: NAC alpha domain containing 
EIF4G1                0.006   eukaryotic translation initiation factor 4 gamma, 1 ...
EIF4G1                0.006   eukaryotic translation initiation factor 4 gamma, 1 ...
EIF4G1                0.006   eukaryotic translation initiation factor 4 gamma, 1 ...
ZFP106                0.006   zinc finger protein 106 homolog 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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