Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 4557739
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4557739 soluble mannose-binding lectin precursor [Homo
sapiens]
(248 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4557739 soluble mannose-binding lectin precursor [Homo sapiens] 513 e-146
gi|61699226 pulmonary surfactant-associated protein D precursor ... 173 1e-43
gi|38888175 surfactant, pulmonary-associated protein A1B [Homo s... 147 8e-36
gi|148886696 surfactant protein A2 [Homo sapiens] 147 1e-35
gi|146149162 surfactant, pulmonary-associated protein A2 [Homo s... 147 1e-35
gi|147903070 surfactant protein A1 [Homo sapiens] 139 2e-33
gi|13128972 collectin sub-family member 11 isoform a [Homo sapiens] 111 5e-25
gi|5453619 collectin sub-family member 10 [Homo sapiens] 107 7e-24
gi|18641360 collectin sub-family member 12 [Homo sapiens] 103 2e-22
gi|40548420 collectin sub-family member 11 isoform b [Homo sapiens] 101 5e-22
gi|148728186 C-type lectin domain family 3 member A [Homo sapiens] 77 1e-14
gi|4757760 adiponectin precursor [Homo sapiens] 75 7e-14
gi|116256356 alpha 4 type IV collagen precursor [Homo sapiens] 74 9e-14
gi|55743096 collagen, type XIV, alpha 1 [Homo sapiens] 74 1e-13
gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens] 73 2e-13
gi|111118972 collagen, type XI, alpha 2 isoform 2 preproprotein ... 73 3e-13
gi|111118968 collagen, type XI, alpha 2 isoform 3 preproprotein ... 73 3e-13
gi|111118970 collagen, type XI, alpha 2 isoform 1 preproprotein ... 73 3e-13
gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens] 71 8e-13
gi|18780273 collagen, type XXI, alpha 1 precursor [Homo sapiens] 71 1e-12
gi|89142737 alpha 3 type IV collagen isoform 5 precursor [Homo s... 70 1e-12
gi|89142735 alpha 3 type IV collagen isoform 4 precursor [Homo s... 70 1e-12
gi|89142733 alpha 3 type IV collagen isoform 2 precursor [Homo s... 70 1e-12
gi|89142730 alpha 3 type IV collagen isoform 1 precursor [Homo s... 70 1e-12
gi|38570075 collagen, type XXV, alpha 1 isoform 1 [Homo sapiens] 70 1e-12
gi|38570073 collagen, type XXV, alpha 1 isoform 2 [Homo sapiens] 70 1e-12
gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens] 70 2e-12
gi|11386161 alpha 2 type IX collagen [Homo sapiens] 70 2e-12
gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens] 70 2e-12
gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens] 70 2e-12
>gi|4557739 soluble mannose-binding lectin precursor [Homo sapiens]
Length = 248
Score = 513 bits (1321), Expect = e-146
Identities = 248/248 (100%), Positives = 248/248 (100%)
Query: 1 MSLFPSLPLLLLSMVAASYSETVTCEDAQKTCPAVIACSSPGINGFPGKDGRDGTKGEKG 60
MSLFPSLPLLLLSMVAASYSETVTCEDAQKTCPAVIACSSPGINGFPGKDGRDGTKGEKG
Sbjct: 1 MSLFPSLPLLLLSMVAASYSETVTCEDAQKTCPAVIACSSPGINGFPGKDGRDGTKGEKG 60
Query: 61 EPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGKSPDGDSSLAASERKALQTEMA 120
EPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGKSPDGDSSLAASERKALQTEMA
Sbjct: 61 EPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGKSPDGDSSLAASERKALQTEMA 120
Query: 121 RIKKWLTFSLGKQVGNKFFLTNGEIMTFEKVKALCVKFQASVATPRNAAENGAIQNLIKE 180
RIKKWLTFSLGKQVGNKFFLTNGEIMTFEKVKALCVKFQASVATPRNAAENGAIQNLIKE
Sbjct: 121 RIKKWLTFSLGKQVGNKFFLTNGEIMTFEKVKALCVKFQASVATPRNAAENGAIQNLIKE 180
Query: 181 EAFLGITDEKTEGQFVDLTGNRLTYTNWNEGEPNNAGSDEDCVLLLKNGQWNDVPCSTSH 240
EAFLGITDEKTEGQFVDLTGNRLTYTNWNEGEPNNAGSDEDCVLLLKNGQWNDVPCSTSH
Sbjct: 181 EAFLGITDEKTEGQFVDLTGNRLTYTNWNEGEPNNAGSDEDCVLLLKNGQWNDVPCSTSH 240
Query: 241 LAVCEFPI 248
LAVCEFPI
Sbjct: 241 LAVCEFPI 248
>gi|61699226 pulmonary surfactant-associated protein D precursor
[Homo sapiens]
Length = 375
Score = 173 bits (439), Expect = 1e-43
Identities = 99/227 (43%), Positives = 125/227 (55%), Gaps = 20/227 (8%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPGQ----GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKG 95
+PG+ G G G G KGE+G PG+ G G G G +GP G+PG G PG KG KG
Sbjct: 149 APGMQGSAGARGLAGPKGERGVPGERGVPGNTGAAGSAGAMGPQGSPGARGPPGLKGDKG 208
Query: 96 DPG-KSPDGDSSL--AASERKA----------LQTEMARIKKWLTFSLGKQVGNKFFLTN 142
PG K G+S L AS R+ LQ ++ KK F G+ VG K F T
Sbjct: 209 IPGDKGAKGESGLPDVASLRQQVEALQGQVQHLQAAFSQYKKVELFPNGQSVGEKIFKTA 268
Query: 143 GEIMTFEKVKALCVKFQASVATPRNAAENGAIQNLI---KEEAFLGITDEKTEGQFVDLT 199
G + F + + LC + +A+PR+AAEN A+Q L+ E AFL +TD KTEG+F T
Sbjct: 269 GFVKPFTEAQLLCTQAGGQLASPRSAAENAALQQLVVAKNEAAFLSMTDSKTEGKFTYPT 328
Query: 200 GNRLTYTNWNEGEPNNAGSDEDCVLLLKNGQWNDVPCSTSHLAVCEF 246
G L Y+NW GEPN+ G EDCV + NG+WND C L VCEF
Sbjct: 329 GESLVYSNWAPGEPNDDGGSEDCVEIFTNGKWNDRACGEKRLVVCEF 375
Score = 67.8 bits (164), Expect = 8e-12
Identities = 44/106 (41%), Positives = 58/106 (54%), Gaps = 7/106 (6%)
Query: 1 MSLFPSLPLLLLSMVAASYSETVTCEDAQKTCPA---VIACSS--PGINGFPGKDGRDGT 55
M LF L+LL+ Y E + +T P+ ++ CSS G+ G G+DGR+G
Sbjct: 1 MLLFLLSALVLLTQ-PLGYLEAEMKTYSHRTMPSACTLVMCSSVESGLPGRDGRDGREGP 59
Query: 56 KGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGKS 100
+GEKG+PG G G G PG+ GP G G +GS G G KGD G S
Sbjct: 60 RGEKGDPGLPGAAGQAGMPGQAGPVGPKGDNGSVGEPGPKGDTGPS 105
>gi|38888175 surfactant, pulmonary-associated protein A1B [Homo
sapiens]
Length = 248
Score = 147 bits (371), Expect = 8e-36
Identities = 91/254 (35%), Positives = 130/254 (51%), Gaps = 25/254 (9%)
Query: 8 PLLLLSMVAASYSETVTCEDAQKTCPAVIACSSPGINGFPGKDGRDGTKGEKGEPGQGLR 67
PL L ++ A+ +D P + +PG +G PG+DGRDG KG+ G PG
Sbjct: 5 PLALNLILMAASGAVCEVKDVCVGSPGIPG--TPGSHGLPGRDGRDGLKGDPGPPGP--- 59
Query: 68 GLQGPPGKLG-PPGN---PGPSGSPGPKGQKGDPGKSPDGDSSLAASERKALQTEMARIK 123
GPPG++ PPGN PG G PG G+KG+PG+ G L A + LQ + +
Sbjct: 60 --MGPPGEMPCPPGNDGLPGAPGIPGECGEKGEPGER--GPPGLPAHLDEELQATLHDFR 115
Query: 124 KWLTFSLGK--------QVGNKFFLTNGEIMTFEKVKALCVKFQASVATPRNAAENGAIQ 175
+ + G VG K F +NG+ +TF+ ++ C + +A PRN EN AI
Sbjct: 116 HQILQTRGALSLQGSIMTVGEKVFSSNGQSITFDAIQEACARAGGRIAVPRNPEENEAIA 175
Query: 176 NLIKE---EAFLGITDEKTEGQFVDLTGNRLTYTNWNEGEPNNAGSDEDCVLLLKNGQWN 232
+ +K+ A++G+T+ + G F G + YTNW GEP G E CV + +GQWN
Sbjct: 176 SFVKKYNTYAYVGLTEGPSPGDFRYSDGTPVNYTNWYRGEPAGRGK-EQCVEMYTDGQWN 234
Query: 233 DVPCSTSHLAVCEF 246
D C S L +CEF
Sbjct: 235 DRNCLYSRLTICEF 248
>gi|148886696 surfactant protein A2 [Homo sapiens]
Length = 248
Score = 147 bits (370), Expect = 1e-35
Identities = 88/252 (34%), Positives = 130/252 (51%), Gaps = 21/252 (8%)
Query: 8 PLLLLSMVAASYSETVTCEDAQKTCPAVIACSSPGINGFPGKDGRDGTKGEKGEPGQGLR 67
PL L ++ A+ +D P + +PG +G PG+DGRDG KG+ G PG
Sbjct: 5 PLALTLILMAASGAACEVKDVCVGSPGIPG--TPGSHGLPGRDGRDGVKGDPGPPGP--- 59
Query: 68 GLQGPPGKLG-PPGNPGPSGSPGPKGQKGDPGKSPD-GDSSLAASERKALQTEMARIKKW 125
GPPG+ PPGN G G+PG G++G+ G++ + G L A + LQ + +
Sbjct: 60 --MGPPGETPCPPGNNGLPGAPGVPGERGEKGEAGERGPPGLPAHLDEELQATLHDFRHQ 117
Query: 126 LTFSLGK--------QVGNKFFLTNGEIMTFEKVKALCVKFQASVATPRNAAENGAIQNL 177
+ + G VG K F +NG+ +TF+ ++ C + +A PRN EN AI +
Sbjct: 118 ILQTRGALSLQGSIMTVGEKVFSSNGQSITFDAIQEACARAGGRIAVPRNPEENEAIASF 177
Query: 178 IKE---EAFLGITDEKTEGQFVDLTGNRLTYTNWNEGEPNNAGSDEDCVLLLKNGQWNDV 234
+K+ A++G+T+ + G F G + YTNW GEP G E CV + +GQWND
Sbjct: 178 VKKYNTYAYVGLTEGPSPGDFRYSDGTPVNYTNWYRGEPAGRGK-EQCVEMYTDGQWNDR 236
Query: 235 PCSTSHLAVCEF 246
C S L +CEF
Sbjct: 237 NCLYSRLTICEF 248
>gi|146149162 surfactant, pulmonary-associated protein A2 [Homo
sapiens]
Length = 248
Score = 147 bits (370), Expect = 1e-35
Identities = 88/252 (34%), Positives = 130/252 (51%), Gaps = 21/252 (8%)
Query: 8 PLLLLSMVAASYSETVTCEDAQKTCPAVIACSSPGINGFPGKDGRDGTKGEKGEPGQGLR 67
PL L ++ A+ +D P + +PG +G PG+DGRDG KG+ G PG
Sbjct: 5 PLALTLILMAASGAACEVKDVCVGSPGIPG--TPGSHGLPGRDGRDGVKGDPGPPGP--- 59
Query: 68 GLQGPPGKLG-PPGNPGPSGSPGPKGQKGDPGKSPD-GDSSLAASERKALQTEMARIKKW 125
GPPG+ PPGN G G+PG G++G+ G++ + G L A + LQ + +
Sbjct: 60 --MGPPGETPCPPGNNGLPGAPGVPGERGEKGEAGERGPPGLPAHLDEELQATLHDFRHQ 117
Query: 126 LTFSLGK--------QVGNKFFLTNGEIMTFEKVKALCVKFQASVATPRNAAENGAIQNL 177
+ + G VG K F +NG+ +TF+ ++ C + +A PRN EN AI +
Sbjct: 118 ILQTRGALSLQGSIMTVGEKVFSSNGQSITFDAIQEACARAGGRIAVPRNPEENEAIASF 177
Query: 178 IKE---EAFLGITDEKTEGQFVDLTGNRLTYTNWNEGEPNNAGSDEDCVLLLKNGQWNDV 234
+K+ A++G+T+ + G F G + YTNW GEP G E CV + +GQWND
Sbjct: 178 VKKYNTYAYVGLTEGPSPGDFRYSDGTPVNYTNWYRGEPAGRGK-EQCVEMYTDGQWNDR 236
Query: 235 PCSTSHLAVCEF 246
C S L +CEF
Sbjct: 237 NCLYSRLTICEF 248
>gi|147903070 surfactant protein A1 [Homo sapiens]
Length = 245
Score = 139 bits (351), Expect = 2e-33
Identities = 88/251 (35%), Positives = 127/251 (50%), Gaps = 25/251 (9%)
Query: 8 PLLLLSMVAASYSETVTCEDAQKTCPAVIACSSPGINGFPGKDGRDGTKGEKGEPGQGLR 67
PL L ++ A+ +D P + +PG +G PG+DGRDG KG+ G PG
Sbjct: 5 PLALNLILMAASGAVCEVKDVCVGSPGIPG--TPGSHGLPGRDGRDGLKGDPGPPGP--- 59
Query: 68 GLQGPPGKLG-PPGN---PGPSGSPGPKGQKGDPGKSPDGDSSLAASERKALQTEMARIK 123
GPPG++ PPGN PG G PG G+KG+PG+ G L A + LQ + +
Sbjct: 60 --MGPPGEMPCPPGNDGLPGAPGIPGECGEKGEPGER--GPPGLPAHLDEELQATLHDFR 115
Query: 124 KWLTFSLGK--------QVGNKFFLTNGEIMTFEKVKALCVKFQASVATPRNAAENGAIQ 175
+ + G VG K F +NG+ +TF+ ++ C + +A PRN EN AI
Sbjct: 116 HQILQTRGALSLQGSIMTVGEKVFSSNGQSITFDAIQEACARAGGRIAVPRNPEENEAIA 175
Query: 176 NLIKE---EAFLGITDEKTEGQFVDLTGNRLTYTNWNEGEPNNAGSDEDCVLLLKNGQWN 232
+ +K+ A++G+T+ + G F G + YTNW GEP G E CV + +GQWN
Sbjct: 176 SFVKKYNTYAYVGLTEGPSPGDFRYSDGTPVNYTNWYRGEPAGRGK-EQCVEMYTDGQWN 234
Query: 233 DVPCSTSHLAV 243
D C S L +
Sbjct: 235 DRNCLYSRLTI 245
>gi|13128972 collectin sub-family member 11 isoform a [Homo sapiens]
Length = 271
Score = 111 bits (278), Expect = 5e-25
Identities = 73/226 (32%), Positives = 108/226 (47%), Gaps = 30/226 (13%)
Query: 42 GINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGP---PGNPGPSGSPGPKGQKGDP 97
G G PG+ GR G GEKG+ G +G +G G GK+GP G G SG GP G G+P
Sbjct: 50 GDKGAPGRPGRVGPTGEKGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEP 109
Query: 98 GK------------SPDGDSSLAASERKALQTEMARIKKWLTFSLGKQVGNKFFLTNGEI 145
G D S SE K ++ +A ++ + +K +L E
Sbjct: 110 GLPCECSQLRKAIGEMDNQVSQLTSELKFIKNAVAGVR---------ETESKIYLLVKEE 160
Query: 146 MTFEKVKALCVKFQASVATPRNAAENGAIQNLIKE----EAFLGITDEKTEGQFVDLTGN 201
+ + C +++ P++ A NG + + + F+GI D + EG FV +
Sbjct: 161 KRYADAQLSCQGRGGTLSMPKDEAANGLMAAYLAQAGLARVFIGINDLEKEGAFVYSDHS 220
Query: 202 RL-TYTNWNEGEPNNAGSDEDCVLLLKNGQWNDVPCSTSHLAVCEF 246
+ T+ W GEPNNA +EDCV ++ +G WNDV C T+ +CEF
Sbjct: 221 PMRTFNKWRSGEPNNAYDEEDCVEMVASGGWNDVACHTTMYFMCEF 266
>gi|5453619 collectin sub-family member 10 [Homo sapiens]
Length = 277
Score = 107 bits (268), Expect = 7e-24
Identities = 75/241 (31%), Positives = 112/241 (46%), Gaps = 29/241 (12%)
Query: 33 PAVIACSSPGINGFPGKDGRDGTKGEKGEPGQ-------GLRGLQGPPGKLGPPGNPGPS 85
P C++ I+ PG G DG KG+ GE G+ G +G++G G +G GN G +
Sbjct: 34 PTAEVCATHTIS--PGPKGDDGEKGDPGEEGKHGKVGRMGPKGIKGELGDMGDRGNIGKT 91
Query: 86 GSPGPKGQKGDPG-------KSPDGDSSLAASERK---ALQTEMARIKKWLTFSLG---- 131
G G KG KG+ G K G RK L +AR+K + F
Sbjct: 92 GPIGKKGDKGEKGLLGIPGEKGKAGTVCDCGRYRKFVGQLDISIARLKTSMKFVKNVIAG 151
Query: 132 -KQVGNKFFLTNGEIMTFEKVKALCVKFQASVATPRNAAENGAIQNLIKEEAF----LGI 186
++ KF+ E + + C +A P++ A N I + + + F +G+
Sbjct: 152 IRETEEKFYYIVQEEKNYRESLTHCRIRGGMLAMPKDEAANTLIADYVAKSGFFRVFIGV 211
Query: 187 TDEKTEGQFVDLTGNRL-TYTNWNEGEPNNAGSDEDCVLLLKNGQWNDVPCSTSHLAVCE 245
D + EGQ++ L Y+NWNEGEP++ EDCV +L +G+WND C + VCE
Sbjct: 212 NDLEREGQYMFTDNTPLQNYSNWNEGEPSDPYGHEDCVEMLSSGRWNDTECHLTMYFVCE 271
Query: 246 F 246
F
Sbjct: 272 F 272
>gi|18641360 collectin sub-family member 12 [Homo sapiens]
Length = 742
Score = 103 bits (256), Expect = 2e-22
Identities = 71/214 (33%), Positives = 96/214 (44%), Gaps = 16/214 (7%)
Query: 42 GINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGP---PGNPGPSGSPGPKGQKGDP 97
G G PG G++G G +G PG QGL+G G PG GP PG PG G PGPKG G P
Sbjct: 524 GDPGPPGPPGKEGLPGPQGPPGFQGLQGTVGEPGVPGPRGLPGLPGVPGMPGPKGPPGPP 583
Query: 98 GKSPDGDSSLAASERKALQTEMARIKKWLTFSLGKQVGNKFFLTNGEIMTFEKVKALCVK 157
G S +E + W F+ +K + + E FE K C
Sbjct: 584 GPSGAVVPLALQNEPTPAPEDNGCPPHWKNFT------DKCYYFSVEKEIFEDAKLFCED 637
Query: 158 FQASVATPRNAAENGAI--QNLIKEEAFLGITDEKTEGQFVDLTGNRLTYTNWNEGEPNN 215
+ + E I Q + +E ++G+TD + E ++ L G Y NW G+P+N
Sbjct: 638 KSSHLVFINTREEQQWIKKQMVGRESHWIGLTDSERENEWKWLDGTSPDYKNWKAGQPDN 697
Query: 216 ----AGSDEDCVLLLKNGQWNDVPCSTSHLAVCE 245
G EDC L+ GQWND C + +CE
Sbjct: 698 WGHGHGPGEDCAGLIYAGQWNDFQCEDVNNFICE 731
Score = 58.2 bits (139), Expect = 7e-09
Identities = 34/70 (48%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
S G G G G+ G KGE G PG G RG GP G G G G GS GPKG +G PG
Sbjct: 456 SQGPPGPTGNKGQKGEKGEPGPPGPAGERGPIGPAGPPGERGGKGSKGSQGPKGSRGSPG 515
Query: 99 K----SPDGD 104
K P GD
Sbjct: 516 KPGPQGPSGD 525
Score = 45.1 bits (105), Expect = 6e-05
Identities = 26/66 (39%), Positives = 32/66 (48%), Gaps = 14/66 (21%)
Query: 43 INGFPGKDGRDGTKGEKGEPGQGLRGLQGPP---------GKLGPPGNPGPSGSPGPKGQ 93
I F G G +G +G+ RG QGPP G+ G PG PGP+G GP G
Sbjct: 435 IKNFTILQGPPGPRGPRGD-----RGSQGPPGPTGNKGQKGEKGEPGPPGPAGERGPIGP 489
Query: 94 KGDPGK 99
G PG+
Sbjct: 490 AGPPGE 495
>gi|40548420 collectin sub-family member 11 isoform b [Homo sapiens]
Length = 268
Score = 101 bits (252), Expect = 5e-22
Identities = 66/213 (30%), Positives = 100/213 (46%), Gaps = 25/213 (11%)
Query: 48 GKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGKSP------ 101
G G G KG+KG G+ G GP G G G+ G G PGP G+ G P +
Sbjct: 62 GSQGDMGDKGQKGSVGR--HGKIGPIGSKGEKGDSGDIGPPGPNGEPGLPCECSQLRKAI 119
Query: 102 ---DGDSSLAASERKALQTEMARIKKWLTFSLGKQVGNKFFLTNGEIMTFEKVKALCVKF 158
D S SE K ++ +A ++ + +K +L E + + C
Sbjct: 120 GEMDNQVSQLTSELKFIKNAVAGVR---------ETESKIYLLVKEEKRYADAQLSCQGR 170
Query: 159 QASVATPRNAAENGAIQNLIKE----EAFLGITDEKTEGQFVDLTGNRL-TYTNWNEGEP 213
+++ P++ A NG + + + F+GI D + EG FV + + T+ W GEP
Sbjct: 171 GGTLSMPKDEAANGLMAAYLAQAGLARVFIGINDLEKEGAFVYSDHSPMRTFNKWRSGEP 230
Query: 214 NNAGSDEDCVLLLKNGQWNDVPCSTSHLAVCEF 246
NNA +EDCV ++ +G WNDV C T+ +CEF
Sbjct: 231 NNAYDEEDCVEMVASGGWNDVACHTTMYFMCEF 263
>gi|148728186 C-type lectin domain family 3 member A [Homo sapiens]
Length = 197
Score = 77.4 bits (189), Expect = 1e-14
Identities = 49/149 (32%), Positives = 76/149 (51%), Gaps = 18/149 (12%)
Query: 108 AASERKALQTEMARIKKWLTFSLGKQVGNKFFLTNGEIMTFEKVKALCVKFQASVATPRN 167
A E +ALQT R G +V K +L + + F + C+ + PRN
Sbjct: 57 ALKEIQALQTVCLR---------GTKVHKKCYLASEGLKHFHEANEDCISKGGILVIPRN 107
Query: 168 AAENGAIQNLIKE------EAFLGITDEKTEGQFVDLTGNRLTYTNWNEGEPNNAGSDED 221
+ E A+Q+ K + +LGI D TEG+FVD+ G +++ NW+ +P N G E+
Sbjct: 108 SDEINALQDYGKRSLPGVNDFWLGINDMVTEGKFVDVNGIAISFLNWDRAQP-NGGKREN 166
Query: 222 CVLLLKN--GQWNDVPCSTSHLAVCEFPI 248
CVL ++ G+W+D C +S +CEF I
Sbjct: 167 CVLFSQSAQGKWSDEACRSSKRYICEFTI 195
>gi|4757760 adiponectin precursor [Homo sapiens]
Length = 244
Score = 74.7 bits (182), Expect = 7e-14
Identities = 36/60 (60%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGK 99
PG NG PG+DGRDGT GEKGE G GL G +G G+ G PG GP G PG +G+KG+PG+
Sbjct: 47 PGHNGAPGRDGRDGTPGEKGEKGDPGLIGPKGDIGETGVPGAEGPRGFPGIQGRKGEPGE 106
Score = 48.9 bits (115), Expect = 4e-06
Identities = 28/66 (42%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 47 PGKDGRDGTKGE-------KGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGK 99
PG D T+G KG + G+ G PG G PG G G+PG KG+KGDPG
Sbjct: 14 PGHDQETTTQGPGVLLPLPKGACTGWMAGIPGHPGHNGAPGRDGRDGTPGEKGEKGDPGL 73
Query: 100 -SPDGD 104
P GD
Sbjct: 74 IGPKGD 79
>gi|116256356 alpha 4 type IV collagen precursor [Homo sapiens]
Length = 1690
Score = 74.3 bits (181), Expect = 9e-14
Identities = 36/66 (54%), Positives = 41/66 (62%), Gaps = 4/66 (6%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKL---GPPGNPGPSGSPGPKGQKGD 96
PG GFPG DG+DG KG G PG QG G GPPG+ GPPG GP+G PGP+G+ G
Sbjct: 1309 PGYKGFPGCDGKDGQKGPVGFPGPQGPHGFPGPPGEKGLPGPPGRKGPTGLPGPRGEPGP 1368
Query: 97 PGKSPD 102
P D
Sbjct: 1369 PADVDD 1374
Score = 67.8 bits (164), Expect = 8e-12
Identities = 38/82 (46%), Positives = 43/82 (52%), Gaps = 20/82 (24%)
Query: 41 PGINGFPGKDGRDGTKGEKGEP------------GQGLRGLQGPPGKLGPPGNPGPSGSP 88
PG G PG GRDG GEKG+P G+G G GPPGK GP G PG G P
Sbjct: 577 PGFPGQPGSHGRDGHAGEKGDPGPPGDHEDATPGGKGFPGPLGPPGKAGPVGPPG-LGFP 635
Query: 89 GPKGQKGDPG-------KSPDG 103
GP G++G PG + PDG
Sbjct: 636 GPPGERGHPGVPGHPGVRGPDG 657
Score = 63.9 bits (154), Expect = 1e-10
Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 6/65 (9%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPP----GNPGPSGSPGPKGQKG 95
+PG G PG DG G +G+KG P G++G +G PG+ GPP G PG G PGP G G
Sbjct: 973 TPGEPGPPGDDGFPGERGDKGTP--GMQGRRGEPGRYGPPGFHRGEPGEKGQPGPPGPPG 1030
Query: 96 DPGKS 100
PG +
Sbjct: 1031 PPGST 1035
Score = 63.9 bits (154), Expect = 1e-10
Identities = 37/70 (52%), Positives = 41/70 (58%), Gaps = 10/70 (14%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ----GLRGLQGPPGKLGPPGNPGPSGSP------GP 90
PG +G PG G G G +G+PG+ G RGLQG PG GPPG GPSGSP G
Sbjct: 1123 PGSSGPPGCPGDHGMPGLRGQPGEMGDPGPRGLQGDPGIPGPPGIKGPSGSPGLNGLHGL 1182
Query: 91 KGQKGDPGKS 100
KGQKG G S
Sbjct: 1183 KGQKGTKGAS 1192
Score = 60.8 bits (146), Expect = 1e-09
Identities = 31/58 (53%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
G G PG GR G+KG+ G PG G +G GPPG GPPG PG G+ GP G KG G
Sbjct: 500 GPPGPPGLPGRQGSKGDLGLPGWLGTKGDPGPPGAEGPPGLPGKHGASGPPGNKGAKG 557
Score = 60.1 bits (144), Expect = 2e-09
Identities = 35/81 (43%), Positives = 41/81 (50%), Gaps = 19/81 (23%)
Query: 41 PGINGFPG---KDGRDGTKGEKGEPGQ-------GLRGLQGPPGKLGPPGN--------- 81
PG GFPG K G +G G KGEPG+ G RGL+G G +GPPG+
Sbjct: 911 PGFPGFPGERGKPGAEGCPGAKGEPGEKGMSGLPGDRGLRGAKGAIGPPGDEGEMAIISQ 970
Query: 82 PGPSGSPGPKGQKGDPGKSPD 102
G G PGP G G PG+ D
Sbjct: 971 KGTPGEPGPPGDDGFPGERGD 991
Score = 60.1 bits (144), Expect = 2e-09
Identities = 34/67 (50%), Positives = 36/67 (53%), Gaps = 9/67 (13%)
Query: 45 GFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKG-------DP 97
G PG G G KGE+G+PG GP GK GPPG PG SG PGP G G DP
Sbjct: 1198 GPPGPVGIPGLKGERGDPGSPGISPPGPRGKKGPPGPPGSSGPPGPAGATGRAPKDIPDP 1257
Query: 98 GKSPDGD 104
G P GD
Sbjct: 1258 G--PPGD 1262
Score = 60.1 bits (144), Expect = 2e-09
Identities = 31/58 (53%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
PG G PG DG G G G PG + L+G PG G PG PGP G PGP G KG PG
Sbjct: 1260 PGDQGPPGPDGPRGAPGPPGLPGS-VDLLRGEPGDCGLPGPPGPPGPPGPPGYKGFPG 1316
Score = 59.7 bits (143), Expect = 2e-09
Identities = 30/57 (52%), Positives = 34/57 (59%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
GI G PG G G G KGE G G +G +G PG GP G+PG GSPG G KG+ G
Sbjct: 273 GIKGIPGMVGLPGPPGRKGESGIGAKGEKGIPGFPGPRGDPGSYGSPGFPGLKGELG 329
Score = 59.3 bits (142), Expect = 3e-09
Identities = 32/71 (45%), Positives = 39/71 (54%), Gaps = 8/71 (11%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ----GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGD 96
PG+ G+PG G G KG+ G+ G G++GL G PG+ G G PG G PGP G G
Sbjct: 839 PGLPGYPGSPGAPGGKGQPGDVGPPGPAGMKGLPGLPGRPGAHGPPGLPGIPGPFGDDGL 898
Query: 97 PG----KSPDG 103
PG K P G
Sbjct: 899 PGPPGPKGPRG 909
Score = 58.9 bits (141), Expect = 4e-09
Identities = 36/89 (40%), Positives = 40/89 (44%), Gaps = 23/89 (25%)
Query: 42 GINGFPGKDGRDGTKGEKGEPG----QGLRGLQGPPGKLGPP------------GNPGPS 85
G G PG G G GE+G PG +G G GPPG GPP G PG
Sbjct: 1088 GEPGSPGCPGHFGASGEQGLPGIQGPRGSPGRPGPPGSSGPPGCPGDHGMPGLRGQPGEM 1147
Query: 86 GSPGPKGQKGDPG-------KSPDGDSSL 107
G PGP+G +GDPG K P G L
Sbjct: 1148 GDPGPRGLQGDPGIPGPPGIKGPSGSPGL 1176
Score = 58.5 bits (140), Expect = 5e-09
Identities = 34/70 (48%), Positives = 39/70 (55%), Gaps = 12/70 (17%)
Query: 41 PGINGFPGKDGRDGTKGEKGE--------PGQ-GLRGLQGPPGKLG---PPGNPGPSGSP 88
PG+ G PG G DG KG+KG+ PG+ G G GPPG G P G PG SGS
Sbjct: 644 PGVPGHPGVRGPDGLKGQKGDTISCNVTYPGRHGPPGFDGPPGPKGFPGPQGAPGLSGSD 703
Query: 89 GPKGQKGDPG 98
G KG+ G PG
Sbjct: 704 GHKGRPGTPG 713
Score = 58.5 bits (140), Expect = 5e-09
Identities = 35/85 (41%), Positives = 37/85 (43%), Gaps = 26/85 (30%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPG--------------------------QGLRGLQGPP 73
SPG GF G DG G KG KG+P QGL G+QGP
Sbjct: 1055 SPGPPGFSGIDGARGPKGNKGDPASHFGPPGPKGEPGSPGCPGHFGASGEQGLPGIQGPR 1114
Query: 74 GKLGPPGNPGPSGSPGPKGQKGDPG 98
G G PG PG SG PG G G PG
Sbjct: 1115 GSPGRPGPPGSSGPPGCPGDHGMPG 1139
Score = 58.2 bits (139), Expect = 7e-09
Identities = 32/75 (42%), Positives = 34/75 (45%), Gaps = 8/75 (10%)
Query: 33 PAVIACSSPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKG 92
P + S PG G PG DGR G G G PG PPG+ G G G G PGP G
Sbjct: 1397 PGMRGPSGPGCKGEPGLDGRRGVDGVPGSPG--------PPGRKGDTGEDGYPGGPGPPG 1448
Query: 93 QKGDPGKSPDGDSSL 107
GDPG G L
Sbjct: 1449 PIGDPGPKGFGPGYL 1463
Score = 57.8 bits (138), Expect = 9e-09
Identities = 33/65 (50%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLG-----PPGNPGPSGSPGPKGQ 93
+PG++G G GR GT G PG G RG G PG G P G PGP GSPG GQ
Sbjct: 696 APGLSGSDGHKGRPGTPGTAEIPGPPGFRGDMGDPGFGGEKGSSPVGPPGPPGSPGVNGQ 755
Query: 94 KGDPG 98
KG PG
Sbjct: 756 KGIPG 760
Score = 57.4 bits (137), Expect = 1e-08
Identities = 34/77 (44%), Positives = 37/77 (48%), Gaps = 19/77 (24%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG----------QGLRGLQGPPGKLGPPGNP-------- 82
PG G PG G G G KG+PG +GL GL G PG GPPG P
Sbjct: 836 PGQPGLPGYPGSPGAPGGKGQPGDVGPPGPAGMKGLPGLPGRPGAHGPPGLPGIPGPFGD 895
Query: 83 -GPSGSPGPKGQKGDPG 98
G G PGPKG +G PG
Sbjct: 896 DGLPGPPGPKGPRGLPG 912
Score = 57.4 bits (137), Expect = 1e-08
Identities = 34/70 (48%), Positives = 41/70 (58%), Gaps = 8/70 (11%)
Query: 41 PGINGFPGKDGRDGT---KGEKGEPGQ----GL-RGLQGPPGKLGPPGNPGPSGSPGPKG 92
PG +GFPG+ G GT +G +GEPG+ G RG G G+ GPPG PGP GS G +G
Sbjct: 980 PGDDGFPGERGDKGTPGMQGRRGEPGRYGPPGFHRGEPGEKGQPGPPGPPGPPGSTGLRG 1039
Query: 93 QKGDPGKSPD 102
G PG D
Sbjct: 1040 FIGFPGLPGD 1049
Score = 57.4 bits (137), Expect = 1e-08
Identities = 31/57 (54%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDP 97
PG G PG G G +G G PG L G QG PG GPPG G G+ GPKG KGDP
Sbjct: 1023 PGPPGPPGPPGSTGLRGFIGFPG--LPGDQGEPGSPGPPGFSGIDGARGPKGNKGDP 1077
Score = 57.0 bits (136), Expect = 1e-08
Identities = 32/70 (45%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Query: 42 GINGFPGKDGRDGTKGEKGEPG-------QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQK 94
G G PGK G G G KG G +G +G +GP G G PG PG G G G+K
Sbjct: 536 GPPGLPGKHGASGPPGNKGAKGDMVVSRVKGHKGERGPDGPPGFPGQPGSHGRDGHAGEK 595
Query: 95 GDPGKSPDGD 104
GDPG P GD
Sbjct: 596 GDPG--PPGD 603
Score = 56.2 bits (134), Expect = 3e-08
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 24/91 (26%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPS--------------- 85
PG G G G+ G G KG PG G++G G PG++G G+PGP+
Sbjct: 213 PGEPGLVGPPGQPGRPGLKGNPGVGVKGQMGDPGEVGQQGSPGPTLLVEPPDFCLYKGEK 272
Query: 86 ---------GSPGPKGQKGDPGKSPDGDSSL 107
G PGP G+KG+ G G+ +
Sbjct: 273 GIKGIPGMVGLPGPPGRKGESGIGAKGEKGI 303
Score = 55.5 bits (132), Expect = 4e-08
Identities = 30/67 (44%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQGL-RGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGKS 100
G+ G G++G G G G PG RG G PG+ G PG PG G+PG KGQ GD G
Sbjct: 804 GLKGPKGREGHAGFPGVPGPPGHSCERGAPGIPGQPGLPGYPGSPGAPGGKGQPGDVG-- 861
Query: 101 PDGDSSL 107
P G + +
Sbjct: 862 PPGPAGM 868
Score = 55.5 bits (132), Expect = 4e-08
Identities = 29/58 (50%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
G G PG G +G G PGQ GL G G PG G G PG G PGP G KG PG
Sbjct: 816 GFPGVPGPPGHSCERGAPGIPGQPGLPGYPGSPGAPGGKGQPGDVGPPGPAGMKGLPG 873
Score = 55.5 bits (132), Expect = 4e-08
Identities = 32/72 (44%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGKS 100
PG+ G PG G DG G G G RGL G PG G G PG G PG KG+ G+ G S
Sbjct: 884 PGLPGIPGPFGDDGLPGPPGPKGP--RGLPGFPGFPGERGKPGAEGCPGAKGEPGEKGMS 941
Query: 101 P-DGDSSLAASE 111
GD L ++
Sbjct: 942 GLPGDRGLRGAK 953
Score = 55.1 bits (131), Expect = 6e-08
Identities = 31/61 (50%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 39 SSPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGP---KGQKG 95
++PG GFPG G G G G PG G GPPG+ G PG PG G GP KGQKG
Sbjct: 607 ATPGGKGFPGPLGPPGKAGPVGPPGLGF---PGPPGERGHPGVPGHPGVRGPDGLKGQKG 663
Query: 96 D 96
D
Sbjct: 664 D 664
Score = 54.3 bits (129), Expect = 1e-07
Identities = 31/67 (46%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 42 GINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGKS 100
G+ G G G G KG+KG G G GL G PG GPPG G G G G +GDPG
Sbjct: 92 GMRGDRGPPGAAGDKGDKGPTGVPGFPGLDGIPGHPGPPGPRGKPGMSGHNGSRGDPG-F 150
Query: 101 PDGDSSL 107
P G +L
Sbjct: 151 PGGRGAL 157
Score = 53.5 bits (127), Expect = 2e-07
Identities = 33/87 (37%), Positives = 37/87 (42%), Gaps = 23/87 (26%)
Query: 39 SSPGINGFPGKDGRDGTKGEKGEPG-------------QGLRGLQGPPGKLGPPG----- 80
S+PG G PG G G G +G PG QG++G GPPG GP G
Sbjct: 430 SAPGKPGKPGSPGLPGAPGLQGLPGSSVIYCSVGNPGPQGIKGKVGPPGGRGPKGEKGNE 489
Query: 81 -----NPGPSGSPGPKGQKGDPGKSPD 102
PGP G PGP G G G D
Sbjct: 490 GLCACEPGPMGPPGPPGLPGRQGSKGD 516
Score = 53.5 bits (127), Expect = 2e-07
Identities = 35/76 (46%), Positives = 42/76 (55%), Gaps = 13/76 (17%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG-QGLRGLQ--GPPGKLGPP------GNPGPSG--SPG 89
PGI G G G +G G KG+ G +G GL GPPG +G P G+PG G PG
Sbjct: 1165 PGIKGPSGSPGLNGLHGLKGQKGTKGASGLHDVGPPGPVGIPGLKGERGDPGSPGISPPG 1224
Query: 90 PKGQKGDPGKSPDGDS 105
P+G+KG PG P G S
Sbjct: 1225 PRGKKGPPG--PPGSS 1238
Score = 53.5 bits (127), Expect = 2e-07
Identities = 29/68 (42%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 32 CPAVIACSSPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPK 91
CP + PG+ G PG G +G G G G G +G PG G G G GSPGP
Sbjct: 1375 CPRI-----PGLPGAPGMRGPEGAMGLPGMRGPSGPGCKGEPGLDGRRGVDGVPGSPGPP 1429
Query: 92 GQKGDPGK 99
G+KGD G+
Sbjct: 1430 GRKGDTGE 1437
Score = 53.1 bits (126), Expect = 2e-07
Identities = 32/77 (41%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 42 GINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG-K 99
G G PG G DG G G PG +G G+ G G G PG PG G+ GP G G PG K
Sbjct: 110 GPTGVPGFPGLDGIPGHPGPPGPRGKPGMSGHNGSRGDPGFPGGRGALGPGGPLGHPGEK 169
Query: 100 SPDGDSSLAASERKALQ 116
G+S K +Q
Sbjct: 170 GEKGNSVFILGAVKGIQ 186
Score = 53.1 bits (126), Expect = 2e-07
Identities = 33/87 (37%), Positives = 42/87 (48%), Gaps = 24/87 (27%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLG--------------------PP 79
PG+ G PG+ G G +G +G+PG G G++GP G G
Sbjct: 1138 PGLRGQPGEMGDPGPRGLQGDPGIPGPPGIKGPSGSPGLNGLHGLKGQKGTKGASGLHDV 1197
Query: 80 GNPGPSGSPGPKGQKGDPGK---SPDG 103
G PGP G PG KG++GDPG SP G
Sbjct: 1198 GPPGPVGIPGLKGERGDPGSPGISPPG 1224
Score = 52.8 bits (125), Expect = 3e-07
Identities = 28/63 (44%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPG----QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKG 95
S G+ GF G G G +GE G PG G+ G +GP G G P + G PGPKG+ G
Sbjct: 1034 STGLRGFIGFPGLPGDQGEPGSPGPPGFSGIDGARGPKGNKGDPAS--HFGPPGPKGEPG 1091
Query: 96 DPG 98
PG
Sbjct: 1092 SPG 1094
Score = 52.4 bits (124), Expect = 4e-07
Identities = 29/76 (38%), Positives = 35/76 (46%), Gaps = 7/76 (9%)
Query: 30 KTCPAVIACSSPGINGFPGKDGRDGTKGEKGEPG-------QGLRGLQGPPGKLGPPGNP 82
+ C G G PG G G G G PG +G+RG +GPPG G G+
Sbjct: 50 RDCSVCHCVPEKGSRGPPGPPGPQGPIGPLGAPGPIGLSGEKGMRGDRGPPGAAGDKGDK 109
Query: 83 GPSGSPGPKGQKGDPG 98
GP+G PG G G PG
Sbjct: 110 GPTGVPGFPGLDGIPG 125
Score = 52.4 bits (124), Expect = 4e-07
Identities = 27/57 (47%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGD 96
PG++G PG G G +G+ G G G RG G PG G G GP G PG KG+KG+
Sbjct: 118 PGLDGIPGHPGPPGPRGKPGMSGHNGSRGDPGFPGGRGALGPGGPLGHPGEKGEKGN 174
Score = 52.4 bits (124), Expect = 4e-07
Identities = 37/97 (38%), Positives = 44/97 (45%), Gaps = 26/97 (26%)
Query: 34 AVIACS--SPGINGFPGKDGRDGTKGEKGEPG-----------------------QGLRG 68
+VI CS +PG G GK G G +G KGE G QG +G
Sbjct: 456 SVIYCSVGNPGPQGIKGKVGPPGGRGPKGEKGNEGLCACEPGPMGPPGPPGLPGRQGSKG 515
Query: 69 LQGPPGKLGPPGNPGPSGSPGPKGQKGDPGKS-PDGD 104
G PG LG G+PGP G+ GP G G G S P G+
Sbjct: 516 DLGLPGWLGTKGDPGPPGAEGPPGLPGKHGASGPPGN 552
Score = 51.6 bits (122), Expect = 6e-07
Identities = 28/66 (42%), Positives = 35/66 (53%), Gaps = 10/66 (15%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGS--------PGPKG 92
PG G PG G +G++G+ G PG RG GP G LG PG G G+ G +G
Sbjct: 130 PGPRGKPGMSGHNGSRGDPGFPGG--RGALGPGGPLGHPGEKGEKGNSVFILGAVKGIQG 187
Query: 93 QKGDPG 98
+GDPG
Sbjct: 188 DRGDPG 193
Score = 51.6 bits (122), Expect = 6e-07
Identities = 29/74 (39%), Positives = 34/74 (45%), Gaps = 16/74 (21%)
Query: 41 PGINGFPGKDGRDGTKGEK------GEPGQGLRGLQGPPGKLGPPGNPG----------P 84
PG GFPG+ G G G G PG+ G+ GPPG G PG PG P
Sbjct: 369 PGDPGFPGRYGETGDVGPPGPPGLLGRPGEACAGMIGPPGPQGFPGLPGLPGEAGIPGRP 428
Query: 85 SGSPGPKGQKGDPG 98
+PG G+ G PG
Sbjct: 429 DSAPGKPGKPGSPG 442
Score = 51.6 bits (122), Expect = 6e-07
Identities = 38/107 (35%), Positives = 42/107 (39%), Gaps = 33/107 (30%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ-------GLRGLQGPPG-----------KLGPPGNP 82
PG G PG G DG KG G PG G RG G PG GPPG+P
Sbjct: 691 PGPQGAPGLSGSDGHKGRPGTPGTAEIPGPPGFRGDMGDPGFGGEKGSSPVGPPGPPGSP 750
Query: 83 GPSGS--------------PGPKGQKGDPG-KSPDGDSSLAASERKA 114
G +G PG +G G PG K P GD +E A
Sbjct: 751 GVNGQKGIPGDPAFGHLGPPGKRGLSGVPGIKGPRGDPGCPGAEGPA 797
Score = 51.2 bits (121), Expect = 8e-07
Identities = 32/73 (43%), Positives = 37/73 (50%), Gaps = 16/73 (21%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG----QGLRGLQGP--------PGKLGPP---GNPGPS 85
PG+ GFPG G G G G PG GL+G +G PG+ GPP G PGP
Sbjct: 630 PGL-GFPGPPGERGHPGVPGHPGVRGPDGLKGQKGDTISCNVTYPGRHGPPGFDGPPGPK 688
Query: 86 GSPGPKGQKGDPG 98
G PGP+G G G
Sbjct: 689 GFPGPQGAPGLSG 701
Score = 51.2 bits (121), Expect = 8e-07
Identities = 31/69 (44%), Positives = 34/69 (49%), Gaps = 10/69 (14%)
Query: 45 GFPGKDGRDGTKGEKGEPGQ---------GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKG 95
G PG G G G+KG PG G RGL G PG GP G+PG G+ GP G G
Sbjct: 742 GPPGPPGSPGVNGQKGIPGDPAFGHLGPPGKRGLSGVPGIKGPRGDPGCPGAEGPAGIPG 801
Query: 96 DPG-KSPDG 103
G K P G
Sbjct: 802 FLGLKGPKG 810
Score = 51.2 bits (121), Expect = 8e-07
Identities = 30/79 (37%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Query: 33 PAVIACSSPGINGFPGKDGRDGTKGEKGEPGQGLRGLQ--GPPGKLGPPGNPGPSGSPGP 90
P + G G PG G G G G G+ + + GPPG GPPG GP G+PGP
Sbjct: 1218 PGISPPGPRGKKGPPGPPGSSGPPGPAGATGRAPKDIPDPGPPGDQGPPGPDGPRGAPGP 1277
Query: 91 KGQKG--DPGKSPDGDSSL 107
G G D + GD L
Sbjct: 1278 PGLPGSVDLLRGEPGDCGL 1296
Score = 50.4 bits (119), Expect = 1e-06
Identities = 29/64 (45%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPGQ----GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKG 95
SPG+NG G G D G G PG+ G+ G++GP G G PG GP+G PG G KG
