Guide to the Human Genome
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Name: TPO Sequence: fasta or formatted (760aa) NCBI GI: 28558990
Description:

thyroid peroxidase isoform e

Referenced in:

Superoxide Pathway
Thyroid and Thyroid Hormone Receptor

Other entries for this name:
alt prot [933aa] thyroid peroxidase isoform a
alt prot [876aa] thyroid peroxidase isoform b
alt prot [889aa] thyroid peroxidase isoform d
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.6         58           3
 C cysteine            3.3         25           1
 D aspartate           5.8         44           3
 E glutamate           5.9         45           2
 F phenylalanine       4.2         32           2
 G glycine             7.8         59           3
 H histidine           2.4         18           1
 I isoleucine          3.8         29           2
 K lysine              3.2         24           2
 L leucine            10.1         77           2
 M methionine          2.1         16           1
 N asparagine          3.6         27           2
 P proline             6.8         52           2
 Q glutamine           4.5         34           2
 R arginine            7.1         54           2
 S serine              6.7         51           2
 T threonine           6.2         47           1
 V valine              4.7         36           2
 W tryptophan          2.1         16           2
 Y tyrosine            2.1         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   thyroid peroxidase isoform e 
TPO                   0.642   thyroid peroxidase isoform a 
TPO                   0.565   thyroid peroxidase isoform d 
TPO                   0.552   thyroid peroxidase isoform b 
MPO                   0.171   myeloperoxidase 
EPX                   0.171   eosinophil peroxidase 
LPO                   0.171   lactoperoxidase isoform 3 preproprotein 
LPO                   0.171   lactoperoxidase isoform 1 preproprotein 
PXDN                  0.148   peroxidasin 
PXDNL                 0.128   peroxidasin homolog-like 
SVEP1                 0.030   polydom 
DUOX1                 0.027   dual oxidase 1 precursor 
DUOX1                 0.027   dual oxidase 1 precursor 
DUOX2                 0.026   dual oxidase 2 precursor 
LTBP3                 0.025   latent transforming growth factor beta binding prot...
LTBP3                 0.025   latent transforming growth factor beta binding prote...
FBN1                  0.019   fibrillin 1 precursor 
FBN2                  0.017   fibrillin 2 precursor 
FBN3                  0.017   fibrillin 3 precursor 
MEGF6                 0.017   EGF-like-domain, multiple 3 
LRP4                  0.017   low density lipoprotein receptor-related protein 4 ...
SNED1                 0.017   6720455I24Rik homolog 
LTBP4                 0.017   latent transforming growth factor beta binding prot...
LTBP4                 0.017   latent transforming growth factor beta binding prot...
LTBP4                 0.017   latent transforming growth factor beta binding prot...
LTBP1                 0.016   latent transforming growth factor beta binding prote...
LTBP1                 0.016   latent transforming growth factor beta binding prote...
LTBP2                 0.015   latent transforming growth factor beta binding protei...
EFEMP2                0.015   EGF-containing fibulin-like extracellular matrix pr...
HMCN1                 0.015   hemicentin 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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