Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ASB4 Sequence: fasta or formatted (349aa) NCBI GI: 22208964
Description:

ankyrin repeat and SOCS box-containing protein 4 isoform b

Referenced in:

Ankyrin Family

Other entries for this name:
alt prot [426aa] ankyrin repeat and SOCS box-containing protein 4 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.9         38           2
 C cysteine            3.7         13           1
 D aspartate           4.6         16           3
 E glutamate           5.4         19           2
 F phenylalanine       2.9         10           1
 G glycine             4.3         15           1
 H histidine           4.9         17           2
 I isoleucine          4.0         14           1
 K lysine              6.3         22           1
 L leucine            11.7         41           3
 M methionine          3.2         11           2
 N asparagine          5.2         18           2
 P proline             3.7         13           2
 Q glutamine           3.2         11           1
 R arginine            3.7         13           1
 S serine              5.4         19           2
 T threonine           4.6         16           2
 V valine              7.7         27           2
 W tryptophan          1.4          5           1
 Y tyrosine            3.2         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ankyrin repeat and SOCS box-containing protein 4 iso... 
ASB4                  0.942   ankyrin repeat and SOCS box-containing protein 4 isof...
ASB18                 0.191   ankyrin repeat and SOCS box-containing 18 
ASB10                 0.174   ankyrin repeat and SOCS box-containing 10 isoform 3...
ASB10                 0.171   ankyrin repeat and SOCS box-containing 10 isoform 1...
ASB16                 0.170   ankyrin repeat and SOCS box-containing protein 16 [H...
ASB10                 0.168   ankyrin repeat and SOCS box-containing 10 isoform 2...
ANKRD28               0.107   ankyrin repeat domain 28 
ANK1                  0.103   ankyrin 1 isoform 9 
ANK1                  0.103   ankyrin 1 isoform 1 
ANK1                  0.103   ankyrin 1 isoform 3 
ANK1                  0.103   ankyrin 1 isoform 2 
ANK1                  0.103   ankyrin 1 isoform 4 
ANKRD44               0.100   ankyrin repeat domain 44 
ANK2                  0.097   ankyrin 2 isoform 3 
ANK2                  0.097   ankyrin 2 isoform 2 
ANK2                  0.097   ankyrin 2 isoform 1 
ANK3                  0.097   ankyrin 3 isoform 1 
ANKRD17               0.096   ankyrin repeat domain protein 17 isoform a 
ANKRD17               0.096   ankyrin repeat domain protein 17 isoform b 
ANKRD35               0.093   ankyrin repeat domain 35 
ANKRD52               0.090   ankyrin repeat domain 52 
ANKK1                 0.088   ankyrin repeat and kinase domain containing 1 
ANKHD1                0.087   ankyrin repeat and KH domain containing 1 isoform 3 ...
ANKHD1                0.087   ankyrin repeat and KH domain containing 1 isoform 2 ...
ANKHD1                0.087   ankyrin repeat and KH domain containing 1 isoform 1 ...
ANKHD1-EIF4EBP3       0.087   ANKHD1-EIF4EBP3 protein 
ANKRD50               0.086   ankyrin repeat domain 50 
ASB8                  0.080   ankyrin repeat and SOCS box-containing 8 
TNNI3K                0.078   TNNI3 interacting kinase isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press