Sbjct: 749 SPGVNGQKGIPG-DPAFGHLGPPGKRGLSGVPGIKGPRGDPGCPGAEGPAGIPGFLGLKG 807
Query: 96 DPGK 99
G+
Sbjct: 808 PKGR 811
Score = 49.7 bits (117), Expect = 2e-06
Identities = 33/76 (43%), Positives = 37/76 (48%), Gaps = 15/76 (19%)
Query: 41 PGINGFPGKDGRDG---------TKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGS--- 87
PG G PG+ G G TKG+ G PG +G GL G G GPPGN G G
Sbjct: 502 PGPPGLPGRQGSKGDLGLPGWLGTKGDPGPPGAEGPPGLPGKHGASGPPGNKGAKGDMVV 561
Query: 88 PGPKGQKGDPGKSPDG 103
KG KG+ G PDG
Sbjct: 562 SRVKGHKGERG--PDG 575
Score = 48.5 bits (114), Expect = 5e-06
Identities = 32/75 (42%), Positives = 37/75 (49%), Gaps = 8/75 (10%)
Query: 29 QKTCPAVIACSSPGINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGP------PGN 81
+K + AC PG G PG G G +G KG+ G G G +G PG G PG
Sbjct: 485 EKGNEGLCACE-PGPMGPPGPPGLPGRQGSKGDLGLPGWLGTKGDPGPPGAEGPPGLPGK 543
Query: 82 PGPSGSPGPKGQKGD 96
G SG PG KG KGD
Sbjct: 544 HGASGPPGNKGAKGD 558
Score = 48.5 bits (114), Expect = 5e-06
Identities = 28/73 (38%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 33 PAVIACSSPGINGFPGKDGRDGTKGEKGEPGQ-------GLRGLQGPPGKLGPPGNPGPS 85
PA PG G G G G +G+ G PG G GL+GP G+ G G PG
Sbjct: 762 PAFGHLGPPGKRGLSGVPGIKGPRGDPGCPGAEGPAGIPGFLGLKGPKGREGHAGFPGVP 821
Query: 86 GSPGPKGQKGDPG 98
G PG ++G PG
Sbjct: 822 GPPGHSCERGAPG 834
Score = 48.1 bits (113), Expect = 7e-06
Identities = 28/65 (43%), Positives = 33/65 (50%), Gaps = 6/65 (9%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGL------RGLQGPPGKLGPPGNPGPSGSPGPKGQK 94
PG G G G G GEKGE G + +G+QG G G PG PG G+ GP G
Sbjct: 151 PGGRGALGPGGPLGHPGEKGEKGNSVFILGAVKGIQGDRGDPGLPGLPGSWGAGGPAGPT 210
Query: 95 GDPGK 99
G PG+
Sbjct: 211 GYPGE 215
Score = 47.4 bits (111), Expect = 1e-05
Identities = 33/77 (42%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 41 PGINGFPGK-DGRDGTKGEKGEPG-QGLRGLQGPPGK---LGPPGNPGPSGSPGPKGQKG 95
PG G PG+ D G G+ G PG G GLQG PG GNPGP G G G G
Sbjct: 419 PGEAGIPGRPDSAPGKPGKPGSPGLPGAPGLQGLPGSSVIYCSVGNPGPQGIKGKVGPPG 478
Query: 96 DPG-KSPDGDSSLAASE 111
G K G+ L A E
Sbjct: 479 GRGPKGEKGNEGLCACE 495
Score = 47.0 bits (110), Expect = 2e-05
Identities = 28/74 (37%), Positives = 34/74 (45%), Gaps = 15/74 (20%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPGQ---------------GLRGLQGPPGKLGPPGNPGP 84
S G GFPG G G G G PG+ G++G +G PG G PG+ G
Sbjct: 144 SRGDPGFPGGRGALGPGGPLGHPGEKGEKGNSVFILGAVKGIQGDRGDPGLPGLPGSWGA 203
Query: 85 SGSPGPKGQKGDPG 98
G GP G G+PG
Sbjct: 204 GGPAGPTGYPGEPG 217
Score = 47.0 bits (110), Expect = 2e-05
Identities = 29/77 (37%), Positives = 35/77 (45%), Gaps = 18/77 (23%)
Query: 45 GFPGKDGRDGT-----------KGEKGEPG----QGLRGLQGPPGKLGPPGNPG---PSG 86
G PG+ G G +G++G+PG G G GP G G PG PG P G
Sbjct: 164 GHPGEKGEKGNSVFILGAVKGIQGDRGDPGLPGLPGSWGAGGPAGPTGYPGEPGLVGPPG 223
Query: 87 SPGPKGQKGDPGKSPDG 103
PG G KG+PG G
Sbjct: 224 QPGRPGLKGNPGVGVKG 240
Score = 47.0 bits (110), Expect = 2e-05
Identities = 34/90 (37%), Positives = 38/90 (42%), Gaps = 27/90 (30%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG----------QGLRGLQGPPGKL--------GPPGNP 82
PG G PG G G G G+PG G RG GPPG L GPPG+P
Sbjct: 313 PGSYGSPGFPGLKGELGLVGDPGLFGLIGPKGDPGNRGHPGPPGVLVTPPLPLKGPPGDP 372
Query: 83 G---------PSGSPGPKGQKGDPGKSPDG 103
G G PGP G G PG++ G
Sbjct: 373 GFPGRYGETGDVGPPGPPGLLGRPGEACAG 402
Score = 47.0 bits (110), Expect = 2e-05
Identities = 31/76 (40%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Query: 33 PAVIACSSPGINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGK-----LGPPGNPGPSG 86
P V+ + G PG G G GE G+ G G GL G PG+ +GPPG G G
Sbjct: 355 PGVLVTPPLPLKGPPGDPGFPGRYGETGDVGPPGPPGLLGRPGEACAGMIGPPGPQGFPG 414
Query: 87 SPGPKGQKGDPGKSPD 102
PG G+ G PG+ PD
Sbjct: 415 LPGLPGEAGIPGR-PD 429
Score = 46.6 bits (109), Expect = 2e-05
Identities = 28/67 (41%), Positives = 32/67 (47%), Gaps = 19/67 (28%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSP--------GPKG 92
PG+ G PG G G G G PG+ PG +GPPG PG P G KG
Sbjct: 192 PGLPGLPGSWGAGGPAGPTGYPGE--------PGLVGPPGQPG---RPGLKGNPGVGVKG 240
Query: 93 QKGDPGK 99
Q GDPG+
Sbjct: 241 QMGDPGE 247
Score = 44.3 bits (103), Expect = 1e-04
Identities = 23/47 (48%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 56 KGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGKSPD 102
KG +G PG G QGP G LG PG G SG G +G +G PG + D
Sbjct: 61 KGSRGPPGPP--GPQGPIGPLGAPGPIGLSGEKGMRGDRGPPGAAGD 105
Score = 42.7 bits (99), Expect = 3e-04
Identities = 20/46 (43%), Positives = 26/46 (56%)
Query: 67 RGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGKSPDGDSSLAASER 112
+G +GPPG GP G GP G+PGP G G+ G D AA ++
Sbjct: 61 KGSRGPPGPPGPQGPIGPLGAPGPIGLSGEKGMRGDRGPPGAAGDK 106
>gi|55743096 collagen, type XIV, alpha 1 [Homo sapiens]
Length = 1796
Score = 73.9 bits (180), Expect = 1e-13
Identities = 37/70 (52%), Positives = 43/70 (61%), Gaps = 6/70 (8%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGP-----PGNPGPSGSPGPKGQKGD 96
G+ G PG+ G G KGEKG PG G +G +GPPG GP PG+PGP GSPGP+G G
Sbjct: 1684 GVPGTPGERGLTGIKGEKGNPGVGTQGPRGPPGPAGPSGESRPGSPGPPGSPGPRGPPGH 1743
Query: 97 PG-KSPDGDS 105
G P G S
Sbjct: 1744 LGVPGPQGPS 1753
Score = 58.9 bits (141), Expect = 4e-09
Identities = 31/61 (50%), Positives = 38/61 (62%), Gaps = 4/61 (6%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGP---SGSPGPKGQKGDP 97
GI G G GRDG+ G++G PG+ G G GPPG +G PG PG +GS GP+G G P
Sbjct: 1536 GIPGGVGSPGRDGSPGQRGLPGKDGSSGPPGPPGPIGIPGTPGVPGITGSMGPQGALGPP 1595
Query: 98 G 98
G
Sbjct: 1596 G 1596
Score = 58.2 bits (139), Expect = 7e-09
Identities = 29/60 (48%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
SPG G PGKDG G G G G G G+ G G +GP G GP G PG KG++G+ G
Sbjct: 1549 SPGQRGLPGKDGSSGPPGPPGPIGIPGTPGVPGITGSMGPQGALGPPGVPGAKGERGERG 1608
Score = 56.6 bits (135), Expect = 2e-08
Identities = 29/61 (47%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 43 INGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGKSPD 102
+ G PG+ GR G+ G GE QG G G PG G PG PG G G KG+KG+PG
Sbjct: 1652 VQGPPGEPGRPGSPGAPGE--QGPPGTPGFPGNAGVPGTPGERGLTGIKGEKGNPGVGTQ 1709
Query: 103 G 103
G
Sbjct: 1710 G 1710
Score = 53.5 bits (127), Expect = 2e-07
Identities = 33/82 (40%), Positives = 34/82 (41%), Gaps = 17/82 (20%)
Query: 39 SSPGINGFPGKDGRDGTKGEKGEPGQ----------------GLRGLQGPPGKLGPPGNP 82
S I G PG G G KG+ G PG G RGL G G GPPG P
Sbjct: 1509 SGLSIQGMPGMPGEKGEKGDTGLPGPQGIPGGVGSPGRDGSPGQRGLPGKDGSSGPPGPP 1568
Query: 83 GPSGSPGPKGQKGDPGK-SPDG 103
GP G PG G G G P G
Sbjct: 1569 GPIGIPGTPGVPGITGSMGPQG 1590
Score = 49.7 bits (117), Expect = 2e-06
Identities = 34/88 (38%), Positives = 39/88 (44%), Gaps = 26/88 (29%)
Query: 42 GINGFPGKDGRDGTKGEKGEPG---------------QGLRGLQGPPGKLGPPGNPGPSG 86
G G PG G DG +GE G PG QG+ G+ G G+ G G PGP G
Sbjct: 1477 GQQGEPGPKGPDGPRGEIGLPGPQGPPGPQGPSGLSIQGMPGMPGEKGEKGDTGLPGPQG 1536
Query: 87 SP---------GPKGQKGDPGKSPDGDS 105
P G GQ+G PGK DG S
Sbjct: 1537 IPGGVGSPGRDGSPGQRGLPGK--DGSS 1562
Score = 47.0 bits (110), Expect = 2e-05
Identities = 31/80 (38%), Positives = 37/80 (46%), Gaps = 20/80 (25%)
Query: 24 TCEDAQKTCPAVIACSSP-----GINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGP 78
+C D +C +CS G G PG G G KG++GEPG P G GP
Sbjct: 1443 SCPDLPHSC----SCSETNEVALGPAGPPGGPGLRGPKGQQGEPG--------PKGPDGP 1490
Query: 79 PGN---PGPSGSPGPKGQKG 95
G PGP G PGP+G G
Sbjct: 1491 RGEIGLPGPQGPPGPQGPSG 1510
Score = 44.7 bits (104), Expect = 8e-05
Identities = 30/99 (30%), Positives = 36/99 (36%), Gaps = 38/99 (38%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPGQ----------------------------------- 64
S G G G G G KGE+GE G
Sbjct: 1585 SMGPQGALGPPGVPGAKGERGERGDLQSQAMVRSVARQVCEQLIQSHMARYTAILNQIPS 1644
Query: 65 ---GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGKS 100
+R +QGPPG+ G PG+PG G GP G G PG +
Sbjct: 1645 HSSSIRTVQGPPGEPGRPGSPGAPGEQGPPGTPGFPGNA 1683
Score = 43.9 bits (102), Expect = 1e-04
Identities = 23/48 (47%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 54 GTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGKS 100
G G G PG +G +G QG PG GP G G G PGP+G G G S
Sbjct: 1462 GPAGPPGGPGLRGPKGQQGEPGPKGPDGPRGEIGLPGPQGPPGPQGPS 1509
Score = 41.2 bits (95), Expect = 8e-04
Identities = 19/29 (65%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Query: 76 LGPPGNPGPSGSPGPKGQKGDPG-KSPDG 103
LGP G PG G GPKGQ+G+PG K PDG
Sbjct: 1461 LGPAGPPGGPGLRGPKGQQGEPGPKGPDG 1489
Score = 39.3 bits (90), Expect = 0.003
Identities = 24/58 (41%), Positives = 27/58 (46%), Gaps = 7/58 (12%)
Query: 58 EKGEPGQGLRGLQGPPGKLGP---PGNPGPSGSPGPKGQKGDPG----KSPDGDSSLA 108
E E G G G PG GP G PGP G GP+G+ G PG P G S L+
Sbjct: 1455 ETNEVALGPAGPPGGPGLRGPKGQQGEPGPKGPDGPRGEIGLPGPQGPPGPQGPSGLS 1512
Score = 37.7 bits (86), Expect = 0.009
Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 11/51 (21%)
Query: 39 SSPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPG 89
+ P PG G G+ G + GPPG LG PG GPSG PG
Sbjct: 1718 AGPSGESRPGSPGPPGSPGPR-----------GPPGHLGVPGPQGPSGQPG 1757
>gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens]
Length = 1838
Score = 73.2 bits (178), Expect = 2e-13
Identities = 37/71 (52%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGKS 100
G G PG+ G G KGE+GE G+ G G GPPG GPPG+ GP GSPGP G GDPG
Sbjct: 1291 GEPGLPGEGGPPGPKGERGEKGESGPSGAAGPPGPKGPPGDDGPKGSPGPVGFPGDPG-- 1348
Query: 101 PDGDSSLAASE 111
P G+ A +
Sbjct: 1349 PPGEPGPAGQD 1359
Score = 68.6 bits (166), Expect = 5e-12
Identities = 33/62 (53%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 42 GINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGKS 100
G+ G PGK G G +G G+PG GLRG+ GP G+ G PG+PGP G PGP G G PG
Sbjct: 1414 GLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLPGSPGPDGPPGPMGPPGLPGLK 1473
Query: 101 PD 102
D
Sbjct: 1474 GD 1475
Score = 66.6 bits (161), Expect = 2e-11
Identities = 35/70 (50%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGKS 100
PG G PG G +G +GEKG G+ GL+GPPGK GP G G G PGP G +G PG
Sbjct: 1389 PGKRGPPGPAGPEGRQGEKGAKGEA--GLEGPPGKTGPIGPQGAPGKPGPDGLRGIPG-- 1444
Query: 101 PDGDSSLAAS 110
P G+ L S
Sbjct: 1445 PVGEQGLPGS 1454
Score = 66.6 bits (161), Expect = 2e-11
Identities = 33/73 (45%), Positives = 43/73 (58%), Gaps = 8/73 (10%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG-------QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQ 93
PG+ G G G G KG++G PG +G +G+ GP G +GPPG PG G PGPKG
Sbjct: 1485 PGLIGLIGPPGEQGEKGDRGLPGPQGSSGPKGEQGITGPSGPIGPPGPPGLPGPPGPKGA 1544
Query: 94 KGDPGKS-PDGDS 105
KG G + P G++
Sbjct: 1545 KGSSGPTGPKGEA 1557
Score = 66.2 bits (160), Expect = 2e-11
Identities = 39/89 (43%), Positives = 45/89 (50%), Gaps = 26/89 (29%)
Query: 41 PGINGFPGKDGRDGTKG---EKGEPGQ----GLRGLQGPPGKLGP--------------- 78
PG G PGKDG G +G ++G PG GL+G +GPPG GP
Sbjct: 1041 PGPAGLPGKDGPPGLRGFPGDRGLPGPVGALGLKGNEGPPGPPGPAGSPGERGPAGAAGP 1100
Query: 79 ---PGNPGPSGSPGPKGQKGDPG-KSPDG 103
PG PGP G PGP G+KG PG K P G
Sbjct: 1101 IGIPGRPGPQGPPGPAGEKGAPGEKGPQG 1129
Score = 66.2 bits (160), Expect = 2e-11
Identities = 36/71 (50%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ-------GLRGLQGPPGKLGPPGNPGPSGSPGPKGQ 93
PG G G+DG G KG+ GEPGQ G G GPPGK GPPG GP G G KG
Sbjct: 1350 PGEPGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGPSGPPGKRGPPGPAGPEGRQGEKGA 1409
Query: 94 KGDPG-KSPDG 103
KG+ G + P G
Sbjct: 1410 KGEAGLEGPPG 1420
Score = 65.9 bits (159), Expect = 3e-11
Identities = 35/71 (49%), Positives = 41/71 (57%), Gaps = 13/71 (18%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPP------------GNPGPSGS 87
PG +G G DG G +G GEPG +GL G +GPPG GPP GN GP G
Sbjct: 657 PGDDGERGDDGEVGPRGLPGEPGPRGLLGPKGPPGPPGPPGVTGMDGQPGPKGNVGPQGE 716
Query: 88 PGPKGQKGDPG 98
PGP GQ+G+PG
Sbjct: 717 PGPPGQQGNPG 727
Score = 65.5 bits (158), Expect = 4e-11
Identities = 32/61 (52%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQ----GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDP 97
G G PGK G DG +G G G+ G G GPPG +GPPG PG G GPKG+KG P
Sbjct: 1426 GPQGAPGKPGPDGLRGIPGPVGEQGLPGSPGPDGPPGPMGPPGLPGLKGDSGPKGEKGHP 1485
Query: 98 G 98
G
Sbjct: 1486 G 1486
Score = 64.7 bits (156), Expect = 7e-11
Identities = 38/72 (52%), Positives = 43/72 (59%), Gaps = 10/72 (13%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ----GLRGLQGPPGKLGPPG---NPGPSGS---PGP 90
PG G G G DG KGE GEPGQ G +G QGPPG GP G PGPSG+ PGP
Sbjct: 1143 PGPAGPVGPPGEDGDKGEIGEPGQKGSKGDKGEQGPPGPTGPQGPIGQPGPSGADGEPGP 1202
Query: 91 KGQKGDPGKSPD 102
+GQ+G G+ D
Sbjct: 1203 RGQQGLFGQKGD 1214
Score = 63.2 bits (152), Expect = 2e-10
Identities = 34/67 (50%), Positives = 39/67 (58%), Gaps = 6/67 (8%)
Query: 42 GINGFPGKDGRDGTKGEKGEPG----QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDP 97
G+ G PG G G+ G KGEPG QG RG+QGPPG G PG G +GS G +G G
Sbjct: 565 GLTGRPGPVGPPGSGGLKGEPGDVGPQGPRGVQGPPGPAGKPGRRGRAGSDGARGMPGQT 624
Query: 98 GKSPDGD 104
G P GD
Sbjct: 625 G--PKGD 629
Score = 63.2 bits (152), Expect = 2e-10
Identities = 32/65 (49%), Positives = 38/65 (58%), Gaps = 7/65 (10%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ-------GLRGLQGPPGKLGPPGNPGPSGSPGPKGQ 93
PG G PG+ GR G+ G +G PGQ G GL G PG+ G G+PGPSG PGP G
Sbjct: 600 PGPAGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLAGLPGEKGHRGDPGPSGPPGPPGD 659
Query: 94 KGDPG 98
G+ G
Sbjct: 660 DGERG 664
Score = 63.2 bits (152), Expect = 2e-10
Identities = 31/59 (52%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
+PG G PG G G GEKG G+ GL G PG GPPG+PG G PG KG +G PG
Sbjct: 725 NPGAQGLPGPQGAIGPPGEKGPLGKP--GLPGMPGADGPPGHPGKEGPPGEKGGQGPPG 781
Score = 62.0 bits (149), Expect = 5e-10
Identities = 31/69 (44%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG- 98
PG G PG G+DG G G+ G+ G +G GPPG G G GP+G GP G++G PG
Sbjct: 960 PGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGERGHPGP 1019
Query: 99 KSPDGDSSL 107
P G+ L
Sbjct: 1020 PGPPGEQGL 1028
Score = 61.2 bits (147), Expect = 8e-10
Identities = 31/61 (50%), Positives = 39/61 (63%), Gaps = 4/61 (6%)
Query: 42 GINGFPGKDGRDGTKGEKGEPG----QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDP 97
G +GFPG G G KG++GE G +G G +GP G+ GP G+PGP G PG KG+ G P
Sbjct: 811 GEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGRGGPNGDPGPLGPPGEKGKLGVP 870
Query: 98 G 98
G
Sbjct: 871 G 871
Score = 61.2 bits (147), Expect = 8e-10
Identities = 35/71 (49%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQ-------GLRGLQGPPGKLGPPGNPGPSGSPGPKGQK 94
GI G PG G G GEKG PG+ G GLQGP G GP G GP G G KG+
Sbjct: 1102 GIPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGLQGPVGLPGPAGPVGPPGEDGDKGEI 1161
Query: 95 GDPG-KSPDGD 104
G+PG K GD
Sbjct: 1162 GEPGQKGSKGD 1172
Score = 60.5 bits (145), Expect = 1e-09
Identities = 35/78 (44%), Positives = 40/78 (51%), Gaps = 14/78 (17%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG----------QGLRGLQG---PPGKLGPPGNPGPSGS 87
PG+ G G+ G G G +GEPG QGL G QG PPG+ GP G PG G
Sbjct: 696 PGVTGMDGQPGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQGAIGPPGEKGPLGKPGLPGM 755
Query: 88 PGPKGQKGDPGK-SPDGD 104
PG G G PGK P G+
Sbjct: 756 PGADGPPGHPGKEGPPGE 773
Score = 60.5 bits (145), Expect = 1e-09
Identities = 31/63 (49%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGKS- 100
G +G PG DG G G G PG G +G PG+ G PG PG G PGPKG++G+ G+S
Sbjct: 1258 GPSGAPGADGPQGPPGGIGNPGAV--GEKGEPGEAGEPGLPGEGGPPGPKGERGEKGESG 1315
Query: 101 PDG 103
P G
Sbjct: 1316 PSG 1318
Score = 60.1 bits (144), Expect = 2e-09
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 46 FPGKDGRDGTKGEKGEPGQGLRGL--QGPPGKLGPPGNPGPSGSPGPKGQKGDPG-KSPD 102
+ G G G KG+KGEP G+ +GPPG GP G PGP G+ GP GQ GDPG + P
Sbjct: 442 YEGIGGPRGEKGQKGEPAIIEPGMLIEGPPGPEGPAGLPGPPGTMGPTGQVGDPGERGPP 501
Query: 103 GDSSLAASE 111
G L ++
Sbjct: 502 GRPGLPGAD 510
Score = 59.7 bits (143), Expect = 2e-09
Identities = 29/60 (48%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGKS 100
G+ G PG+ G G G+ G PG G RG G PG GP G PG G+PG G+KG+PG++
Sbjct: 1231 GLPGPPGEKGETGDVGQMGPPGPPGPRGPSGAPGADGPQGPPGGIGNPGAVGEKGEPGEA 1290
Score = 58.9 bits (141), Expect = 4e-09
Identities = 32/74 (43%), Positives = 39/74 (52%), Gaps = 14/74 (18%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGP------------SGSP 88
PG+ G PG DG G G++G PG+ +G QGPPG GP G PGP G+
Sbjct: 750 PGLPGMPGADGPPGHPGKEGPPGE--KGGQGPPGPQGPIGYPGPRGVKGADGIRGLKGTK 807
Query: 89 GPKGQKGDPGKSPD 102
G KG+ G PG D
Sbjct: 808 GEKGEDGFPGFKGD 821
Score = 58.9 bits (141), Expect = 4e-09
Identities = 31/61 (50%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGP---PGKLGPPGNPGPSGSPGPKGQKGDP 97
GI G PG G G G G PG+ G G QGP PG GPPG PG G PG GQ+G+
Sbjct: 925 GITGKPGPKGNSGGDGPAGPPGERGPNGPQGPTGFPGPKGPPGPPGKDGLPGHPGQRGET 984
Query: 98 G 98
G
Sbjct: 985 G 985
Score = 58.9 bits (141), Expect = 4e-09
Identities = 36/73 (49%), Positives = 41/73 (56%), Gaps = 14/73 (19%)
Query: 40 SPGINGFPGK---------DGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGN---PGPSGS 87
SPG +G PG G G KGEKG P GL GL GPPG+ G G+ PGP GS
Sbjct: 1454 SPGPDGPPGPMGPPGLPGLKGDSGPKGEKGHP--GLIGLIGPPGEQGEKGDRGLPGPQGS 1511
Query: 88 PGPKGQKGDPGKS 100
GPKG++G G S
Sbjct: 1512 SGPKGEQGITGPS 1524
Score = 58.5 bits (140), Expect = 5e-09
Identities = 34/88 (38%), Positives = 41/88 (46%), Gaps = 28/88 (31%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPG-------------QGLRGLQG--------------- 71
S G GFPG +G G +G G+PG +G RG+ G
Sbjct: 884 SIGFPGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKGNSGGDGPAG 943
Query: 72 PPGKLGPPGNPGPSGSPGPKGQKGDPGK 99
PPG+ GP G GP+G PGPKG G PGK
Sbjct: 944 PPGERGPNGPQGPTGFPGPKGPPGPPGK 971
Score = 58.5 bits (140), Expect = 5e-09
Identities = 28/58 (48%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
G+ G PG+ G G +G+ G PG G+ G QGP G+ GP G G G PGP G++G PG
Sbjct: 973 GLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGERGHPGPPGPPGEQGLPG 1030
Score = 58.2 bits (139), Expect = 7e-09
Identities = 30/58 (51%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 42 GINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
G G PG G G KGE+G G G G GPPG GPPG G GS GP G KG+ G
Sbjct: 1501 GDRGLPGPQGSSGPKGEQGITGPSGPIGPPGPPGLPGPPGPKGAKGSSGPTGPKGEAG 1558
Score = 57.8 bits (138), Expect = 9e-09
Identities = 34/78 (43%), Positives = 42/78 (53%), Gaps = 16/78 (20%)
Query: 37 ACSSPGINGFPGKDGRDGTKGEKGEPGQ----GLRGLQGPP---------GKLGPPGNP- 82
A PG G G G+ G +G +G PG GL+GL GPP G++GPPG P
Sbjct: 1196 ADGEPGPRGQQGLFGQKGDEGPRGFPGPPGPVGLQGLPGPPGEKGETGDVGQMGPPGPPG 1255
Query: 83 --GPSGSPGPKGQKGDPG 98
GPSG+PG G +G PG
Sbjct: 1256 PRGPSGAPGADGPQGPPG 1273
Score = 57.8 bits (138), Expect = 9e-09
Identities = 32/66 (48%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 42 GINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG-K 99
G G PG G DG G G PG GL+G GP G+ G PG G G PG +G+KGD G
Sbjct: 1447 GEQGLPGSPGPDGPPGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLP 1506
Query: 100 SPDGDS 105
P G S
Sbjct: 1507 GPQGSS 1512
Score = 57.0 bits (136), Expect = 1e-08
Identities = 32/69 (46%), Positives = 37/69 (53%), Gaps = 7/69 (10%)
Query: 37 ACSSPGINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGN------PGPSGSPG 89
A PG G PG DG G+ G G PG G G GP G+ GPPG+ PG +GSPG
Sbjct: 1319 AAGPPGPKGPPGDDGPKGSPGPVGFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPG 1378
Query: 90 PKGQKGDPG 98
P G+ G G
Sbjct: 1379 PTGEPGPSG 1387
Score = 56.6 bits (135), Expect = 2e-08
Identities = 32/64 (50%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 42 GINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGKS 100
G+ G G G GTKGEKGE G G +G G G G G PGP G GP+G KG G
Sbjct: 793 GVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGRGG-- 850
Query: 101 PDGD 104
P+GD
Sbjct: 851 PNGD 854
Score = 56.6 bits (135), Expect = 2e-08
Identities = 33/71 (46%), Positives = 37/71 (52%), Gaps = 11/71 (15%)
Query: 37 ACSSPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPP---------GNPGPSGS 87
A + G G PG G G GEKGEPG+ G G PG+ GPP G GPSG+
Sbjct: 1262 APGADGPQGPPGGIGNPGAVGEKGEPGEA--GEPGLPGEGGPPGPKGERGEKGESGPSGA 1319
Query: 88 PGPKGQKGDPG 98
GP G KG PG
Sbjct: 1320 AGPPGPKGPPG 1330
Score = 55.5 bits (132), Expect = 4e-08
Identities = 29/58 (50%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 42 GINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
G NG PG G G KG+ G PG G G QGP G +G PG PG +G G +G G PG
Sbjct: 850 GPNGDPGPLGPPGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGGRGTPGKPG 907
Score = 55.1 bits (131), Expect = 6e-08
Identities = 29/61 (47%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGK 99
PG G G DG G GE+G G QG G GP G GPPG G G PG +G+ G GK
Sbjct: 930 PGPKGNSGGDGPAGPPGERGPNGPQGPTGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGK 989
Query: 100 S 100
+
Sbjct: 990 T 990
Score = 54.7 bits (130), Expect = 7e-08
Identities = 34/82 (41%), Positives = 38/82 (46%), Gaps = 17/82 (20%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPG----QGLRGLQGPPGKLGPPGNPGPSGS-------- 87
S G+ G PG G G +G +G PG G RG G G G PG GP G
Sbjct: 578 SGGLKGEPGDVGPQGPRGVQGPPGPAGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLAG 637
Query: 88 -PGPKGQKGDPGKS----PDGD 104
PG KG +GDPG S P GD
Sbjct: 638 LPGEKGHRGDPGPSGPPGPPGD 659
Score = 54.7 bits (130), Expect = 7e-08
Identities = 31/65 (47%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 37 ACSSPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGK---LGPPGNPGPSGSPGPKGQ 93
A PG G GK G G G G PG G +GPPG+ GPPG GP G PGP+G
Sbjct: 737 AIGPPGEKGPLGKPGLPGMPGADGPPGH--PGKEGPPGEKGGQGPPGPQGPIGYPGPRGV 794
Query: 94 KGDPG 98
KG G
Sbjct: 795 KGADG 799
Score = 54.3 bits (129), Expect = 1e-07
Identities = 30/65 (46%), Positives = 36/65 (55%), Gaps = 7/65 (10%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ----GLRGLQGPPGKLGPPGNPGPSGSPG---PKGQ 93
PG+ G G G G GE+G PG G +GL G GK G G+PGP+G PG P G
Sbjct: 996 PGVVGPQGPTGETGPMGERGHPGPPGPPGEQGLPGLAGKEGTKGDPGPAGLPGKDGPPGL 1055
Query: 94 KGDPG 98
+G PG
Sbjct: 1056 RGFPG 1060
Score = 54.3 bits (129), Expect = 1e-07
Identities = 31/65 (47%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG----QGLRGLQGPPGKLGPPGNPGP---SGSPGPKGQ 93
PG G G G+ G G GEPG QGL G +G G G PG PGP G PGP G+
Sbjct: 1179 PGPTGPQGPIGQPGPSGADGEPGPRGQQGLFGQKGDEGPRGFPGPPGPVGLQGLPGPPGE 1238
Query: 94 KGDPG 98
KG+ G
Sbjct: 1239 KGETG 1243
Score = 54.3 bits (129), Expect = 1e-07
Identities = 28/58 (48%), Positives = 36/58 (62%), Gaps = 5/58 (8%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGK 99
G +G PG G+ G G+KG+ +G RG GPPG +G G PGP PG KG+ GD G+
Sbjct: 1195 GADGEPGPRGQQGLFGQKGD--EGPRGFPGPPGPVGLQGLPGP---PGEKGETGDVGQ 1247
Score = 50.8 bits (120), Expect = 1e-06
Identities = 30/72 (41%), Positives = 38/72 (52%), Gaps = 12/72 (16%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG-------QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQ 93
PG+ G+PG+ G G+ G G PG +G G GP G+ GP GP G GP+G
Sbjct: 870 PGLPGYPGRQGPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGP---TGPRGERGPRGI 926
Query: 94 KGDPGKSPDGDS 105
G PG P G+S
Sbjct: 927 TGKPG--PKGNS 936
Score = 50.1 bits (118), Expect = 2e-06
Identities = 26/57 (45%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 42 GINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDP 97
GI G G G G G G PG +G +G GP G G G+PGP G PGP G+ P
Sbjct: 1519 GITGPSGPIGPPGPPGLPGPPGPKGAKGSSGPTGPKGEAGHPGPPGPPGPPGEVIQP 1575
Score = 47.0 bits (110), Expect = 2e-05
Identities = 33/75 (44%), Positives = 36/75 (48%), Gaps = 10/75 (13%)
Query: 26 EDAQKTCPAVIACSSPG--INGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPG 83
E QK PA+I PG I G PG +G G G G G G G PG+ GPPG P
Sbjct: 451 EKGQKGEPAII---EPGMLIEGPPGPEGPAGLPGPPGTMGP--TGQVGDPGERGPPGRP- 504
Query: 84 PSGSPGPKGQKGDPG 98
G PG G G PG
Sbjct: 505 --GLPGADGLPGPPG 517
Score = 47.0 bits (110), Expect = 2e-05
Identities = 29/80 (36%), Positives = 34/80 (42%), Gaps = 22/80 (27%)
Query: 41 PGINGFPGKDG-------RDGTKGEKGEPG---------------QGLRGLQGPPGKLGP 78
PG +G PG G R G G+ G G Q L+GP G +G
Sbjct: 507 PGADGLPGPPGTMLMLPFRFGGGGDAGSKGPMVSAQESQAQAILQQARLALRGPAGPMGL 566
Query: 79 PGNPGPSGSPGPKGQKGDPG 98
G PGP G PG G KG+PG
Sbjct: 567 TGRPGPVGPPGSGGLKGEPG 586
Score = 46.6 bits (109), Expect = 2e-05
Identities = 28/68 (41%), Positives = 32/68 (47%), Gaps = 10/68 (14%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ----GLRGLQGPPGKLGPPGNPGPSGS------PGP 90
PG G G +G G G G+PG G +G G PG G PG GP GS PG
Sbjct: 834 PGPRGEDGPEGPKGRGGPNGDPGPLGPPGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGA 893
Query: 91 KGQKGDPG 98
G+KG G
Sbjct: 894 NGEKGGRG 901
Score = 42.4 bits (98), Expect = 4e-04
Identities = 23/50 (46%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGP 90
PG G PG G G KG G G +G G PG GPPG PG P P
Sbjct: 1530 PGPPGLPGPPGPKGAKGSSGPTGP--KGEAGHPGPPGPPGPPGEVIQPLP 1577
>gi|111118972 collagen, type XI, alpha 2 isoform 2 preproprotein [Homo
sapiens]
Length = 1650
Score = 72.8 bits (177), Expect = 3e-13
Identities = 36/64 (56%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGK 99
SPGI G PG G G +GEKGE GQ G GPPG GP G+ GP G+PGP G GDPG
Sbjct: 1134 SPGIQGEPGVKGPRGERGEKGESGQP--GEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGP 1191
Query: 100 SPDG 103
+G
Sbjct: 1192 PGEG 1195
Score = 65.5 bits (158), Expect = 4e-11
Identities = 34/65 (52%), Positives = 37/65 (56%), Gaps = 7/65 (10%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ-------GLRGLQGPPGKLGPPGNPGPSGSPGPKGQ 93
PG G G+DG G +GE GEPGQ G G GP GK GP G+PG G G KG
Sbjct: 1192 PGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGSPGSEGRQGGKGA 1251
Query: 94 KGDPG 98
KGDPG
Sbjct: 1252 KGDPG 1256
Score = 65.1 bits (157), Expect = 5e-11
Identities = 34/65 (52%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG- 98
PG G PG G DG KGE G+PGQ G +G +G G GPPG GP G PG G G+PG
Sbjct: 985 PGPAGPPGVAGEDGDKGEVGDPGQKGTKGNKGEHGPPGPPGPIGPVGQPGAAGADGEPGA 1044
Query: 99 KSPDG 103
+ P G
Sbjct: 1045 RGPQG 1049
Score = 63.9 bits (154), Expect = 1e-10
Identities = 33/65 (50%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG- 98
PG G PG G +G G G G G RG G G +GPPG PGP G PG G+KG PG
Sbjct: 907 PGTAGGPGLKGNEGPSGPPGPAGSPGERGAAGSGGPIGPPGRPGPQGPPGAAGEKGVPGE 966
Query: 99 KSPDG 103
K P G
Sbjct: 967 KGPIG 971
Score = 63.9 bits (154), Expect = 1e-10
Identities = 35/62 (56%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGN---PGPSGSPGPKGQKGDPG 98
G G PG G G KGEKG PG L GL GPPG+ G G+ PGP GSPG KG+ G PG
Sbjct: 1307 GPPGLPGLRGDAGAKGEKGHPG--LIGLIGPPGEQGEKGDRGLPGPQGSPGQKGEMGIPG 1364
Query: 99 KS 100
S
Sbjct: 1365 AS 1366
Score = 63.2 bits (152), Expect = 2e-10
Identities = 31/59 (52%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
+PG G PG G G GEKG QG GL G PG GPPG+PG G PG KG +G G
Sbjct: 567 TPGTQGLPGPQGAIGPHGEKGP--QGKPGLPGMPGSDGPPGHPGKEGPPGTKGNQGPSG 623
Score = 62.4 bits (150), Expect = 4e-10
Identities = 36/78 (46%), Positives = 39/78 (50%), Gaps = 16/78 (20%)
Query: 37 ACSSPGINGFPGKDGRDGTKGEKGEPG-QGLRGLQG---------------PPGKLGPPG 80
A PG G PGK G G G G+PG GLRGL G PPG +GPPG
Sbjct: 1251 AKGDPGAIGAPGKTGPVGPAGPAGKPGPDGLRGLPGSVGQQGRPGATGQAGPPGPVGPPG 1310
Query: 81 NPGPSGSPGPKGQKGDPG 98
PG G G KG+KG PG
Sbjct: 1311 LPGLRGDAGAKGEKGHPG 1328
Score = 61.2 bits (147), Expect = 8e-10
Identities = 30/57 (52%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
G G PG +GR G KG KG+PG G PGK GP G GP+G PGP G +G PG
Sbjct: 1235 GPAGSPGSEGRQGGKGAKGDPGA-----IGAPGKTGPVGPAGPAGKPGPDGLRGLPG 1286
Score = 60.1 bits (144), Expect = 2e-09
Identities = 32/62 (51%), Positives = 37/62 (59%), Gaps = 5/62 (8%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGN---PGPSGSPGPKGQKGDP 97
PGI G PG G DG +G KG G +G GPPG+ G PG PGP G+ GP G+KG
Sbjct: 532 PGIPGPPGVRGMDGPQGPKGSLGP--QGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPQ 589
Query: 98 GK 99
GK
Sbjct: 590 GK 591
Score = 60.1 bits (144), Expect = 2e-09
Identities = 30/61 (49%), Positives = 38/61 (62%), Gaps = 4/61 (6%)
Query: 42 GINGFPGKDGRDGTKGEKGEPG----QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDP 97
G +GFPG G G KG++GE G +G G +GP G+ GP G+PGP G G KG+ G P
Sbjct: 653 GEDGFPGFKGDIGVKGDRGEVGVPGSRGEDGPEGPKGRTGPTGDPGPPGLMGEKGKLGVP 712
Query: 98 G 98
G
Sbjct: 713 G 713
Score = 60.1 bits (144), Expect = 2e-09
Identities = 31/60 (51%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGK 99
PG G PG G G GEKG G G G+QGP G GP G PG +G G KG+ GDPG+
Sbjct: 949 PGPQGPPGAAGEKGVPGEKGPIGPTGRDGVQGPVGLPGPAGPPGVAGEDGDKGEVGDPGQ 1008
Score = 59.3 bits (142), Expect = 3e-09
Identities = 30/64 (46%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Query: 42 GINGFPGKDGRDGTKGEKGEPG-------QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQK 94
G G PG+ G G G KG PG +G+ G QGP G LGP G PGP G G G +
Sbjct: 512 GPRGLPGESGPRGLLGPKGPPGIPGPPGVRGMDGPQGPKGSLGPQGEPGPPGQQGTPGTQ 571
Query: 95 GDPG 98
G PG
Sbjct: 572 GLPG 575
Score = 59.3 bits (142), Expect = 3e-09
Identities = 35/80 (43%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNP------GPSGSPGPKGQK 94
G NGFPG G G G+ G PG G RG G GK GPPG P G +G GP G++
Sbjct: 797 GPNGFPGPKGPPGPPGKDGLPGHPGQRGEVGFQGKTGPPGPPGVVGPQGAAGETGPMGER 856
Query: 95 GDPG-KSPDGDSSLAASERK 113
G PG P G+ L + K
Sbjct: 857 GHPGPPGPPGEQGLPGTAGK 876
Score = 58.9 bits (141), Expect = 4e-09
Identities = 34/83 (40%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 37 ACSSPGINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKG 95
A G G G DG G GE+G PG QG G GP G GPPG G G PG +G+ G
Sbjct: 768 ATGKSGAKGTSGGDGPHGPPGERGLPGPQGPNGFPGPKGPPGPPGKDGLPGHPGQRGEVG 827
Query: 96 DPGKS-PDGDSSLAASERKALQT 117
GK+ P G + + A +T
Sbjct: 828 FQGKTGPPGPPGVVGPQGAAGET 850
Score = 58.5 bits (140), Expect = 5e-09
Identities = 32/74 (43%), Positives = 39/74 (52%), Gaps = 16/74 (21%)
Query: 42 GINGFPGKDGRDGTKGEKGEPG----------QGLRGLQGPPGKLGPPG------NPGPS 85
G G PG G DG +G+ GE G +GL G +GPPG GPPG GP
Sbjct: 491 GAQGLPGPPGEDGERGDDGEIGPRGLPGESGPRGLLGPKGPPGIPGPPGVRGMDGPQGPK 550
Query: 86 GSPGPKGQKGDPGK 99
GS GP+G+ G PG+
Sbjct: 551 GSLGPQGEPGPPGQ 564
Score = 58.2 bits (139), Expect = 7e-09
Identities = 34/79 (43%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 41 PGINGFPGKDGRDGTKG---EKGEPGQ----GLRGLQGPPGKLGPPGNPGPSGSPGPKGQ 93
PG G PGKDG G +G E+G PG GL+G +GP G GP G+PG G+ G G
Sbjct: 883 PGPPGAPGKDGPAGLRGFPGERGLPGTAGGPGLKGNEGPSGPPGPAGSPGERGAAGSGGP 942
Query: 94 KGDPGK-SPDGDSSLAASE 111
G PG+ P G A +
Sbjct: 943 IGPPGRPGPQGPPGAAGEK 961
Score = 57.4 bits (137), Expect = 1e-08
Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGK 99
PG+ G+PG+ G G+ G G PG G +G +G GK GP G GP+G G +G +G GK
