Guide to the Human Genome
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Name: ASB16 Sequence: fasta or formatted (453aa) NCBI GI: 24586688
Description:

ankyrin repeat and SOCS box-containing protein 16

Referenced in:

Ankyrin Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            15.2         69           3
 C cysteine            4.2         19           1
 D aspartate           2.6         12           1
 E glutamate           7.3         33           2
 F phenylalanine       2.2         10           1
 G glycine             6.4         29           2
 H histidine           3.3         15           1
 I isoleucine          1.1          5           1
 K lysine              1.5          7           1
 L leucine            13.2         60           3
 M methionine          1.3          6           1
 N asparagine          2.9         13           1
 P proline             5.7         26           2
 Q glutamine           6.0         27           2
 R arginine            9.5         43           3
 S serine              4.2         19           2
 T threonine           5.1         23           2
 V valine              5.1         23           1
 W tryptophan          1.5          7           1
 Y tyrosine            1.5          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ankyrin repeat and SOCS box-containing protein 16 [H... 
ASB10                 0.295   ankyrin repeat and SOCS box-containing 10 isoform 3...
ASB18                 0.290   ankyrin repeat and SOCS box-containing 18 
ASB10                 0.254   ankyrin repeat and SOCS box-containing 10 isoform 1...
ASB10                 0.219   ankyrin repeat and SOCS box-containing 10 isoform 2...
ASB4                  0.191   ankyrin repeat and SOCS box-containing protein 4 isof...
ASB4                  0.130   ankyrin repeat and SOCS box-containing protein 4 iso...
ANKHD1                0.085   ankyrin repeat and KH domain containing 1 isoform 3 ...
ANKHD1                0.085   ankyrin repeat and KH domain containing 1 isoform 2 ...
ANKHD1                0.085   ankyrin repeat and KH domain containing 1 isoform 1 ...
ANKHD1-EIF4EBP3       0.085   ANKHD1-EIF4EBP3 protein 
ANKK1                 0.084   ankyrin repeat and kinase domain containing 1 
ANK3                  0.084   ankyrin 3 isoform 1 
ANKRD35               0.081   ankyrin repeat domain 35 
ANKRD17               0.080   ankyrin repeat domain protein 17 isoform a 
ANKRD17               0.080   ankyrin repeat domain protein 17 isoform b 
ANK2                  0.080   ankyrin 2 isoform 3 
ANK2                  0.080   ankyrin 2 isoform 2 
ANK2                  0.080   ankyrin 2 isoform 1 
ASB9                  0.077   ankyrin repeat and SOCS box-containing 9 isoform 2 [...
ASB9                  0.077   ankyrin repeat and SOCS box-containing 9 isoform 1 [...
ANKRD44               0.077   ankyrin repeat domain 44 
ANK1                  0.076   ankyrin 1 isoform 9 
ANK1                  0.076   ankyrin 1 isoform 1 
ANK1                  0.076   ankyrin 1 isoform 3 
ANK1                  0.076   ankyrin 1 isoform 2 
ANK1                  0.076   ankyrin 1 isoform 4 
NOTCH4                0.076   notch4 preproprotein 
DAPK1                 0.075   death-associated protein kinase 1 
ANKRD28               0.074   ankyrin repeat domain 28 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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