Guide to the Human Genome
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Name: ASB13 Sequence: fasta or formatted (278aa) NCBI GI: 22208957
Description:

ankyrin repeat and SOCS box-containing protein 13

Referenced in:

Ankyrin Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.9         33           2
 C cysteine            4.7         13           1
 D aspartate           4.7         13           1
 E glutamate           5.8         16           1
 F phenylalanine       1.8          5           1
 G glycine             6.8         19           2
 H histidine           3.6         10           2
 I isoleucine          4.0         11           1
 K lysine              4.7         13           2
 L leucine            12.2         34           3
 M methionine          1.1          3           1
 N asparagine          4.7         13           1
 P proline             4.7         13           2
 Q glutamine           3.6         10           2
 R arginine            4.7         13           1
 S serine              6.5         18           3
 T threonine           4.0         11           1
 V valine              7.2         20           1
 W tryptophan          0.7          2           1
 Y tyrosine            2.9          8           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ankyrin repeat and SOCS box-containing protein 13 [H... 
ASB5                  0.336   ankyrin repeat and SOCS box-containing protein 5 [Ho...
ASB9                  0.323   ankyrin repeat and SOCS box-containing 9 isoform 1 [...
ASB11                 0.318   ankyrin repeat and SOCS box-containing protein 11 is...
ASB11                 0.316   ankyrin repeat and SOCS box-containing protein 11 is...
ASB9                  0.279   ankyrin repeat and SOCS box-containing 9 isoform 2 [...
ANKRD28               0.172   ankyrin repeat domain 28 
ANK1                  0.163   ankyrin 1 isoform 9 
ANK1                  0.163   ankyrin 1 isoform 1 
ANK1                  0.163   ankyrin 1 isoform 3 
ANK1                  0.163   ankyrin 1 isoform 2 
ANK1                  0.163   ankyrin 1 isoform 4 
ANK2                  0.161   ankyrin 2 isoform 3 
ANK2                  0.161   ankyrin 2 isoform 2 
ANK2                  0.161   ankyrin 2 isoform 1 
ANKRD50               0.152   ankyrin repeat domain 50 
ANK3                  0.150   ankyrin 3 isoform 1 
ASB3                  0.148   ankyrin repeat and SOCS box-containing protein 3 isof...
CTTNBP2               0.144   cortactin binding protein 2 
ASB7                  0.139   ankyrin repeat and SOCS box-containing protein 7 iso...
ANKRD44               0.139   ankyrin repeat domain 44 
ANKRD52               0.137   ankyrin repeat domain 52 
ANKK1                 0.135   ankyrin repeat and kinase domain containing 1 
ANKDD1A               0.133   ankyrin repeat and death domain containing 1A 
RIPK4                 0.133   ankyrin repeat domain 3 
ASB12                 0.133   ankyrin repeat and SOCS box-containing protein 12 [H...
KIDINS220             0.131   kinase D-interacting substrate of 220 kDa 
ANKHD1                0.128   ankyrin repeat and KH domain containing 1 isoform 1 ...
ANKHD1-EIF4EBP3       0.128   ANKHD1-EIF4EBP3 protein 
ANKRD17               0.128   ankyrin repeat domain protein 17 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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