Sbjct: 712 PGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGPRGERGPTGPRGQRGPRGATGK 771
Query: 100 S 100
S
Sbjct: 772 S 772
Score = 57.0 bits (136), Expect = 1e-08
Identities = 32/72 (44%), Positives = 36/72 (50%), Gaps = 13/72 (18%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG----------QGLRGLQG---PPGKLGPPGNPGPSGS 87
PG+ G G G G+ G +GEPG QGL G QG P G+ GP G PG G
Sbjct: 538 PGVRGMDGPQGPKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPQGKPGLPGM 597
Query: 88 PGPKGQKGDPGK 99
PG G G PGK
Sbjct: 598 PGSDGPPGHPGK 609
Score = 57.0 bits (136), Expect = 1e-08
Identities = 30/58 (51%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
G+ G G+DG +G KG G G G GL G GKLG PG PG G GPKG G PG
Sbjct: 674 GVPGSRGEDGPEGPKGRTGPTGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPG 731
Score = 57.0 bits (136), Expect = 1e-08
Identities = 29/63 (46%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQ----GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDP 97
G+ G PG G G G+ G G G RG GP G GP G PG G+ GP G+KG+P
Sbjct: 1070 GLQGLPGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEP 1129
Query: 98 GKS 100
G+S
Sbjct: 1130 GES 1132
Score = 56.6 bits (135), Expect = 2e-08
Identities = 32/78 (41%), Positives = 37/78 (47%), Gaps = 17/78 (21%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPP---------------GNPGPS 85
PG G PG G++GTKG+ G PG G GP G G P GN GPS
Sbjct: 865 PGEQGLPGTAGKEGTKGDPGPPGAP--GKDGPAGLRGFPGERGLPGTAGGPGLKGNEGPS 922
Query: 86 GSPGPKGQKGDPGKSPDG 103
G PGP G G+ G + G
Sbjct: 923 GPPGPAGSPGERGAAGSG 940
Score = 56.6 bits (135), Expect = 2e-08
Identities = 31/77 (40%), Positives = 38/77 (49%), Gaps = 12/77 (15%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG----------QGLRGLQGPPGKLGPPGNPGPSGSPGP 90
PG+ G G G G KG++G PG G+ G GP G GPPG PGP+G G
Sbjct: 1327 PGLIGLIGPPGEQGEKGDRGLPGPQGSPGQKGEMGIPGASGPIGPGGPPGLPGPAGPKGA 1386
Query: 91 KGQKGDPGKSPDGDSSL 107
KG G G P G+ +
Sbjct: 1387 KGATGPGG--PKGEKGV 1401
Score = 56.2 bits (134), Expect = 3e-08
Identities = 30/65 (46%), Positives = 36/65 (55%), Gaps = 8/65 (12%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGP------KGQK 94
PG+ G PG DG G G++G PG +G QGP G GP G PGP G G KG K
Sbjct: 592 PGLPGMPGSDGPPGHPGKEGPPGT--KGNQGPSGPQGPLGYPGPRGVKGVDGIRGLKGHK 649
Query: 95 GDPGK 99
G+ G+
Sbjct: 650 GEKGE 654
Score = 56.2 bits (134), Expect = 3e-08
Identities = 32/79 (40%), Positives = 35/79 (44%), Gaps = 16/79 (20%)
Query: 37 ACSSPGINGFPGKDGRDGTKGEKGEPGQ----------------GLRGLQGPPGKLGPPG 80
A G G GK G G +G G GQ G G GPPG+ G PG
Sbjct: 735 ASGEKGARGLSGKSGPRGERGPTGPRGQRGPRGATGKSGAKGTSGGDGPHGPPGERGLPG 794
Query: 81 NPGPSGSPGPKGQKGDPGK 99
GP+G PGPKG G PGK
Sbjct: 795 PQGPNGFPGPKGPPGPPGK 813
Score = 55.8 bits (133), Expect = 3e-08
Identities = 32/71 (45%), Positives = 34/71 (47%), Gaps = 13/71 (18%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGP------------PGNPGPSGS 87
PG G PG G G G KG PG G G GPPG+ GP G PG GS
Sbjct: 1159 PGEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGS 1218
Query: 88 PGPKGQKGDPG 98
PGP G+ G PG
Sbjct: 1219 PGPTGENGPPG 1229
Score = 55.5 bits (132), Expect = 4e-08
Identities = 30/66 (45%), Positives = 37/66 (56%), Gaps = 7/66 (10%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ----GLRGLQGPPGKLGPPGNPGPSGSPG---PKGQ 93
PG+ G G G G GE+G PG G +GL G GK G G+PGP G+PG P G
Sbjct: 838 PGVVGPQGAAGETGPMGERGHPGPPGPPGEQGLPGTAGKEGTKGDPGPPGAPGKDGPAGL 897
Query: 94 KGDPGK 99
+G PG+
Sbjct: 898 RGFPGE 903
Score = 55.1 bits (131), Expect = 6e-08
Identities = 30/62 (48%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGKS 100
G G PG G G GEKG PG+ G G G G GP G PGP+G PG G+ GD G+
Sbjct: 944 GPPGRPGPQGPPGAAGEKGVPGEKGPIGPTGRDGVQGPVGLPGPAGPPGVAGEDGDKGEV 1003
Query: 101 PD 102
D
Sbjct: 1004 GD 1005
Score = 54.7 bits (130), Expect = 7e-08
Identities = 32/70 (45%), Positives = 34/70 (48%), Gaps = 12/70 (17%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG--- 98
G G PG G G GEKGEPG+ G PG G PG GP G G KG+ G PG
Sbjct: 1109 GPQGPPGGVGNLGPPGEKGEPGES-----GSPGIQGEPGVKGPRGERGEKGESGQPGEPG 1163
Query: 99 ----KSPDGD 104
K P GD
Sbjct: 1164 PPGPKGPTGD 1173
Score = 54.3 bits (129), Expect = 1e-07
Identities = 32/75 (42%), Positives = 37/75 (49%), Gaps = 9/75 (12%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPG----QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKG 95
SPG G G G G +G G PG QG +G +G PG +G PG GP G GP G+ G
Sbjct: 1218 SPGPTGENGPPGPLGKRGPAGSPGSEGRQGGKGAKGDPGAIGAPGKTGPVGPAGPAGKPG 1277
Query: 96 DPGKSPDGDSSLAAS 110
PDG L S
Sbjct: 1278 -----PDGLRGLPGS 1287
Score = 53.9 bits (128), Expect = 1e-07
Identities = 30/70 (42%), Positives = 37/70 (52%), Gaps = 13/70 (18%)
Query: 42 GINGFPGKDGRDGTKGEKGEPG-------QGLRGLQGPPGKLGPPGNPGP------SGSP 88
G+ G PG+ G G +G+ G PG QG G GP G+ G PG PGP G+
Sbjct: 815 GLPGHPGQRGEVGFQGKTGPPGPPGVVGPQGAAGETGPMGERGHPGPPGPPGEQGLPGTA 874
Query: 89 GPKGQKGDPG 98
G +G KGDPG
Sbjct: 875 GKEGTKGDPG 884
Score = 53.5 bits (127), Expect = 2e-07
Identities = 29/67 (43%), Positives = 37/67 (55%), Gaps = 10/67 (14%)
Query: 42 GINGFPGKDGR------DGTKGEKGEPG----QGLRGLQGPPGKLGPPGNPGPSGSPGPK 91
G+ G PGK GR DG +G G+PG +G GL G PG+ G G+ G G PGP
Sbjct: 440 GLTGPPGKAGRRGRAGADGARGMPGDPGVKGDRGFDGLPGLPGEKGHRGDTGAQGLPGPP 499
Query: 92 GQKGDPG 98
G+ G+ G
Sbjct: 500 GEDGERG 506
Score = 53.1 bits (126), Expect = 2e-07
Identities = 28/57 (49%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
G G GK G GT G G+ G G +G PG GP G PGP G PGP G+ G PG
Sbjct: 764 GPRGATGKSGAKGTSG--GDGPHGPPGERGLPGPQGPNGFPGPKGPPGPPGKDGLPG 818
Score = 53.1 bits (126), Expect = 2e-07
Identities = 31/69 (44%), Positives = 36/69 (52%), Gaps = 9/69 (13%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSP------GPKGQKG 95
G +G PG G G G KG+ +G RG GPPG +G G PGPSG GP G G
Sbjct: 1037 GADGEPGARGPQGHFGAKGD--EGTRGFNGPPGPIGLQGLPGPSGEKGETGDVGPMGPPG 1094
Query: 96 DPG-KSPDG 103
PG + P G
Sbjct: 1095 PPGPRGPAG 1103
Score = 52.8 bits (125), Expect = 3e-07
Identities = 29/58 (50%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 42 GINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
G G PG G G KG+ G PG G G QGP G LG PG PG SG G +G G G
Sbjct: 692 GPTGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSG 749
Score = 52.8 bits (125), Expect = 3e-07
Identities = 31/71 (43%), Positives = 33/71 (46%), Gaps = 8/71 (11%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQ-------GLRGLQGPPGKLGPPGNPGPSGSPGPKGQK 94
G G PG G G KGE G PG G GL GP G G G GP G G KG +
Sbjct: 1343 GDRGLPGPQGSPGQKGEMGIPGASGPIGPGGPPGLPGPAGPKGAKGATGPGGPKGEKGVQ 1402
Query: 95 GDPG-KSPDGD 104
G PG P G+
Sbjct: 1403 GPPGHPGPPGE 1413
Score = 52.4 bits (124), Expect = 4e-07
Identities = 29/65 (44%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGP---SGSPGPKGQKGDP 97
G G PG G+ G+ G KGE G G +G +GP G GPPG G +G+ G +G GDP
Sbjct: 407 GYTGRPGPLGQPGSPGLKGESGDLGPQGPRGPQGLTGPPGKAGRRGRAGADGARGMPGDP 466
Query: 98 GKSPD 102
G D
Sbjct: 467 GVKGD 471
Score = 52.0 bits (123), Expect = 5e-07
Identities = 34/82 (41%), Positives = 41/82 (50%), Gaps = 22/82 (26%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG-------QGLRGLQGPPG---KLGPPGN---PGPSGS 87
PG +G G+ G G G G PG G G QGPPG LGPPG PG SGS
Sbjct: 1075 PGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGS 1134
Query: 88 PG---------PKGQKGDPGKS 100
PG P+G++G+ G+S
Sbjct: 1135 PGIQGEPGVKGPRGERGEKGES 1156
Score = 51.6 bits (122), Expect = 6e-07
Identities = 28/59 (47%), Positives = 32/59 (54%), Gaps = 11/59 (18%)
Query: 51 GRDGTKGEKGEPG--------QGLRGLQGPPGKLGPP---GNPGPSGSPGPKGQKGDPG 98
G G KGEKGEP +G G +GP G +GPP GNPGP G PG +G G G
Sbjct: 291 GPRGLKGEKGEPAVLEPGMLVEGPPGPEGPAGLIGPPGIQGNPGPVGDPGERGPPGRAG 349
Score = 51.6 bits (122), Expect = 6e-07
Identities = 31/68 (45%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ----GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGD 96
PG G G DG G KG KGE G+ G +G G G G G PG G GP+G KG
Sbjct: 631 PGPRGVKGVDGIRGLKGHKGEKGEDGFPGFKGDIGVKGDRGEVGVPGSRGEDGPEGPKGR 690
Query: 97 PGKSPDGD 104
G P GD
Sbjct: 691 TG--PTGD 696
Score = 50.1 bits (118), Expect = 2e-06
Identities = 29/75 (38%), Positives = 36/75 (48%), Gaps = 16/75 (21%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPG----------------QGLRGLQGPPGKLGPPGNPG 83
S G G PGK+G GTKG +G G G+RGL+G G+ G G PG
Sbjct: 600 SDGPPGHPGKEGPPGTKGNQGPSGPQGPLGYPGPRGVKGVDGIRGLKGHKGEKGEDGFPG 659
Query: 84 PSGSPGPKGQKGDPG 98
G G KG +G+ G
Sbjct: 660 FKGDIGVKGDRGEVG 674
Score = 49.7 bits (117), Expect = 2e-06
Identities = 34/110 (30%), Positives = 40/110 (36%), Gaps = 36/110 (32%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLR--------------------------------G 68
PG G PG+ G G+ G G PG L
Sbjct: 339 PGERGPPGRAGLPGSDGAPGPPGTSLMLPFRFGSGGGDKGPVVAAQEAQAQAILQQARLA 398
Query: 69 LQGPPGKLGPPGNPGPSGSPGPKGQKGDPG----KSPDGDSSLAASERKA 114
L+GPPG +G G PGP G PG G KG+ G + P G L KA
Sbjct: 399 LRGPPGPMGYTGRPGPLGQPGSPGLKGESGDLGPQGPRGPQGLTGPPGKA 448
Score = 49.7 bits (117), Expect = 2e-06
Identities = 29/78 (37%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 23 VTCEDAQKTCPAVIACSSPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNP 82
V ++AQ A++ + + G PG G G G G+PG GL+G G LGP G
Sbjct: 381 VAAQEAQ--AQAILQQARLALRGPPGPMGYTGRPGPLGQPGSP--GLKGESGDLGPQGPR 436
Query: 83 GPSGSPGPKGQKGDPGKS 100
GP G GP G+ G G++
Sbjct: 437 GPQGLTGPPGKAGRRGRA 454
Score = 49.7 bits (117), Expect = 2e-06
Identities = 31/71 (43%), Positives = 34/71 (47%), Gaps = 13/71 (18%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ----GLRGLQGPP---------GKLGPPGNPGPSGS 87
PG G G G DG G GE G G +GL GPP G++GP G PG SG
Sbjct: 463 PGDPGVKGDRGFDGLPGLPGEKGHRGDTGAQGLPGPPGEDGERGDDGEIGPRGLPGESGP 522
Query: 88 PGPKGQKGDPG 98
G G KG PG
Sbjct: 523 RGLLGPKGPPG 533
Score = 49.3 bits (116), Expect = 3e-06
Identities = 28/70 (40%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ----------GLRGLQGPPGKLGPPGNPGPSGSPGP 90
PG G G +G G G G+PG G+ GL G PG+ GP G+ G G PG
Sbjct: 676 PGSRGEDGPEGPKGRTGPTGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGA 735
Query: 91 KGQKGDPGKS 100
G+KG G S
Sbjct: 736 SGEKGARGLS 745
Score = 48.5 bits (114), Expect = 5e-06
Identities = 27/63 (42%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 37 ACSSPGINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKG 95
A G G G G G GE+G PG G G +G PG G PG GP+G G G++G
Sbjct: 846 AAGETGPMGERGHPGPPGPPGEQGLPGTAGKEGTKGDPGPPGAPGKDGPAGLRGFPGERG 905
Query: 96 DPG 98
PG
Sbjct: 906 LPG 908
Score = 44.7 bits (104), Expect = 8e-05
Identities = 34/103 (33%), Positives = 36/103 (34%), Gaps = 39/103 (37%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGK------------------------ 75
PGI G PG G G +G G G G G GPPG
Sbjct: 327 PGIQGNPGPVGDPGERGPPGRAGLPGSDGAPGPPGTSLMLPFRFGSGGGDKGPVVAAQEA 386
Query: 76 -------------LGPPGNPGPSGSPGPKGQKGDPG-KSPDGD 104
GPPG G +G PGP GQ G PG K GD
Sbjct: 387 QAQAILQQARLALRGPPGPMGYTGRPGPLGQPGSPGLKGESGD 429
Score = 41.2 bits (95), Expect = 8e-04
Identities = 32/88 (36%), Positives = 38/88 (43%), Gaps = 8/88 (9%)
Query: 29 QKTCPAVIACSSP-GINGFPGKDGRDGTKGEKGEPG----QGLRGLQGPPGKLGPPGNPG 83
QK + S P G G PG G G KG KG G +G +G+QGPPG PG PG
Sbjct: 1356 QKGEMGIPGASGPIGPGGPPGLPGPAGPKGAKGATGPGGPKGEKGVQGPPGH---PGPPG 1412
Query: 84 PSGSPGPKGQKGDPGKSPDGDSSLAASE 111
P P +S DG + E
Sbjct: 1413 EVIQPLPIQMPKKTRRSVDGSRLMQEDE 1440
>gi|111118968 collagen, type XI, alpha 2 isoform 3 preproprotein [Homo
sapiens]
Length = 1629
Score = 72.8 bits (177), Expect = 3e-13
Identities = 36/64 (56%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGK 99
SPGI G PG G G +GEKGE GQ G GPPG GP G+ GP G+PGP G GDPG
Sbjct: 1113 SPGIQGEPGVKGPRGERGEKGESGQP--GEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGP 1170
Query: 100 SPDG 103
+G
Sbjct: 1171 PGEG 1174
Score = 65.5 bits (158), Expect = 4e-11
Identities = 34/65 (52%), Positives = 37/65 (56%), Gaps = 7/65 (10%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ-------GLRGLQGPPGKLGPPGNPGPSGSPGPKGQ 93
PG G G+DG G +GE GEPGQ G G GP GK GP G+PG G G KG
Sbjct: 1171 PGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGSPGSEGRQGGKGA 1230
Query: 94 KGDPG 98
KGDPG
Sbjct: 1231 KGDPG 1235
Score = 65.1 bits (157), Expect = 5e-11
Identities = 34/65 (52%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG- 98
PG G PG G DG KGE G+PGQ G +G +G G GPPG GP G PG G G+PG
Sbjct: 964 PGPAGPPGVAGEDGDKGEVGDPGQKGTKGNKGEHGPPGPPGPIGPVGQPGAAGADGEPGA 1023
Query: 99 KSPDG 103
+ P G
Sbjct: 1024 RGPQG 1028
Score = 63.9 bits (154), Expect = 1e-10
Identities = 33/65 (50%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG- 98
PG G PG G +G G G G G RG G G +GPPG PGP G PG G+KG PG
Sbjct: 886 PGTAGGPGLKGNEGPSGPPGPAGSPGERGAAGSGGPIGPPGRPGPQGPPGAAGEKGVPGE 945
Query: 99 KSPDG 103
K P G
Sbjct: 946 KGPIG 950
Score = 63.9 bits (154), Expect = 1e-10
Identities = 35/62 (56%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGN---PGPSGSPGPKGQKGDPG 98
G G PG G G KGEKG PG L GL GPPG+ G G+ PGP GSPG KG+ G PG
Sbjct: 1286 GPPGLPGLRGDAGAKGEKGHPG--LIGLIGPPGEQGEKGDRGLPGPQGSPGQKGEMGIPG 1343
Query: 99 KS 100
S
Sbjct: 1344 AS 1345
Score = 63.2 bits (152), Expect = 2e-10
Identities = 31/59 (52%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
+PG G PG G G GEKG QG GL G PG GPPG+PG G PG KG +G G
Sbjct: 546 TPGTQGLPGPQGAIGPHGEKGP--QGKPGLPGMPGSDGPPGHPGKEGPPGTKGNQGPSG 602
Score = 62.4 bits (150), Expect = 4e-10
Identities = 36/78 (46%), Positives = 39/78 (50%), Gaps = 16/78 (20%)
Query: 37 ACSSPGINGFPGKDGRDGTKGEKGEPG-QGLRGLQG---------------PPGKLGPPG 80
A PG G PGK G G G G+PG GLRGL G PPG +GPPG
Sbjct: 1230 AKGDPGAIGAPGKTGPVGPAGPAGKPGPDGLRGLPGSVGQQGRPGATGQAGPPGPVGPPG 1289
Query: 81 NPGPSGSPGPKGQKGDPG 98
PG G G KG+KG PG
Sbjct: 1290 LPGLRGDAGAKGEKGHPG 1307
Score = 61.2 bits (147), Expect = 8e-10
Identities = 30/57 (52%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
G G PG +GR G KG KG+PG G PGK GP G GP+G PGP G +G PG
Sbjct: 1214 GPAGSPGSEGRQGGKGAKGDPGA-----IGAPGKTGPVGPAGPAGKPGPDGLRGLPG 1265
Score = 60.1 bits (144), Expect = 2e-09
Identities = 32/62 (51%), Positives = 37/62 (59%), Gaps = 5/62 (8%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGN---PGPSGSPGPKGQKGDP 97
PGI G PG G DG +G KG G +G GPPG+ G PG PGP G+ GP G+KG
Sbjct: 511 PGIPGPPGVRGMDGPQGPKGSLGP--QGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPQ 568
Query: 98 GK 99
GK
Sbjct: 569 GK 570
Score = 60.1 bits (144), Expect = 2e-09
Identities = 30/61 (49%), Positives = 38/61 (62%), Gaps = 4/61 (6%)
Query: 42 GINGFPGKDGRDGTKGEKGEPG----QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDP 97
G +GFPG G G KG++GE G +G G +GP G+ GP G+PGP G G KG+ G P
Sbjct: 632 GEDGFPGFKGDIGVKGDRGEVGVPGSRGEDGPEGPKGRTGPTGDPGPPGLMGEKGKLGVP 691
Query: 98 G 98
G
Sbjct: 692 G 692
Score = 60.1 bits (144), Expect = 2e-09
Identities = 31/60 (51%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGK 99
PG G PG G G GEKG G G G+QGP G GP G PG +G G KG+ GDPG+
Sbjct: 928 PGPQGPPGAAGEKGVPGEKGPIGPTGRDGVQGPVGLPGPAGPPGVAGEDGDKGEVGDPGQ 987
Score = 59.3 bits (142), Expect = 3e-09
Identities = 30/64 (46%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Query: 42 GINGFPGKDGRDGTKGEKGEPG-------QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQK 94
G G PG+ G G G KG PG +G+ G QGP G LGP G PGP G G G +
Sbjct: 491 GPRGLPGESGPRGLLGPKGPPGIPGPPGVRGMDGPQGPKGSLGPQGEPGPPGQQGTPGTQ 550
Query: 95 GDPG 98
G PG
Sbjct: 551 GLPG 554
Score = 59.3 bits (142), Expect = 3e-09
Identities = 35/80 (43%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNP------GPSGSPGPKGQK 94
G NGFPG G G G+ G PG G RG G GK GPPG P G +G GP G++
Sbjct: 776 GPNGFPGPKGPPGPPGKDGLPGHPGQRGEVGFQGKTGPPGPPGVVGPQGAAGETGPMGER 835
Query: 95 GDPG-KSPDGDSSLAASERK 113
G PG P G+ L + K
Sbjct: 836 GHPGPPGPPGEQGLPGTAGK 855
Score = 58.9 bits (141), Expect = 4e-09
Identities = 34/83 (40%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 37 ACSSPGINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKG 95
A G G G DG G GE+G PG QG G GP G GPPG G G PG +G+ G
Sbjct: 747 ATGKSGAKGTSGGDGPHGPPGERGLPGPQGPNGFPGPKGPPGPPGKDGLPGHPGQRGEVG 806
Query: 96 DPGKS-PDGDSSLAASERKALQT 117
GK+ P G + + A +T
Sbjct: 807 FQGKTGPPGPPGVVGPQGAAGET 829
Score = 58.5 bits (140), Expect = 5e-09
Identities = 32/74 (43%), Positives = 39/74 (52%), Gaps = 16/74 (21%)
Query: 42 GINGFPGKDGRDGTKGEKGEPG----------QGLRGLQGPPGKLGPPG------NPGPS 85
G G PG G DG +G+ GE G +GL G +GPPG GPPG GP
Sbjct: 470 GAQGLPGPPGEDGERGDDGEIGPRGLPGESGPRGLLGPKGPPGIPGPPGVRGMDGPQGPK 529
Query: 86 GSPGPKGQKGDPGK 99
GS GP+G+ G PG+
Sbjct: 530 GSLGPQGEPGPPGQ 543
Score = 58.2 bits (139), Expect = 7e-09
Identities = 34/79 (43%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 41 PGINGFPGKDGRDGTKG---EKGEPGQ----GLRGLQGPPGKLGPPGNPGPSGSPGPKGQ 93
PG G PGKDG G +G E+G PG GL+G +GP G GP G+PG G+ G G
Sbjct: 862 PGPPGAPGKDGPAGLRGFPGERGLPGTAGGPGLKGNEGPSGPPGPAGSPGERGAAGSGGP 921
Query: 94 KGDPGK-SPDGDSSLAASE 111
G PG+ P G A +
Sbjct: 922 IGPPGRPGPQGPPGAAGEK 940
Score = 57.4 bits (137), Expect = 1e-08
Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGK 99
PG+ G+PG+ G G+ G G PG G +G +G GK GP G GP+G G +G +G GK
Sbjct: 691 PGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGPRGERGPTGPRGQRGPRGATGK 750
Query: 100 S 100
S
Sbjct: 751 S 751
Score = 57.0 bits (136), Expect = 1e-08
Identities = 32/72 (44%), Positives = 36/72 (50%), Gaps = 13/72 (18%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG----------QGLRGLQG---PPGKLGPPGNPGPSGS 87
PG+ G G G G+ G +GEPG QGL G QG P G+ GP G PG G
Sbjct: 517 PGVRGMDGPQGPKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPQGKPGLPGM 576
Query: 88 PGPKGQKGDPGK 99
PG G G PGK
Sbjct: 577 PGSDGPPGHPGK 588
Score = 57.0 bits (136), Expect = 1e-08
Identities = 30/58 (51%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
G+ G G+DG +G KG G G G GL G GKLG PG PG G GPKG G PG
Sbjct: 653 GVPGSRGEDGPEGPKGRTGPTGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPG 710
Score = 57.0 bits (136), Expect = 1e-08
Identities = 29/63 (46%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQ----GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDP 97
G+ G PG G G G+ G G G RG GP G GP G PG G+ GP G+KG+P
Sbjct: 1049 GLQGLPGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEP 1108
Query: 98 GKS 100
G+S
Sbjct: 1109 GES 1111
Score = 56.6 bits (135), Expect = 2e-08
Identities = 32/78 (41%), Positives = 37/78 (47%), Gaps = 17/78 (21%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPP---------------GNPGPS 85
PG G PG G++GTKG+ G PG G GP G G P GN GPS
Sbjct: 844 PGEQGLPGTAGKEGTKGDPGPPGAP--GKDGPAGLRGFPGERGLPGTAGGPGLKGNEGPS 901
Query: 86 GSPGPKGQKGDPGKSPDG 103
G PGP G G+ G + G
Sbjct: 902 GPPGPAGSPGERGAAGSG 919
Score = 56.6 bits (135), Expect = 2e-08
Identities = 31/77 (40%), Positives = 38/77 (49%), Gaps = 12/77 (15%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG----------QGLRGLQGPPGKLGPPGNPGPSGSPGP 90
PG+ G G G G KG++G PG G+ G GP G GPPG PGP+G G
Sbjct: 1306 PGLIGLIGPPGEQGEKGDRGLPGPQGSPGQKGEMGIPGASGPIGPGGPPGLPGPAGPKGA 1365
Query: 91 KGQKGDPGKSPDGDSSL 107
KG G G P G+ +
Sbjct: 1366 KGATGPGG--PKGEKGV 1380
Score = 56.2 bits (134), Expect = 3e-08
Identities = 30/65 (46%), Positives = 36/65 (55%), Gaps = 8/65 (12%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGP------KGQK 94
PG+ G PG DG G G++G PG +G QGP G GP G PGP G G KG K
Sbjct: 571 PGLPGMPGSDGPPGHPGKEGPPGT--KGNQGPSGPQGPLGYPGPRGVKGVDGIRGLKGHK 628
Query: 95 GDPGK 99
G+ G+
Sbjct: 629 GEKGE 633
Score = 56.2 bits (134), Expect = 3e-08
Identities = 32/79 (40%), Positives = 35/79 (44%), Gaps = 16/79 (20%)
Query: 37 ACSSPGINGFPGKDGRDGTKGEKGEPGQ----------------GLRGLQGPPGKLGPPG 80
A G G GK G G +G G GQ G G GPPG+ G PG
Sbjct: 714 ASGEKGARGLSGKSGPRGERGPTGPRGQRGPRGATGKSGAKGTSGGDGPHGPPGERGLPG 773
Query: 81 NPGPSGSPGPKGQKGDPGK 99
GP+G PGPKG G PGK
Sbjct: 774 PQGPNGFPGPKGPPGPPGK 792
Score = 55.8 bits (133), Expect = 3e-08
Identities = 32/71 (45%), Positives = 34/71 (47%), Gaps = 13/71 (18%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGP------------PGNPGPSGS 87
PG G PG G G G KG PG G G GPPG+ GP G PG GS
Sbjct: 1138 PGEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGS 1197
Query: 88 PGPKGQKGDPG 98
PGP G+ G PG
Sbjct: 1198 PGPTGENGPPG 1208
Score = 55.5 bits (132), Expect = 4e-08
Identities = 30/66 (45%), Positives = 37/66 (56%), Gaps = 7/66 (10%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ----GLRGLQGPPGKLGPPGNPGPSGSPG---PKGQ 93
PG+ G G G G GE+G PG G +GL G GK G G+PGP G+PG P G
Sbjct: 817 PGVVGPQGAAGETGPMGERGHPGPPGPPGEQGLPGTAGKEGTKGDPGPPGAPGKDGPAGL 876
Query: 94 KGDPGK 99
+G PG+
Sbjct: 877 RGFPGE 882
Score = 55.1 bits (131), Expect = 6e-08
Identities = 30/62 (48%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGKS 100
G G PG G G GEKG PG+ G G G G GP G PGP+G PG G+ GD G+
Sbjct: 923 GPPGRPGPQGPPGAAGEKGVPGEKGPIGPTGRDGVQGPVGLPGPAGPPGVAGEDGDKGEV 982
Query: 101 PD 102
D
Sbjct: 983 GD 984
Score = 54.7 bits (130), Expect = 7e-08
Identities = 32/70 (45%), Positives = 34/70 (48%), Gaps = 12/70 (17%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG--- 98
G G PG G G GEKGEPG+ G PG G PG GP G G KG+ G PG
Sbjct: 1088 GPQGPPGGVGNLGPPGEKGEPGES-----GSPGIQGEPGVKGPRGERGEKGESGQPGEPG 1142
Query: 99 ----KSPDGD 104
K P GD
Sbjct: 1143 PPGPKGPTGD 1152
Score = 54.3 bits (129), Expect = 1e-07
Identities = 32/75 (42%), Positives = 37/75 (49%), Gaps = 9/75 (12%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPG----QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKG 95
SPG G G G G +G G PG QG +G +G PG +G PG GP G GP G+ G
Sbjct: 1197 SPGPTGENGPPGPLGKRGPAGSPGSEGRQGGKGAKGDPGAIGAPGKTGPVGPAGPAGKPG 1256
Query: 96 DPGKSPDGDSSLAAS 110
PDG L S
Sbjct: 1257 -----PDGLRGLPGS 1266
Score = 53.9 bits (128), Expect = 1e-07
Identities = 30/70 (42%), Positives = 37/70 (52%), Gaps = 13/70 (18%)
Query: 42 GINGFPGKDGRDGTKGEKGEPG-------QGLRGLQGPPGKLGPPGNPGP------SGSP 88
G+ G PG+ G G +G+ G PG QG G GP G+ G PG PGP G+
Sbjct: 794 GLPGHPGQRGEVGFQGKTGPPGPPGVVGPQGAAGETGPMGERGHPGPPGPPGEQGLPGTA 853
Query: 89 GPKGQKGDPG 98
G +G KGDPG
Sbjct: 854 GKEGTKGDPG 863
Score = 53.5 bits (127), Expect = 2e-07
Identities = 29/67 (43%), Positives = 37/67 (55%), Gaps = 10/67 (14%)
Query: 42 GINGFPGKDGR------DGTKGEKGEPG----QGLRGLQGPPGKLGPPGNPGPSGSPGPK 91
G+ G PGK GR DG +G G+PG +G GL G PG+ G G+ G G PGP
Sbjct: 419 GLTGPPGKAGRRGRAGADGARGMPGDPGVKGDRGFDGLPGLPGEKGHRGDTGAQGLPGPP 478
Query: 92 GQKGDPG 98
G+ G+ G
Sbjct: 479 GEDGERG 485
Score = 53.1 bits (126), Expect = 2e-07
Identities = 28/57 (49%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
G G GK G GT G G+ G G +G PG GP G PGP G PGP G+ G PG
Sbjct: 743 GPRGATGKSGAKGTSG--GDGPHGPPGERGLPGPQGPNGFPGPKGPPGPPGKDGLPG 797
Score = 53.1 bits (126), Expect = 2e-07
Identities = 31/69 (44%), Positives = 36/69 (52%), Gaps = 9/69 (13%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSP------GPKGQKG 95
G +G PG G G G KG+ +G RG GPPG +G G PGPSG GP G G
Sbjct: 1016 GADGEPGARGPQGHFGAKGD--EGTRGFNGPPGPIGLQGLPGPSGEKGETGDVGPMGPPG 1073
Query: 96 DPG-KSPDG 103
PG + P G
Sbjct: 1074 PPGPRGPAG 1082
Score = 52.8 bits (125), Expect = 3e-07
Identities = 29/58 (50%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 42 GINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
G G PG G G KG+ G PG G G QGP G LG PG PG SG G +G G G
Sbjct: 671 GPTGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSG 728
Score = 52.8 bits (125), Expect = 3e-07
Identities = 31/71 (43%), Positives = 33/71 (46%), Gaps = 8/71 (11%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQ-------GLRGLQGPPGKLGPPGNPGPSGSPGPKGQK 94
G G PG G G KGE G PG G GL GP G G G GP G G KG +
Sbjct: 1322 GDRGLPGPQGSPGQKGEMGIPGASGPIGPGGPPGLPGPAGPKGAKGATGPGGPKGEKGVQ 1381
Query: 95 GDPG-KSPDGD 104
G PG P G+
Sbjct: 1382 GPPGHPGPPGE 1392
Score = 52.4 bits (124), Expect = 4e-07
Identities = 29/65 (44%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGP---SGSPGPKGQKGDP 97
G G PG G+ G+ G KGE G G +G +GP G GPPG G +G+ G +G GDP
Sbjct: 386 GYTGRPGPLGQPGSPGLKGESGDLGPQGPRGPQGLTGPPGKAGRRGRAGADGARGMPGDP 445
Query: 98 GKSPD 102
G D
Sbjct: 446 GVKGD 450
Score = 52.0 bits (123), Expect = 5e-07
Identities = 34/82 (41%), Positives = 41/82 (50%), Gaps = 22/82 (26%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG-------QGLRGLQGPPG---KLGPPGN---PGPSGS 87
PG +G G+ G G G G PG G G QGPPG LGPPG PG SGS
Sbjct: 1054 PGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGS 1113
Query: 88 PG---------PKGQKGDPGKS 100
PG P+G++G+ G+S
Sbjct: 1114 PGIQGEPGVKGPRGERGEKGES 1135
Score = 51.6 bits (122), Expect = 6e-07
Identities = 28/59 (47%), Positives = 32/59 (54%), Gaps = 11/59 (18%)
Query: 51 GRDGTKGEKGEPG--------QGLRGLQGPPGKLGPP---GNPGPSGSPGPKGQKGDPG 98
G G KGEKGEP +G G +GP G +GPP GNPGP G PG +G G G
Sbjct: 270 GPRGLKGEKGEPAVLEPGMLVEGPPGPEGPAGLIGPPGIQGNPGPVGDPGERGPPGRAG 328
Score = 51.6 bits (122), Expect = 6e-07
Identities = 31/68 (45%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ----GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGD 96
PG G G DG G KG KGE G+ G +G G G G G PG G GP+G KG
Sbjct: 610 PGPRGVKGVDGIRGLKGHKGEKGEDGFPGFKGDIGVKGDRGEVGVPGSRGEDGPEGPKGR 669
Query: 97 PGKSPDGD 104
G P GD
Sbjct: 670 TG--PTGD 675
Score = 50.1 bits (118), Expect = 2e-06
Identities = 29/75 (38%), Positives = 36/75 (48%), Gaps = 16/75 (21%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPG----------------QGLRGLQGPPGKLGPPGNPG 83
S G G PGK+G GTKG +G G G+RGL+G G+ G G PG
Sbjct: 579 SDGPPGHPGKEGPPGTKGNQGPSGPQGPLGYPGPRGVKGVDGIRGLKGHKGEKGEDGFPG 638
Query: 84 PSGSPGPKGQKGDPG 98
G G KG +G+ G
Sbjct: 639 FKGDIGVKGDRGEVG 653
Score = 49.7 bits (117), Expect = 2e-06
Identities = 34/110 (30%), Positives = 40/110 (36%), Gaps = 36/110 (32%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLR--------------------------------G 68
PG G PG+ G G+ G G PG L
Sbjct: 318 PGERGPPGRAGLPGSDGAPGPPGTSLMLPFRFGSGGGDKGPVVAAQEAQAQAILQQARLA 377
Query: 69 LQGPPGKLGPPGNPGPSGSPGPKGQKGDPG----KSPDGDSSLAASERKA 114
L+GPPG +G G PGP G PG G KG+ G + P G L KA
Sbjct: 378 LRGPPGPMGYTGRPGPLGQPGSPGLKGESGDLGPQGPRGPQGLTGPPGKA 427
Score = 49.7 bits (117), Expect = 2e-06
Identities = 29/78 (37%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 23 VTCEDAQKTCPAVIACSSPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNP 82
V ++AQ A++ + + G PG G G G G+PG GL+G G LGP G
Sbjct: 360 VAAQEAQ--AQAILQQARLALRGPPGPMGYTGRPGPLGQPGSP--GLKGESGDLGPQGPR 415
Query: 83 GPSGSPGPKGQKGDPGKS 100
GP G GP G+ G G++
Sbjct: 416 GPQGLTGPPGKAGRRGRA 433
Score = 49.7 bits (117), Expect = 2e-06
Identities = 31/71 (43%), Positives = 34/71 (47%), Gaps = 13/71 (18%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ----GLRGLQGPP---------GKLGPPGNPGPSGS 87
PG G G G DG G GE G G +GL GPP G++GP G PG SG
Sbjct: 442 PGDPGVKGDRGFDGLPGLPGEKGHRGDTGAQGLPGPPGEDGERGDDGEIGPRGLPGESGP 501
Query: 88 PGPKGQKGDPG 98
G G KG PG
Sbjct: 502 RGLLGPKGPPG 512
Score = 49.3 bits (116), Expect = 3e-06
Identities = 28/70 (40%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ----------GLRGLQGPPGKLGPPGNPGPSGSPGP 90
PG G G +G G G G+PG G+ GL G PG+ GP G+ G G PG
Sbjct: 655 PGSRGEDGPEGPKGRTGPTGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGA 714
Query: 91 KGQKGDPGKS 100
G+KG G S
Sbjct: 715 SGEKGARGLS 724
Score = 48.5 bits (114), Expect = 5e-06
Identities = 27/63 (42%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 37 ACSSPGINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKG 95
A G G G G G GE+G PG G G +G PG G PG GP+G G G++G
Sbjct: 825 AAGETGPMGERGHPGPPGPPGEQGLPGTAGKEGTKGDPGPPGAPGKDGPAGLRGFPGERG 884
Query: 96 DPG 98
PG
Sbjct: 885 LPG 887
Score = 44.7 bits (104), Expect = 8e-05
Identities = 34/103 (33%), Positives = 36/103 (34%), Gaps = 39/103 (37%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGK------------------------ 75
PGI G PG G G +G G G G G GPPG
Sbjct: 306 PGIQGNPGPVGDPGERGPPGRAGLPGSDGAPGPPGTSLMLPFRFGSGGGDKGPVVAAQEA 365
Query: 76 -------------LGPPGNPGPSGSPGPKGQKGDPG-KSPDGD 104
GPPG G +G PGP GQ G PG K GD
Sbjct: 366 QAQAILQQARLALRGPPGPMGYTGRPGPLGQPGSPGLKGESGD 408
Score = 41.2 bits (95), Expect = 8e-04
Identities = 32/88 (36%), Positives = 38/88 (43%), Gaps = 8/88 (9%)
Query: 29 QKTCPAVIACSSP-GINGFPGKDGRDGTKGEKGEPG----QGLRGLQGPPGKLGPPGNPG 83
QK + S P G G PG G G KG KG G +G +G+QGPPG PG PG
Sbjct: 1335 QKGEMGIPGASGPIGPGGPPGLPGPAGPKGAKGATGPGGPKGEKGVQGPPGH---PGPPG 1391
Query: 84 PSGSPGPKGQKGDPGKSPDGDSSLAASE 111
P P +S DG + E
Sbjct: 1392 EVIQPLPIQMPKKTRRSVDGSRLMQEDE 1419
Score = 27.7 bits (60), Expect = 9.7
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 5/53 (9%)
Query: 50 DGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPS-----GSPGPKGQKGDP 97
+G + + +P + R Q P +L P N P G G KG+KG+P
Sbjct: 229 EGGQRERPQNQQPHRAQRSPQQQPSRLHRPQNQEPQSQAAHGPRGLKGEKGEP 281
>gi|111118970 collagen, type XI, alpha 2 isoform 1 preproprotein [Homo
sapiens]
Length = 1736
Score = 72.8 bits (177), Expect = 3e-13
Identities = 36/64 (56%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGK 99
SPGI G PG G G +GEKGE GQ G GPPG GP G+ GP G+PGP G GDPG
Sbjct: 1220 SPGIQGEPGVKGPRGERGEKGESGQP--GEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGP 1277
Query: 100 SPDG 103
+G
Sbjct: 1278 PGEG 1281
Score = 65.5 bits (158), Expect = 4e-11
Identities = 34/65 (52%), Positives = 37/65 (56%), Gaps = 7/65 (10%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ-------GLRGLQGPPGKLGPPGNPGPSGSPGPKGQ 93
PG G G+DG G +GE GEPGQ G G GP GK GP G+PG G G KG
Sbjct: 1278 PGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGSPGSEGRQGGKGA 1337
Query: 94 KGDPG 98
KGDPG
Sbjct: 1338 KGDPG 1342
Score = 65.1 bits (157), Expect = 5e-11
Identities = 34/65 (52%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG- 98
PG G PG G DG KGE G+PGQ G +G +G G GPPG GP G PG G G+PG
Sbjct: 1071 PGPAGPPGVAGEDGDKGEVGDPGQKGTKGNKGEHGPPGPPGPIGPVGQPGAAGADGEPGA 1130
Query: 99 KSPDG 103
+ P G
Sbjct: 1131 RGPQG 1135
Score = 63.9 bits (154), Expect = 1e-10
Identities = 33/65 (50%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG- 98
PG G PG G +G G G G G RG G G +GPPG PGP G PG G+KG PG
Sbjct: 993 PGTAGGPGLKGNEGPSGPPGPAGSPGERGAAGSGGPIGPPGRPGPQGPPGAAGEKGVPGE 1052
Query: 99 KSPDG 103
K P G
Sbjct: 1053 KGPIG 1057
Score = 63.9 bits (154), Expect = 1e-10
Identities = 35/62 (56%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGN---PGPSGSPGPKGQKGDPG 98
G G PG G G KGEKG PG L GL GPPG+ G G+ PGP GSPG KG+ G PG
Sbjct: 1393 GPPGLPGLRGDAGAKGEKGHPG--LIGLIGPPGEQGEKGDRGLPGPQGSPGQKGEMGIPG 1450
