Guide to the Human Genome
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Name: ASB8 Sequence: fasta or formatted (288aa) NCBI GI: 13129098
Description:

ankyrin repeat and SOCS box-containing 8

Referenced in:

Ankyrin Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.4         30           2
 C cysteine            3.1          9           1
 D aspartate           5.2         15           1
 E glutamate           7.3         21           1
 F phenylalanine       1.4          4           1
 G glycine             6.2         18           2
 H histidine           2.4          7           1
 I isoleucine          3.5         10           1
 K lysine              4.2         12           1
 L leucine            15.3         44           4
 M methionine          2.1          6           1
 N asparagine          5.2         15           2
 P proline             4.2         12           1
 Q glutamine           1.7          5           1
 R arginine            5.9         17           2
 S serine              6.6         19           3
 T threonine           4.2         12           1
 V valine              6.6         19           1
 W tryptophan          1.0          3           1
 Y tyrosine            3.5         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ankyrin repeat and SOCS box-containing 8 
ANKRD28               0.125   ankyrin repeat domain 28 
ANKRD44               0.125   ankyrin repeat domain 44 
ASB13                 0.119   ankyrin repeat and SOCS box-containing protein 13 [H...
PSMD10                0.118   proteasome 26S non-ATPase subunit 10 isoform 1 
ANK1                  0.112   ankyrin 1 isoform 9 
ANK1                  0.112   ankyrin 1 isoform 1 
ANK1                  0.112   ankyrin 1 isoform 3 
ANK1                  0.112   ankyrin 1 isoform 2 
ANK1                  0.112   ankyrin 1 isoform 4 
TANC1                 0.110   tetratricopeptide repeat, ankyrin repeat and coiled...
TANC1                 0.110   tetratricopeptide repeat, ankyrin repeat and coiled...
ANK2                  0.108   ankyrin 2 isoform 3 
ANK2                  0.108   ankyrin 2 isoform 2 
ANK2                  0.108   ankyrin 2 isoform 1 
ANK3                  0.108   ankyrin 3 isoform 1 
ANKK1                 0.107   ankyrin repeat and kinase domain containing 1 
ANKRD27               0.105   ankyrin repeat domain 27 (VPS9 domain) 
ASB4                  0.105   ankyrin repeat and SOCS box-containing protein 4 isof...
ANKRD35               0.105   ankyrin repeat domain 35 
ANKRD50               0.105   ankyrin repeat domain 50 
ASB16                 0.103   ankyrin repeat and SOCS box-containing protein 16 [H...
HACE1                 0.103   HECT domain and ankyrin repeat containing, E3 ubiqu...
ANKRD54               0.103   ankyrin repeat domain 54 
ANKRD52               0.103   ankyrin repeat domain 52 
ANKRD23               0.103   diabetes related ankyrin repeat protein 
TANC2                 0.101   tetratricopeptide repeat, ankyrin repeat and coiled...
ASB9                  0.099   ankyrin repeat and SOCS box-containing 9 isoform 1 [...
RIPK4                 0.099   ankyrin repeat domain 3 
ASB4                  0.099   ankyrin repeat and SOCS box-containing protein 4 iso...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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