Query: 99 KS 100
S
Sbjct: 1451 AS 1452
Score = 63.2 bits (152), Expect = 2e-10
Identities = 31/59 (52%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
+PG G PG G G GEKG QG GL G PG GPPG+PG G PG KG +G G
Sbjct: 653 TPGTQGLPGPQGAIGPHGEKGP--QGKPGLPGMPGSDGPPGHPGKEGPPGTKGNQGPSG 709
Score = 62.4 bits (150), Expect = 4e-10
Identities = 36/78 (46%), Positives = 39/78 (50%), Gaps = 16/78 (20%)
Query: 37 ACSSPGINGFPGKDGRDGTKGEKGEPG-QGLRGLQG---------------PPGKLGPPG 80
A PG G PGK G G G G+PG GLRGL G PPG +GPPG
Sbjct: 1337 AKGDPGAIGAPGKTGPVGPAGPAGKPGPDGLRGLPGSVGQQGRPGATGQAGPPGPVGPPG 1396
Query: 81 NPGPSGSPGPKGQKGDPG 98
PG G G KG+KG PG
Sbjct: 1397 LPGLRGDAGAKGEKGHPG 1414
Score = 61.2 bits (147), Expect = 8e-10
Identities = 30/57 (52%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
G G PG +GR G KG KG+PG G PGK GP G GP+G PGP G +G PG
Sbjct: 1321 GPAGSPGSEGRQGGKGAKGDPGA-----IGAPGKTGPVGPAGPAGKPGPDGLRGLPG 1372
Score = 60.1 bits (144), Expect = 2e-09
Identities = 32/62 (51%), Positives = 37/62 (59%), Gaps = 5/62 (8%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGN---PGPSGSPGPKGQKGDP 97
PGI G PG G DG +G KG G +G GPPG+ G PG PGP G+ GP G+KG
Sbjct: 618 PGIPGPPGVRGMDGPQGPKGSLGP--QGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPQ 675
Query: 98 GK 99
GK
Sbjct: 676 GK 677
Score = 60.1 bits (144), Expect = 2e-09
Identities = 30/61 (49%), Positives = 38/61 (62%), Gaps = 4/61 (6%)
Query: 42 GINGFPGKDGRDGTKGEKGEPG----QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDP 97
G +GFPG G G KG++GE G +G G +GP G+ GP G+PGP G G KG+ G P
Sbjct: 739 GEDGFPGFKGDIGVKGDRGEVGVPGSRGEDGPEGPKGRTGPTGDPGPPGLMGEKGKLGVP 798
Query: 98 G 98
G
Sbjct: 799 G 799
Score = 60.1 bits (144), Expect = 2e-09
Identities = 31/60 (51%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGK 99
PG G PG G G GEKG G G G+QGP G GP G PG +G G KG+ GDPG+
Sbjct: 1035 PGPQGPPGAAGEKGVPGEKGPIGPTGRDGVQGPVGLPGPAGPPGVAGEDGDKGEVGDPGQ 1094
Score = 59.3 bits (142), Expect = 3e-09
Identities = 30/64 (46%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Query: 42 GINGFPGKDGRDGTKGEKGEPG-------QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQK 94
G G PG+ G G G KG PG +G+ G QGP G LGP G PGP G G G +
Sbjct: 598 GPRGLPGESGPRGLLGPKGPPGIPGPPGVRGMDGPQGPKGSLGPQGEPGPPGQQGTPGTQ 657
Query: 95 GDPG 98
G PG
Sbjct: 658 GLPG 661
Score = 59.3 bits (142), Expect = 3e-09
Identities = 35/80 (43%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNP------GPSGSPGPKGQK 94
G NGFPG G G G+ G PG G RG G GK GPPG P G +G GP G++
Sbjct: 883 GPNGFPGPKGPPGPPGKDGLPGHPGQRGEVGFQGKTGPPGPPGVVGPQGAAGETGPMGER 942
Query: 95 GDPG-KSPDGDSSLAASERK 113
G PG P G+ L + K
Sbjct: 943 GHPGPPGPPGEQGLPGTAGK 962
Score = 58.9 bits (141), Expect = 4e-09
Identities = 34/83 (40%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 37 ACSSPGINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKG 95
A G G G DG G GE+G PG QG G GP G GPPG G G PG +G+ G
Sbjct: 854 ATGKSGAKGTSGGDGPHGPPGERGLPGPQGPNGFPGPKGPPGPPGKDGLPGHPGQRGEVG 913
Query: 96 DPGKS-PDGDSSLAASERKALQT 117
GK+ P G + + A +T
Sbjct: 914 FQGKTGPPGPPGVVGPQGAAGET 936
Score = 58.5 bits (140), Expect = 5e-09
Identities = 32/74 (43%), Positives = 39/74 (52%), Gaps = 16/74 (21%)
Query: 42 GINGFPGKDGRDGTKGEKGEPG----------QGLRGLQGPPGKLGPPG------NPGPS 85
G G PG G DG +G+ GE G +GL G +GPPG GPPG GP
Sbjct: 577 GAQGLPGPPGEDGERGDDGEIGPRGLPGESGPRGLLGPKGPPGIPGPPGVRGMDGPQGPK 636
Query: 86 GSPGPKGQKGDPGK 99
GS GP+G+ G PG+
Sbjct: 637 GSLGPQGEPGPPGQ 650
Score = 58.2 bits (139), Expect = 7e-09
Identities = 34/79 (43%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 41 PGINGFPGKDGRDGTKG---EKGEPGQ----GLRGLQGPPGKLGPPGNPGPSGSPGPKGQ 93
PG G PGKDG G +G E+G PG GL+G +GP G GP G+PG G+ G G
Sbjct: 969 PGPPGAPGKDGPAGLRGFPGERGLPGTAGGPGLKGNEGPSGPPGPAGSPGERGAAGSGGP 1028
Query: 94 KGDPGK-SPDGDSSLAASE 111
G PG+ P G A +
Sbjct: 1029 IGPPGRPGPQGPPGAAGEK 1047
Score = 57.4 bits (137), Expect = 1e-08
Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGK 99
PG+ G+PG+ G G+ G G PG G +G +G GK GP G GP+G G +G +G GK
Sbjct: 798 PGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGPRGERGPTGPRGQRGPRGATGK 857
Query: 100 S 100
S
Sbjct: 858 S 858
Score = 57.0 bits (136), Expect = 1e-08
Identities = 32/72 (44%), Positives = 36/72 (50%), Gaps = 13/72 (18%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG----------QGLRGLQG---PPGKLGPPGNPGPSGS 87
PG+ G G G G+ G +GEPG QGL G QG P G+ GP G PG G
Sbjct: 624 PGVRGMDGPQGPKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPQGKPGLPGM 683
Query: 88 PGPKGQKGDPGK 99
PG G G PGK
Sbjct: 684 PGSDGPPGHPGK 695
Score = 57.0 bits (136), Expect = 1e-08
Identities = 30/58 (51%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
G+ G G+DG +G KG G G G GL G GKLG PG PG G GPKG G PG
Sbjct: 760 GVPGSRGEDGPEGPKGRTGPTGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPG 817
Score = 57.0 bits (136), Expect = 1e-08
Identities = 29/63 (46%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQ----GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDP 97
G+ G PG G G G+ G G G RG GP G GP G PG G+ GP G+KG+P
Sbjct: 1156 GLQGLPGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEP 1215
Query: 98 GKS 100
G+S
Sbjct: 1216 GES 1218
Score = 56.6 bits (135), Expect = 2e-08
Identities = 32/78 (41%), Positives = 37/78 (47%), Gaps = 17/78 (21%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPP---------------GNPGPS 85
PG G PG G++GTKG+ G PG G GP G G P GN GPS
Sbjct: 951 PGEQGLPGTAGKEGTKGDPGPPGAP--GKDGPAGLRGFPGERGLPGTAGGPGLKGNEGPS 1008
Query: 86 GSPGPKGQKGDPGKSPDG 103
G PGP G G+ G + G
Sbjct: 1009 GPPGPAGSPGERGAAGSG 1026
Score = 56.6 bits (135), Expect = 2e-08
Identities = 31/77 (40%), Positives = 38/77 (49%), Gaps = 12/77 (15%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG----------QGLRGLQGPPGKLGPPGNPGPSGSPGP 90
PG+ G G G G KG++G PG G+ G GP G GPPG PGP+G G
Sbjct: 1413 PGLIGLIGPPGEQGEKGDRGLPGPQGSPGQKGEMGIPGASGPIGPGGPPGLPGPAGPKGA 1472
Query: 91 KGQKGDPGKSPDGDSSL 107
KG G G P G+ +
Sbjct: 1473 KGATGPGG--PKGEKGV 1487
Score = 56.2 bits (134), Expect = 3e-08
Identities = 30/65 (46%), Positives = 36/65 (55%), Gaps = 8/65 (12%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGP------KGQK 94
PG+ G PG DG G G++G PG +G QGP G GP G PGP G G KG K
Sbjct: 678 PGLPGMPGSDGPPGHPGKEGPPGT--KGNQGPSGPQGPLGYPGPRGVKGVDGIRGLKGHK 735
Query: 95 GDPGK 99
G+ G+
Sbjct: 736 GEKGE 740
Score = 56.2 bits (134), Expect = 3e-08
Identities = 32/79 (40%), Positives = 35/79 (44%), Gaps = 16/79 (20%)
Query: 37 ACSSPGINGFPGKDGRDGTKGEKGEPGQ----------------GLRGLQGPPGKLGPPG 80
A G G GK G G +G G GQ G G GPPG+ G PG
Sbjct: 821 ASGEKGARGLSGKSGPRGERGPTGPRGQRGPRGATGKSGAKGTSGGDGPHGPPGERGLPG 880
Query: 81 NPGPSGSPGPKGQKGDPGK 99
GP+G PGPKG G PGK
Sbjct: 881 PQGPNGFPGPKGPPGPPGK 899
Score = 55.8 bits (133), Expect = 3e-08
Identities = 32/71 (45%), Positives = 34/71 (47%), Gaps = 13/71 (18%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGP------------PGNPGPSGS 87
PG G PG G G G KG PG G G GPPG+ GP G PG GS
Sbjct: 1245 PGEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGS 1304
Query: 88 PGPKGQKGDPG 98
PGP G+ G PG
Sbjct: 1305 PGPTGENGPPG 1315
Score = 55.5 bits (132), Expect = 4e-08
Identities = 30/66 (45%), Positives = 37/66 (56%), Gaps = 7/66 (10%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ----GLRGLQGPPGKLGPPGNPGPSGSPG---PKGQ 93
PG+ G G G G GE+G PG G +GL G GK G G+PGP G+PG P G
Sbjct: 924 PGVVGPQGAAGETGPMGERGHPGPPGPPGEQGLPGTAGKEGTKGDPGPPGAPGKDGPAGL 983
Query: 94 KGDPGK 99
+G PG+
Sbjct: 984 RGFPGE 989
Score = 55.1 bits (131), Expect = 6e-08
Identities = 30/62 (48%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGKS 100
G G PG G G GEKG PG+ G G G G GP G PGP+G PG G+ GD G+
Sbjct: 1030 GPPGRPGPQGPPGAAGEKGVPGEKGPIGPTGRDGVQGPVGLPGPAGPPGVAGEDGDKGEV 1089
Query: 101 PD 102
D
Sbjct: 1090 GD 1091
Score = 54.7 bits (130), Expect = 7e-08
Identities = 32/70 (45%), Positives = 34/70 (48%), Gaps = 12/70 (17%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG--- 98
G G PG G G GEKGEPG+ G PG G PG GP G G KG+ G PG
Sbjct: 1195 GPQGPPGGVGNLGPPGEKGEPGES-----GSPGIQGEPGVKGPRGERGEKGESGQPGEPG 1249
Query: 99 ----KSPDGD 104
K P GD
Sbjct: 1250 PPGPKGPTGD 1259
Score = 54.3 bits (129), Expect = 1e-07
Identities = 32/75 (42%), Positives = 37/75 (49%), Gaps = 9/75 (12%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPG----QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKG 95
SPG G G G G +G G PG QG +G +G PG +G PG GP G GP G+ G
Sbjct: 1304 SPGPTGENGPPGPLGKRGPAGSPGSEGRQGGKGAKGDPGAIGAPGKTGPVGPAGPAGKPG 1363
Query: 96 DPGKSPDGDSSLAAS 110
PDG L S
Sbjct: 1364 -----PDGLRGLPGS 1373
Score = 53.9 bits (128), Expect = 1e-07
Identities = 30/70 (42%), Positives = 37/70 (52%), Gaps = 13/70 (18%)
Query: 42 GINGFPGKDGRDGTKGEKGEPG-------QGLRGLQGPPGKLGPPGNPGP------SGSP 88
G+ G PG+ G G +G+ G PG QG G GP G+ G PG PGP G+
Sbjct: 901 GLPGHPGQRGEVGFQGKTGPPGPPGVVGPQGAAGETGPMGERGHPGPPGPPGEQGLPGTA 960
Query: 89 GPKGQKGDPG 98
G +G KGDPG
Sbjct: 961 GKEGTKGDPG 970
Score = 53.5 bits (127), Expect = 2e-07
Identities = 29/67 (43%), Positives = 37/67 (55%), Gaps = 10/67 (14%)
Query: 42 GINGFPGKDGR------DGTKGEKGEPG----QGLRGLQGPPGKLGPPGNPGPSGSPGPK 91
G+ G PGK GR DG +G G+PG +G GL G PG+ G G+ G G PGP
Sbjct: 526 GLTGPPGKAGRRGRAGADGARGMPGDPGVKGDRGFDGLPGLPGEKGHRGDTGAQGLPGPP 585
Query: 92 GQKGDPG 98
G+ G+ G
Sbjct: 586 GEDGERG 592
Score = 53.1 bits (126), Expect = 2e-07
Identities = 28/57 (49%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
G G GK G GT G G+ G G +G PG GP G PGP G PGP G+ G PG
Sbjct: 850 GPRGATGKSGAKGTSG--GDGPHGPPGERGLPGPQGPNGFPGPKGPPGPPGKDGLPG 904
Score = 53.1 bits (126), Expect = 2e-07
Identities = 31/69 (44%), Positives = 36/69 (52%), Gaps = 9/69 (13%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSP------GPKGQKG 95
G +G PG G G G KG+ +G RG GPPG +G G PGPSG GP G G
Sbjct: 1123 GADGEPGARGPQGHFGAKGD--EGTRGFNGPPGPIGLQGLPGPSGEKGETGDVGPMGPPG 1180
Query: 96 DPG-KSPDG 103
PG + P G
Sbjct: 1181 PPGPRGPAG 1189
Score = 52.8 bits (125), Expect = 3e-07
Identities = 29/58 (50%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 42 GINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
G G PG G G KG+ G PG G G QGP G LG PG PG SG G +G G G
Sbjct: 778 GPTGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSG 835
Score = 52.8 bits (125), Expect = 3e-07
Identities = 31/71 (43%), Positives = 33/71 (46%), Gaps = 8/71 (11%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQ-------GLRGLQGPPGKLGPPGNPGPSGSPGPKGQK 94
G G PG G G KGE G PG G GL GP G G G GP G G KG +
Sbjct: 1429 GDRGLPGPQGSPGQKGEMGIPGASGPIGPGGPPGLPGPAGPKGAKGATGPGGPKGEKGVQ 1488
Query: 95 GDPG-KSPDGD 104
G PG P G+
Sbjct: 1489 GPPGHPGPPGE 1499
Score = 52.4 bits (124), Expect = 4e-07
Identities = 29/65 (44%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGP---SGSPGPKGQKGDP 97
G G PG G+ G+ G KGE G G +G +GP G GPPG G +G+ G +G GDP
Sbjct: 493 GYTGRPGPLGQPGSPGLKGESGDLGPQGPRGPQGLTGPPGKAGRRGRAGADGARGMPGDP 552
Query: 98 GKSPD 102
G D
Sbjct: 553 GVKGD 557
Score = 52.0 bits (123), Expect = 5e-07
Identities = 34/82 (41%), Positives = 41/82 (50%), Gaps = 22/82 (26%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG-------QGLRGLQGPPG---KLGPPGN---PGPSGS 87
PG +G G+ G G G G PG G G QGPPG LGPPG PG SGS
Sbjct: 1161 PGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGS 1220
Query: 88 PG---------PKGQKGDPGKS 100
PG P+G++G+ G+S
Sbjct: 1221 PGIQGEPGVKGPRGERGEKGES 1242
Score = 51.6 bits (122), Expect = 6e-07
Identities = 28/59 (47%), Positives = 32/59 (54%), Gaps = 11/59 (18%)
Query: 51 GRDGTKGEKGEPG--------QGLRGLQGPPGKLGPP---GNPGPSGSPGPKGQKGDPG 98
G G KGEKGEP +G G +GP G +GPP GNPGP G PG +G G G
Sbjct: 377 GPRGLKGEKGEPAVLEPGMLVEGPPGPEGPAGLIGPPGIQGNPGPVGDPGERGPPGRAG 435
Score = 51.6 bits (122), Expect = 6e-07
Identities = 31/68 (45%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ----GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGD 96
PG G G DG G KG KGE G+ G +G G G G G PG G GP+G KG
Sbjct: 717 PGPRGVKGVDGIRGLKGHKGEKGEDGFPGFKGDIGVKGDRGEVGVPGSRGEDGPEGPKGR 776
Query: 97 PGKSPDGD 104
G P GD
Sbjct: 777 TG--PTGD 782
Score = 50.1 bits (118), Expect = 2e-06
Identities = 29/75 (38%), Positives = 36/75 (48%), Gaps = 16/75 (21%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPG----------------QGLRGLQGPPGKLGPPGNPG 83
S G G PGK+G GTKG +G G G+RGL+G G+ G G PG
Sbjct: 686 SDGPPGHPGKEGPPGTKGNQGPSGPQGPLGYPGPRGVKGVDGIRGLKGHKGEKGEDGFPG 745
Query: 84 PSGSPGPKGQKGDPG 98
G G KG +G+ G
Sbjct: 746 FKGDIGVKGDRGEVG 760
Score = 49.7 bits (117), Expect = 2e-06
Identities = 34/110 (30%), Positives = 40/110 (36%), Gaps = 36/110 (32%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLR--------------------------------G 68
PG G PG+ G G+ G G PG L
Sbjct: 425 PGERGPPGRAGLPGSDGAPGPPGTSLMLPFRFGSGGGDKGPVVAAQEAQAQAILQQARLA 484
Query: 69 LQGPPGKLGPPGNPGPSGSPGPKGQKGDPG----KSPDGDSSLAASERKA 114
L+GPPG +G G PGP G PG G KG+ G + P G L KA
Sbjct: 485 LRGPPGPMGYTGRPGPLGQPGSPGLKGESGDLGPQGPRGPQGLTGPPGKA 534
Score = 49.7 bits (117), Expect = 2e-06
Identities = 29/78 (37%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 23 VTCEDAQKTCPAVIACSSPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNP 82
V ++AQ A++ + + G PG G G G G+PG GL+G G LGP G
Sbjct: 467 VAAQEAQ--AQAILQQARLALRGPPGPMGYTGRPGPLGQPGSP--GLKGESGDLGPQGPR 522
Query: 83 GPSGSPGPKGQKGDPGKS 100
GP G GP G+ G G++
Sbjct: 523 GPQGLTGPPGKAGRRGRA 540
Score = 49.7 bits (117), Expect = 2e-06
Identities = 31/71 (43%), Positives = 34/71 (47%), Gaps = 13/71 (18%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ----GLRGLQGPP---------GKLGPPGNPGPSGS 87
PG G G G DG G GE G G +GL GPP G++GP G PG SG
Sbjct: 549 PGDPGVKGDRGFDGLPGLPGEKGHRGDTGAQGLPGPPGEDGERGDDGEIGPRGLPGESGP 608
Query: 88 PGPKGQKGDPG 98
G G KG PG
Sbjct: 609 RGLLGPKGPPG 619
Score = 49.3 bits (116), Expect = 3e-06
Identities = 28/70 (40%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ----------GLRGLQGPPGKLGPPGNPGPSGSPGP 90
PG G G +G G G G+PG G+ GL G PG+ GP G+ G G PG
Sbjct: 762 PGSRGEDGPEGPKGRTGPTGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGA 821
Query: 91 KGQKGDPGKS 100
G+KG G S
Sbjct: 822 SGEKGARGLS 831
Score = 48.5 bits (114), Expect = 5e-06
Identities = 27/63 (42%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 37 ACSSPGINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKG 95
A G G G G G GE+G PG G G +G PG G PG GP+G G G++G
Sbjct: 932 AAGETGPMGERGHPGPPGPPGEQGLPGTAGKEGTKGDPGPPGAPGKDGPAGLRGFPGERG 991
Query: 96 DPG 98
PG
Sbjct: 992 LPG 994
Score = 44.7 bits (104), Expect = 8e-05
Identities = 34/103 (33%), Positives = 36/103 (34%), Gaps = 39/103 (37%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGK------------------------ 75
PGI G PG G G +G G G G G GPPG
Sbjct: 413 PGIQGNPGPVGDPGERGPPGRAGLPGSDGAPGPPGTSLMLPFRFGSGGGDKGPVVAAQEA 472
Query: 76 -------------LGPPGNPGPSGSPGPKGQKGDPG-KSPDGD 104
GPPG G +G PGP GQ G PG K GD
Sbjct: 473 QAQAILQQARLALRGPPGPMGYTGRPGPLGQPGSPGLKGESGD 515
Score = 41.2 bits (95), Expect = 8e-04
Identities = 32/88 (36%), Positives = 38/88 (43%), Gaps = 8/88 (9%)
Query: 29 QKTCPAVIACSSP-GINGFPGKDGRDGTKGEKGEPG----QGLRGLQGPPGKLGPPGNPG 83
QK + S P G G PG G G KG KG G +G +G+QGPPG PG PG
Sbjct: 1442 QKGEMGIPGASGPIGPGGPPGLPGPAGPKGAKGATGPGGPKGEKGVQGPPGH---PGPPG 1498
Query: 84 PSGSPGPKGQKGDPGKSPDGDSSLAASE 111
P P +S DG + E
Sbjct: 1499 EVIQPLPIQMPKKTRRSVDGSRLMQEDE 1526
>gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]
Length = 1466
Score = 71.2 bits (173), Expect = 8e-13
Identities = 34/62 (54%), Positives = 42/62 (67%), Gaps = 3/62 (4%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGKSP 101
G G PG++G G KGE+G PG+ +G GPPG GPPG GP+G PGP+G KG+ G SP
Sbjct: 810 GFPGAPGQNGEPGGKGERGAPGE--KGEGGPPGVAGPPGGSGPAGPPGPQGVKGERG-SP 866
Query: 102 DG 103
G
Sbjct: 867 GG 868
Score = 70.1 bits (170), Expect = 2e-12
Identities = 33/61 (54%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGK 99
PG+ G PG G G+ G+ G PG QG G GPPG GP G PG G PGPKG G PGK
Sbjct: 533 PGMRGMPGSPGGPGSDGKPGPPGSQGESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGK 592
Query: 100 S 100
+
Sbjct: 593 N 593
Score = 68.2 bits (165), Expect = 6e-12
Identities = 34/69 (49%), Positives = 41/69 (59%), Gaps = 7/69 (10%)
Query: 37 ACSSPGINGFPGKDG---RDGTKGEKGEPG----QGLRGLQGPPGKLGPPGNPGPSGSPG 89
A +PG+ G PG+ G G KG+KGEPG G+ G GP G GP G PGP+G PG
Sbjct: 718 AAGTPGLQGMPGERGGLGSPGPKGDKGEPGGPGADGVPGKDGPRGPTGPIGPPGPAGQPG 777
Query: 90 PKGQKGDPG 98
KG+ G PG
Sbjct: 778 DKGEGGAPG 786
Score = 67.4 bits (163), Expect = 1e-11
Identities = 36/68 (52%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGK 99
PG+ GFPG G DG G+ GE G G G QGPPGK G G GP G GP G KGD G
Sbjct: 575 PGVMGFPGPKGNDGAPGKNGERGGPGGPGPQGPPGKNGETGPQGPPGPTGPGGDKGDTG- 633
Query: 100 SPDGDSSL 107
P G L
Sbjct: 634 -PPGPQGL 640
Score = 67.0 bits (162), Expect = 1e-11
Identities = 39/82 (47%), Positives = 42/82 (51%), Gaps = 17/82 (20%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG-------QGLRGLQGPPGKLGPPGNPGPSGS------ 87
PG +G G G G KGE+G PG G RGL GPPG G PG PGPSGS
Sbjct: 845 PGGSGPAGPPGPQGVKGERGSPGGPGAAGFPGARGLPGPPGSNGNPGPPGPSGSPGKDGP 904
Query: 88 PGPKGQKGDPG----KSPDGDS 105
PGP G G PG P GD+
Sbjct: 905 PGPAGNTGAPGSPGVSGPKGDA 926
Score = 67.0 bits (162), Expect = 1e-11
Identities = 34/70 (48%), Positives = 42/70 (60%), Gaps = 7/70 (10%)
Query: 37 ACSSPGING------FPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGPSGSPG 89
A SPG++G PG+ G G +G G PG G+ G+ G G GPPG PGP GSPG
Sbjct: 913 APGSPGVSGPKGDAGQPGEKGSPGAQGPPGAPGPLGIAGITGARGLAGPPGMPGPRGSPG 972
Query: 90 PKGQKGDPGK 99
P+G KG+ GK
Sbjct: 973 PQGVKGESGK 982
Score = 63.9 bits (154), Expect = 1e-10
Identities = 31/58 (53%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
PG+ G G DGR+G KGE G PG L+G G PG+ G PG GP G+PG +G+ G PG
Sbjct: 260 PGMKGHRGFDGRNGEKGETGAPG--LKGENGLPGENGAPGPMGPRGAPGERGRPGLPG 315
Score = 63.5 bits (153), Expect = 2e-10
Identities = 36/88 (40%), Positives = 43/88 (48%), Gaps = 25/88 (28%)
Query: 41 PGINGFPGKDG---------------RDGTKGEKGEPG----------QGLRGLQGPPGK 75
PG +G PGKDG + G KGE G PG G RG GPPG
Sbjct: 749 PGADGVPGKDGPRGPTGPIGPPGPAGQPGDKGEGGAPGLPGIAGPRGSPGERGETGPPGP 808
Query: 76 LGPPGNPGPSGSPGPKGQKGDPGKSPDG 103
G PG PG +G PG KG++G PG+ +G
Sbjct: 809 AGFPGAPGQNGEPGGKGERGAPGEKGEG 836
Score = 63.5 bits (153), Expect = 2e-10
Identities = 32/67 (47%), Positives = 38/67 (56%), Gaps = 7/67 (10%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ-------GLRGLQGPPGKLGPPGNPGPSGSPGPKGQ 93
PG+ G G+ GRDG G G PG+ G RG G PG G PG+PGP G GP G+
Sbjct: 1001 PGLAGTAGEPGRDGNPGSDGLPGRDGSPGGKGDRGENGSPGAPGAPGHPGPPGPVGPAGK 1060
Query: 94 KGDPGKS 100
GD G+S
Sbjct: 1061 SGDRGES 1067
Score = 62.8 bits (151), Expect = 3e-10
Identities = 34/68 (50%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGKSP 101
G G PG G G KG+ G PG +GLQG PG GPPG G G PGPKG G PG +P
Sbjct: 615 GPQGPPGPTGPGGDKGDTGPPGP--QGLQGLPGTGGPPGENGKPGEPGPKGDAGAPG-AP 671
Query: 102 DGDSSLAA 109
G A
Sbjct: 672 GGKGDAGA 679
Score = 62.4 bits (150), Expect = 4e-10
Identities = 34/83 (40%), Positives = 45/83 (54%), Gaps = 22/83 (26%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPGQ----GLRGLQGPPGKLGPPGN-------------- 81
+PG +G PG+DG G KG++GE G G G GPPG +GP G
Sbjct: 1015 NPGSDGLPGRDGSPGGKGDRGENGSPGAPGAPGHPGPPGPVGPAGKSGDRGESGPAGPAG 1074
Query: 82 -PGPSGS---PGPKGQKGDPGKS 100
PGP+GS PGP+G +GD G++
Sbjct: 1075 APGPAGSRGAPGPQGPRGDKGET 1097
Score = 61.2 bits (147), Expect = 8e-10
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 8/86 (9%)
Query: 37 ACSSPGINGFPGKDGRDGTKGEKGEPGQ-------GLRGLQGPPGKLGPPGNPGPSGSPG 89
A +PG+ G G+ G++G KGE G G+ G+ G +G GK G PG PG +G PG
Sbjct: 421 ANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGAKGEDGKDGSPGEPGANGLPG 480
Query: 90 PKGQKGDPG-KSPDGDSSLAASERKA 114
G++G PG + P G + + + A
Sbjct: 481 AAGERGAPGFRGPAGPNGIPGEKGPA 506
Score = 60.8 bits (146), Expect = 1e-09
Identities = 33/71 (46%), Positives = 36/71 (50%), Gaps = 13/71 (18%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGP------------PGNPGPSGS 87
PG +G PG G G +G GEPGQ G G GPPG +GP PG PG G
Sbjct: 185 PGTSGHPGSPGSPGYQGPPGEPGQAGPSGPPGPPGAIGPSGPAGKDGESGRPGRPGERGL 244
Query: 88 PGPKGQKGDPG 98
PGP G KG G
Sbjct: 245 PGPPGIKGPAG 255
Score = 60.8 bits (146), Expect = 1e-09
Identities = 33/79 (41%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG-------QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQ 93
PG NG PG G G GE+G PG +G G +G G+ GPPG PG +G PG G
Sbjct: 290 PGENGAPGPMGPRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGA 349
Query: 94 KGDPGKSPDGDSSLAASER 112
KG+ G + S+ A +R
Sbjct: 350 KGEVGPAGSPGSNGAPGQR 368
Score = 60.5 bits (145), Expect = 1e-09
Identities = 31/59 (52%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
PGING PG G G G G PG G RG GP G G PG G +G PG G KG+PG
Sbjct: 386 PGINGSPGGKGEMGPAGIPGAPGLMGARGPPGPAGANGAPGLRGGAGEPGKNGAKGEPG 444
Score = 60.5 bits (145), Expect = 1e-09
Identities = 30/59 (50%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
+PG+ G G G +G KG G PG G G PG G PG G GSPGPKG KG+PG
Sbjct: 691 APGLRGGAGPPGPEGGKGAAGPPGPP--GAAGTPGLQGMPGERGGLGSPGPKGDKGEPG 747
Score = 60.5 bits (145), Expect = 1e-09
Identities = 30/62 (48%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG----QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGD 96
PG G PG G G +G G PG +G G GPPGK G G+PGP G PGP+G +G+
Sbjct: 1112 PGNPGAPGSPGPAGQQGAIGSPGPAGPRGPVGPSGPPGKDGTSGHPGPIGPPGPRGNRGE 1171
Query: 97 PG 98
G
Sbjct: 1172 RG 1173
Score = 60.1 bits (144), Expect = 2e-09
Identities = 30/61 (49%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGK 99
PG G PG G GT G G PG G +G G PG+ GP G PGP G+ GP G G G+
Sbjct: 173 PGPAGPPGPPGPPGTSGHPGSPGSPGYQGPPGEPGQAGPSGPPGPPGAIGPSGPAGKDGE 232
Query: 100 S 100
S
Sbjct: 233 S 233
Score = 58.5 bits (140), Expect = 5e-09
Identities = 32/65 (49%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ----GLRGLQGPPGKLG---PPGNPGPSGSPGPKGQ 93
PG GFPG G G G G PG G RG GP G G PPG PG +GSPG KG+
Sbjct: 338 PGTAGFPGSPGAKGEVGPAGSPGSNGAPGQRGEPGPQGHAGAQGPPGPPGINGSPGGKGE 397
Query: 94 KGDPG 98
G G
Sbjct: 398 MGPAG 402
Score = 58.5 bits (140), Expect = 5e-09
Identities = 31/70 (44%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG- 98
+PG+ G G G G +GE G PG G G PG+ G PG G G+PG KG+ G PG
Sbjct: 784 APGLPGIAGPRGSPGERGETGPPGPA--GFPGAPGQNGEPGGKGERGAPGEKGEGGPPGV 841
Query: 99 KSPDGDSSLA 108
P G S A
Sbjct: 842 AGPPGGSGPA 851
Score = 57.8 bits (138), Expect = 9e-09
Identities = 33/74 (44%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG----QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGD 96
PG NG PG+ G G G G PG G G +GPPG G PG G +G PGP+G KG
Sbjct: 650 PGENGKPGEPGPKGDAGAPGAPGGKGDAGAPGERGPPGLAGAPGLRGGAGPPGPEGGKGA 709
Query: 97 PGKSPDGDSSLAAS 110
G P G A +
Sbjct: 710 AG--PPGPPGAAGT 721
Score = 57.8 bits (138), Expect = 9e-09
Identities = 30/65 (46%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 42 GINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGKS 100
G+ G GK G +G GE+G PG QGL GL G G+ G GNPG G PG G G G
Sbjct: 975 GVKGESGKPGANGLSGERGPPGPQGLPGLAGTAGEPGRDGNPGSDGLPGRDGSPGGKGDR 1034
Query: 101 PDGDS 105
+ S
Sbjct: 1035 GENGS 1039
Score = 57.8 bits (138), Expect = 9e-09
Identities = 30/59 (50%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
+PG G G G G +G+KGE G+ RG G G G PGNPG GSPGP GQ+G G
Sbjct: 1075 APGPAGSRGAPGPQGPRGDKGETGE--RGAAGIKGHRGFPGNPGAPGSPGPAGQQGAIG 1131
Score = 57.4 bits (137), Expect = 1e-08
Identities = 30/72 (41%), Positives = 38/72 (52%), Gaps = 13/72 (18%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG----------QGLRGLQGP---PGKLGPPGNPGPSGS 87
PG+ G G+DG+DG+ GE G G G RG GP PG+ GP G G G
Sbjct: 455 PGVPGAKGEDGKDGSPGEPGANGLPGAAGERGAPGFRGPAGPNGIPGEKGPAGERGAPGP 514
Query: 88 PGPKGQKGDPGK 99
GP+G G+PG+
Sbjct: 515 AGPRGAAGEPGR 526
Score = 56.2 bits (134), Expect = 3e-08
Identities = 28/53 (52%), Positives = 32/53 (60%), Gaps = 4/53 (7%)
Query: 42 GINGFPGKDGRDGTKGEKGEPG----QGLRGLQGPPGKLGPPGNPGPSGSPGP 90
G +G PGKDG G G G PG +G RG +G PG G PG PGP G+PGP
Sbjct: 1143 GPSGPPGKDGTSGHPGPIGPPGPRGNRGERGSEGSPGHPGQPGPPGPPGAPGP 1195
Score = 55.8 bits (133), Expect = 3e-08
Identities = 30/67 (44%), Positives = 37/67 (55%), Gaps = 14/67 (20%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPG------PSGSPGPK--- 91
PG+ G G G DG +G G+PG GPPG G PG+PG P+GSPG
Sbjct: 311 PGLPGAAGARGNDGARGSDGQPGP-----PGPPGTAGFPGSPGAKGEVGPAGSPGSNGAP 365
Query: 92 GQKGDPG 98
GQ+G+PG
Sbjct: 366 GQRGEPG 372
Score = 55.8 bits (133), Expect = 3e-08
Identities = 32/74 (43%), Positives = 35/74 (47%), Gaps = 11/74 (14%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ-------GLRGLQGPPGKLGPPGNP---GPSGSPGP 90
PG GFPG G G G G PG G G GP G G PG+P GP G G
Sbjct: 869 PGAAGFPGARGLPGPPGSNGNPGPPGPSGSPGKDGPPGPAGNTGAPGSPGVSGPKGDAGQ 928
Query: 91 KGQKGDPG-KSPDG 103
G+KG PG + P G
Sbjct: 929 PGEKGSPGAQGPPG 942
Score = 55.8 bits (133), Expect = 3e-08
Identities = 28/63 (44%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 37 ACSSPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGD 96
A PG G PG G +G G G G G GPPG G G PG G GPKG G
Sbjct: 871 AAGFPGARGLPGPPGSNGNPGPPGPSGS--PGKDGPPGPAGNTGAPGSPGVSGPKGDAGQ 928
Query: 97 PGK 99
PG+
Sbjct: 929 PGE 931
Score = 55.8 bits (133), Expect = 3e-08
Identities = 30/62 (48%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGN---PGPSGSPGPKGQKGD 96
PG NG PG G G+ G+ G PG G G G PG GP G+ PG GSPG +G G
Sbjct: 884 PGSNGNPGPPGPSGSPGKDGPPGPAGNTGAPGSPGVSGPKGDAGQPGEKGSPGAQGPPGA 943
Query: 97 PG 98
PG
Sbjct: 944 PG 945
Score = 55.8 bits (133), Expect = 3e-08
Identities = 35/77 (45%), Positives = 38/77 (49%), Gaps = 15/77 (19%)
Query: 42 GINGFPGKDGRDGTKGEKGEPG----QGLRGLQGPPGKLGPPG---------NPGPSGSP 88
G G PG G G KGE GE G +G RG G PG G PG +PGP+G
Sbjct: 1080 GSRGAPGPQGPRGDKGETGERGAAGIKGHRGFPGNPGAPGSPGPAGQQGAIGSPGPAGPR 1139
Query: 89 GPKGQKGDPGKSPDGDS 105
GP G G PGK DG S
Sbjct: 1140 GPVGPSGPPGK--DGTS 1154
Score = 55.5 bits (132), Expect = 4e-08
Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
PG NG PG G G G +G G G+ G +GP G+ G PG GP G+ G G+ G PG
Sbjct: 473 PGANGLPGAAGERGAPGFRGPAGPNGIPGEKGPAGERGAPGPAGPRGAAGEPGRDGVPG 531
Score = 55.5 bits (132), Expect = 4e-08
Identities = 32/70 (45%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Query: 37 ACSSPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGD 96
A G GF G G +G GEKG G+ RG GP G G G PG G PG G +G
Sbjct: 481 AAGERGAPGFRGPAGPNGIPGEKGPAGE--RGAPGPAGPRGAAGEPGRDGVPGGPGMRGM 538
Query: 97 PGKSPDGDSS 106
PG SP G S
Sbjct: 539 PG-SPGGPGS 547
Score = 55.5 bits (132), Expect = 4e-08
Identities = 28/59 (47%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGKS 100
G G G+ GRDG G G G+RG+ G PG G G PGP GS G G+ G PG S
Sbjct: 516 GPRGAAGEPGRDGVPG-----GPGMRGMPGSPGGPGSDGKPGPPGSQGESGRPGPPGPS 569
Score = 55.1 bits (131), Expect = 6e-08
Identities = 28/60 (46%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGKS 100
G G PG G +G+ G KGE G G+ G G G GPPG G +G+PG +G G+PGK+
Sbjct: 378 GAQGPPGPPGINGSPGGKGEMGPAGIPGAPGLMGARGPPGPAGANGAPGLRGGAGEPGKN 437
Score = 54.7 bits (130), Expect = 7e-08
Identities = 32/74 (43%), Positives = 36/74 (48%), Gaps = 13/74 (17%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPGQ----GLRGLQGPPGKLGP---------PGNPGPSG 86
+PG NG PG G G GEKGE G G G GP G GP PG PG +G
Sbjct: 814 APGQNGEPGGKGERGAPGEKGEGGPPGVAGPPGGSGPAGPPGPQGVKGERGSPGGPGAAG 873
Query: 87 SPGPKGQKGDPGKS 100
PG +G G PG +
Sbjct: 874 FPGARGLPGPPGSN 887
Score = 54.3 bits (129), Expect = 1e-07
Identities = 27/58 (46%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGK 99
GI GFPG G G G GE G+ G PG G G PG +G+PGP G +G PG+
Sbjct: 255 GIPGFPGMKGHRGFDGRNGEKGE-----TGAPGLKGENGLPGENGAPGPMGPRGAPGE 307
Score = 54.3 bits (129), Expect = 1e-07
Identities = 32/71 (45%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 42 GINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGKS 100
GI G PG G DG G GEPG GL G G G G G GP+G PG KG G+ G
Sbjct: 453 GIPGVPGAKGEDGKDGSPGEPGANGLPGAAGERGAPGFRGPAGPNGIPGEKGPAGERGAP 512
Query: 101 PDGDSSLAASE 111
AA E
Sbjct: 513 GPAGPRGAAGE 523
Score = 53.5 bits (127), Expect = 2e-07
Identities = 29/60 (48%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGKS 100
PG G G G+DG G G PG+ RGL GPPG GP G P G PG KG +G G++
Sbjct: 218 PGAIGPSGPAGKDGESGRPGRPGE--RGLPGPPGIKGPAGIP---GFPGMKGHRGFDGRN 272
Score = 53.5 bits (127), Expect = 2e-07
Identities = 30/60 (50%), Positives = 33/60 (55%), Gaps = 10/60 (16%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
SPG NG P G++GEPG QG G QGPPG G G+PG G GP G G PG
Sbjct: 358 SPGSNGAP---------GQRGEPGPQGHAGAQGPPGPPGINGSPGGKGEMGPAGIPGAPG 408
Score = 53.5 bits (127), Expect = 2e-07
Identities = 30/66 (45%), Positives = 34/66 (51%), Gaps = 7/66 (10%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPS------GSPGPKGQ 93
PG G PG G G +G G PG +G +G G PG G PG GP G PGP GQ
Sbjct: 716 PGAAGTPGLQGMPGERGGLGSPGPKGDKGEPGGPGADGVPGKDGPRGPTGPIGPPGPAGQ 775
Query: 94 KGDPGK 99
GD G+
Sbjct: 776 PGDKGE 781
Score = 51.6 bits (122), Expect = 6e-07
Identities = 31/89 (34%), Positives = 35/89 (39%), Gaps = 30/89 (33%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG------------------------------QGLRGLQ 70
PG NG PG G+ G+ G G PG G G
Sbjct: 117 PGRNGDPGIPGQPGSPGSPGPPGICESCPTGPQNYSPQYDSYDVKSGVAVGGLAGYPGPA 176
Query: 71 GPPGKLGPPGNPGPSGSPGPKGQKGDPGK 99
GPPG GPPG G GSPG G +G PG+
Sbjct: 177 GPPGPPGPPGTSGHPGSPGSPGYQGPPGE 205
Score = 51.6 bits (122), Expect = 6e-07
Identities = 25/58 (43%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
PG G G G G GE G+PG+ GP G G PG PG G G G++G PG
Sbjct: 635 PGPQGLQGLPGTGGPPGENGKPGE-----PGPKGDAGAPGAPGGKGDAGAPGERGPPG 687
Score = 50.8 bits (120), Expect = 1e-06
Identities = 28/62 (45%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 42 GINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGK---LGPPGNPGPSGSPGPKGQKGDP 97
GI G G G G G +G PG QG++G G PG G G PGP G PG G G+P
Sbjct: 951 GITGARGLAGPPGMPGPRGSPGPQGVKGESGKPGANGLSGERGPPGPQGLPGLAGTAGEP 1010
Query: 98 GK 99
G+
Sbjct: 1011 GR 1012
Score = 48.5 bits (114), Expect = 5e-06
Identities = 29/67 (43%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 33 PAVIACSSPGINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPK 91
P I S P G G+ GR G GE+G PG G++G G PG G G+ G G G K
Sbjct: 218 PGAIGPSGPA--GKDGESGRPGRPGERGLPGPPGIKGPAGIPGFPGMKGHRGFDGRNGEK 275
Query: 92 GQKGDPG 98
G+ G PG
Sbjct: 276 GETGAPG 282
Score = 47.8 bits (112), Expect = 9e-06
Identities = 31/75 (41%), Positives = 37/75 (49%), Gaps = 11/75 (14%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG----QGLRGLQGPPGKLGPPGNPGPSGS------PGP 90
PG NG G+ G G +GE G PG +G G G PG+ G G PG +G GP
Sbjct: 434 PGKNGAKGEPGPRGERGEAGIPGVPGAKGEDGKDGSPGEPGANGLPGAAGERGAPGFRGP 493
Query: 91 KGQKGDPG-KSPDGD 104
G G PG K P G+
Sbjct: 494 AGPNGIPGEKGPAGE 508
Score = 44.7 bits (104), Expect = 8e-05
Identities = 29/91 (31%), Positives = 38/91 (41%), Gaps = 14/91 (15%)
Query: 21 ETVTCEDAQKTCP--------AVIACSSPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGP 72
+ + C+D + CP C P +G+ G +G KG+PG G
Sbjct: 63 DDIICDDQELDCPNPEIPFGECCAVCPQPPTAPTRPPNGQ-GPQGPKGDPGP-----PGI 116
Query: 73 PGKLGPPGNPGPSGSPGPKGQKGDPGKSPDG 103
PG+ G PG PG GSPG G G P G
Sbjct: 117 PGRNGDPGIPGQPGSPGSPGPPGICESCPTG 147
>gi|18780273 collagen, type XXI, alpha 1 precursor [Homo sapiens]
Length = 957
Score = 70.9 bits (172), Expect = 1e-12
Identities = 34/59 (57%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
PGI GFPG G G KGE G PGQ G +G G PG +G G+PG G+PG KG KG+PG
Sbjct: 604 PGIPGFPGNRGLMGQKGEIGPPGQQGKKGAPGMPGLMGSNGSPGQPGTPGSKGSKGEPG 662
Score = 67.8 bits (164), Expect = 8e-12
Identities = 33/61 (54%), Positives = 38/61 (62%), Gaps = 4/61 (6%)
Query: 42 GINGFPGKDGRDGTKGEKGEPG----QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDP 97
G NG PG+ G G+KG KGEPG G GL+G PG G PG PG G PG +G+KGD
Sbjct: 641 GSNGSPGQPGTPGSKGSKGEPGIQGMPGASGLKGEPGATGSPGEPGYMGLPGIQGKKGDK 700
Query: 98 G 98
G
Sbjct: 701 G 701
Score = 62.4 bits (150), Expect = 4e-10
Identities = 34/79 (43%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGK--------LGPPGNPGPSGSPGPKG 92
G G PG GRDG G G PG+ G+RGL+G PG+ G PG GP G PGP+G
Sbjct: 840 GPRGLPGLPGRDGVPGLVGVPGRPGVRGLKGLPGRNGEKGSQGFGYPGEQGPPGPPGPEG 899
Query: 93 QKGDPGKSPDGDSSLAASE 111
G + P GD L +
Sbjct: 900 PPGISKEGPPGDPGLPGKD 918
Score = 61.6 bits (148), Expect = 6e-10
Identities = 32/71 (45%), Positives = 39/71 (54%), Gaps = 13/71 (18%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSG------------S 87
PG++G PG G G KG+KG PG G +G +G G G PG PGP+G S
Sbjct: 523 PGLHGMPGSKGEMGAKGDKGSPGFYGKKGAKGEKGNAGFPGLPGPAGEPGRHGKDGLMGS 582
Query: 88 PGPKGQKGDPG 98
PG KG+ G PG
Sbjct: 583 PGFKGEAGSPG 593
Score = 60.1 bits (144), Expect = 2e-09
Identities = 30/65 (46%), Positives = 34/65 (52%), Gaps = 10/65 (15%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG----------QGLRGLQGPPGKLGPPGNPGPSGSPGP 90
PG G G G G +GEKGEPG G+ GL GP G G PG+PGP G PG
Sbjct: 721 PGQQGIQGHHGAKGERGEKGEPGVRGAIGSKGESGVDGLMGPAGPKGQPGDPGPQGPPGL 780
Query: 91 KGQKG 95
G+ G
Sbjct: 781 DGKPG 785
Score = 59.7 bits (143), Expect = 2e-09
Identities = 34/70 (48%), Positives = 37/70 (52%), Gaps = 11/70 (15%)
Query: 41 PGINGFPGKDGRDGTKG------EKGEPGQGLRGLQGPPGKLGPPGNP-----GPSGSPG 89
PG+ G PG+ G G KG EKG G G G QGPPG GP G P GP G PG
Sbjct: 854 PGLVGVPGRPGVRGLKGLPGRNGEKGSQGFGYPGEQGPPGPPGPEGPPGISKEGPPGDPG 913
Query: 90 PKGQKGDPGK 99
G+ GD GK
Sbjct: 914 LPGKDGDHGK 923
Score = 58.9 bits (141), Expect = 4e-09
Identities = 33/77 (42%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 33 PAVIACSSPGINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGPSGSPGPK 91
P + PG+ G G G G G G+PGQ G G QG G G PG+PG G+ G
Sbjct: 443 PCICPPGKPGLQGPKGDPGLPGNPGYPGQPGQDGKPGYQGIAGTPGVPGSPGIQGARGLP 502
Query: 92 GQKGDPGKSPD-GDSSL 107
G KG+PG+ D GD L
Sbjct: 503 GYKGEPGRDGDKGDRGL 519
Score = 56.2 bits (134), Expect = 3e-08
Identities = 31/64 (48%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPGQ----GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKG 95
+PG+ G PG G G G KGEPG+ G RGL G PG G PG+ G G+ G KG G
Sbjct: 486 TPGVPGSPGIQGARGLPGYKGEPGRDGDKGDRGLPGFPGLHGMPGSKGEMGAKGDKGSPG 545
Query: 96 DPGK 99
GK
Sbjct: 546 FYGK 549
Score = 55.8 bits (133), Expect = 3e-08
Identities = 28/58 (48%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGK 99
G+ G+ G+ GRDG KG++G PG GL G PG G G G GSPG G+KG G+
Sbjct: 500 GLPGYKGEPGRDGDKGDRGLPG--FPGLHGMPGSKGEMGAKGDKGSPGFYGKKGAKGE 555
Score = 54.7 bits (130), Expect = 7e-08
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 37 ACSSPGINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKG 95
A SPG G+ G G G KG+KG G+ G++G +G G+ G PG G G G KG++G
Sbjct: 678 ATGSPGEPGYMGLPGIQGKKGDKGNQGEKGIQGQKGENGRQGIPGQQGIQGHHGAKGERG 737
Query: 96 DPGK 99
+ G+
Sbjct: 738 EKGE 741
Score = 54.3 bits (129), Expect = 1e-07
Identities = 28/59 (47%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
PGI G PG G G G G PG+ G GL G GK G GN G G G KG+ G G
Sbjct: 661 PGIQGMPGASGLKGEPGATGSPGEPGYMGLPGIQGKKGDKGNQGEKGIQGQKGENGRQG 719
Score = 53.9 bits (128), Expect = 1e-07
Identities = 29/68 (42%), Positives = 39/68 (57%), Gaps = 11/68 (16%)
Query: 42 GINGFPGKDGRDGTKG-----EKGEPG----QGLRGL--QGPPGKLGPPGNPGPSGSPGP 90
G+ G PG++G G++G E+G PG +G G+ +GPPG G PG G G PG
Sbjct: 867 GLKGLPGRNGEKGSQGFGYPGEQGPPGPPGPEGPPGISKEGPPGDPGLPGKDGDHGKPGI 926
Query: 91 KGQKGDPG 98
+GQ G PG
Sbjct: 927 QGQPGPPG 934
Score = 52.4 bits (124), Expect = 4e-07
Identities = 30/63 (47%), Positives = 36/63 (57%), Gaps = 13/63 (20%)
Query: 40 SPGING---FPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKG 95
SPG G PG G+DGT+GE G PG G RGL G G++GPPG +G+KG
Sbjct: 582 SPGFKGEAGSPGAPGQDGTRGEPGIPGFPGNRGLMGQKGEIGPPGQ---------QGKKG 632
Query: 96 DPG 98
PG
Sbjct: 633 APG 635
Score = 50.4 bits (119), Expect = 1e-06
Identities = 28/70 (40%), Positives = 33/70 (47%), Gaps = 10/70 (14%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG----------QGLRGLQGPPGKLGPPGNPGPSGSPGP 90
PG G PG G+ G KG +GE G QG+ G QG G G G G G PG
Sbjct: 685 PGYMGLPGIQGKKGDKGNQGEKGIQGQKGENGRQGIPGQQGIQGHHGAKGERGEKGEPGV 744
Query: 91 KGQKGDPGKS 100
+G G G+S
Sbjct: 745 RGAIGSKGES 754
Score = 46.2 bits (108), Expect = 3e-05
Identities = 28/66 (42%), Positives = 34/66 (51%), Gaps = 11/66 (16%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGK 99
SPGI G PG G +G RGL G PG+ G PG G G PG +G KG PG+
Sbjct: 826 SPGIPGPPGPIGPEGP-----------RGLPGLPGRDGVPGLVGVPGRPGVRGLKGLPGR 874
Query: 100 SPDGDS 105
+ + S
Sbjct: 875 NGEKGS 880
Score = 45.1 bits (105), Expect = 6e-05
Identities = 29/69 (42%), Positives = 32/69 (46%), Gaps = 7/69 (10%)
Query: 37 ACSSPGING--FPGKDGRDGTKGE----KGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPG 89
AC PG NG G T G+PG QG +G G PG G PG PG G PG
Sbjct: 420 ACEIPGFNGECLNGPSDVGSTPAPCICPPGKPGLQGPKGDPGLPGNPGYPGQPGQDGKPG 479
Query: 90 PKGQKGDPG 98
+G G PG
Sbjct: 480 YQGIAGTPG 488
Score = 43.1 bits (100), Expect = 2e-04
Identities = 32/100 (32%), Positives = 38/100 (38%), Gaps = 38/100 (38%)
Query: 37 ACSSPGINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGK-------------------- 75
A S G +G G G G KG+ G+PG QG GL G PG+
Sbjct: 747 AIGSKGESGVDGLMGPAGPKGQPGDPGPQGPPGLDGKPGREFSEQFIRQVCTDVIRAQLP 806
Query: 76 -----------------LGPPGNPGPSGSPGPKGQKGDPG 98
G PG PGP G GP+G +G PG
Sbjct: 807 VLLQSGRIRNCDHCLSQHGSPGIPGPPGPIGPEGPRGLPG 846
Score = 40.4 bits (93), Expect = 0.001
Identities = 25/76 (32%), Positives = 29/76 (38%), Gaps = 26/76 (34%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPP--------------------- 79
PG+ G G GR+G KG +G G +G GPPG GPP
Sbjct: 863 PGVRGLKGLPGRNGEKGSQGFGYPGEQGPPGPPGPEGPPGISKEGPPGDPGLPGKDGDHG 922
Query: 80 -----GNPGPSGSPGP 90
G PGP G P
Sbjct: 923 KPGIQGQPGPPGICDP 938
Score = 37.4 bits (85), Expect = 0.012
Identities = 19/40 (47%), Positives = 21/40 (52%), Gaps = 6/40 (15%)
Query: 65 GLRGLQGPPGKLGP------PGNPGPSGSPGPKGQKGDPG 98
G G+ GPPG +GP PG PG G PG G G PG
Sbjct: 825 GSPGIPGPPGPIGPEGPRGLPGLPGRDGVPGLVGVPGRPG 864
Score = 33.5 bits (75), Expect = 0.18
Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 8/46 (17%)
Query: 33 PAVIACSSPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGP 78
P + PG G PGKDG G G +G+P GPPG P
Sbjct: 901 PGISKEGPPGDPGLPGKDGDHGKPGIQGQP--------GPPGICDP 938
>gi|89142737 alpha 3 type IV collagen isoform 5 precursor [Homo
sapiens]
Length = 1424
Score = 70.5 bits (171), Expect = 1e-12
Identities = 36/75 (48%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 41 PGINGFPGKDGRDG---TKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGD 96
PG+ G PG+ G DG T G KG PG +G L G G GPPG+PG GSPGP G G
Sbjct: 556 PGLRGQPGRKGLDGIPGTPGVKGLPGPKGELALSGEKGDQGPPGDPGSPGSPGPAGPAGP 615
Query: 97 PGKSPDGDSSLAASE 111
PG P G+ L ++
Sbjct: 616 PGYGPQGEPGLQGTQ 630
Score = 66.2 bits (160), Expect = 2e-11
Identities = 33/70 (47%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 33 PAVIACSSPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKG 92
P S PG+ G PG G G+KGE+G PG+ G G PG G PG PG G PGP G
Sbjct: 380 PGSPGSSRPGLRGAPGWPGLKGSKGERGRPGKDAMGTPGSPGCAGSPGLPGSPGPPGPPG 439
Query: 93 ----QKGDPG 98
+KG PG
Sbjct: 440 DIVFRKGPPG 449
Score = 65.5 bits (158), Expect = 4e-11
Identities = 34/63 (53%), Positives = 38/63 (60%), Gaps = 5/63 (7%)
Query: 37 ACSSPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGD 96
A SPG G PGK G G G KG ++GL GPPG GPPG PG GSPGP G +GD
Sbjct: 1102 APGSPGSPGLPGKPGPHGDLGFKG-----IKGLLGPPGIRGPPGLPGFPGSPGPMGIRGD 1156
Query: 97 PGK 99
G+
Sbjct: 1157 QGR 1159
Score = 65.1 bits (157), Expect = 5e-11
Identities = 34/71 (47%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 33 PAVIACSSPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKG 92
PAV PG GFPG+ G G GE G PG L GL G PG G G G G PGP G
Sbjct: 744 PAVAMPGGPGTPGFPGERGNSGEHGEIGLPG--LPGLPGTPGNEGLDGPRGDPGQPGPPG 801
Query: 93 QKGDPGKSPDG 103
++G PG+ +G
Sbjct: 802 EQGPPGRCIEG 812
Score = 62.4 bits (150), Expect = 4e-10
Identities = 32/74 (43%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGK 99
PG+ GF G G G +G G PG +GL+GL GP G GP G+ G +G+PG G +G PG
Sbjct: 957 PGLKGFAGNPGEKGNRGVPGMPGLKGLKGLPGPAGPPGPRGDLGSTGNPGEPGLRGIPGS 1016
Query: 100 SPDGDSSLAASERK 113
G+ + S+ K
Sbjct: 1017 M--GNMGMPGSKGK 1028
Score = 62.4 bits (150), Expect = 4e-10
Identities = 31/59 (52%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDP 97
SPG G PG+ G G G G PG G G +G PGK G PG PGP+G G KG KG+P
Sbjct: 1359 SPGPPGTPGEPGMQGEPGPPGPPGNLGPCGPRGKPGKDGKPGTPGPAGEKGNKGSKGEP 1417
Score = 62.0 bits (149), Expect = 5e-10
Identities = 44/115 (38%), Positives = 56/115 (48%), Gaps = 23/115 (20%)
Query: 7 LPLLLLSMVAA-SYSETVTCED-------------AQKTCPAVIACSSPGINGFPGKDGR 52
LPLLL+ + AA + S+ C+D +K P SPG GF G +G
Sbjct: 14 LPLLLVLLAAAPAASKGCVCKDKGQCFCDGAKGEKGEKGFPG--PPGSPGQKGFTGPEGL 71
Query: 53 DGTKGEKGEPG-------QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGKS 100
G +G KG PG +G+RG+ G PG G PG PG G+ GP G G PG S
Sbjct: 72 PGPQGPKGFPGLPGLTGSKGVRGISGLPGFSGSPGLPGTPGNTGPYGLVGVPGCS 126
Score = 62.0 bits (149), Expect = 5e-10
Identities = 33/70 (47%), Positives = 36/70 (51%), Gaps = 12/70 (17%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ------------GLRGLQGPPGKLGPPGNPGPSGSP 88
PG G+PG G G KG+KG P + GL G GP G GPPG PGP G P
Sbjct: 138 PGTLGYPGIPGAAGLKGQKGAPAKEEDIELDAKGDPGLPGAPGPQGLPGPPGFPGPVGPP 197
Query: 89 GPKGQKGDPG 98
GP G G PG
Sbjct: 198 GPPGFFGFPG 207
Score = 61.6 bits (148), Expect = 6e-10
Identities = 35/73 (47%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ--GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
PG GFPG G G KGEKGE Q G G+ G PG G PG G G PG G KG PG
Sbjct: 522 PGFPGFPGAQGDPGLKGEKGETLQPEGQVGVPGDPGLRGQPGRKGLDGIPGTPGVKGLPG 581
Query: 99 KSPDGDSSLAASE 111
P G+ +L+ +
Sbjct: 582 --PKGELALSGEK 592
Score = 61.6 bits (148), Expect = 6e-10
Identities = 29/58 (50%), Positives = 34/58 (58%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
PG+NG G+ GR G G KG+PG G PG+ G PG PG G GP GQ+G PG
Sbjct: 820 PGLNGLKGQQGRRGKTGPKGDPGIPGLDRSGFPGETGSPGIPGHQGEMGPLGQRGYPG 877
Score = 59.7 bits (143), Expect = 2e-09
Identities = 35/78 (44%), Positives = 41/78 (52%), Gaps = 12/78 (15%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQ-GLRG-------LQGPPGKLGPPGNPGPSGS---PGP 90
G G PG G G G G PG+ G RG + GPPG GPPG+PGP G PG
Sbjct: 619 GPQGEPGLQGTQGVPGAPGPPGEAGPRGELSVSTPVPGPPGPPGPPGHPGPQGPPGIPGS 678
Query: 91 KGQKGDPG-KSPDGDSSL 107
G+ GDPG PDG+ +
Sbjct: 679 LGKCGDPGLPGPDGEPGI 696
Score = 59.3 bits (142), Expect = 3e-09
Identities = 30/66 (45%), Positives = 37/66 (56%), Gaps = 7/66 (10%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPG-------QGLRGLQGPPGKLGPPGNPGPSGSPGPKG 92
SPGI G G+ G G +G G PG G+ G+ G PG +GPPG PG G+PG +G
Sbjct: 857 SPGIPGHQGEMGPLGQRGYPGNPGILGPPGEDGVIGMMGFPGAIGPPGPPGNPGTPGQRG 916
Query: 93 QKGDPG 98
G PG
Sbjct: 917 SPGIPG 922
Score = 59.3 bits (142), Expect = 3e-09
Identities = 29/58 (50%), Positives = 31/58 (53%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
PG G PG G G +G+KGEPG GPPG G PG PG G G GQ G PG
Sbjct: 1035 PGRAGRPGLPGIHGLQGDKGEPGYSEGTRPGPPGPTGDPGLPGDMGKKGEMGQPGPPG 1092
Score = 59.3 bits (142), Expect = 3e-09
Identities = 33/74 (44%), Positives = 38/74 (51%), Gaps = 16/74 (21%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG-------QGLRGLQGPPGKLGP---------PGNPGP 84
PG G PG G G KGEKG PG G G +GPPG G PG+PGP
Sbjct: 1303 PGPRGDPGFQGFPGVKGEKGNPGFLGSIGPPGPIGPKGPPGVRGDPGTLKIISLPGSPGP 1362
Query: 85 SGSPGPKGQKGDPG 98
G+PG G +G+PG
Sbjct: 1363 PGTPGEPGMQGEPG 1376
Score = 58.9 bits (141), Expect = 4e-09
Identities = 31/75 (41%), Positives = 37/75 (49%), Gaps = 12/75 (16%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG------------QGLRGLQGPPGKLGPPGNPGPSGSP 88
PG+ G PG +G DG +G+ G+PG +G RG QG PG G G G G
Sbjct: 776 PGLPGTPGNEGLDGPRGDPGQPGPPGEQGPPGRCIEGPRGAQGLPGLNGLKGQQGRRGKT 835
Query: 89 GPKGQKGDPGKSPDG 103
GPKG G PG G
Sbjct: 836 GPKGDPGIPGLDRSG 850
Score = 58.2 bits (139), Expect = 7e-09
Identities = 38/103 (36%), Positives = 48/103 (46%), Gaps = 23/103 (22%)
Query: 37 ACSSPGINGFPGKD------GRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPS---- 85
A PG+ G PGKD G +G KG +G PG G G++G G +GPPG GP+
Sbjct: 289 APGDPGLQGKPGKDGVPGFPGSEGVKGNRGFPGLMGEDGIKGQKGDIGPPGFRGPTEYYD 348
Query: 86 -----------GSPGPKGQKGDPGKS-PDGDSSLAASERKALQ 116
G PGP+G +G G S P G S R L+
Sbjct: 349 TYQEKGDEGTPGPPGPRGARGPQGPSGPPGVPGSPGSSRPGLR 391
Score = 57.8 bits (138), Expect = 9e-09
Identities = 32/72 (44%), Positives = 38/72 (52%), Gaps = 13/72 (18%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG----QGLRGLQGPPGKLGPPGNPGPS---------GS 87
PG G PG G GT G++G PG +G RG G G+ G GNPGPS G
Sbjct: 897 PGAIGPPGPPGNPGTPGQRGSPGIPGVKGQRGTPGAKGEQGDKGNPGPSEISHVIGDKGE 956
Query: 88 PGPKGQKGDPGK 99
PG KG G+PG+
Sbjct: 957 PGLKGFAGNPGE 968
Score = 57.4 bits (137), Expect = 1e-08
Identities = 34/83 (40%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Query: 27 DAQKTCPAVIACSSPGINGFPGKDGRDGTKGEKGEPGQ----GLRGLQGPPGKLGPPGNP 82
D K P ++ P I G PG G G G KG PG+ GL+G G PG G PG P
Sbjct: 466 DGPKGEPGLLCTQCPYIPGPPGLPGLPGLHGVKGIPGRQGAAGLKGSPGSPGNTGLPGFP 525
Query: 83 GPSGSPGPKGQKGDPGKS--PDG 103
G G+ G G KG+ G++ P+G
Sbjct: 526 GFPGAQGDPGLKGEKGETLQPEG 548
Score = 57.0 bits (136), Expect = 1e-08
Identities = 29/59 (49%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
PG G PG G G +G+ G G G++G +G PG LG G PGP G GP G +GDPG
Sbjct: 1291 PGRLGAPGTPGLPGPRGDPGFQGFPGVKGEKGNPGFLGSIGPPGPIGPKGPPGVRGDPG 1349
Score = 56.6 bits (135), Expect = 2e-08
Identities = 32/64 (50%), Positives = 33/64 (51%), Gaps = 10/64 (15%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGKS 100
PG G PG G G KGE G+PG PPG LGP G G GSPG G G PG
Sbjct: 1067 PGPTGDPGLPGDMGKKGEMGQPG--------PPGHLGPAGPEGAPGSPGSPGLPGKPG-- 1116
Query: 101 PDGD 104
P GD
Sbjct: 1117 PHGD 1120
Score = 55.5 bits (132), Expect = 4e-08
Identities = 34/77 (44%), Positives = 38/77 (49%), Gaps = 18/77 (23%)
Query: 40 SPGINGFPGKDGRD-----GTKGEKGEPGQ----GLRGLQGPPGKLGPP---------GN 81
SPG G PG G G KG G PG G G GPPG+LG P G+
Sbjct: 1249 SPGAPGPPGPPGSHVIGIKGDKGSMGHPGPKGPPGTAGDMGPPGRLGAPGTPGLPGPRGD 1308
Query: 82 PGPSGSPGPKGQKGDPG 98
PG G PG KG+KG+PG
Sbjct: 1309 PGFQGFPGVKGEKGNPG 1325
Score = 55.1 bits (131), Expect = 6e-08
Identities = 34/83 (40%), Positives = 36/83 (43%), Gaps = 14/83 (16%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQG------LRGLQGPPGKLGPPGNPGPSGS-------P 88
G G PG G G G G PG G L+G QG PG GPPG GP G P
Sbjct: 596 GPPGDPGSPGSPGPAGPAGPPGYGPQGEPGLQGTQGVPGAPGPPGEAGPRGELSVSTPVP 655
Query: 89 GPKGQKGDPG-KSPDGDSSLAAS 110
GP G G PG P G + S
Sbjct: 656 GPPGPPGPPGHPGPQGPPGIPGS 678
Score = 54.7 bits (130), Expect = 7e-08
Identities = 32/79 (40%), Positives = 42/79 (53%), Gaps = 10/79 (12%)
Query: 40 SPGINGFPGKDGR---DGTKGEKGEPGQ-GLRGLQGPPGKLGPPG-----NPGPSGSPGP 90
+PG+ G PG G G KG++G PG G G GP G GPPG PG G+ G
Sbjct: 573 TPGVKGLPGPKGELALSGEKGDQGPPGDPGSPGSPGPAGPAGPPGYGPQGEPGLQGTQGV 632
Query: 91 KGQKGDPGKS-PDGDSSLA 108
G G PG++ P G+ S++
Sbjct: 633 PGAPGPPGEAGPRGELSVS 651
Score = 54.7 bits (130), Expect = 7e-08
Identities = 29/58 (50%), Positives = 31/58 (53%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
PGI G GK G G G GEPG G GPPG G G PG GS G G+ G+PG
Sbjct: 673 PGIPGSLGKCGDPGLPGPDGEPGIPGIGFPGPPGPKGDQGFPGTKGSLGCPGKMGEPG 730
Score = 53.9 bits (128), Expect = 1e-07
Identities = 31/78 (39%), Positives = 38/78 (48%), Gaps = 13/78 (16%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGP------------SGS 87
PG+ G PG G G PG G G+QG PG GPPGN GP G+
Sbjct: 1342 PGVRGDPGTLKIISLPGSPGPPGTPGEPGMQGEPGPPGPPGNLGPCGPRGKPGKDGKPGT 1401
Query: 88 PGPKGQKGDPGKSPDGDS 105
PGP G+KG+ G + +S
Sbjct: 1402 PGPAGEKGNKGSKGEPES 1419
Score = 52.8 bits (125), Expect = 3e-07
Identities = 33/88 (37%), Positives = 37/88 (42%), Gaps = 24/88 (27%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPG---------------QGLRGLQGPPGKLGPPGNPGP 84
+PG G PG+ G G G +G G G G +GPPG G PG PGP
Sbjct: 1196 APGFPGLPGRKGAMGDAGPRGPTGIEGFPGPPGLPGAIIPGQTGNRGPPGSRGSPGAPGP 1255
Query: 85 SGSP--------GPKGQKGDPG-KSPDG 103
G P G KG G PG K P G
Sbjct: 1256 PGPPGSHVIGIKGDKGSMGHPGPKGPPG 1283
Score = 52.4 bits (124), Expect = 4e-07
Identities = 33/92 (35%), Positives = 37/92 (40%), Gaps = 25/92 (27%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPG-----------------KLGPPGNPG 83
PG G G G G G G PG GL+G PG +G PG+PG
Sbjct: 362 PGPRGARGPQGPSGPPGVPGSPGSSRPGLRGAPGWPGLKGSKGERGRPGKDAMGTPGSPG 421
Query: 84 PSGSPGPKGQKGDPG--------KSPDGDSSL 107
+GSPG G G PG K P GD L
Sbjct: 422 CAGSPGLPGSPGPPGPPGDIVFRKGPPGDHGL 453
Score = 52.4 bits (124), Expect = 4e-07
Identities = 34/82 (41%), Positives = 40/82 (48%), Gaps = 17/82 (20%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPG-------------QGLRGLQGPPGKLGPPGNPGPSG 86
SPGI G G+ G G KGE+G+ G +G GL+G G G GN G G
Sbjct: 917 SPGIPGVKGQRGTPGAKGEQGDKGNPGPSEISHVIGDKGEPGLKGFAGNPGEKGNRGVPG 976
Query: 87 SPGPKGQKGDPGKS----PDGD 104
PG KG KG PG + P GD
Sbjct: 977 MPGLKGLKGLPGPAGPPGPRGD 998
Score = 52.4 bits (124), Expect = 4e-07
Identities = 26/67 (38%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 33 PAVIACSSPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKG 92
P I G G PG G G G G PG + G++G G +G +PGP G PG G
Sbjct: 1230 PGAIIPGQTGNRGPPGSRGSPGAPGPPGPPGSHVIGIKGDKGSMG---HPGPKGPPGTAG 1286
Query: 93 QKGDPGK 99
G PG+
Sbjct: 1287 DMGPPGR 1293
Score = 52.0 bits (123), Expect = 5e-07
Identities = 33/79 (41%), Positives = 36/79 (45%), Gaps = 12/79 (15%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNP--------GPSGSPGPKG 92
PG GFPG G G KG GE G +G +G G GPPG P GP KG
Sbjct: 200 PGFFGFPGAMGPRGPKGHMGERVIGHKGERGVKGLTGPPGPPGTVIVTLTGPDNRTDLKG 259
Query: 93 QKGDPG----KSPDGDSSL 107
+KGD G P G S L
Sbjct: 260 EKGDKGAMGEPGPPGPSGL 278
Score = 52.0 bits (123), Expect = 5e-07
Identities = 33/66 (50%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGS---PGPKGQKGD 96
PG G G GR G G G PG +G G QG PG G GNPG GS PGP G KG
Sbjct: 1282 PGTAGDMGPPGRLGAPGTPGLPGPRGDPGFQGFPGVKGEKGNPGFLGSIGPPGPIGPKGP 1341
Query: 97 PGKSPD 102
PG D
Sbjct: 1342 PGVRGD 1347
Score = 51.2 bits (121), Expect = 8e-07
Identities = 32/80 (40%), Positives = 40/80 (50%), Gaps = 16/80 (20%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG------------QGLRGLQGPPGKLGPPGNPGPSGSP 88
PG G PG G+ G G KGEP G RG G G++G PG PG G+P
Sbjct: 723 PGKMGEPGLPGKPGLPGAKGEPAVAMPGGPGTPGFPGERGNSGEHGEIGLPGLPGLPGTP 782
Query: 89 GPK---GQKGDPGK-SPDGD 104
G + G +GDPG+ P G+
Sbjct: 783 GNEGLDGPRGDPGQPGPPGE 802
Score = 50.1 bits (118), Expect = 2e-06
Identities = 30/62 (48%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ----GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGD 96
PG G PG G G +G G PG G GL GP G+ G PG P G PGPKG +G
Sbjct: 655 PGPPGPPGPPGHPGPQGPPGIPGSLGKCGDPGLPGPDGEPGIPGIGFP-GPPGPKGDQGF 713
Query: 97 PG 98
PG
Sbjct: 714 PG 715
Score = 50.1 bits (118), Expect = 2e-06
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQ----GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDP 97
G+ G PG G G +G+ G G GLRG+ G G +G PG+ G G+ G G+ G P
Sbjct: 982 GLKGLPGPAGPPGPRGDLGSTGNPGEPGLRGIPGSMGNMGMPGSKGKRGTLGFPGRAGRP 1041
Query: 98 G 98
G
Sbjct: 1042 G 1042
Score = 49.7 bits (117), Expect = 2e-06
Identities = 34/82 (41%), Positives = 36/82 (43%), Gaps = 25/82 (30%)
Query: 42 GINGFPGKDGRDGTKGE----------KGEPGQ-GLRGLQGPPG------KLGPPGNPGP 84
G+ G PG G G +GE G PG G G QGPPG K G PG PGP
Sbjct: 631 GVPGAPGPPGEAGPRGELSVSTPVPGPPGPPGPPGHPGPQGPPGIPGSLGKCGDPGLPGP 690
Query: 85 SGS--------PGPKGQKGDPG 98
G PGP G KGD G
Sbjct: 691 DGEPGIPGIGFPGPPGPKGDQG 712
Score = 49.7 bits (117), Expect = 2e-06
Identities = 29/61 (47%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
SPG G G GRDG G GE G+ GL L+ PPG G PG G G G G G PG
Sbjct: 1147 SPGPMGIRGDQGRDGIPGPAGEKGETGL--LRAPPGPRGNPGAQGAKGDRGAPGFPGLPG 1204
Query: 99 K 99
+
Sbjct: 1205 R 1205
Score = 49.7 bits (117), Expect = 2e-06
Identities = 29/71 (40%), Positives = 33/71 (46%), Gaps = 14/71 (19%)
Query: 42 GINGFPGKDGRDGTKGEKGEPG--------------QGLRGLQGPPGKLGPPGNPGPSGS 87
GI G G+DG G GEKGE G QG +G +G PG G PG G G
Sbjct: 1152 GIRGDQGRDGIPGPAGEKGETGLLRAPPGPRGNPGAQGAKGDRGAPGFPGLPGRKGAMGD 1211
Query: 88 PGPKGQKGDPG 98
GP+G G G
Sbjct: 1212 AGPRGPTGIEG 1222
Score = 49.3 bits (116), Expect = 3e-06
Identities = 31/75 (41%), Positives = 36/75 (48%), Gaps = 17/75 (22%)
Query: 38 CSSPGINGFPGKDGR--------DGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSP 88
C PG+ PG DG G G KG+ G G +G G PGK+G PG PG G P
Sbjct: 682 CGDPGL---PGPDGEPGIPGIGFPGPPGPKGDQGFPGTKGSLGCPGKMGEPGLPGKPGLP 738
Query: 89 GPKGQ-----KGDPG 98
G KG+ G PG
Sbjct: 739 GAKGEPAVAMPGGPG 753
Score = 49.3 bits (116), Expect = 3e-06
Identities = 30/76 (39%), Positives = 33/76 (43%), Gaps = 19/76 (25%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSG-------------- 86
PG+ G PG G G G KG+ RG G PG+ G PG PG G
Sbjct: 1008 PGLRGIPGSMGNMGMPGSKGK-----RGTLGFPGRAGRPGLPGIHGLQGDKGEPGYSEGT 1062
Query: 87 SPGPKGQKGDPGKSPD 102
PGP G GDPG D
Sbjct: 1063 RPGPPGPTGDPGLPGD 1078
Score = 48.9 bits (115), Expect = 4e-06
Identities = 30/76 (39%), Positives = 35/76 (46%), Gaps = 9/76 (11%)
Query: 33 PAVIACSSPGINGFPGKDGRDGTKGEKGEPGQ----GLRGLQGPPGKLGP-----PGNPG 83
P + PG G G G GTKG G PG+ GL G G PG G PG PG
Sbjct: 694 PGIPGIGFPGPPGPKGDQGFPGTKGSLGCPGKMGEPGLPGKPGLPGAKGEPAVAMPGGPG 753
Query: 84 PSGSPGPKGQKGDPGK 99
G PG +G G+ G+
Sbjct: 754 TPGFPGERGNSGEHGE 769
Score = 48.5 bits (114), Expect = 5e-06
Identities = 29/60 (48%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGK 99
S G G PG G D GE G PG G G GP G G PG G G PG G+ G PGK
Sbjct: 678 SLGKCGDPGLPGPD---GEPGIPGIGFPGPPGPKGDQGFPGTKGSLGCPGKMGEPGLPGK 734
Score = 47.8 bits (112), Expect = 9e-06
Identities = 34/93 (36%), Positives = 42/93 (45%), Gaps = 19/93 (20%)
Query: 26 EDAQKTCPAVIACSSPGINGFPGKDG-------RDGTKGEKGEPG----QGLRGLQGPPG 74
+DA T + SPG+ G PG G R G G+ G PG G+ G+ GP G
Sbjct: 411 KDAMGTPGSPGCAGSPGLPGSPGPPGPPGDIVFRKGPPGDHGLPGYLGSPGIPGVDGPKG 470
Query: 75 KLG--------PPGNPGPSGSPGPKGQKGDPGK 99
+ G PG PG G PG G KG PG+
Sbjct: 471 EPGLLCTQCPYIPGPPGLPGLPGLHGVKGIPGR 503
Score = 47.8 bits (112), Expect = 9e-06
Identities = 29/66 (43%), Positives = 33/66 (50%), Gaps = 9/66 (13%)
Query: 42 GINGFPGKDGRDGTKGEKGEPG----QGLRGLQGPP-----GKLGPPGNPGPSGSPGPKG 92
G GFPG G G G+ GEPG GL G +G P G G PG PG G+ G G
Sbjct: 709 GDQGFPGTKGSLGCPGKMGEPGLPGKPGLPGAKGEPAVAMPGGPGTPGFPGERGNSGEHG 768
Query: 93 QKGDPG 98
+ G PG
Sbjct: 769 EIGLPG 774
Score = 47.4 bits (111), Expect = 1e-05
Identities = 31/62 (50%), Positives = 32/62 (51%), Gaps = 10/62 (16%)
Query: 42 GINGFPGKDGRDGTKGE-----KGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGD 96
G G PG G G GE KG PG GLQG PGK G PG PG S G KG +G
Sbjct: 265 GAMGEPGPPGPSGLPGESYGSEKGAPGDP--GLQGKPGKDGVPGFPG---SEGVKGNRGF 319
Query: 97 PG 98
PG
Sbjct: 320 PG 321
Score = 47.0 bits (110), Expect = 2e-05
Identities = 28/64 (43%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 41 PGINGFPGKD-----GRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGPSGSPGPKGQK 94
PG +G PG+ G G G +G+PG+ G+ G G G G G PG G G KGQK
Sbjct: 273 PGPSGLPGESYGSEKGAPGDPGLQGKPGKDGVPGFPGSEGVKGNRGFPGLMGEDGIKGQK 332
Query: 95 GDPG 98
GD G
Sbjct: 333 GDIG 336
Score = 43.5 bits (101), Expect = 2e-04
Identities = 24/60 (40%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQGL---RGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
G G G G G G G PG+ +G G PG G PG G G PG +G KG+ G
Sbjct: 259 GEKGDKGAMGEPGPPGPSGLPGESYGSEKGAPGDPGLQGKPGKDGVPGFPGSEGVKGNRG 318
Score = 42.7 bits (99), Expect = 3e-04
Identities = 28/69 (40%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
Query: 29 QKTCPAV---IACSSPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPS 85
QK PA I + G G PG G G G G PG G GPPG G PG GP
Sbjct: 155 QKGAPAKEEDIELDAKGDPGLPGAPGPQGLPGPPGFPGPV--GPPGPPGFFGFPGAMGPR 212
Query: 86 GSPGPKGQK 94
G G G++
Sbjct: 213 GPKGHMGER 221
>gi|89142735 alpha 3 type IV collagen isoform 4 precursor [Homo
sapiens]
Length = 1494
Score = 70.5 bits (171), Expect = 1e-12
Identities = 36/75 (48%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 41 PGINGFPGKDGRDG---TKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGD 96
PG+ G PG+ G DG T G KG PG +G L G G GPPG+PG GSPGP G G
Sbjct: 556 PGLRGQPGRKGLDGIPGTPGVKGLPGPKGELALSGEKGDQGPPGDPGSPGSPGPAGPAGP 615
Query: 97 PGKSPDGDSSLAASE 111
PG P G+ L ++
Sbjct: 616 PGYGPQGEPGLQGTQ 630
Score = 66.2 bits (160), Expect = 2e-11
Identities = 33/70 (47%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 33 PAVIACSSPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKG 92
P S PG+ G PG G G+KGE+G PG+ G G PG G PG PG G PGP G
Sbjct: 380 PGSPGSSRPGLRGAPGWPGLKGSKGERGRPGKDAMGTPGSPGCAGSPGLPGSPGPPGPPG 439
Query: 93 ----QKGDPG 98
+KG PG
Sbjct: 440 DIVFRKGPPG 449
Score = 65.9 bits (159), Expect = 3e-11
Identities = 36/75 (48%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
SPG G PG+ G G G G PG G G +G PGK G PG PGP+G G KG KG+PG
Sbjct: 1359 SPGPPGTPGEPGMQGEPGPPGPPGNLGPCGPRGKPGKDGKPGTPGPAGEKGNKGSKGEPG 1418
Query: 99 KSPDGDSSLAASERK 113
P G L + K
Sbjct: 1419 --PAGSDGLPGLKGK 1431
Score = 65.5 bits (158), Expect = 4e-11
Identities = 34/63 (53%), Positives = 38/63 (60%), Gaps = 5/63 (7%)
Query: 37 ACSSPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGD 96
A SPG G PGK G G G KG ++GL GPPG GPPG PG GSPGP G +GD
Sbjct: 1102 APGSPGSPGLPGKPGPHGDLGFKG-----IKGLLGPPGIRGPPGLPGFPGSPGPMGIRGD 1156
Query: 97 PGK 99
G+
Sbjct: 1157 QGR 1159
Score = 65.1 bits (157), Expect = 5e-11
Identities = 34/71 (47%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 33 PAVIACSSPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKG 92
PAV PG GFPG+ G G GE G PG L GL G PG G G G G PGP G
Sbjct: 744 PAVAMPGGPGTPGFPGERGNSGEHGEIGLPG--LPGLPGTPGNEGLDGPRGDPGQPGPPG 801
Query: 93 QKGDPGKSPDG 103
++G PG+ +G
Sbjct: 802 EQGPPGRCIEG 812
Score = 62.4 bits (150), Expect = 4e-10
Identities = 32/74 (43%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGK 99
PG+ GF G G G +G G PG +GL+GL GP G GP G+ G +G+PG G +G PG
Sbjct: 957 PGLKGFAGNPGEKGNRGVPGMPGLKGLKGLPGPAGPPGPRGDLGSTGNPGEPGLRGIPGS 1016
Query: 100 SPDGDSSLAASERK 113
G+ + S+ K
Sbjct: 1017 M--GNMGMPGSKGK 1028
Score = 62.0 bits (149), Expect = 5e-10
Identities = 44/115 (38%), Positives = 56/115 (48%), Gaps = 23/115 (20%)
Query: 7 LPLLLLSMVAA-SYSETVTCED-------------AQKTCPAVIACSSPGINGFPGKDGR 52
LPLLL+ + AA + S+ C+D +K P SPG GF G +G
Sbjct: 14 LPLLLVLLAAAPAASKGCVCKDKGQCFCDGAKGEKGEKGFPG--PPGSPGQKGFTGPEGL 71
Query: 53 DGTKGEKGEPG-------QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGKS 100
G +G KG PG +G+RG+ G PG G PG PG G+ GP G G PG S
Sbjct: 72 PGPQGPKGFPGLPGLTGSKGVRGISGLPGFSGSPGLPGTPGNTGPYGLVGVPGCS 126
Score = 62.0 bits (149), Expect = 5e-10
Identities = 33/70 (47%), Positives = 36/70 (51%), Gaps = 12/70 (17%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ------------GLRGLQGPPGKLGPPGNPGPSGSP 88
PG G+PG G G KG+KG P + GL G GP G GPPG PGP G P
Sbjct: 138 PGTLGYPGIPGAAGLKGQKGAPAKEEDIELDAKGDPGLPGAPGPQGLPGPPGFPGPVGPP 197
Query: 89 GPKGQKGDPG 98
GP G G PG
Sbjct: 198 GPPGFFGFPG 207
Score = 61.6 bits (148), Expect = 6e-10
Identities = 35/73 (47%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ--GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
PG GFPG G G KGEKGE Q G G+ G PG G PG G G PG G KG PG
Sbjct: 522 PGFPGFPGAQGDPGLKGEKGETLQPEGQVGVPGDPGLRGQPGRKGLDGIPGTPGVKGLPG 581
Query: 99 KSPDGDSSLAASE 111
P G+ +L+ +
Sbjct: 582 --PKGELALSGEK 592
Score = 61.6 bits (148), Expect = 6e-10
Identities = 29/58 (50%), Positives = 34/58 (58%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
PG+NG G+ GR G G KG+PG G PG+ G PG PG G GP GQ+G PG
Sbjct: 820 PGLNGLKGQQGRRGKTGPKGDPGIPGLDRSGFPGETGSPGIPGHQGEMGPLGQRGYPG 877
Score = 61.2 bits (147), Expect = 8e-10
Identities = 33/76 (43%), Positives = 38/76 (50%), Gaps = 20/76 (26%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGP------------------PGNP 82
PG G PG G G KGEKG PG G GPPG +GP PG+P
Sbjct: 1303 PGPRGDPGFQGFPGVKGEKGNPG--FLGSIGPPGPIGPKGPPGVRGDPGTLKIISLPGSP 1360
Query: 83 GPSGSPGPKGQKGDPG 98
GP G+PG G +G+PG
Sbjct: 1361 GPPGTPGEPGMQGEPG 1376
Score = 59.7 bits (143), Expect = 2e-09
Identities = 35/78 (44%), Positives = 41/78 (52%), Gaps = 12/78 (15%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQ-GLRG-------LQGPPGKLGPPGNPGPSGS---PGP 90
G G PG G G G G PG+ G RG + GPPG GPPG+PGP G PG
Sbjct: 619 GPQGEPGLQGTQGVPGAPGPPGEAGPRGELSVSTPVPGPPGPPGPPGHPGPQGPPGIPGS 678
Query: 91 KGQKGDPG-KSPDGDSSL 107
G+ GDPG PDG+ +
Sbjct: 679 LGKCGDPGLPGPDGEPGI 696
Score = 59.3 bits (142), Expect = 3e-09
Identities = 30/66 (45%), Positives = 37/66 (56%), Gaps = 7/66 (10%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPG-------QGLRGLQGPPGKLGPPGNPGPSGSPGPKG 92
SPGI G G+ G G +G G PG G+ G+ G PG +GPPG PG G+PG +G
Sbjct: 857 SPGIPGHQGEMGPLGQRGYPGNPGILGPPGEDGVIGMMGFPGAIGPPGPPGNPGTPGQRG 916
Query: 93 QKGDPG 98
G PG
Sbjct: 917 SPGIPG 922
Score = 59.3 bits (142), Expect = 3e-09
Identities = 29/58 (50%), Positives = 31/58 (53%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
PG G PG G G +G+KGEPG GPPG G PG PG G G GQ G PG
Sbjct: 1035 PGRAGRPGLPGIHGLQGDKGEPGYSEGTRPGPPGPTGDPGLPGDMGKKGEMGQPGPPG 1092
Score = 58.9 bits (141), Expect = 4e-09
Identities = 31/75 (41%), Positives = 37/75 (49%), Gaps = 12/75 (16%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG------------QGLRGLQGPPGKLGPPGNPGPSGSP 88
PG+ G PG +G DG +G+ G+PG +G RG QG PG G G G G
Sbjct: 776 PGLPGTPGNEGLDGPRGDPGQPGPPGEQGPPGRCIEGPRGAQGLPGLNGLKGQQGRRGKT 835
Query: 89 GPKGQKGDPGKSPDG 103
GPKG G PG G
Sbjct: 836 GPKGDPGIPGLDRSG 850
Score = 58.2 bits (139), Expect = 7e-09
Identities = 38/103 (36%), Positives = 48/103 (46%), Gaps = 23/103 (22%)
Query: 37 ACSSPGINGFPGKD------GRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPS---- 85
A PG+ G PGKD G +G KG +G PG G G++G G +GPPG GP+
Sbjct: 289 APGDPGLQGKPGKDGVPGFPGSEGVKGNRGFPGLMGEDGIKGQKGDIGPPGFRGPTEYYD 348
Query: 86 -----------GSPGPKGQKGDPGKS-PDGDSSLAASERKALQ 116
G PGP+G +G G S P G S R L+
Sbjct: 349 TYQEKGDEGTPGPPGPRGARGPQGPSGPPGVPGSPGSSRPGLR 391
Score = 57.8 bits (138), Expect = 9e-09
Identities = 32/72 (44%), Positives = 38/72 (52%), Gaps = 13/72 (18%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG----QGLRGLQGPPGKLGPPGNPGPS---------GS 87
PG G PG G GT G++G PG +G RG G G+ G GNPGPS G
Sbjct: 897 PGAIGPPGPPGNPGTPGQRGSPGIPGVKGQRGTPGAKGEQGDKGNPGPSEISHVIGDKGE 956
Query: 88 PGPKGQKGDPGK 99
PG KG G+PG+
Sbjct: 957 PGLKGFAGNPGE 968
Score = 57.4 bits (137), Expect = 1e-08
Identities = 34/83 (40%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Query: 27 DAQKTCPAVIACSSPGINGFPGKDGRDGTKGEKGEPGQ----GLRGLQGPPGKLGPPGNP 82
D K P ++ P I G PG G G G KG PG+ GL+G G PG G PG P
Sbjct: 466 DGPKGEPGLLCTQCPYIPGPPGLPGLPGLHGVKGIPGRQGAAGLKGSPGSPGNTGLPGFP 525
Query: 83 GPSGSPGPKGQKGDPGKS--PDG 103
G G+ G G KG+ G++ P+G
Sbjct: 526 GFPGAQGDPGLKGEKGETLQPEG 548
Score = 57.0 bits (136), Expect = 1e-08
Identities = 29/59 (49%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
PG G PG G G +G+ G G G++G +G PG LG G PGP G GP G +GDPG
Sbjct: 1291 PGRLGAPGTPGLPGPRGDPGFQGFPGVKGEKGNPGFLGSIGPPGPIGPKGPPGVRGDPG 1349
Score = 56.6 bits (135), Expect = 2e-08
Identities = 32/64 (50%), Positives = 33/64 (51%), Gaps = 10/64 (15%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGKS 100
PG G PG G G KGE G+PG PPG LGP G G GSPG G G PG
Sbjct: 1067 PGPTGDPGLPGDMGKKGEMGQPG--------PPGHLGPAGPEGAPGSPGSPGLPGKPG-- 1116
Query: 101 PDGD 104
P GD
Sbjct: 1117 PHGD 1120
Score = 55.5 bits (132), Expect = 4e-08
Identities = 30/62 (48%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 40 SPGINGFPGKDGRD--GTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGD 96
SPG G PG G G KG+KG G G +G G G +GPPG G G+PG G +GD
Sbjct: 1249 SPGAPGPPGPPGSHVIGIKGDKGSMGHPGPKGPPGTAGDMGPPGRLGAPGTPGLPGPRGD 1308
Query: 97 PG 98
PG
Sbjct: 1309 PG 1310
Score = 55.1 bits (131), Expect = 6e-08
Identities = 34/83 (40%), Positives = 36/83 (43%), Gaps = 14/83 (16%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQG------LRGLQGPPGKLGPPGNPGPSGS-------P 88
G G PG G G G G PG G L+G QG PG GPPG GP G P
Sbjct: 596 GPPGDPGSPGSPGPAGPAGPPGYGPQGEPGLQGTQGVPGAPGPPGEAGPRGELSVSTPVP 655
Query: 89 GPKGQKGDPG-KSPDGDSSLAAS 110
GP G G PG P G + S
Sbjct: 656 GPPGPPGPPGHPGPQGPPGIPGS 678
Score = 54.7 bits (130), Expect = 7e-08
Identities = 32/79 (40%), Positives = 42/79 (53%), Gaps = 10/79 (12%)
Query: 40 SPGINGFPGKDGR---DGTKGEKGEPGQ-GLRGLQGPPGKLGPPG-----NPGPSGSPGP 90
+PG+ G PG G G KG++G PG G G GP G GPPG PG G+ G
Sbjct: 573 TPGVKGLPGPKGELALSGEKGDQGPPGDPGSPGSPGPAGPAGPPGYGPQGEPGLQGTQGV 632
Query: 91 KGQKGDPGKS-PDGDSSLA 108
G G PG++ P G+ S++
Sbjct: 633 PGAPGPPGEAGPRGELSVS 651
Score = 54.7 bits (130), Expect = 7e-08
Identities = 29/58 (50%), Positives = 31/58 (53%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
PGI G GK G G G GEPG G GPPG G G PG GS G G+ G+PG
Sbjct: 673 PGIPGSLGKCGDPGLPGPDGEPGIPGIGFPGPPGPKGDQGFPGTKGSLGCPGKMGEPG 730
Score = 52.8 bits (125), Expect = 3e-07
Identities = 33/88 (37%), Positives = 37/88 (42%), Gaps = 24/88 (27%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPG---------------QGLRGLQGPPGKLGPPGNPGP 84
+PG G PG+ G G G +G G G G +GPPG G PG PGP
Sbjct: 1196 APGFPGLPGRKGAMGDAGPRGPTGIEGFPGPPGLPGAIIPGQTGNRGPPGSRGSPGAPGP 1255
Query: 85 SGSP--------GPKGQKGDPG-KSPDG 103
G P G KG G PG K P G
Sbjct: 1256 PGPPGSHVIGIKGDKGSMGHPGPKGPPG 1283
Score = 52.4 bits (124), Expect = 4e-07
Identities = 33/92 (35%), Positives = 37/92 (40%), Gaps = 25/92 (27%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPG-----------------KLGPPGNPG 83
PG G G G G G G PG GL+G PG +G PG+PG
Sbjct: 362 PGPRGARGPQGPSGPPGVPGSPGSSRPGLRGAPGWPGLKGSKGERGRPGKDAMGTPGSPG 421
Query: 84 PSGSPGPKGQKGDPG--------KSPDGDSSL 107
+GSPG G G PG K P GD L
Sbjct: 422 CAGSPGLPGSPGPPGPPGDIVFRKGPPGDHGL 453
Score = 52.4 bits (124), Expect = 4e-07
Identities = 34/82 (41%), Positives = 40/82 (48%), Gaps = 17/82 (20%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPG-------------QGLRGLQGPPGKLGPPGNPGPSG 86
SPGI G G+ G G KGE+G+ G +G GL+G G G GN G G
Sbjct: 917 SPGIPGVKGQRGTPGAKGEQGDKGNPGPSEISHVIGDKGEPGLKGFAGNPGEKGNRGVPG 976
Query: 87 SPGPKGQKGDPGKS----PDGD 104
PG KG KG PG + P GD
Sbjct: 977 MPGLKGLKGLPGPAGPPGPRGD 998
Score = 52.4 bits (124), Expect = 4e-07
Identities = 26/67 (38%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 33 PAVIACSSPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKG 92
P I G G PG G G G G PG + G++G G +G +PGP G PG G
Sbjct: 1230 PGAIIPGQTGNRGPPGSRGSPGAPGPPGPPGSHVIGIKGDKGSMG---HPGPKGPPGTAG 1286
Query: 93 QKGDPGK 99
G PG+
Sbjct: 1287 DMGPPGR 1293
Score = 52.0 bits (123), Expect = 5e-07
Identities = 33/79 (41%), Positives = 36/79 (45%), Gaps = 12/79 (15%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNP--------GPSGSPGPKG 92
PG GFPG G G KG GE G +G +G G GPPG P GP KG
Sbjct: 200 PGFFGFPGAMGPRGPKGHMGERVIGHKGERGVKGLTGPPGPPGTVIVTLTGPDNRTDLKG 259
Query: 93 QKGDPG----KSPDGDSSL 107
+KGD G P G S L
Sbjct: 260 EKGDKGAMGEPGPPGPSGL 278
Score = 52.0 bits (123), Expect = 5e-07
Identities = 33/66 (50%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGS---PGPKGQKGD 96
PG G G GR G G G PG +G G QG PG G GNPG GS PGP G KG
Sbjct: 1282 PGTAGDMGPPGRLGAPGTPGLPGPRGDPGFQGFPGVKGEKGNPGFLGSIGPPGPIGPKGP 1341
Query: 97 PGKSPD 102
PG D
Sbjct: 1342 PGVRGD 1347
Score = 51.2 bits (121), Expect = 8e-07
Identities = 32/80 (40%), Positives = 40/80 (50%), Gaps = 16/80 (20%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG------------QGLRGLQGPPGKLGPPGNPGPSGSP 88
PG G PG G+ G G KGEP G RG G G++G PG PG G+P
Sbjct: 723 PGKMGEPGLPGKPGLPGAKGEPAVAMPGGPGTPGFPGERGNSGEHGEIGLPGLPGLPGTP 782
Query: 89 GPK---GQKGDPGK-SPDGD 104
G + G +GDPG+ P G+
Sbjct: 783 GNEGLDGPRGDPGQPGPPGE 802
Score = 50.8 bits (120), Expect = 1e-06
Identities = 30/68 (44%), Positives = 34/68 (50%), Gaps = 10/68 (14%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQ----GLRGLQGPPGK------LGPPGNPGPSGSPGPK 91
G G PG G G G +G+PG L G GPPG G PG PGP G+ GP
Sbjct: 1328 GSIGPPGPIGPKGPPGVRGDPGTLKIISLPGSPGPPGTPGEPGMQGEPGPPGPPGNLGPC 1387
Query: 92 GQKGDPGK 99
G +G PGK
Sbjct: 1388 GPRGKPGK 1395
Score = 50.1 bits (118), Expect = 2e-06
Identities = 30/62 (48%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ----GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGD 96
PG G PG G G +G G PG G GL GP G+ G PG P G PGPKG +G
Sbjct: 655 PGPPGPPGPPGHPGPQGPPGIPGSLGKCGDPGLPGPDGEPGIPGIGFP-GPPGPKGDQGF 713
Query: 97 PG 98
PG
Sbjct: 714 PG 715
Score = 50.1 bits (118), Expect = 2e-06
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQ----GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDP 97
G+ G PG G G +G+ G G GLRG+ G G +G PG+ G G+ G G+ G P
Sbjct: 982 GLKGLPGPAGPPGPRGDLGSTGNPGEPGLRGIPGSMGNMGMPGSKGKRGTLGFPGRAGRP 1041
Query: 98 G 98
G
Sbjct: 1042 G 1042
Score = 49.7 bits (117), Expect = 2e-06
Identities = 34/82 (41%), Positives = 36/82 (43%), Gaps = 25/82 (30%)
Query: 42 GINGFPGKDGRDGTKGE----------KGEPGQ-GLRGLQGPPG------KLGPPGNPGP 84
G+ G PG G G +GE G PG G G QGPPG K G PG PGP
Sbjct: 631 GVPGAPGPPGEAGPRGELSVSTPVPGPPGPPGPPGHPGPQGPPGIPGSLGKCGDPGLPGP 690
Query: 85 SGS--------PGPKGQKGDPG 98
G PGP G KGD G
Sbjct: 691 DGEPGIPGIGFPGPPGPKGDQG 712
Score = 49.7 bits (117), Expect = 2e-06
Identities = 29/61 (47%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
SPG G G GRDG G GE G+ GL L+ PPG G PG G G G G G PG
Sbjct: 1147 SPGPMGIRGDQGRDGIPGPAGEKGETGL--LRAPPGPRGNPGAQGAKGDRGAPGFPGLPG 1204
Query: 99 K 99
+
Sbjct: 1205 R 1205
Score = 49.7 bits (117), Expect = 2e-06
Identities = 29/71 (40%), Positives = 33/71 (46%), Gaps = 14/71 (19%)
Query: 42 GINGFPGKDGRDGTKGEKGEPG--------------QGLRGLQGPPGKLGPPGNPGPSGS 87
GI G G+DG G GEKGE G QG +G +G PG G PG G G
Sbjct: 1152 GIRGDQGRDGIPGPAGEKGETGLLRAPPGPRGNPGAQGAKGDRGAPGFPGLPGRKGAMGD 1211
Query: 88 PGPKGQKGDPG 98
GP+G G G
Sbjct: 1212 AGPRGPTGIEG 1222
Score = 49.3 bits (116), Expect = 3e-06
Identities = 31/75 (41%), Positives = 36/75 (48%), Gaps = 17/75 (22%)
Query: 38 CSSPGINGFPGKDGR--------DGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSP 88
C PG+ PG DG G G KG+ G G +G G PGK+G PG PG G P
Sbjct: 682 CGDPGL---PGPDGEPGIPGIGFPGPPGPKGDQGFPGTKGSLGCPGKMGEPGLPGKPGLP 738
Query: 89 GPKGQ-----KGDPG 98
G KG+ G PG
Sbjct: 739 GAKGEPAVAMPGGPG 753
Score = 49.3 bits (116), Expect = 3e-06
Identities = 30/76 (39%), Positives = 33/76 (43%), Gaps = 19/76 (25%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSG-------------- 86
PG+ G PG G G G KG+ RG G PG+ G PG PG G
Sbjct: 1008 PGLRGIPGSMGNMGMPGSKGK-----RGTLGFPGRAGRPGLPGIHGLQGDKGEPGYSEGT 1062
Query: 87 SPGPKGQKGDPGKSPD 102
PGP G GDPG D
Sbjct: 1063 RPGPPGPTGDPGLPGD 1078
Score = 48.9 bits (115), Expect = 4e-06
Identities = 30/76 (39%), Positives = 35/76 (46%), Gaps = 9/76 (11%)
Query: 33 PAVIACSSPGINGFPGKDGRDGTKGEKGEPGQ----GLRGLQGPPGKLGP-----PGNPG 83
P + PG G G G GTKG G PG+ GL G G PG G PG PG
Sbjct: 694 PGIPGIGFPGPPGPKGDQGFPGTKGSLGCPGKMGEPGLPGKPGLPGAKGEPAVAMPGGPG 753
Query: 84 PSGSPGPKGQKGDPGK 99
G PG +G G+ G+
Sbjct: 754 TPGFPGERGNSGEHGE 769
Score = 48.5 bits (114), Expect = 5e-06
Identities = 29/60 (48%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGK 99
S G G PG G D GE G PG G G GP G G PG G G PG G+ G PGK
Sbjct: 678 SLGKCGDPGLPGPD---GEPGIPGIGFPGPPGPKGDQGFPGTKGSLGCPGKMGEPGLPGK 734
Score = 47.8 bits (112), Expect = 9e-06
Identities = 34/93 (36%), Positives = 42/93 (45%), Gaps = 19/93 (20%)
Query: 26 EDAQKTCPAVIACSSPGINGFPGKDG-------RDGTKGEKGEPG----QGLRGLQGPPG 74
+DA T + SPG+ G PG G R G G+ G PG G+ G+ GP G
Sbjct: 411 KDAMGTPGSPGCAGSPGLPGSPGPPGPPGDIVFRKGPPGDHGLPGYLGSPGIPGVDGPKG 470
Query: 75 KLG--------PPGNPGPSGSPGPKGQKGDPGK 99
+ G PG PG G PG G KG PG+
Sbjct: 471 EPGLLCTQCPYIPGPPGLPGLPGLHGVKGIPGR 503
Score = 47.8 bits (112), Expect = 9e-06
Identities = 29/66 (43%), Positives = 33/66 (50%), Gaps = 9/66 (13%)
Query: 42 GINGFPGKDGRDGTKGEKGEPG----QGLRGLQGPP-----GKLGPPGNPGPSGSPGPKG 92
G GFPG G G G+ GEPG GL G +G P G G PG PG G+ G G
Sbjct: 709 GDQGFPGTKGSLGCPGKMGEPGLPGKPGLPGAKGEPAVAMPGGPGTPGFPGERGNSGEHG 768
Query: 93 QKGDPG 98
+ G PG
Sbjct: 769 EIGLPG 774
Score = 47.4 bits (111), Expect = 1e-05
Identities = 31/62 (50%), Positives = 32/62 (51%), Gaps = 10/62 (16%)
Query: 42 GINGFPGKDGRDGTKGE-----KGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGD 96
G G PG G G GE KG PG GLQG PGK G PG PG S G KG +G
Sbjct: 265 GAMGEPGPPGPSGLPGESYGSEKGAPGDP--GLQGKPGKDGVPGFPG---SEGVKGNRGF 319
Query: 97 PG 98
PG
Sbjct: 320 PG 321
Score = 47.0 bits (110), Expect = 2e-05
Identities = 28/64 (43%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 41 PGINGFPGKD-----GRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGPSGSPGPKGQK 94
PG +G PG+ G G G +G+PG+ G+ G G G G G PG G G KGQK
Sbjct: 273 PGPSGLPGESYGSEKGAPGDPGLQGKPGKDGVPGFPGSEGVKGNRGFPGLMGEDGIKGQK 332
Query: 95 GDPG 98
GD G
Sbjct: 333 GDIG 336
Score = 47.0 bits (110), Expect = 2e-05
Identities = 26/57 (45%), Positives = 32/57 (56%), Gaps = 8/57 (14%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
G G PGKDG+ GT G GE G +G G+ GP G+ G PG KG++GD G
Sbjct: 1388 GPRGKPGKDGKPGTPGPAGEKGN-----KGSKGEPGPAGS---DGLPGLKGKRGDSG 1436
Score = 43.5 bits (101), Expect = 2e-04
Identities = 24/60 (40%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQGL---RGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
G G G G G G G PG+ +G G PG G PG G G PG +G KG+ G
Sbjct: 259 GEKGDKGAMGEPGPPGPSGLPGESYGSEKGAPGDPGLQGKPGKDGVPGFPGSEGVKGNRG 318
Score = 42.7 bits (99), Expect = 3e-04
Identities = 28/69 (40%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
Query: 29 QKTCPAV---IACSSPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPS 85
QK PA I + G G PG G G G G PG G GPPG G PG GP
Sbjct: 155 QKGAPAKEEDIELDAKGDPGLPGAPGPQGLPGPPGFPGPV--GPPGPPGFFGFPGAMGPR 212
Query: 86 GSPGPKGQK 94
G G G++
Sbjct: 213 GPKGHMGER 221
>gi|89142733 alpha 3 type IV collagen isoform 2 precursor [Homo
sapiens]
Length = 1637
Score = 70.5 bits (171), Expect = 1e-12
Identities = 36/75 (48%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 41 PGINGFPGKDGRDG---TKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGD 96
PG+ G PG+ G DG T G KG PG +G L G G GPPG+PG GSPGP G G
Sbjct: 556 PGLRGQPGRKGLDGIPGTPGVKGLPGPKGELALSGEKGDQGPPGDPGSPGSPGPAGPAGP 615
Query: 97 PGKSPDGDSSLAASE 111
PG P G+ L ++
Sbjct: 616 PGYGPQGEPGLQGTQ 630
Score = 66.2 bits (160), Expect = 2e-11
Identities = 33/70 (47%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 33 PAVIACSSPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKG 92
P S PG+ G PG G G+KGE+G PG+ G G PG G PG PG G PGP G
Sbjct: 380 PGSPGSSRPGLRGAPGWPGLKGSKGERGRPGKDAMGTPGSPGCAGSPGLPGSPGPPGPPG 439
Query: 93 ----QKGDPG 98
+KG PG
Sbjct: 440 DIVFRKGPPG 449
Score = 65.9 bits (159), Expect = 3e-11
Identities = 36/75 (48%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
SPG G PG+ G G G G PG G G +G PGK G PG PGP+G G KG KG+PG
Sbjct: 1359 SPGPPGTPGEPGMQGEPGPPGPPGNLGPCGPRGKPGKDGKPGTPGPAGEKGNKGSKGEPG 1418
Query: 99 KSPDGDSSLAASERK 113
P G L + K
Sbjct: 1419 --PAGSDGLPGLKGK 1431
Score = 65.5 bits (158), Expect = 4e-11
Identities = 34/63 (53%), Positives = 38/63 (60%), Gaps = 5/63 (7%)
Query: 37 ACSSPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGD 96
A SPG G PGK G G G KG ++GL GPPG GPPG PG GSPGP G +GD
Sbjct: 1102 APGSPGSPGLPGKPGPHGDLGFKG-----IKGLLGPPGIRGPPGLPGFPGSPGPMGIRGD 1156
Query: 97 PGK 99
G+
Sbjct: 1157 QGR 1159
Score = 65.1 bits (157), Expect = 5e-11
Identities = 34/71 (47%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 33 PAVIACSSPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKG 92
PAV PG GFPG+ G G GE G PG L GL G PG G G G G PGP G
Sbjct: 744 PAVAMPGGPGTPGFPGERGNSGEHGEIGLPG--LPGLPGTPGNEGLDGPRGDPGQPGPPG 801
Query: 93 QKGDPGKSPDG 103
++G PG+ +G
Sbjct: 802 EQGPPGRCIEG 812
Score = 62.4 bits (150), Expect = 4e-10
Identities = 32/74 (43%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGK 99
PG+ GF G G G +G G PG +GL+GL GP G GP G+ G +G+PG G +G PG
Sbjct: 957 PGLKGFAGNPGEKGNRGVPGMPGLKGLKGLPGPAGPPGPRGDLGSTGNPGEPGLRGIPGS 1016
Query: 100 SPDGDSSLAASERK 113
G+ + S+ K
Sbjct: 1017 M--GNMGMPGSKGK 1028
Score = 62.0 bits (149), Expect = 5e-10
Identities = 44/115 (38%), Positives = 56/115 (48%), Gaps = 23/115 (20%)
Query: 7 LPLLLLSMVAA-SYSETVTCED-------------AQKTCPAVIACSSPGINGFPGKDGR 52
LPLLL+ + AA + S+ C+D +K P SPG GF G +G
Sbjct: 14 LPLLLVLLAAAPAASKGCVCKDKGQCFCDGAKGEKGEKGFPG--PPGSPGQKGFTGPEGL 71
Query: 53 DGTKGEKGEPG-------QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGKS 100
G +G KG PG +G+RG+ G PG G PG PG G+ GP G G PG S
Sbjct: 72 PGPQGPKGFPGLPGLTGSKGVRGISGLPGFSGSPGLPGTPGNTGPYGLVGVPGCS 126
Score = 62.0 bits (149), Expect = 5e-10
Identities = 33/70 (47%), Positives = 36/70 (51%), Gaps = 12/70 (17%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ------------GLRGLQGPPGKLGPPGNPGPSGSP 88
PG G+PG G G KG+KG P + GL G GP G GPPG PGP G P
Sbjct: 138 PGTLGYPGIPGAAGLKGQKGAPAKEEDIELDAKGDPGLPGAPGPQGLPGPPGFPGPVGPP 197
Query: 89 GPKGQKGDPG 98
GP G G PG
Sbjct: 198 GPPGFFGFPG 207
Score = 61.6 bits (148), Expect = 6e-10
Identities = 35/73 (47%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ--GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
PG GFPG G G KGEKGE Q G G+ G PG G PG G G PG G KG PG
Sbjct: 522 PGFPGFPGAQGDPGLKGEKGETLQPEGQVGVPGDPGLRGQPGRKGLDGIPGTPGVKGLPG 581
Query: 99 KSPDGDSSLAASE 111
P G+ +L+ +
Sbjct: 582 --PKGELALSGEK 592
Score = 61.6 bits (148), Expect = 6e-10
Identities = 29/58 (50%), Positives = 34/58 (58%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
PG+NG G+ GR G G KG+PG G PG+ G PG PG G GP GQ+G PG
Sbjct: 820 PGLNGLKGQQGRRGKTGPKGDPGIPGLDRSGFPGETGSPGIPGHQGEMGPLGQRGYPG 877
Score = 61.2 bits (147), Expect = 8e-10
Identities = 33/76 (43%), Positives = 38/76 (50%), Gaps = 20/76 (26%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGP------------------PGNP 82
PG G PG G G KGEKG PG G GPPG +GP PG+P
Sbjct: 1303 PGPRGDPGFQGFPGVKGEKGNPG--FLGSIGPPGPIGPKGPPGVRGDPGTLKIISLPGSP 1360
Query: 83 GPSGSPGPKGQKGDPG 98
GP G+PG G +G+PG
Sbjct: 1361 GPPGTPGEPGMQGEPG 1376
Score = 59.7 bits (143), Expect = 2e-09
Identities = 35/78 (44%), Positives = 41/78 (52%), Gaps = 12/78 (15%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQ-GLRG-------LQGPPGKLGPPGNPGPSGS---PGP 90
G G PG G G G G PG+ G RG + GPPG GPPG+PGP G PG
Sbjct: 619 GPQGEPGLQGTQGVPGAPGPPGEAGPRGELSVSTPVPGPPGPPGPPGHPGPQGPPGIPGS 678
Query: 91 KGQKGDPG-KSPDGDSSL 107
G+ GDPG PDG+ +
Sbjct: 679 LGKCGDPGLPGPDGEPGI 696
Score = 59.3 bits (142), Expect = 3e-09
Identities = 30/66 (45%), Positives = 37/66 (56%), Gaps = 7/66 (10%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPG-------QGLRGLQGPPGKLGPPGNPGPSGSPGPKG 92
SPGI G G+ G G +G G PG G+ G+ G PG +GPPG PG G+PG +G
Sbjct: 857 SPGIPGHQGEMGPLGQRGYPGNPGILGPPGEDGVIGMMGFPGAIGPPGPPGNPGTPGQRG 916
Query: 93 QKGDPG 98
G PG
Sbjct: 917 SPGIPG 922
Score = 59.3 bits (142), Expect = 3e-09
Identities = 29/58 (50%), Positives = 31/58 (53%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
PG G PG G G +G+KGEPG GPPG G PG PG G G GQ G PG
Sbjct: 1035 PGRAGRPGLPGIHGLQGDKGEPGYSEGTRPGPPGPTGDPGLPGDMGKKGEMGQPGPPG 1092
Score = 58.9 bits (141), Expect = 4e-09
Identities = 31/75 (41%), Positives = 37/75 (49%), Gaps = 12/75 (16%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG------------QGLRGLQGPPGKLGPPGNPGPSGSP 88
PG+ G PG +G DG +G+ G+PG +G RG QG PG G G G G
Sbjct: 776 PGLPGTPGNEGLDGPRGDPGQPGPPGEQGPPGRCIEGPRGAQGLPGLNGLKGQQGRRGKT 835
Query: 89 GPKGQKGDPGKSPDG 103
GPKG G PG G
Sbjct: 836 GPKGDPGIPGLDRSG 850
Score = 58.2 bits (139), Expect = 7e-09
Identities = 38/103 (36%), Positives = 48/103 (46%), Gaps = 23/103 (22%)
Query: 37 ACSSPGINGFPGKD------GRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPS---- 85
A PG+ G PGKD G +G KG +G PG G G++G G +GPPG GP+
Sbjct: 289 APGDPGLQGKPGKDGVPGFPGSEGVKGNRGFPGLMGEDGIKGQKGDIGPPGFRGPTEYYD 348
Query: 86 -----------GSPGPKGQKGDPGKS-PDGDSSLAASERKALQ 116
G PGP+G +G G S P G S R L+
Sbjct: 349 TYQEKGDEGTPGPPGPRGARGPQGPSGPPGVPGSPGSSRPGLR 391
Score = 57.8 bits (138), Expect = 9e-09
Identities = 32/72 (44%), Positives = 38/72 (52%), Gaps = 13/72 (18%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG----QGLRGLQGPPGKLGPPGNPGPS---------GS 87
PG G PG G GT G++G PG +G RG G G+ G GNPGPS G
Sbjct: 897 PGAIGPPGPPGNPGTPGQRGSPGIPGVKGQRGTPGAKGEQGDKGNPGPSEISHVIGDKGE 956
Query: 88 PGPKGQKGDPGK 99
PG KG G+PG+
Sbjct: 957 PGLKGFAGNPGE 968
Score = 57.4 bits (137), Expect = 1e-08
Identities = 34/83 (40%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Query: 27 DAQKTCPAVIACSSPGINGFPGKDGRDGTKGEKGEPGQ----GLRGLQGPPGKLGPPGNP 82
D K P ++ P I G PG G G G KG PG+ GL+G G PG G PG P
Sbjct: 466 DGPKGEPGLLCTQCPYIPGPPGLPGLPGLHGVKGIPGRQGAAGLKGSPGSPGNTGLPGFP 525
Query: 83 GPSGSPGPKGQKGDPGKS--PDG 103
G G+ G G KG+ G++ P+G
Sbjct: 526 GFPGAQGDPGLKGEKGETLQPEG 548
Score = 57.0 bits (136), Expect = 1e-08
Identities = 29/59 (49%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
PG G PG G G +G+ G G G++G +G PG LG G PGP G GP G +GDPG
Sbjct: 1291 PGRLGAPGTPGLPGPRGDPGFQGFPGVKGEKGNPGFLGSIGPPGPIGPKGPPGVRGDPG 1349
Score = 56.6 bits (135), Expect = 2e-08
Identities = 32/64 (50%), Positives = 33/64 (51%), Gaps = 10/64 (15%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGKS 100
PG G PG G G KGE G+PG PPG LGP G G GSPG G G PG
Sbjct: 1067 PGPTGDPGLPGDMGKKGEMGQPG--------PPGHLGPAGPEGAPGSPGSPGLPGKPG-- 1116
Query: 101 PDGD 104
P GD
Sbjct: 1117 PHGD 1120
Score = 55.5 bits (132), Expect = 4e-08
Identities = 30/62 (48%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 40 SPGINGFPGKDGRD--GTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGD 96
SPG G PG G G KG+KG G G +G G G +GPPG G G+PG G +GD
Sbjct: 1249 SPGAPGPPGPPGSHVIGIKGDKGSMGHPGPKGPPGTAGDMGPPGRLGAPGTPGLPGPRGD 1308
Query: 97 PG 98
PG
Sbjct: 1309 PG 1310
Score = 55.1 bits (131), Expect = 6e-08
Identities = 34/83 (40%), Positives = 36/83 (43%), Gaps = 14/83 (16%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQG------LRGLQGPPGKLGPPGNPGPSGS-------P 88
G G PG G G G G PG G L+G QG PG GPPG GP G P
Sbjct: 596 GPPGDPGSPGSPGPAGPAGPPGYGPQGEPGLQGTQGVPGAPGPPGEAGPRGELSVSTPVP 655
Query: 89 GPKGQKGDPG-KSPDGDSSLAAS 110
GP G G PG P G + S
Sbjct: 656 GPPGPPGPPGHPGPQGPPGIPGS 678
Score = 54.7 bits (130), Expect = 7e-08
Identities = 32/79 (40%), Positives = 42/79 (53%), Gaps = 10/79 (12%)
Query: 40 SPGINGFPGKDGR---DGTKGEKGEPGQ-GLRGLQGPPGKLGPPG-----NPGPSGSPGP 90
+PG+ G PG G G KG++G PG G G GP G GPPG PG G+ G
Sbjct: 573 TPGVKGLPGPKGELALSGEKGDQGPPGDPGSPGSPGPAGPAGPPGYGPQGEPGLQGTQGV 632
Query: 91 KGQKGDPGKS-PDGDSSLA 108
G G PG++ P G+ S++
Sbjct: 633 PGAPGPPGEAGPRGELSVS 651
Score = 54.7 bits (130), Expect = 7e-08
Identities = 29/58 (50%), Positives = 31/58 (53%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
PGI G GK G G G GEPG G GPPG G G PG GS G G+ G+PG
Sbjct: 673 PGIPGSLGKCGDPGLPGPDGEPGIPGIGFPGPPGPKGDQGFPGTKGSLGCPGKMGEPG 730
Score = 52.8 bits (125), Expect = 3e-07
Identities = 33/88 (37%), Positives = 37/88 (42%), Gaps = 24/88 (27%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPG---------------QGLRGLQGPPGKLGPPGNPGP 84
+PG G PG+ G G G +G G G G +GPPG G PG PGP
Sbjct: 1196 APGFPGLPGRKGAMGDAGPRGPTGIEGFPGPPGLPGAIIPGQTGNRGPPGSRGSPGAPGP 1255
Query: 85 SGSP--------GPKGQKGDPG-KSPDG 103
G P G KG G PG K P G
Sbjct: 1256 PGPPGSHVIGIKGDKGSMGHPGPKGPPG 1283
Score = 52.4 bits (124), Expect = 4e-07
Identities = 33/92 (35%), Positives = 37/92 (40%), Gaps = 25/92 (27%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPG-----------------KLGPPGNPG 83
PG G G G G G G PG GL+G PG +G PG+PG
Sbjct: 362 PGPRGARGPQGPSGPPGVPGSPGSSRPGLRGAPGWPGLKGSKGERGRPGKDAMGTPGSPG 421
Query: 84 PSGSPGPKGQKGDPG--------KSPDGDSSL 107
+GSPG G G PG K P GD L
Sbjct: 422 CAGSPGLPGSPGPPGPPGDIVFRKGPPGDHGL 453
Score = 52.4 bits (124), Expect = 4e-07
Identities = 34/82 (41%), Positives = 40/82 (48%), Gaps = 17/82 (20%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPG-------------QGLRGLQGPPGKLGPPGNPGPSG 86
SPGI G G+ G G KGE+G+ G +G GL+G G G GN G G
Sbjct: 917 SPGIPGVKGQRGTPGAKGEQGDKGNPGPSEISHVIGDKGEPGLKGFAGNPGEKGNRGVPG 976
Query: 87 SPGPKGQKGDPGKS----PDGD 104
PG KG KG PG + P GD
Sbjct: 977 MPGLKGLKGLPGPAGPPGPRGD 998
Score = 52.4 bits (124), Expect = 4e-07
Identities = 26/67 (38%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 33 PAVIACSSPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKG 92
P I G G PG G G G G PG + G++G G +G +PGP G PG G
Sbjct: 1230 PGAIIPGQTGNRGPPGSRGSPGAPGPPGPPGSHVIGIKGDKGSMG---HPGPKGPPGTAG 1286
Query: 93 QKGDPGK 99
G PG+
Sbjct: 1287 DMGPPGR 1293
Score = 52.0 bits (123), Expect = 5e-07
Identities = 33/79 (41%), Positives = 36/79 (45%), Gaps = 12/79 (15%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNP--------GPSGSPGPKG 92
PG GFPG G G KG GE G +G +G G GPPG P GP KG
Sbjct: 200 PGFFGFPGAMGPRGPKGHMGERVIGHKGERGVKGLTGPPGPPGTVIVTLTGPDNRTDLKG 259
Query: 93 QKGDPG----KSPDGDSSL 107
+KGD G P G S L
Sbjct: 260 EKGDKGAMGEPGPPGPSGL 278
Score = 52.0 bits (123), Expect = 5e-07
Identities = 33/66 (50%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGS---PGPKGQKGD 96
PG G G GR G G G PG +G G QG PG G GNPG GS PGP G KG
Sbjct: 1282 PGTAGDMGPPGRLGAPGTPGLPGPRGDPGFQGFPGVKGEKGNPGFLGSIGPPGPIGPKGP 1341
Query: 97 PGKSPD 102
PG D
Sbjct: 1342 PGVRGD 1347
Score = 51.2 bits (121), Expect = 8e-07
Identities = 32/80 (40%), Positives = 40/80 (50%), Gaps = 16/80 (20%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG------------QGLRGLQGPPGKLGPPGNPGPSGSP 88
PG G PG G+ G G KGEP G RG G G++G PG PG G+P
Sbjct: 723 PGKMGEPGLPGKPGLPGAKGEPAVAMPGGPGTPGFPGERGNSGEHGEIGLPGLPGLPGTP 782
Query: 89 GPK---GQKGDPGK-SPDGD 104
G + G +GDPG+ P G+
Sbjct: 783 GNEGLDGPRGDPGQPGPPGE 802
Score = 50.8 bits (120), Expect = 1e-06
Identities = 30/68 (44%), Positives = 34/68 (50%), Gaps = 10/68 (14%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQ----GLRGLQGPPGK------LGPPGNPGPSGSPGPK 91
G G PG G G G +G+PG L G GPPG G PG PGP G+ GP
Sbjct: 1328 GSIGPPGPIGPKGPPGVRGDPGTLKIISLPGSPGPPGTPGEPGMQGEPGPPGPPGNLGPC 1387
Query: 92 GQKGDPGK 99
G +G PGK
Sbjct: 1388 GPRGKPGK 1395
Score = 50.1 bits (118), Expect = 2e-06
Identities = 30/62 (48%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ----GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGD 96
PG G PG G G +G G PG G GL GP G+ G PG P G PGPKG +G
Sbjct: 655 PGPPGPPGPPGHPGPQGPPGIPGSLGKCGDPGLPGPDGEPGIPGIGFP-GPPGPKGDQGF 713
Query: 97 PG 98
PG
Sbjct: 714 PG 715
Score = 50.1 bits (118), Expect = 2e-06
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQ----GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDP 97
G+ G PG G G +G+ G G GLRG+ G G +G PG+ G G+ G G+ G P
Sbjct: 982 GLKGLPGPAGPPGPRGDLGSTGNPGEPGLRGIPGSMGNMGMPGSKGKRGTLGFPGRAGRP 1041
Query: 98 G 98
G
Sbjct: 1042 G 1042
Score = 49.7 bits (117), Expect = 2e-06
Identities = 34/82 (41%), Positives = 36/82 (43%), Gaps = 25/82 (30%)
Query: 42 GINGFPGKDGRDGTKGE----------KGEPGQ-GLRGLQGPPG------KLGPPGNPGP 84
G+ G PG G G +GE G PG G G QGPPG K G PG PGP
Sbjct: 631 GVPGAPGPPGEAGPRGELSVSTPVPGPPGPPGPPGHPGPQGPPGIPGSLGKCGDPGLPGP 690
Query: 85 SGS--------PGPKGQKGDPG 98
G PGP G KGD G
Sbjct: 691 DGEPGIPGIGFPGPPGPKGDQG 712
Score = 49.7 bits (117), Expect = 2e-06
Identities = 29/61 (47%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
SPG G G GRDG G GE G+ GL L+ PPG G PG G G G G G PG
Sbjct: 1147 SPGPMGIRGDQGRDGIPGPAGEKGETGL--LRAPPGPRGNPGAQGAKGDRGAPGFPGLPG 1204
Query: 99 K 99
+
Sbjct: 1205 R 1205
Score = 49.7 bits (117), Expect = 2e-06
Identities = 29/71 (40%), Positives = 33/71 (46%), Gaps = 14/71 (19%)
Query: 42 GINGFPGKDGRDGTKGEKGEPG--------------QGLRGLQGPPGKLGPPGNPGPSGS 87
GI G G+DG G GEKGE G QG +G +G PG G PG G G
Sbjct: 1152 GIRGDQGRDGIPGPAGEKGETGLLRAPPGPRGNPGAQGAKGDRGAPGFPGLPGRKGAMGD 1211
Query: 88 PGPKGQKGDPG 98
GP+G G G
Sbjct: 1212 AGPRGPTGIEG 1222
Score = 49.3 bits (116), Expect = 3e-06
Identities = 31/75 (41%), Positives = 36/75 (48%), Gaps = 17/75 (22%)
Query: 38 CSSPGINGFPGKDGR--------DGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSP 88
C PG+ PG DG G G KG+ G G +G G PGK+G PG PG G P
Sbjct: 682 CGDPGL---PGPDGEPGIPGIGFPGPPGPKGDQGFPGTKGSLGCPGKMGEPGLPGKPGLP 738
Query: 89 GPKGQ-----KGDPG 98
G KG+ G PG
Sbjct: 739 GAKGEPAVAMPGGPG 753
Score = 49.3 bits (116), Expect = 3e-06
Identities = 30/76 (39%), Positives = 33/76 (43%), Gaps = 19/76 (25%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSG-------------- 86
PG+ G PG G G G KG+ RG G PG+ G PG PG G
Sbjct: 1008 PGLRGIPGSMGNMGMPGSKGK-----RGTLGFPGRAGRPGLPGIHGLQGDKGEPGYSEGT 1062
Query: 87 SPGPKGQKGDPGKSPD 102
PGP G GDPG D
Sbjct: 1063 RPGPPGPTGDPGLPGD 1078
Score = 48.9 bits (115), Expect = 4e-06
Identities = 30/76 (39%), Positives = 35/76 (46%), Gaps = 9/76 (11%)
Query: 33 PAVIACSSPGINGFPGKDGRDGTKGEKGEPGQ----GLRGLQGPPGKLGP-----PGNPG 83
P + PG G G G GTKG G PG+ GL G G PG G PG PG
Sbjct: 694 PGIPGIGFPGPPGPKGDQGFPGTKGSLGCPGKMGEPGLPGKPGLPGAKGEPAVAMPGGPG 753
Query: 84 PSGSPGPKGQKGDPGK 99
G PG +G G+ G+
Sbjct: 754 TPGFPGERGNSGEHGE 769
Score = 48.5 bits (114), Expect = 5e-06
Identities = 29/60 (48%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGK 99
S G G PG G D GE G PG G G GP G G PG G G PG G+ G PGK
Sbjct: 678 SLGKCGDPGLPGPD---GEPGIPGIGFPGPPGPKGDQGFPGTKGSLGCPGKMGEPGLPGK 734
Score = 47.8 bits (112), Expect = 9e-06
Identities = 34/93 (36%), Positives = 42/93 (45%), Gaps = 19/93 (20%)
Query: 26 EDAQKTCPAVIACSSPGINGFPGKDG-------RDGTKGEKGEPG----QGLRGLQGPPG 74
+DA T + SPG+ G PG G R G G+ G PG G+ G+ GP G
Sbjct: 411 KDAMGTPGSPGCAGSPGLPGSPGPPGPPGDIVFRKGPPGDHGLPGYLGSPGIPGVDGPKG 470
Query: 75 KLG--------PPGNPGPSGSPGPKGQKGDPGK 99
+ G PG PG G PG G KG PG+
Sbjct: 471 EPGLLCTQCPYIPGPPGLPGLPGLHGVKGIPGR 503
Score = 47.8 bits (112), Expect = 9e-06
Identities = 29/66 (43%), Positives = 33/66 (50%), Gaps = 9/66 (13%)
Query: 42 GINGFPGKDGRDGTKGEKGEPG----QGLRGLQGPP-----GKLGPPGNPGPSGSPGPKG 92
G GFPG G G G+ GEPG GL G +G P G G PG PG G+ G G
Sbjct: 709 GDQGFPGTKGSLGCPGKMGEPGLPGKPGLPGAKGEPAVAMPGGPGTPGFPGERGNSGEHG 768
Query: 93 QKGDPG 98
+ G PG
Sbjct: 769 EIGLPG 774
Score = 47.4 bits (111), Expect = 1e-05
Identities = 31/62 (50%), Positives = 32/62 (51%), Gaps = 10/62 (16%)
Query: 42 GINGFPGKDGRDGTKGE-----KGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGD 96
G G PG G G GE KG PG GLQG PGK G PG PG S G KG +G
Sbjct: 265 GAMGEPGPPGPSGLPGESYGSEKGAPGDP--GLQGKPGKDGVPGFPG---SEGVKGNRGF 319
Query: 97 PG 98
PG
Sbjct: 320 PG 321
Score = 47.0 bits (110), Expect = 2e-05
Identities = 28/64 (43%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 41 PGINGFPGKD-----GRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGPSGSPGPKGQK 94
PG +G PG+ G G G +G+PG+ G+ G G G G G PG G G KGQK
Sbjct: 273 PGPSGLPGESYGSEKGAPGDPGLQGKPGKDGVPGFPGSEGVKGNRGFPGLMGEDGIKGQK 332
Query: 95 GDPG 98
GD G
Sbjct: 333 GDIG 336
Score = 47.0 bits (110), Expect = 2e-05
Identities = 26/57 (45%), Positives = 32/57 (56%), Gaps = 8/57 (14%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
G G PGKDG+ GT G GE G +G G+ GP G+ G PG KG++GD G
Sbjct: 1388 GPRGKPGKDGKPGTPGPAGEKGN-----KGSKGEPGPAGS---DGLPGLKGKRGDSG 1436
Score = 43.5 bits (101), Expect = 2e-04
Identities = 24/60 (40%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQGL---RGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
G G G G G G G PG+ +G G PG G PG G G PG +G KG+ G
Sbjct: 259 GEKGDKGAMGEPGPPGPSGLPGESYGSEKGAPGDPGLQGKPGKDGVPGFPGSEGVKGNRG 318
Score = 42.7 bits (99), Expect = 3e-04
Identities = 28/69 (40%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
Query: 29 QKTCPAV---IACSSPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPS 85
QK PA I + G G PG G G G G PG G GPPG G PG GP
Sbjct: 155 QKGAPAKEEDIELDAKGDPGLPGAPGPQGLPGPPGFPGPV--GPPGPPGFFGFPGAMGPR 212
Query: 86 GSPGPKGQK 94
G G G++
Sbjct: 213 GPKGHMGER 221
>gi|89142730 alpha 3 type IV collagen isoform 1 precursor [Homo
sapiens]
Length = 1670
Score = 70.5 bits (171), Expect = 1e-12
Identities = 36/75 (48%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 41 PGINGFPGKDGRDG---TKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGD 96
PG+ G PG+ G DG T G KG PG +G L G G GPPG+PG GSPGP G G
Sbjct: 556 PGLRGQPGRKGLDGIPGTPGVKGLPGPKGELALSGEKGDQGPPGDPGSPGSPGPAGPAGP 615
Query: 97 PGKSPDGDSSLAASE 111
PG P G+ L ++
Sbjct: 616 PGYGPQGEPGLQGTQ 630
Score = 66.2 bits (160), Expect = 2e-11
Identities = 33/70 (47%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 33 PAVIACSSPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKG 92
P S PG+ G PG G G+KGE+G PG+ G G PG G PG PG G PGP G
Sbjct: 380 PGSPGSSRPGLRGAPGWPGLKGSKGERGRPGKDAMGTPGSPGCAGSPGLPGSPGPPGPPG 439
Query: 93 ----QKGDPG 98
+KG PG
Sbjct: 440 DIVFRKGPPG 449
Score = 65.9 bits (159), Expect = 3e-11
Identities = 36/75 (48%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
SPG G PG+ G G G G PG G G +G PGK G PG PGP+G G KG KG+PG
Sbjct: 1359 SPGPPGTPGEPGMQGEPGPPGPPGNLGPCGPRGKPGKDGKPGTPGPAGEKGNKGSKGEPG 1418
Query: 99 KSPDGDSSLAASERK 113
P G L + K
Sbjct: 1419 --PAGSDGLPGLKGK 1431
Score = 65.5 bits (158), Expect = 4e-11
Identities = 34/63 (53%), Positives = 38/63 (60%), Gaps = 5/63 (7%)
Query: 37 ACSSPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGD 96
A SPG G PGK G G G KG ++GL GPPG GPPG PG GSPGP G +GD
Sbjct: 1102 APGSPGSPGLPGKPGPHGDLGFKG-----IKGLLGPPGIRGPPGLPGFPGSPGPMGIRGD 1156
Query: 97 PGK 99
G+
Sbjct: 1157 QGR 1159
Score = 65.1 bits (157), Expect = 5e-11
Identities = 34/71 (47%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 33 PAVIACSSPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKG 92
PAV PG GFPG+ G G GE G PG L GL G PG G G G G PGP G
Sbjct: 744 PAVAMPGGPGTPGFPGERGNSGEHGEIGLPG--LPGLPGTPGNEGLDGPRGDPGQPGPPG 801
Query: 93 QKGDPGKSPDG 103
++G PG+ +G
Sbjct: 802 EQGPPGRCIEG 812
Score = 62.4 bits (150), Expect = 4e-10
Identities = 32/74 (43%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGK 99
PG+ GF G G G +G G PG +GL+GL GP G GP G+ G +G+PG G +G PG
Sbjct: 957 PGLKGFAGNPGEKGNRGVPGMPGLKGLKGLPGPAGPPGPRGDLGSTGNPGEPGLRGIPGS 1016
Query: 100 SPDGDSSLAASERK 113
G+ + S+ K
Sbjct: 1017 M--GNMGMPGSKGK 1028
Score = 62.0 bits (149), Expect = 5e-10
Identities = 44/115 (38%), Positives = 56/115 (48%), Gaps = 23/115 (20%)
Query: 7 LPLLLLSMVAA-SYSETVTCED-------------AQKTCPAVIACSSPGINGFPGKDGR 52
LPLLL+ + AA + S+ C+D +K P SPG GF G +G
Sbjct: 14 LPLLLVLLAAAPAASKGCVCKDKGQCFCDGAKGEKGEKGFPG--PPGSPGQKGFTGPEGL 71
Query: 53 DGTKGEKGEPG-------QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGKS 100
G +G KG PG +G+RG+ G PG G PG PG G+ GP G G PG S
Sbjct: 72 PGPQGPKGFPGLPGLTGSKGVRGISGLPGFSGSPGLPGTPGNTGPYGLVGVPGCS 126
Score = 62.0 bits (149), Expect = 5e-10
Identities = 33/70 (47%), Positives = 36/70 (51%), Gaps = 12/70 (17%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ------------GLRGLQGPPGKLGPPGNPGPSGSP 88
PG G+PG G G KG+KG P + GL G GP G GPPG PGP G P
Sbjct: 138 PGTLGYPGIPGAAGLKGQKGAPAKEEDIELDAKGDPGLPGAPGPQGLPGPPGFPGPVGPP 197
Query: 89 GPKGQKGDPG 98
GP G G PG
Sbjct: 198 GPPGFFGFPG 207
Score = 61.6 bits (148), Expect = 6e-10
Identities = 35/73 (47%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ--GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
PG GFPG G G KGEKGE Q G G+ G PG G PG G G PG G KG PG
Sbjct: 522 PGFPGFPGAQGDPGLKGEKGETLQPEGQVGVPGDPGLRGQPGRKGLDGIPGTPGVKGLPG 581
Query: 99 KSPDGDSSLAASE 111
P G+ +L+ +
Sbjct: 582 --PKGELALSGEK 592
Score = 61.6 bits (148), Expect = 6e-10
Identities = 29/58 (50%), Positives = 34/58 (58%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
PG+NG G+ GR G G KG+PG G PG+ G PG PG G GP GQ+G PG
Sbjct: 820 PGLNGLKGQQGRRGKTGPKGDPGIPGLDRSGFPGETGSPGIPGHQGEMGPLGQRGYPG 877
Score = 61.2 bits (147), Expect = 8e-10
Identities = 33/76 (43%), Positives = 38/76 (50%), Gaps = 20/76 (26%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGP------------------PGNP 82
PG G PG G G KGEKG PG G GPPG +GP PG+P
Sbjct: 1303 PGPRGDPGFQGFPGVKGEKGNPG--FLGSIGPPGPIGPKGPPGVRGDPGTLKIISLPGSP 1360
Query: 83 GPSGSPGPKGQKGDPG 98
GP G+PG G +G+PG
Sbjct: 1361 GPPGTPGEPGMQGEPG 1376
Score = 59.7 bits (143), Expect = 2e-09
Identities = 35/78 (44%), Positives = 41/78 (52%), Gaps = 12/78 (15%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQ-GLRG-------LQGPPGKLGPPGNPGPSGS---PGP 90
G G PG G G G G PG+ G RG + GPPG GPPG+PGP G PG
Sbjct: 619 GPQGEPGLQGTQGVPGAPGPPGEAGPRGELSVSTPVPGPPGPPGPPGHPGPQGPPGIPGS 678
Query: 91 KGQKGDPG-KSPDGDSSL 107
G+ GDPG PDG+ +
Sbjct: 679 LGKCGDPGLPGPDGEPGI 696
Score = 59.3 bits (142), Expect = 3e-09
Identities = 30/66 (45%), Positives = 37/66 (56%), Gaps = 7/66 (10%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPG-------QGLRGLQGPPGKLGPPGNPGPSGSPGPKG 92
SPGI G G+ G G +G G PG G+ G+ G PG +GPPG PG G+PG +G
Sbjct: 857 SPGIPGHQGEMGPLGQRGYPGNPGILGPPGEDGVIGMMGFPGAIGPPGPPGNPGTPGQRG 916
Query: 93 QKGDPG 98
G PG
Sbjct: 917 SPGIPG 922
Score = 59.3 bits (142), Expect = 3e-09
Identities = 29/58 (50%), Positives = 31/58 (53%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
PG G PG G G +G+KGEPG GPPG G PG PG G G GQ G PG
Sbjct: 1035 PGRAGRPGLPGIHGLQGDKGEPGYSEGTRPGPPGPTGDPGLPGDMGKKGEMGQPGPPG 1092
Score = 58.9 bits (141), Expect = 4e-09
Identities = 31/75 (41%), Positives = 37/75 (49%), Gaps = 12/75 (16%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG------------QGLRGLQGPPGKLGPPGNPGPSGSP 88
PG+ G PG +G DG +G+ G+PG +G RG QG PG G G G G
Sbjct: 776 PGLPGTPGNEGLDGPRGDPGQPGPPGEQGPPGRCIEGPRGAQGLPGLNGLKGQQGRRGKT 835
Query: 89 GPKGQKGDPGKSPDG 103
GPKG G PG G
Sbjct: 836 GPKGDPGIPGLDRSG 850
Score = 58.2 bits (139), Expect = 7e-09
Identities = 38/103 (36%), Positives = 48/103 (46%), Gaps = 23/103 (22%)
Query: 37 ACSSPGINGFPGKD------GRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPS---- 85
A PG+ G PGKD G +G KG +G PG G G++G G +GPPG GP+
Sbjct: 289 APGDPGLQGKPGKDGVPGFPGSEGVKGNRGFPGLMGEDGIKGQKGDIGPPGFRGPTEYYD 348
Query: 86 -----------GSPGPKGQKGDPGKS-PDGDSSLAASERKALQ 116
G PGP+G +G G S P G S R L+
Sbjct: 349 TYQEKGDEGTPGPPGPRGARGPQGPSGPPGVPGSPGSSRPGLR 391
Score = 57.8 bits (138), Expect = 9e-09
Identities = 32/72 (44%), Positives = 38/72 (52%), Gaps = 13/72 (18%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG----QGLRGLQGPPGKLGPPGNPGPS---------GS 87
PG G PG G GT G++G PG +G RG G G+ G GNPGPS G
Sbjct: 897 PGAIGPPGPPGNPGTPGQRGSPGIPGVKGQRGTPGAKGEQGDKGNPGPSEISHVIGDKGE 956
Query: 88 PGPKGQKGDPGK 99
PG KG G+PG+
Sbjct: 957 PGLKGFAGNPGE 968
Score = 57.4 bits (137), Expect = 1e-08
Identities = 34/83 (40%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Query: 27 DAQKTCPAVIACSSPGINGFPGKDGRDGTKGEKGEPGQ----GLRGLQGPPGKLGPPGNP 82
D K P ++ P I G PG G G G KG PG+ GL+G G PG G PG P
Sbjct: 466 DGPKGEPGLLCTQCPYIPGPPGLPGLPGLHGVKGIPGRQGAAGLKGSPGSPGNTGLPGFP 525
Query: 83 GPSGSPGPKGQKGDPGKS--PDG 103
G G+ G G KG+ G++ P+G
Sbjct: 526 GFPGAQGDPGLKGEKGETLQPEG 548
Score = 57.0 bits (136), Expect = 1e-08
Identities = 29/59 (49%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
PG G PG G G +G+ G G G++G +G PG LG G PGP G GP G +GDPG
Sbjct: 1291 PGRLGAPGTPGLPGPRGDPGFQGFPGVKGEKGNPGFLGSIGPPGPIGPKGPPGVRGDPG 1349
Score = 56.6 bits (135), Expect = 2e-08
Identities = 32/64 (50%), Positives = 33/64 (51%), Gaps = 10/64 (15%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGKS 100
PG G PG G G KGE G+PG PPG LGP G G GSPG G G PG
Sbjct: 1067 PGPTGDPGLPGDMGKKGEMGQPG--------PPGHLGPAGPEGAPGSPGSPGLPGKPG-- 1116
Query: 101 PDGD 104
P GD
Sbjct: 1117 PHGD 1120
Score = 55.5 bits (132), Expect = 4e-08
Identities = 30/62 (48%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 40 SPGINGFPGKDGRD--GTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGD 96
SPG G PG G G KG+KG G G +G G G +GPPG G G+PG G +GD
Sbjct: 1249 SPGAPGPPGPPGSHVIGIKGDKGSMGHPGPKGPPGTAGDMGPPGRLGAPGTPGLPGPRGD 1308
Query: 97 PG 98
PG
Sbjct: 1309 PG 1310
Score = 55.1 bits (131), Expect = 6e-08
Identities = 34/83 (40%), Positives = 36/83 (43%), Gaps = 14/83 (16%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQG------LRGLQGPPGKLGPPGNPGPSGS-------P 88
G G PG G G G G PG G L+G QG PG GPPG GP G P
Sbjct: 596 GPPGDPGSPGSPGPAGPAGPPGYGPQGEPGLQGTQGVPGAPGPPGEAGPRGELSVSTPVP 655
Query: 89 GPKGQKGDPG-KSPDGDSSLAAS 110
GP G G PG P G + S
Sbjct: 656 GPPGPPGPPGHPGPQGPPGIPGS 678
Score = 54.7 bits (130), Expect = 7e-08
Identities = 32/79 (40%), Positives = 42/79 (53%), Gaps = 10/79 (12%)
Query: 40 SPGINGFPGKDGR---DGTKGEKGEPGQ-GLRGLQGPPGKLGPPG-----NPGPSGSPGP 90
+PG+ G PG G G KG++G PG G G GP G GPPG PG G+ G
Sbjct: 573 TPGVKGLPGPKGELALSGEKGDQGPPGDPGSPGSPGPAGPAGPPGYGPQGEPGLQGTQGV 632
Query: 91 KGQKGDPGKS-PDGDSSLA 108
G G PG++ P G+ S++
Sbjct: 633 PGAPGPPGEAGPRGELSVS 651
Score = 54.7 bits (130), Expect = 7e-08
Identities = 29/58 (50%), Positives = 31/58 (53%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
PGI G GK G G G GEPG G GPPG G G PG GS G G+ G+PG
Sbjct: 673 PGIPGSLGKCGDPGLPGPDGEPGIPGIGFPGPPGPKGDQGFPGTKGSLGCPGKMGEPG 730
Score = 52.8 bits (125), Expect = 3e-07
Identities = 33/88 (37%), Positives = 37/88 (42%), Gaps = 24/88 (27%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPG---------------QGLRGLQGPPGKLGPPGNPGP 84
+PG G PG+ G G G +G G G G +GPPG G PG PGP
Sbjct: 1196 APGFPGLPGRKGAMGDAGPRGPTGIEGFPGPPGLPGAIIPGQTGNRGPPGSRGSPGAPGP 1255
Query: 85 SGSP--------GPKGQKGDPG-KSPDG 103
G P G KG G PG K P G
Sbjct: 1256 PGPPGSHVIGIKGDKGSMGHPGPKGPPG 1283
Score = 52.4 bits (124), Expect = 4e-07
Identities = 33/92 (35%), Positives = 37/92 (40%), Gaps = 25/92 (27%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPG-----------------KLGPPGNPG 83
PG G G G G G G PG GL+G PG +G PG+PG
Sbjct: 362 PGPRGARGPQGPSGPPGVPGSPGSSRPGLRGAPGWPGLKGSKGERGRPGKDAMGTPGSPG 421
Query: 84 PSGSPGPKGQKGDPG--------KSPDGDSSL 107
+GSPG G G PG K P GD L
Sbjct: 422 CAGSPGLPGSPGPPGPPGDIVFRKGPPGDHGL 453
Score = 52.4 bits (124), Expect = 4e-07
Identities = 34/82 (41%), Positives = 40/82 (48%), Gaps = 17/82 (20%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPG-------------QGLRGLQGPPGKLGPPGNPGPSG 86
SPGI G G+ G G KGE+G+ G +G GL+G G G GN G G
Sbjct: 917 SPGIPGVKGQRGTPGAKGEQGDKGNPGPSEISHVIGDKGEPGLKGFAGNPGEKGNRGVPG 976
Query: 87 SPGPKGQKGDPGKS----PDGD 104
PG KG KG PG + P GD
Sbjct: 977 MPGLKGLKGLPGPAGPPGPRGD 998
Score = 52.4 bits (124), Expect = 4e-07
Identities = 26/67 (38%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 33 PAVIACSSPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKG 92
P I G G PG G G G G PG + G++G G +G +PGP G PG G
Sbjct: 1230 PGAIIPGQTGNRGPPGSRGSPGAPGPPGPPGSHVIGIKGDKGSMG---HPGPKGPPGTAG 1286
Query: 93 QKGDPGK 99
G PG+
Sbjct: 1287 DMGPPGR 1293
Score = 52.0 bits (123), Expect = 5e-07
Identities = 33/79 (41%), Positives = 36/79 (45%), Gaps = 12/79 (15%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNP--------GPSGSPGPKG 92
PG GFPG G G KG GE G +G +G G GPPG P GP KG
Sbjct: 200 PGFFGFPGAMGPRGPKGHMGERVIGHKGERGVKGLTGPPGPPGTVIVTLTGPDNRTDLKG 259
Query: 93 QKGDPG----KSPDGDSSL 107
+KGD G P G S L
Sbjct: 260 EKGDKGAMGEPGPPGPSGL 278
Score = 52.0 bits (123), Expect = 5e-07
Identities = 33/66 (50%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGS---PGPKGQKGD 96
PG G G GR G G G PG +G G QG PG G GNPG GS PGP G KG
Sbjct: 1282 PGTAGDMGPPGRLGAPGTPGLPGPRGDPGFQGFPGVKGEKGNPGFLGSIGPPGPIGPKGP 1341
Query: 97 PGKSPD 102
PG D
Sbjct: 1342 PGVRGD 1347
Score = 51.2 bits (121), Expect = 8e-07
Identities = 32/80 (40%), Positives = 40/80 (50%), Gaps = 16/80 (20%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG------------QGLRGLQGPPGKLGPPGNPGPSGSP 88
PG G PG G+ G G KGEP G RG G G++G PG PG G+P
Sbjct: 723 PGKMGEPGLPGKPGLPGAKGEPAVAMPGGPGTPGFPGERGNSGEHGEIGLPGLPGLPGTP 782
Query: 89 GPK---GQKGDPGK-SPDGD 104
G + G +GDPG+ P G+
Sbjct: 783 GNEGLDGPRGDPGQPGPPGE 802
Score = 50.8 bits (120), Expect = 1e-06
Identities = 30/68 (44%), Positives = 34/68 (50%), Gaps = 10/68 (14%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQ----GLRGLQGPPGK------LGPPGNPGPSGSPGPK 91
G G PG G G G +G+PG L G GPPG G PG PGP G+ GP
Sbjct: 1328 GSIGPPGPIGPKGPPGVRGDPGTLKIISLPGSPGPPGTPGEPGMQGEPGPPGPPGNLGPC 1387
Query: 92 GQKGDPGK 99
G +G PGK
Sbjct: 1388 GPRGKPGK 1395
Score = 50.1 bits (118), Expect = 2e-06
Identities = 30/62 (48%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ----GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGD 96
PG G PG G G +G G PG G GL GP G+ G PG P G PGPKG +G
Sbjct: 655 PGPPGPPGPPGHPGPQGPPGIPGSLGKCGDPGLPGPDGEPGIPGIGFP-GPPGPKGDQGF 713
Query: 97 PG 98
PG
Sbjct: 714 PG 715
Score = 50.1 bits (118), Expect = 2e-06
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQ----GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDP 97
G+ G PG G G +G+ G G GLRG+ G G +G PG+ G G+ G G+ G P
Sbjct: 982 GLKGLPGPAGPPGPRGDLGSTGNPGEPGLRGIPGSMGNMGMPGSKGKRGTLGFPGRAGRP 1041
Query: 98 G 98
G
Sbjct: 1042 G 1042
Score = 49.7 bits (117), Expect = 2e-06
Identities = 34/82 (41%), Positives = 36/82 (43%), Gaps = 25/82 (30%)
Query: 42 GINGFPGKDGRDGTKGE----------KGEPGQ-GLRGLQGPPG------KLGPPGNPGP 84
G+ G PG G G +GE G PG G G QGPPG K G PG PGP
Sbjct: 631 GVPGAPGPPGEAGPRGELSVSTPVPGPPGPPGPPGHPGPQGPPGIPGSLGKCGDPGLPGP 690
Query: 85 SGS--------PGPKGQKGDPG 98
G PGP G KGD G
Sbjct: 691 DGEPGIPGIGFPGPPGPKGDQG 712
Score = 49.7 bits (117), Expect = 2e-06
Identities = 29/61 (47%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
SPG G G GRDG G GE G+ GL L+ PPG G PG G G G G G PG
Sbjct: 1147 SPGPMGIRGDQGRDGIPGPAGEKGETGL--LRAPPGPRGNPGAQGAKGDRGAPGFPGLPG 1204
Query: 99 K 99
+
Sbjct: 1205 R 1205
Score = 49.7 bits (117), Expect = 2e-06
Identities = 29/71 (40%), Positives = 33/71 (46%), Gaps = 14/71 (19%)
Query: 42 GINGFPGKDGRDGTKGEKGEPG--------------QGLRGLQGPPGKLGPPGNPGPSGS 87
GI G G+DG G GEKGE G QG +G +G PG G PG G G
Sbjct: 1152 GIRGDQGRDGIPGPAGEKGETGLLRAPPGPRGNPGAQGAKGDRGAPGFPGLPGRKGAMGD 1211
Query: 88 PGPKGQKGDPG 98
GP+G G G
Sbjct: 1212 AGPRGPTGIEG 1222
Score = 49.3 bits (116), Expect = 3e-06
Identities = 31/75 (41%), Positives = 36/75 (48%), Gaps = 17/75 (22%)
Query: 38 CSSPGINGFPGKDGR--------DGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSP 88
C PG+ PG DG G G KG+ G G +G G PGK+G PG PG G P
Sbjct: 682 CGDPGL---PGPDGEPGIPGIGFPGPPGPKGDQGFPGTKGSLGCPGKMGEPGLPGKPGLP 738
Query: 89 GPKGQ-----KGDPG 98
G KG+ G PG
Sbjct: 739 GAKGEPAVAMPGGPG 753
Score = 49.3 bits (116), Expect = 3e-06
Identities = 30/76 (39%), Positives = 33/76 (43%), Gaps = 19/76 (25%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSG-------------- 86
PG+ G PG G G G KG+ RG G PG+ G PG PG G
Sbjct: 1008 PGLRGIPGSMGNMGMPGSKGK-----RGTLGFPGRAGRPGLPGIHGLQGDKGEPGYSEGT 1062
Query: 87 SPGPKGQKGDPGKSPD 102
PGP G GDPG D
Sbjct: 1063 RPGPPGPTGDPGLPGD 1078
Score = 48.9 bits (115), Expect = 4e-06
Identities = 30/76 (39%), Positives = 35/76 (46%), Gaps = 9/76 (11%)
Query: 33 PAVIACSSPGINGFPGKDGRDGTKGEKGEPGQ----GLRGLQGPPGKLGP-----PGNPG 83
P + PG G G G GTKG G PG+ GL G G PG G PG PG
Sbjct: 694 PGIPGIGFPGPPGPKGDQGFPGTKGSLGCPGKMGEPGLPGKPGLPGAKGEPAVAMPGGPG 753
Query: 84 PSGSPGPKGQKGDPGK 99
G PG +G G+ G+
Sbjct: 754 TPGFPGERGNSGEHGE 769
Score = 48.5 bits (114), Expect = 5e-06
Identities = 29/60 (48%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGK 99
S G G PG G D GE G PG G G GP G G PG G G PG G+ G PGK
Sbjct: 678 SLGKCGDPGLPGPD---GEPGIPGIGFPGPPGPKGDQGFPGTKGSLGCPGKMGEPGLPGK 734
Score = 47.8 bits (112), Expect = 9e-06
Identities = 34/93 (36%), Positives = 42/93 (45%), Gaps = 19/93 (20%)
Query: 26 EDAQKTCPAVIACSSPGINGFPGKDG-------RDGTKGEKGEPG----QGLRGLQGPPG 74
+DA T + SPG+ G PG G R G G+ G PG G+ G+ GP G
Sbjct: 411 KDAMGTPGSPGCAGSPGLPGSPGPPGPPGDIVFRKGPPGDHGLPGYLGSPGIPGVDGPKG 470
Query: 75 KLG--------PPGNPGPSGSPGPKGQKGDPGK 99
+ G PG PG G PG G KG PG+
Sbjct: 471 EPGLLCTQCPYIPGPPGLPGLPGLHGVKGIPGR 503
Score = 47.8 bits (112), Expect = 9e-06
Identities = 29/66 (43%), Positives = 33/66 (50%), Gaps = 9/66 (13%)
Query: 42 GINGFPGKDGRDGTKGEKGEPG----QGLRGLQGPP-----GKLGPPGNPGPSGSPGPKG 92
G GFPG G G G+ GEPG GL G +G P G G PG PG G+ G G
Sbjct: 709 GDQGFPGTKGSLGCPGKMGEPGLPGKPGLPGAKGEPAVAMPGGPGTPGFPGERGNSGEHG 768
Query: 93 QKGDPG 98
+ G PG
Sbjct: 769 EIGLPG 774
Score = 47.4 bits (111), Expect = 1e-05
Identities = 31/62 (50%), Positives = 32/62 (51%), Gaps = 10/62 (16%)
Query: 42 GINGFPGKDGRDGTKGE-----KGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGD 96
G G PG G G GE KG PG GLQG PGK G PG PG S G KG +G
Sbjct: 265 GAMGEPGPPGPSGLPGESYGSEKGAPGDP--GLQGKPGKDGVPGFPG---SEGVKGNRGF 319
Query: 97 PG 98
PG
Sbjct: 320 PG 321
Score = 47.0 bits (110), Expect = 2e-05
Identities = 28/64 (43%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 41 PGINGFPGKD-----GRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGPSGSPGPKGQK 94
PG +G PG+ G G G +G+PG+ G+ G G G G G PG G G KGQK
Sbjct: 273 PGPSGLPGESYGSEKGAPGDPGLQGKPGKDGVPGFPGSEGVKGNRGFPGLMGEDGIKGQK 332
Query: 95 GDPG 98
GD G
Sbjct: 333 GDIG 336
Score = 47.0 bits (110), Expect = 2e-05
Identities = 26/57 (45%), Positives = 32/57 (56%), Gaps = 8/57 (14%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
G G PGKDG+ GT G GE G +G G+ GP G+ G PG KG++GD G
Sbjct: 1388 GPRGKPGKDGKPGTPGPAGEKGN-----KGSKGEPGPAGS---DGLPGLKGKRGDSG 1436
Score = 43.5 bits (101), Expect = 2e-04
Identities = 24/60 (40%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQGL---RGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
G G G G G G G PG+ +G G PG G PG G G PG +G KG+ G
Sbjct: 259 GEKGDKGAMGEPGPPGPSGLPGESYGSEKGAPGDPGLQGKPGKDGVPGFPGSEGVKGNRG 318
Score = 42.7 bits (99), Expect = 3e-04
Identities = 28/69 (40%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
Query: 29 QKTCPAV---IACSSPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPS 85
QK PA I + G G PG G G G G PG G GPPG G PG GP
Sbjct: 155 QKGAPAKEEDIELDAKGDPGLPGAPGPQGLPGPPGFPGPV--GPPGPPGFFGFPGAMGPR 212
Query: 86 GSPGPKGQK 94
G G G++
Sbjct: 213 GPKGHMGER 221
>gi|38570075 collagen, type XXV, alpha 1 isoform 1 [Homo sapiens]
Length = 654
Score = 70.5 bits (171), Expect = 1e-12
Identities = 34/67 (50%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 39 SSPGINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDP 97
S+ GI G PG+ GR G KGE G PG GL G++G PG +GP G PG G PG KG++G+
Sbjct: 308 SAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGTKGERGEA 367
Query: 98 GKSPDGD 104
G G+
Sbjct: 368 GPPGRGE 374
Score = 66.6 bits (161), Expect = 2e-11
Identities = 33/61 (54%), Positives = 37/61 (60%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGKSP 101
G G PG G GTKGE+GE G RG +G PG GP G G SG+ GPKG KGD G+
Sbjct: 347 GPQGEPGLPGLPGTKGERGEAGPPGRGERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKG 406
Query: 102 D 102
D
Sbjct: 407 D 407
Score = 63.9 bits (154), Expect = 1e-10
Identities = 34/79 (43%), Positives = 42/79 (53%), Gaps = 14/79 (17%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ-------------GLRGLQGPPGKLGPPGNPGPSGS 87
PG+ G PGK G G G G PGQ G +G G PG +G G PGP G
Sbjct: 221 PGVPGEPGKPGEQGLMGPLGPPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGE 280
Query: 88 PGPKGQKGDPGKS-PDGDS 105
PG +G+KGD G++ P GD+
Sbjct: 281 PGEQGEKGDAGENGPKGDT 299
Score = 62.0 bits (149), Expect = 5e-10
Identities = 32/60 (53%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 42 GINGFPGKDGRDGTKGEKGEPG-QG--LRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
G+ G PG +G G KG+ G PG QG + G GPPG GPPG GP G PGPKG G G
Sbjct: 500 GLPGLPGANGMKGEKGDSGMPGPQGPSIIGPPGPPGPHGPPGPMGPHGLPGPKGTDGPMG 559
Score = 58.5 bits (140), Expect = 5e-09
Identities = 36/105 (34%), Positives = 47/105 (44%), Gaps = 33/105 (31%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPGQ----GLRGLQGPPGK-------------------- 75
+PG G G+ G G KG KG+ G+ G +G +GPPG+
Sbjct: 380 APGPKGKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQKGDQGATEIIDYNGNLHEAL 439
Query: 76 --------LGPPGNPGPSGSPGPKGQKGDPG-KSPDGDSSLAASE 111
GPPG PGP G GPKG++G PG DG+ L S+
Sbjct: 440 QRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQGLKGSK 484
Score = 57.8 bits (138), Expect = 9e-09
Identities = 32/66 (48%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGPSGSPGPKG---QKGDP 97
G G PG G +G KGE G PG G G+ GP G+ G G G +G GPKG +KGDP
Sbjct: 246 GSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQGEKGDAGENGPKGDTGEKGDP 305
Query: 98 GKSPDG 103
G S G
Sbjct: 306 GSSAAG 311
Score = 57.8 bits (138), Expect = 9e-09
Identities = 31/70 (44%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPP---GNPGPSGSPGPKGQKGDPG 98
G G G++G G GEKG+PG G++G PG+ G P G PG G PG G KG+PG
Sbjct: 285 GEKGDAGENGPKGDTGEKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPG 344
Query: 99 -KSPDGDSSL 107
P G+ L
Sbjct: 345 FIGPQGEPGL 354
Score = 57.4 bits (137), Expect = 1e-08
Identities = 32/69 (46%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGK 99
PG G G G G G+KGEPG G G G PG G PG G G G G KGD G+
Sbjct: 242 PGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQGEKGDAGENGPKGDTGE 301
Query: 100 SPDGDSSLA 108
D SS A
Sbjct: 302 KGDPGSSAA 310
Score = 56.2 bits (134), Expect = 3e-08
Identities = 30/66 (45%), Positives = 37/66 (56%), Gaps = 7/66 (10%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGK 99
SPGI G G+ G G+KG+ G+PG + G G +G PG PG +G G KG G PG
Sbjct: 468 SPGIPGMDGEQGLKGSKGDMGDPG-----MTGEKGGIGLPGLPGANGMKGEKGDSGMPG- 521
Query: 100 SPDGDS 105
P G S
Sbjct: 522 -PQGPS 526
Score = 54.7 bits (130), Expect = 7e-08
Identities = 32/73 (43%), Positives = 38/73 (52%), Gaps = 15/73 (20%)
Query: 41 PGINGFPGKDGRDGT-----KGEKGEPG-------QGLRGLQGPPGKLGPPGNPGPSGSP 88
PG+ G PG G G +GE+GEPG QG G +GP G G G G SG+
Sbjct: 352 PGLPGLPGTKGERGEAGPPGRGERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKGDSGAQ 411
Query: 89 GPK---GQKGDPG 98
GP+ GQKGD G
Sbjct: 412 GPRGPPGQKGDQG 424
Score = 54.7 bits (130), Expect = 7e-08
Identities = 29/59 (49%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 42 GINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGK 99
G +G G G G KGE+GE G G G +GP G G G PG G PGP+G+KGD G+
Sbjct: 553 GTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFPGPRGEKGDLGE 611
Score = 52.0 bits (123), Expect = 5e-07
Identities = 23/39 (58%), Positives = 27/39 (69%), Gaps = 2/39 (5%)
Query: 60 GEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
G PG+ RG +G G+ GPPG PGP G PGPKG KG+ G
Sbjct: 123 GPPGK--RGKRGRRGESGPPGQPGPQGPPGPKGDKGEQG 159
Score = 50.8 bits (120), Expect = 1e-06
Identities = 27/58 (46%), Positives = 30/58 (51%), Gaps = 8/58 (13%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
PG G PG G+DG +G G PG+ PGK G G GP G PG KG G PG
Sbjct: 203 PGPRGPPGDTGKDGPRGMPGVPGE--------PGKPGEQGLMGPLGPPGQKGSIGAPG 252
Score = 50.4 bits (119), Expect = 1e-06
Identities = 27/58 (46%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGK 99
G G PG G G G+ GEPG L G GP G+ G G G G G KG+KG+PG+
Sbjct: 574 GAMGEPGPRGPYGLPGKDGEPG--LDGFPGPRGEKGDLGEKGEKGFRGVKGEKGEPGQ 629
Score = 50.1 bits (118), Expect = 2e-06
Identities = 31/89 (34%), Positives = 35/89 (39%), Gaps = 31/89 (34%)
Query: 42 GINGFPGKDGRDGTKGEKGEPG-------------------------------QGLRGLQ 70
G G PG G G KG+KGE G QG G
Sbjct: 138 GPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQLIKRRLIKGDQGQAGPP 197
Query: 71 GPPGKLGPPGNPGPSGSPGPKGQKGDPGK 99
GPPG GP G PG +G GP+G G PG+
Sbjct: 198 GPPGPPGPRGPPGDTGKDGPRGMPGVPGE 226
Score = 48.9 bits (115), Expect = 4e-06
Identities = 24/51 (47%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGPSGSPGP 90
PG +G PG DG G +GEKG+ G+ G +G +G G+ G PG PG G P
Sbjct: 588 PGKDGEPGLDGFPGPRGEKGDLGEKGEKGFRGVKGEKGEPGQPGLDGLDAP 638
Score = 48.5 bits (114), Expect = 5e-06
Identities = 26/56 (46%), Positives = 33/56 (58%), Gaps = 6/56 (10%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGK-----LGPPGNPGPSGSPGP 90
PG++GFPG G G GEKGE G +G++G +G PG+ L P GP G P P
Sbjct: 594 PGLDGFPGPRGEKGDLGEKGEKGFRGVKGEKGEPGQPGLDGLDAPCQLGPDGLPMP 649
Score = 46.2 bits (108), Expect = 3e-05
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 13/84 (15%)
Query: 38 CSSPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDP 97
C+ P G PGK G+ G +GE G PPG+ GP G PGP G G +G +G
Sbjct: 118 CNCPA--GPPGKRGKRGRRGESG-----------PPGQPGPQGPPGPKGDKGEQGDQGPR 164
Query: 98 GKSPDGDSSLAASERKALQTEMAR 121
P + +++++ ++ + +
Sbjct: 165 MVFPKINHGFLSADQQLIKRRLIK 188
Score = 46.2 bits (108), Expect = 3e-05
Identities = 30/92 (32%), Positives = 35/92 (38%), Gaps = 35/92 (38%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQ-----------------------------------GL 66
G G G+ G G +G +G PGQ G
Sbjct: 397 GSKGDRGEKGDSGAQGPRGPPGQKGDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGP 456
Query: 67 RGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
+GLQGP G+ G PG PG G G KG KGD G
Sbjct: 457 QGLQGPKGEQGSPGIPGMDGEQGLKGSKGDMG 488
Score = 45.1 bits (105), Expect = 6e-05
Identities = 24/56 (42%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 43 INGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
+ G PG G G +G KGE QG G+ G G+ G G+ G G PG G+KG G
Sbjct: 447 VTGPPGPPGPQGLQGPKGE--QGSPGIPGMDGEQGLKGSKGDMGDPGMTGEKGGIG 500
Score = 43.5 bits (101), Expect = 2e-04
Identities = 24/58 (41%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGK 99
G G G G G G +G PG G GP G G PG PG G G G G PG+
Sbjct: 189 GDQGQAGPPGPPGPPGPRGPPGD--TGKDGPRGMPGVPGEPGKPGEQGLMGPLGPPGQ 244
Score = 40.4 bits (93), Expect = 0.001
Identities = 35/109 (32%), Positives = 38/109 (34%), Gaps = 45/109 (41%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG----------QGLRG---------------------- 68
PG G GK G GT+G KG G QG RG
Sbjct: 378 PGAPGPKGKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQKGDQGATEIIDYNGNLHE 437
Query: 69 ---------LQGPPGKLGPPGNPGP---SGSPGPKGQKGDPG-KSPDGD 104
+ GPPG GP G GP GSPG G G+ G K GD
Sbjct: 438 ALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQGLKGSKGD 486
>gi|38570073 collagen, type XXV, alpha 1 isoform 2 [Homo sapiens]
Length = 642
Score = 70.5 bits (171), Expect = 1e-12
Identities = 34/67 (50%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 39 SSPGINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDP 97
S+ GI G PG+ GR G KGE G PG GL G++G PG +GP G PG G PG KG++G+
Sbjct: 308 SAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGTKGERGEA 367
Query: 98 GKSPDGD 104
G G+
Sbjct: 368 GPPGRGE 374
Score = 66.6 bits (161), Expect = 2e-11
Identities = 33/61 (54%), Positives = 37/61 (60%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGKSP 101
G G PG G GTKGE+GE G RG +G PG GP G G SG+ GPKG KGD G+
Sbjct: 347 GPQGEPGLPGLPGTKGERGEAGPPGRGERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKG 406
Query: 102 D 102
D
Sbjct: 407 D 407
Score = 63.9 bits (154), Expect = 1e-10
Identities = 34/79 (43%), Positives = 42/79 (53%), Gaps = 14/79 (17%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ-------------GLRGLQGPPGKLGPPGNPGPSGS 87
PG+ G PGK G G G G PGQ G +G G PG +G G PGP G
Sbjct: 221 PGVPGEPGKPGEQGLMGPLGPPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGE 280
Query: 88 PGPKGQKGDPGKS-PDGDS 105
PG +G+KGD G++ P GD+
Sbjct: 281 PGEQGEKGDAGENGPKGDT 299
Score = 62.0 bits (149), Expect = 5e-10
Identities = 32/60 (53%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 42 GINGFPGKDGRDGTKGEKGEPG-QG--LRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
G+ G PG +G G KG+ G PG QG + G GPPG GPPG GP G PGPKG G G
Sbjct: 500 GLPGLPGANGMKGEKGDSGMPGPQGPSIIGPPGPPGPHGPPGPMGPHGLPGPKGTDGPMG 559
Score = 58.5 bits (140), Expect = 5e-09
Identities = 36/105 (34%), Positives = 47/105 (44%), Gaps = 33/105 (31%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPGQ----GLRGLQGPPGK-------------------- 75
+PG G G+ G G KG KG+ G+ G +G +GPPG+
Sbjct: 380 APGPKGKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQKGDQGATEIIDYNGNLHEAL 439
Query: 76 --------LGPPGNPGPSGSPGPKGQKGDPG-KSPDGDSSLAASE 111
GPPG PGP G GPKG++G PG DG+ L S+
Sbjct: 440 QRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQGLKGSK 484
Score = 57.8 bits (138), Expect = 9e-09
Identities = 32/66 (48%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGPSGSPGPKG---QKGDP 97
G G PG G +G KGE G PG G G+ GP G+ G G G +G GPKG +KGDP
Sbjct: 246 GSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQGEKGDAGENGPKGDTGEKGDP 305
Query: 98 GKSPDG 103
G S G
Sbjct: 306 GSSAAG 311
Score = 57.8 bits (138), Expect = 9e-09
Identities = 31/70 (44%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPP---GNPGPSGSPGPKGQKGDPG 98
G G G++G G GEKG+PG G++G PG+ G P G PG G PG G KG+PG
Sbjct: 285 GEKGDAGENGPKGDTGEKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPG 344
Query: 99 -KSPDGDSSL 107
P G+ L
Sbjct: 345 FIGPQGEPGL 354
Score = 57.4 bits (137), Expect = 1e-08
Identities = 32/69 (46%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGK 99
PG G G G G G+KGEPG G G G PG G PG G G G G KGD G+
Sbjct: 242 PGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQGEKGDAGENGPKGDTGE 301
Query: 100 SPDGDSSLA 108
D SS A
Sbjct: 302 KGDPGSSAA 310
Score = 56.2 bits (134), Expect = 3e-08
Identities = 30/66 (45%), Positives = 37/66 (56%), Gaps = 7/66 (10%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGK 99
SPGI G G+ G G+KG+ G+PG + G G +G PG PG +G G KG G PG
Sbjct: 468 SPGIPGMDGEQGLKGSKGDMGDPG-----MTGEKGGIGLPGLPGANGMKGEKGDSGMPG- 521
Query: 100 SPDGDS 105
P G S
Sbjct: 522 -PQGPS 526
Score = 54.7 bits (130), Expect = 7e-08
Identities = 32/73 (43%), Positives = 38/73 (52%), Gaps = 15/73 (20%)
Query: 41 PGINGFPGKDGRDGT-----KGEKGEPG-------QGLRGLQGPPGKLGPPGNPGPSGSP 88
PG+ G PG G G +GE+GEPG QG G +GP G G G G SG+
Sbjct: 352 PGLPGLPGTKGERGEAGPPGRGERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKGDSGAQ 411
Query: 89 GPK---GQKGDPG 98
GP+ GQKGD G
Sbjct: 412 GPRGPPGQKGDQG 424
Score = 54.7 bits (130), Expect = 7e-08
Identities = 29/59 (49%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 42 GINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGK 99
G +G G G G KGE+GE G G G +GP G G G PG G PGP+G+KGD G+
Sbjct: 553 GTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFPGPRGEKGDLGE 611
Score = 52.0 bits (123), Expect = 5e-07
Identities = 23/39 (58%), Positives = 27/39 (69%), Gaps = 2/39 (5%)
Query: 60 GEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
G PG+ RG +G G+ GPPG PGP G PGPKG KG+ G
Sbjct: 123 GPPGK--RGKRGRRGESGPPGQPGPQGPPGPKGDKGEQG 159
Score = 50.8 bits (120), Expect = 1e-06
Identities = 27/58 (46%), Positives = 30/58 (51%), Gaps = 8/58 (13%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
PG G PG G+DG +G G PG+ PGK G G GP G PG KG G PG
Sbjct: 203 PGPRGPPGDTGKDGPRGMPGVPGE--------PGKPGEQGLMGPLGPPGQKGSIGAPG 252
Score = 50.1 bits (118), Expect = 2e-06
Identities = 31/89 (34%), Positives = 35/89 (39%), Gaps = 31/89 (34%)
Query: 42 GINGFPGKDGRDGTKGEKGEPG-------------------------------QGLRGLQ 70
G G PG G G KG+KGE G QG G
Sbjct: 138 GPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQLIKRRLIKGDQGQAGPP 197
Query: 71 GPPGKLGPPGNPGPSGSPGPKGQKGDPGK 99
GPPG GP G PG +G GP+G G PG+
Sbjct: 198 GPPGPPGPRGPPGDTGKDGPRGMPGVPGE 226
Score = 49.7 bits (117), Expect = 2e-06
Identities = 28/61 (45%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 42 GINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGKS 100
G +G G G G KG GEPG +G GL G G+ G G PGP G G G+KG+ S
Sbjct: 559 GPHGPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFPGPRGEKGDLGEKGEKVTS 618
Query: 101 P 101
P
Sbjct: 619 P 619
Score = 46.2 bits (108), Expect = 3e-05
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 13/84 (15%)
Query: 38 CSSPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDP 97
C+ P G PGK G+ G +GE G PPG+ GP G PGP G G +G +G
Sbjct: 118 CNCPA--GPPGKRGKRGRRGESG-----------PPGQPGPQGPPGPKGDKGEQGDQGPR 164
Query: 98 GKSPDGDSSLAASERKALQTEMAR 121
P + +++++ ++ + +
Sbjct: 165 MVFPKINHGFLSADQQLIKRRLIK 188
Score = 46.2 bits (108), Expect = 3e-05
Identities = 30/92 (32%), Positives = 35/92 (38%), Gaps = 35/92 (38%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQ-----------------------------------GL 66
G G G+ G G +G +G PGQ G
Sbjct: 397 GSKGDRGEKGDSGAQGPRGPPGQKGDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGP 456
Query: 67 RGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
+GLQGP G+ G PG PG G G KG KGD G
Sbjct: 457 QGLQGPKGEQGSPGIPGMDGEQGLKGSKGDMG 488
Score = 45.1 bits (105), Expect = 6e-05
Identities = 24/56 (42%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 43 INGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
+ G PG G G +G KGE QG G+ G G+ G G+ G G PG G+KG G
Sbjct: 447 VTGPPGPPGPQGLQGPKGE--QGSPGIPGMDGEQGLKGSKGDMGDPGMTGEKGGIG 500
Score = 43.5 bits (101), Expect = 2e-04
Identities = 24/58 (41%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGK 99
G G G G G G +G PG G GP G G PG PG G G G G PG+
Sbjct: 189 GDQGQAGPPGPPGPPGPRGPPGD--TGKDGPRGMPGVPGEPGKPGEQGLMGPLGPPGQ 244
Score = 40.4 bits (93), Expect = 0.001
Identities = 35/109 (32%), Positives = 38/109 (34%), Gaps = 45/109 (41%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG----------QGLRG---------------------- 68
PG G GK G GT+G KG G QG RG
Sbjct: 378 PGAPGPKGKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQKGDQGATEIIDYNGNLHE 437
Query: 69 ---------LQGPPGKLGPPGNPGP---SGSPGPKGQKGDPG-KSPDGD 104
+ GPPG GP G GP GSPG G G+ G K GD
Sbjct: 438 ALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQGLKGSKGD 486
Score = 32.7 bits (73), Expect = 0.30
Identities = 13/21 (61%), Positives = 15/21 (71%)
Query: 41 PGINGFPGKDGRDGTKGEKGE 61
PG++GFPG G G GEKGE
Sbjct: 594 PGLDGFPGPRGEKGDLGEKGE 614
Score = 31.2 bits (69), Expect = 0.88
Identities = 13/24 (54%), Positives = 17/24 (70%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ 64
PG +G PG DG G +GEKG+ G+
Sbjct: 588 PGKDGEPGLDGFPGPRGEKGDLGE 611
>gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens]
Length = 1860
Score = 70.1 bits (170), Expect = 2e-12
Identities = 30/59 (50%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
PG+ G G +G+ G +GEKG G +G +G QG G++G PG+PGP G+PGPKG +G G
Sbjct: 1233 PGVTGVRGPEGKSGKQGEKGRTGAKGAKGYQGQLGEMGVPGDPGPPGTPGPKGSRGSLG 1291
Score = 67.4 bits (163), Expect = 1e-11
Identities = 38/83 (45%), Positives = 49/83 (59%), Gaps = 10/83 (12%)
Query: 42 GINGFPGKDGRDGTKGEKGEPG-------QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQK 94
G G PG G G +G++GEPG +G++GL+G PG+ G PG+PGP G PGPKG K
Sbjct: 1340 GPPGPPGDRGPVGDRGDRGEPGDPGYPGQEGVQGLRGKPGQQGQPGHPGPRGWPGPKGSK 1399
Query: 95 GDPGKSPDGDSSLA-ASERKALQ 116
G G P G A A R+ +Q
Sbjct: 1400 GAEG--PKGKQGKAGAPGRRGVQ 1420
Score = 64.7 bits (156), Expect = 7e-11
Identities = 34/62 (54%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGK 99
P + G PG G G G G PG G+ G +GP G GP GNPG G PG KGQKGDPG
Sbjct: 621 PLLMGPPGPKGDCGLPGPPGLPGLPGIPGARGPRGPPGPYGNPGLPGPPGAKGQKGDPGL 680
Query: 100 SP 101
SP
Sbjct: 681 SP 682
Score = 64.7 bits (156), Expect = 7e-11
Identities = 31/60 (51%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGK 99
PG GFPG G G G +G G+ G RGL GP G+LGP G+ GP G PG G +G PG+
Sbjct: 906 PGPEGFPGDIGPPGDNGPEGMKGKPGARGLPGPRGQLGPEGDEGPMGPPGAPGLEGQPGR 965
Score = 63.2 bits (152), Expect = 2e-10
Identities = 31/61 (50%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGK 99
S G G PG G GTKG GEPG QGP G +GPPG GP G PG G+ G PG+
Sbjct: 1109 SRGFPGIPGPSGPPGTKGLPGEPGP-----QGPQGPIGPPGEMGPKGPPGAVGEPGLPGE 1163
Query: 100 S 100
+
Sbjct: 1164 A 1164
Score = 62.4 bits (150), Expect = 4e-10
Identities = 35/89 (39%), Positives = 42/89 (47%), Gaps = 26/89 (29%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ-------------------------GLRGLQGPPGK 75
PG GFPG+ G DG KGE G+PG+ G RG+ GPPG
Sbjct: 963 PGRKGFPGRPGLDGVKGEPGDPGRPGPVGEQGFMGFIGLVGEPGIVGEKGDRGMMGPPGV 1022
Query: 76 LGPPGNPGPSGSPGPKGQKGDPG-KSPDG 103
GP G+ G G PG G G+PG + P G
Sbjct: 1023 PGPKGSMGHPGMPGGMGTPGEPGPQGPPG 1051
Score = 62.0 bits (149), Expect = 5e-10
Identities = 34/76 (44%), Positives = 38/76 (50%), Gaps = 11/76 (14%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPGQ----GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKG 95
+PG+ G PG G G KGE G PGQ G RG +G G G G PG G PG G+ G
Sbjct: 1476 NPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGRTGLPGNQGEPGSKGQPGDSGEMG 1535
Query: 96 DPG-------KSPDGD 104
PG K P GD
Sbjct: 1536 FPGMAGLFGPKGPPGD 1551
Score = 60.1 bits (144), Expect = 2e-09
Identities = 32/74 (43%), Positives = 37/74 (50%), Gaps = 16/74 (21%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG----------------QGLRGLQGPPGKLGPPGNPGP 84
PG G PG G G KG+KG+PG GL G GPPG+ G G PGP
Sbjct: 657 PGPYGNPGLPGPPGAKGQKGDPGLSPGKAHDGAKGDMGLPGLSGNPGPPGRKGHKGYPGP 716
Query: 85 SGSPGPKGQKGDPG 98
+G PG +GQ G G
Sbjct: 717 AGHPGEQGQPGPEG 730
Score = 59.3 bits (142), Expect = 3e-09
Identities = 29/59 (49%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
S G+ GFPG G+ G G+ G+ G G GPPG G PG+ GP G GP+G KG PG
Sbjct: 875 SQGLPGFPGARGKPGPLGKVGDKGS--IGFPGPPGPEGFPGDIGPPGDNGPEGMKGKPG 931
Score = 58.9 bits (141), Expect = 4e-09
Identities = 36/89 (40%), Positives = 41/89 (46%), Gaps = 26/89 (29%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG----QGLRGLQGPPGKLGPPGNPG------------- 83
PG G PG G G +G +G G QG RGL+GPPG G PG PG
Sbjct: 1050 PGSRGPPGMRGAKGRRGPRGPDGPAGEQGSRGLKGPPGPQGRPGRPGQQGVAGERGHLGS 1109
Query: 84 --------PSGSPGPKGQKGDPG-KSPDG 103
PSG PG KG G+PG + P G
Sbjct: 1110 RGFPGIPGPSGPPGTKGLPGEPGPQGPQG 1138
Score = 58.5 bits (140), Expect = 5e-09
Identities = 32/75 (42%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPGQ----------GLRGLQGPPGKLGPPGNPGPSGSPG 89
S G+ G PG GR G G++G G+ G+ G GPPG G PG PGP G G
Sbjct: 1079 SRGLKGPPGPQGRPGRPGQQGVAGERGHLGSRGFPGIPGPSGPPGTKGLPGEPGPQGPQG 1138
Query: 90 PKGQKGDPG-KSPDG 103
P G G+ G K P G
Sbjct: 1139 PIGPPGEMGPKGPPG 1153
Score = 58.5 bits (140), Expect = 5e-09
Identities = 30/64 (46%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGKS 100
PG G PG+ G+ G GE+G G RG G PG GPPG G G PGP+G +G G
Sbjct: 1086 PGPQGRPGRPGQQGVAGERGHLGS--RGFPGIPGPSGPPGTKGLPGEPGPQGPQGPIG-- 1141
Query: 101 PDGD 104
P G+
Sbjct: 1142 PPGE 1145
Score = 58.5 bits (140), Expect = 5e-09
Identities = 28/63 (44%), Positives = 39/63 (61%), Gaps = 4/63 (6%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG----QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGD 96
PG+ G G G DG KG++G+PG G +G +G G+ GPPG PG +G GP+G+ G
Sbjct: 1188 PGLEGDSGPMGPDGLKGDRGDPGPDGEHGEKGQEGLMGEDGPPGPPGVTGVRGPEGKSGK 1247
Query: 97 PGK 99
G+
Sbjct: 1248 QGE 1250
Score = 58.2 bits (139), Expect = 7e-09
Identities = 31/62 (50%), Positives = 35/62 (56%), Gaps = 7/62 (11%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG----QGLRGLQGPPGKLGPPGN---PGPSGSPGPKGQ 93
PG++G PG GR G KG G G QG G +G PG G PG PGP G PGPKG
Sbjct: 696 PGLSGNPGPPGRKGHKGYPGPAGHPGEQGQPGPEGSPGAKGYPGRQGLPGPVGDPGPKGS 755
Query: 94 KG 95
+G
Sbjct: 756 RG 757
Score = 58.2 bits (139), Expect = 7e-09
Identities = 35/90 (38%), Positives = 44/90 (48%), Gaps = 26/90 (28%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQ----------------GLRGLQGPPG---------KL 76
G +G PG+DG+ G +GE+G+ G GL G QGPPG +L
Sbjct: 1442 GPDGLPGRDGQAGQQGEQGDDGDPGPMGPAGKRGNPGVAGLPGAQGPPGFKGESGLPGQL 1501
Query: 77 GPPGNPGPSGSPGPKGQKGDPG-KSPDGDS 105
GPPG G G G G +G+PG K GDS
Sbjct: 1502 GPPGKRGTEGRTGLPGNQGEPGSKGQPGDS 1531
Score = 57.4 bits (137), Expect = 1e-08
Identities = 32/64 (50%), Positives = 38/64 (59%), Gaps = 7/64 (10%)
Query: 42 GINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLG------PPGNPGPSGSPGPKGQK 94
G GFPG G G KG G+ G +G++G +GPPG +G P G GPSG PGPKG K
Sbjct: 1532 GEMGFPGMAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGIVGPLGILGPSGLPGPKGDK 1591
Query: 95 GDPG 98
G G
Sbjct: 1592 GSRG 1595
Score = 57.0 bits (136), Expect = 1e-08
Identities = 27/59 (45%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGK 99
PG G PG+ G G +G G PG+ G +GPPG +G PG PG +G G G G PG+
Sbjct: 1122 PGTKGLPGEPGPQGPQGPIGPPGE--MGPKGPPGAVGEPGLPGEAGMKGDLGPLGTPGE 1178
Score = 56.2 bits (134), Expect = 3e-08
Identities = 31/63 (49%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGK 99
PG+ G G G DG GE G PG G+ GL G G LGP G PGP G G G G+PG
Sbjct: 792 PGVFGERGPPGLDGNPGELGLPGPPGVPGLIGDLGVLGPIGYPGPKGMKGLMGSVGEPGL 851
Query: 100 SPD 102
D
Sbjct: 852 KGD 854
Score = 56.2 bits (134), Expect = 3e-08
Identities = 33/78 (42%), Positives = 40/78 (51%), Gaps = 19/78 (24%)
Query: 40 SPGINGF------PGKDGRDGTKGEKGEPGQ----------GLRGLQGPPGKLGPPGN-- 81
+PG+ G PG+ G DG KGE G+PG+ G GL G PG +G G+
Sbjct: 956 APGLEGQPGRKGFPGRPGLDGVKGEPGDPGRPGPVGEQGFMGFIGLVGEPGIVGEKGDRG 1015
Query: 82 -PGPSGSPGPKGQKGDPG 98
GP G PGPKG G PG
Sbjct: 1016 MMGPPGVPGPKGSMGHPG 1033
Score = 55.8 bits (133), Expect = 3e-08
Identities = 29/58 (50%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 42 GINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
G+ G G+ G G KGE+G PG G G QG G G PG PG G PGP G+ GD G
Sbjct: 841 GLMGSVGEPGLKGDKGEQGVPGVSGDPGFQGDKGSQGLPGFPGARGKPGPLGKVGDKG 898
Score = 55.8 bits (133), Expect = 3e-08
Identities = 31/65 (47%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG- 98
PG G G G G G GEPG QG G +GPPG G G GP G GP G++G G
Sbjct: 1023 PGPKGSMGHPGMPGGMGTPGEPGPQGPPGSRGPPGMRGAKGRRGPRGPDGPAGEQGSRGL 1082
Query: 99 KSPDG 103
K P G
Sbjct: 1083 KGPPG 1087
Score = 55.8 bits (133), Expect = 3e-08
Identities = 29/60 (48%), Positives = 37/60 (61%), Gaps = 8/60 (13%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGKS 100
PG G+P G++G +G +G+PGQ QG PG GP G PGP GS G +G KG GK+
Sbjct: 1360 PGDPGYP---GQEGVQGLRGKPGQ-----QGQPGHPGPRGWPGPKGSKGAEGPKGKQGKA 1411
Score = 54.3 bits (129), Expect = 1e-07
Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
PG G PG G+ G +G++G G G GL+G PG+ G PG PG G G G G PG
Sbjct: 930 PGARGLPGPRGQLGPEGDEGPMGPPGAPGLEGQPGRKGFPGRPGLDGVKGEPGDPGRPG 988
Score = 53.5 bits (127), Expect = 2e-07
Identities = 29/79 (36%), Positives = 37/79 (46%), Gaps = 19/79 (24%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPG-------------------QGLRGLQGPPGKLGPPG 80
SPG G+PG+ G G G+ G G +GL G+ G GK+G PG
Sbjct: 731 SPGAKGYPGRQGLPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGKMGMPG 790
Query: 81 NPGPSGSPGPKGQKGDPGK 99
PG G GP G G+PG+
Sbjct: 791 FPGVFGERGPPGLDGNPGE 809
Score = 53.5 bits (127), Expect = 2e-07
Identities = 27/59 (45%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGK 99
PG+ G G G G G G PG+ G QGPPG GPPG G G GP+G G G+
Sbjct: 1020 PGVPGPKGSMGHPGMPGGMGTPGEP--GPQGPPGSRGPPGMRGAKGRRGPRGPDGPAGE 1076
Score = 53.1 bits (126), Expect = 2e-07
Identities = 33/78 (42%), Positives = 39/78 (50%), Gaps = 14/78 (17%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG----------QGLRGLQGPPGKLGPPGNPG---PSGS 87
PG G+PG G G +G KG+ G QGL+GL GP G +G G G P G
Sbjct: 1387 PGPRGWPGPKGSKGAEGPKGKQGKAGAPGRRGVQGLQGLPGPRGVVGRQGLEGIAGPDGL 1446
Query: 88 PGPKGQKGDPG-KSPDGD 104
PG GQ G G + DGD
Sbjct: 1447 PGRDGQAGQQGEQGDDGD 1464
Score = 52.8 bits (125), Expect = 3e-07
Identities = 27/60 (45%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
S G G PG G G G +G PG +G G++G G+ GP G GP+G G +G KG PG
Sbjct: 1028 SMGHPGMPGGMGTPGEPGPQGPPGSRGPPGMRGAKGRRGPRGPDGPAGEQGSRGLKGPPG 1087
Score = 52.4 bits (124), Expect = 4e-07
Identities = 28/59 (47%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPG---NPGPSGSPGPKGQKG 95
PG+ G PG DG G G G+ G+ G+ G G G+ GPPG NPG G PGP G G
Sbjct: 762 PGLFGLPGSDGERGLPGVPGKRGKMGMPGFPGVFGERGPPGLDGNPGELGLPGPPGVPG 820
Score = 52.4 bits (124), Expect = 4e-07
Identities = 37/95 (38%), Positives = 43/95 (45%), Gaps = 18/95 (18%)
Query: 42 GINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGS------------- 87
G G PG G G +G +G PG G G+ GP G LGP G PGP G
Sbjct: 1544 GPKGPPGDIGFKGIQGPRGPPGLMGKEGIVGPLGILGPSGLPGPKGDKGSRGDWGLQGPR 1603
Query: 88 --PGPKGQKGDPGKSPDGDSSLAASE-RKALQTEM 119
PGP+G+ G PG P G L + A QT M
Sbjct: 1604 GPPGPRGRPGPPG-PPGGPIQLQQDDLGAAFQTWM 1637
Score = 52.0 bits (123), Expect = 5e-07
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGK 99
PG G G G GT GE+G GQ G GL+G G +GP G G G PGP G+ G+ G+
Sbjct: 1161 PGEAGMKGDLGPLGTPGEQGLIGQRGEPGLEGDSGPMGPDGLKGDRGDPGPDGEHGEKGQ 1220
Score = 51.2 bits (121), Expect = 8e-07
Identities = 28/65 (43%), Positives = 35/65 (53%), Gaps = 8/65 (12%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGS------PGPKGQK 94
PG G PG+ G G G +G PG +RG +G G GP G G GS PGP+G+
Sbjct: 1035 PGGMGTPGEPGPQGPPGSRGPPG--MRGAKGRRGPRGPDGPAGEQGSRGLKGPPGPQGRP 1092
Query: 95 GDPGK 99
G PG+
Sbjct: 1093 GRPGQ 1097
Score = 50.8 bits (120), Expect = 1e-06
Identities = 30/69 (43%), Positives = 34/69 (49%), Gaps = 10/69 (14%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ----GLRGLQGPPGKLGPPGNPGPSGSP------GP 90
PG NG G G+ G +G G GQ G G GPPG G G PG G P G
Sbjct: 918 PGDNGPEGMKGKPGARGLPGPRGQLGPEGDEGPMGPPGAPGLEGQPGRKGFPGRPGLDGV 977
Query: 91 KGQKGDPGK 99
KG+ GDPG+
Sbjct: 978 KGEPGDPGR 986
Score = 48.5 bits (114), Expect = 5e-06
Identities = 27/58 (46%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDP 97
PG+ G G G G G G PG +G +G +G G GP G PGP G PGP G G P
Sbjct: 1564 PGLMGKEGIVGPLGILGPSGLPGPKGDKGSRGDWGLQGPRGPPGPRGRPGPPGPPGGP 1621
Score = 47.4 bits (111), Expect = 1e-05
Identities = 31/77 (40%), Positives = 37/77 (48%), Gaps = 14/77 (18%)
Query: 37 ACSSPGINGFPGKDG------RDGTKGEKGEPGQG--LRGLQGPPGKLGPPGN------P 82
A PG+ G+ G G G KGEKGE G+ G GPPG GP G+ P
Sbjct: 1301 AQGEPGLAGYDGHKGIVGPLGPPGPKGEKGEQGEDGKAEGPPGPPGDRGPVGDRGDRGEP 1360
Query: 83 GPSGSPGPKGQKGDPGK 99
G G PG +G +G GK
Sbjct: 1361 GDPGYPGQEGVQGLRGK 1377
Score = 47.0 bits (110), Expect = 2e-05
Identities = 27/64 (42%), Positives = 32/64 (50%), Gaps = 10/64 (15%)
Query: 42 GINGFPGKDGRDGTKGEKGEPG-------QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQK 94
G G G GR G +G +G PG QGL G+ GP G PG G +G G +G
Sbjct: 1406 GKQGKAGAPGRRGVQGLQGLPGPRGVVGRQGLEGIAGPDGL---PGRDGQAGQQGEQGDD 1462
Query: 95 GDPG 98
GDPG
Sbjct: 1463 GDPG 1466
Score = 45.4 bits (106), Expect = 4e-05
Identities = 27/70 (38%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPG----QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKG 95
+PG G PG G G G+ G G G +G++G G +G PG G G G G G
Sbjct: 806 NPGELGLPGPPGVPGLIGDLGVLGPIGYPGPKGMKGLMGSVGEPGLKGDKGEQGVPGVSG 865
Query: 96 DPGKSPDGDS 105
DPG D S
Sbjct: 866 DPGFQGDKGS 875
>gi|11386161 alpha 2 type IX collagen [Homo sapiens]
Length = 689
Score = 70.1 bits (170), Expect = 2e-12
Identities = 36/76 (47%), Positives = 44/76 (57%), Gaps = 16/76 (21%)
Query: 41 PGINGFPGKDGRDGTKGE---------KGEPGQ-------GLRGLQGPPGKLGPPGNPGP 84
PG +G PGK+G G +GE KG+ G+ G +G QGP G+ GPPG PGP
Sbjct: 360 PGFSGPPGKEGEPGPRGEIGPQGIMGQKGDQGERGPVGQPGPQGRQGPKGEQGPPGIPGP 419
Query: 85 SGSPGPKGQKGDPGKS 100
G PG KG KG PGK+
Sbjct: 420 QGLPGVKGDKGSPGKT 435
Score = 64.7 bits (156), Expect = 7e-11
Identities = 32/59 (54%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 42 GINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGK 99
G+ G PG+ G G G++GEPG QGL G GPPGK G PG G G G GQKGD G+
Sbjct: 334 GLAGVPGQPGTKGGPGDQGEPGPQGLPGFSGPPGKEGEPGPRGEIGPQGIMGQKGDQGE 392
Score = 63.5 bits (153), Expect = 2e-10
Identities = 41/89 (46%), Positives = 47/89 (52%), Gaps = 26/89 (29%)
Query: 41 PGINGFPGKDGRDGTKGE---------KGEPG-QGLRGLQGPPGKLGPPGNPGP--SGSP 88
PG G PGK G DG G+ KGEPG G+ G++G PG GPPG PGP +G P
Sbjct: 62 PGPKGEPGKAGPDGPDGKPGIDGLTGAKGEPGPMGIPGVKGQPGLPGPPGLPGPGFAGPP 121
Query: 89 GP------------KGQKGDPGKSPDGDS 105
GP +G KGDPG PDG S
Sbjct: 122 GPPGPVGLPGEIGIRGPKGDPG--PDGPS 148
Score = 62.4 bits (150), Expect = 4e-10
Identities = 31/68 (45%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 34 AVIACSSPGINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKG 92
A+ A PG G G GR G KG++G PG +G +G+ GP G GPPG G G+PG G
Sbjct: 257 AIGATGPPGEEGPRGPPGRAGEKGDEGSPGIRGPQGITGPKGATGPPGINGKDGTPGTPG 316
Query: 93 QKGDPGKS 100
KG G++
Sbjct: 317 MKGSAGQA 324
Score = 61.6 bits (148), Expect = 6e-10
Identities = 31/65 (47%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 37 ACSSPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGN---PGPSGSPGPKGQ 93
A PG G PG G+ G G G PG G G GPPG +G PG GP G PGP G
Sbjct: 88 AKGEPGPMGIPGVKGQPGLPGPPGLPGPGFAGPPGPPGPVGLPGEIGIRGPKGDPGPDGP 147
Query: 94 KGDPG 98
G PG
Sbjct: 148 SGPPG 152
Score = 59.7 bits (143), Expect = 2e-09
Identities = 33/70 (47%), Positives = 37/70 (52%), Gaps = 7/70 (10%)
Query: 37 ACSSPGINGFPGKDGRDGTKGEKGEPGQ----GLRGLQGPPGKLGPPGNPGPSGSPGPKG 92
A PGING G G G KG G+ GQ G +GL G PG+ G G PG G PGP+G
Sbjct: 299 ATGPPGINGKDGTPGTPGMKGSAGQAGQPGSPGHQGLAGVPGQPGTKGGPGDQGEPGPQG 358
Query: 93 Q---KGDPGK 99
G PGK
Sbjct: 359 LPGFSGPPGK 368
Score = 58.5 bits (140), Expect = 5e-09
Identities = 30/65 (46%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 35 VIACSSPGINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGPSGSPGPKGQ 93
V+ + I G PG+ G G G G PG G+ G GPPGK GPPG G G GP G
Sbjct: 17 VVVLALAQIRGPPGERGPPGPPGPPGVPGSDGIDGDNGPPGKAGPPGPKGEPGKAGPDGP 76
Query: 94 KGDPG 98
G PG
Sbjct: 77 DGKPG 81
Score = 58.5 bits (140), Expect = 5e-09
Identities = 30/71 (42%), Positives = 36/71 (50%), Gaps = 10/71 (14%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQ----------GLRGLQGPPGKLGPPGNPGPSGSPGPK 91
G G PG G G KG+KG PG+ G+ GL G G+ G G PGP G G +
Sbjct: 412 GPPGIPGPQGLPGVKGDKGSPGKTGPRGKVGDPGVAGLPGEKGEKGESGEPGPKGQQGVR 471
Query: 92 GQKGDPGKSPD 102
G+ G PG S D
Sbjct: 472 GEPGYPGPSGD 482
Score = 58.2 bits (139), Expect = 7e-09
Identities = 29/59 (49%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
PG+ G PG+ G G GE G GQ G+RG G PG G G PG G PGP G +G G
Sbjct: 444 PGVAGLPGEKGEKGESGEPGPKGQQGVRGEPGYPGPSGDAGAPGVQGYPGPPGPRGLAG 502
Score = 55.8 bits (133), Expect = 3e-08
Identities = 28/58 (48%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
PG G G G G KGE G G +G+ G G GPPG GP G PG G+KGD G
Sbjct: 228 PGPQGIRGYPGMAGPKGETGP--HGYKGMVGAIGATGPPGEEGPRGPPGRAGEKGDEG 283
Score = 55.5 bits (132), Expect = 4e-08
Identities = 36/87 (41%), Positives = 41/87 (47%), Gaps = 26/87 (29%)
Query: 45 GFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGP------------------- 84
G PG GR G KGE+G PG G +GL G G G PG GP
Sbjct: 397 GQPGPQGRQGPKGEQGPPGIPGPQGLPGVKGDKGSPGKTGPRGKVGDPGVAGLPGEKGEK 456
Query: 85 --SGSPGPKGQ---KGDPG-KSPDGDS 105
SG PGPKGQ +G+PG P GD+
Sbjct: 457 GESGEPGPKGQQGVRGEPGYPGPSGDA 483
Score = 54.3 bits (129), Expect = 1e-07
Identities = 29/58 (50%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 42 GINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
GI G PG G+ G KG+ G G QG+ G GP G G PG GP G GP G KG G
Sbjct: 199 GILGDPGHQGKPGPKGDVGASGEQGIPGPPGPQGIRGYPGMAGPKGETGPHGYKGMVG 256
Score = 52.0 bits (123), Expect = 5e-07
Identities = 30/93 (32%), Positives = 39/93 (41%), Gaps = 34/93 (36%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPGQ-GLRGLQ---------------------------- 70
+PG+ G+PG G G G +G PGQ G +G++
Sbjct: 485 APGVQGYPGPPGPRGLAGNRGVPGQPGRQGVEGRDATDQHIVDVALKMLQEQLAEVAVSA 544
Query: 71 -----GPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
G G +GPPG PGP G PG +G G PG
Sbjct: 545 KREALGAVGMMGPPGPPGPPGYPGKQGPHGHPG 577
Score = 50.8 bits (120), Expect = 1e-06
Identities = 29/64 (45%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG-K 99
GI G+PG G G G G G G G GPPG+ GP G PG +G KG +G PG +
Sbjct: 232 GIRGYPGMAGPKGETGPHGYKGMVGAIGATGPPGEEGPRGPPGRAGE---KGDEGSPGIR 288
Query: 100 SPDG 103
P G
Sbjct: 289 GPQG 292
Score = 50.8 bits (120), Expect = 1e-06
Identities = 28/63 (44%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSP-----GPKGQKG 95
PGI G G+ G G KG++GE G +G PG GPPG PG G P G G +G
Sbjct: 582 PGIVGAVGQIGNTGPKGKRGEKGDPGEVGRGHPGMPGPPGIPGLPGRPGQAINGKDGDRG 641
Query: 96 DPG 98
PG
Sbjct: 642 SPG 644
Score = 50.1 bits (118), Expect = 2e-06
Identities = 28/75 (37%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Query: 32 CPAVIACSSPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPK 91
CP G G G G G +G G+PG +G GP G +G G G G PGP+
Sbjct: 174 CPTNCPPGMKGPPGLQGVKGHAGKRGILGDPGH--QGKPGPKGDVGASGEQGIPGPPGPQ 231
Query: 92 GQKGDPGKS-PDGDS 105
G +G PG + P G++
Sbjct: 232 GIRGYPGMAGPKGET 246
Score = 50.1 bits (118), Expect = 2e-06
Identities = 32/81 (39%), Positives = 38/81 (46%), Gaps = 16/81 (19%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG----QGLRG---LQGPPGKLGPPGNPG---------P 84
PG G PG G G GE+G PG QG+RG + GP G+ GP G G P
Sbjct: 204 PGHQGKPGPKGDVGASGEQGIPGPPGPQGIRGYPGMAGPKGETGPHGYKGMVGAIGATGP 263
Query: 85 SGSPGPKGQKGDPGKSPDGDS 105
G GP+G G G+ D S
Sbjct: 264 PGEEGPRGPPGRAGEKGDEGS 284
Score = 49.3 bits (116), Expect = 3e-06
Identities = 31/85 (36%), Positives = 38/85 (44%), Gaps = 27/85 (31%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQG--LRGLQG----------PPGKLGPPG--------- 80
G G PG DG G G G+PG+ ++GL+G PPG GPPG
Sbjct: 137 GPKGDPGPDGPSGPPGPPGKPGRPGTIQGLEGSADFLCPTNCPPGMKGPPGLQGVKGHAG 196
Query: 81 ------NPGPSGSPGPKGQKGDPGK 99
+PG G PGPKG G G+
Sbjct: 197 KRGILGDPGHQGKPGPKGDVGASGE 221
Score = 48.5 bits (114), Expect = 5e-06
Identities = 27/68 (39%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 37 ACSSPGINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKG 95
A + G+ G PG G G G++G G G RG+ G G +G GN GP G G KG G
Sbjct: 548 ALGAVGMMGPPGPPGPPGYPGKQGPHGHPGPRGVPGIVGAVGQIGNTGPKGKRGEKGDPG 607
Query: 96 DPGKSPDG 103
+ G+ G
Sbjct: 608 EVGRGHPG 615
Score = 47.8 bits (112), Expect = 9e-06
Identities = 25/61 (40%), Positives = 30/61 (49%)
Query: 29 QKTCPAVIACSSPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSP 88
+K P + PG+ G PG G G G+ G RG G PG+ G PG PGP G P
Sbjct: 602 EKGDPGEVGRGHPGMPGPPGIPGLPGRPGQAINGKDGDRGSPGAPGEAGRPGLPGPVGLP 661
Query: 89 G 89
G
Sbjct: 662 G 662
Score = 47.8 bits (112), Expect = 9e-06
Identities = 23/51 (45%), Positives = 24/51 (47%)
Query: 45 GFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKG 95
G PG G G G G PGQ + G G G G PG G G PGP G G
Sbjct: 612 GHPGMPGPPGIPGLPGRPGQAINGKDGDRGSPGAPGEAGRPGLPGPVGLPG 662
Score = 47.0 bits (110), Expect = 2e-05
Identities = 32/90 (35%), Positives = 34/90 (37%), Gaps = 25/90 (27%)
Query: 29 QKTCPAVIACSSPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSP 88
Q P PG G PG G G GE G+RG +G PG GP G PGP G P
Sbjct: 103 QPGLPGPPGLPGPGFAGPPGPPGPVGLPGE-----IGIRGPKGDPGPDGPSGPPGPPGKP 157
Query: 89 G--------------------PKGQKGDPG 98
G P G KG PG
Sbjct: 158 GRPGTIQGLEGSADFLCPTNCPPGMKGPPG 187
>gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens]
Length = 1499
Score = 69.7 bits (169), Expect = 2e-12
Identities = 32/59 (54%), Positives = 36/59 (61%), Gaps = 5/59 (8%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
SPG+ G G DG G KG G PG GPPG GPPG+PGP GS GP+G +G PG
Sbjct: 415 SPGLPGAIGTDGTPGAKGPTGSPGTS-----GPPGSAGPPGSPGPQGSTGPQGIRGQPG 468
Score = 66.2 bits (160), Expect = 2e-11
Identities = 35/65 (53%), Positives = 36/65 (55%), Gaps = 7/65 (10%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKL------GPPGNPGPSGSPGPKGQ 93
PG G PGKDG G G G PG G RG QGPPG GPPG PG G PG +G
Sbjct: 638 PGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGV 697
Query: 94 KGDPG 98
GDPG
Sbjct: 698 PGDPG 702
Score = 65.5 bits (158), Expect = 4e-11
Identities = 32/73 (43%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGKSP 101
G+ G PG G +G G G PG+ G GPPG +G G PG G PGPKG GDPGK
Sbjct: 573 GLTGNPGVQGPEGKLGPLGAPGED--GRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPG 630
Query: 102 DGDSSLAASERKA 114
+ ++ +R A
Sbjct: 631 EAGNAGVPGQRGA 643
Score = 65.5 bits (158), Expect = 4e-11
Identities = 29/57 (50%), Positives = 37/57 (64%), Gaps = 5/57 (8%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
G +G PG+DG G +G++G+PG G PG G PG PGP G+PG GQ+GDPG
Sbjct: 1053 GNDGTPGRDGAVGERGDRGDPGPA-----GLPGSQGAPGTPGPVGAPGDAGQRGDPG 1104
Score = 63.9 bits (154), Expect = 1e-10
Identities = 35/77 (45%), Positives = 40/77 (51%), Gaps = 14/77 (18%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG----------QGLRGLQGPPGKLGPPGNPGPSGSPGP 90
PG GFPG GR G G G PG +G GL+G PG G G+ GP+G PG
Sbjct: 905 PGATGFPGSAGRVGPPGPAGAPGPAGPLGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGG 964
Query: 91 KGQKGDPGK----SPDG 103
G KGDPG+ PDG
Sbjct: 965 PGDKGDPGEDGQPGPDG 981
Score = 62.8 bits (151), Expect = 3e-10
Identities = 35/64 (54%), Positives = 40/64 (62%), Gaps = 7/64 (10%)
Query: 42 GINGFPGKDGRDGTKGE---KGEPG-QGLRGLQGPPG---KLGPPGNPGPSGSPGPKGQK 94
GI G PG G G KGE KGEPG G++G GPPG K GP G+PG G PGP G++
Sbjct: 462 GIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPVGER 521
Query: 95 GDPG 98
G PG
Sbjct: 522 GAPG 525
Score = 62.4 bits (150), Expect = 4e-10
Identities = 31/63 (49%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGK 99
PG G PG G GT G G PG G RG G G +GPPG G G PGP+G +GD G
Sbjct: 1073 PGPAGLPGSQGAPGTPGPVGAPGDAGQRGDPGSRGPIGPPGRAGKRGLPGPQGPRGDKGD 1132
Query: 100 SPD 102
D
Sbjct: 1133 HGD 1135
Score = 62.0 bits (149), Expect = 5e-10
Identities = 37/92 (40%), Positives = 42/92 (45%), Gaps = 34/92 (36%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQ----------------------------GLRGLQGPP 73
G G G DG+ G KGE GEPGQ G RG QGPP
Sbjct: 846 GFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPP 905
Query: 74 GKLGPPGN------PGPSGSPGPKGQKGDPGK 99
G G PG+ PGP+G+PGP G G+PGK
Sbjct: 906 GATGFPGSAGRVGPPGPAGAPGPAGPLGEPGK 937
Score = 61.6 bits (148), Expect = 6e-10
Identities = 35/73 (47%), Positives = 39/73 (53%), Gaps = 8/73 (10%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG----QGLRGLQGPPGKLGPPGNP---GPSGSPGPKGQ 93
PG +GFPG G G G G G QG RG GPPG +G PG P G G+PG KG
Sbjct: 374 PGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPVGSPGLPGAIGTDGTPGAKGP 433
Query: 94 KGDPGKS-PDGDS 105
G PG S P G +
Sbjct: 434 TGSPGTSGPPGSA 446
Score = 60.5 bits (145), Expect = 1e-09
Identities = 32/61 (52%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 45 GFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGKSPDG 103
G PG+DGR G G G GQ G GL GP G G PG PG +G+ G GQ+G PGK DG
Sbjct: 591 GAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGK--DG 648
Query: 104 D 104
+
Sbjct: 649 E 649
Score = 60.1 bits (144), Expect = 2e-09
Identities = 31/64 (48%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPG----QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKG 95
+PG GFPG DG G KG +GE G G +G QG PG+ G PG PG G G G +G
Sbjct: 523 APGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQG 582
Query: 96 DPGK 99
GK
Sbjct: 583 PEGK 586
Score = 59.3 bits (142), Expect = 3e-09
Identities = 30/59 (50%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 42 GINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGK 99
G G PG G G GE+G PG +G G G PG G G GP GS GPKG +GDPG+
Sbjct: 504 GPRGDPGTVGPPGPVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGR 562
Score = 58.9 bits (141), Expect = 4e-09
Identities = 31/63 (49%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
Query: 41 PGINGFPGKDGR---DGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGD 96
PGI G PG+ G G G KG PG G G GPPG G PG G +G+PGPKG +G
Sbjct: 722 PGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGLQGMPGERGIAGTPGPKGDRGG 781
Query: 97 PGK 99
G+
Sbjct: 782 IGE 784
Score = 58.9 bits (141), Expect = 4e-09
Identities = 31/71 (43%), Positives = 35/71 (49%), Gaps = 13/71 (18%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG-------------QGLRGLQGPPGKLGPPGNPGPSGS 87
PG+ G PG+ G GT G KG+ G G RGL GP G GP G G G
Sbjct: 758 PGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGE 817
Query: 88 PGPKGQKGDPG 98
PGP+G G PG
Sbjct: 818 PGPRGLVGPPG 828
Score = 58.9 bits (141), Expect = 4e-09
Identities = 32/73 (43%), Positives = 42/73 (57%), Gaps = 8/73 (10%)
Query: 42 GINGFPGKDGR---DGTKGEKGEPGQ----GLRGLQGPPGKLGPPGNPGPSGSPGPKGQK 94
GI G PG+ G G G G PG+ G G +GPPG +GPPG+ GP G PGP+G
Sbjct: 993 GIVGMPGQRGERGMPGLPGPAGTPGKVGPTGATGDKGPPGPVGPPGSNGPVGEPGPEGPA 1052
Query: 95 GDPGKSPDGDSSL 107
G+ G +P D ++
Sbjct: 1053 GNDG-TPGRDGAV 1064
Score = 58.5 bits (140), Expect = 5e-09
Identities = 34/79 (43%), Positives = 39/79 (49%), Gaps = 17/79 (21%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGN---------------PGPSG 86
G+ G G G G GEKGEPG RGL GPPG G PG+ GP G
Sbjct: 798 GLPGPLGPPGPAGPTGEKGEPGP--RGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDG 855
Query: 87 SPGPKGQKGDPGKSPDGDS 105
PG KG+ G+PG+ D S
Sbjct: 856 QPGVKGEPGEPGQKGDAGS 874
Score = 58.5 bits (140), Expect = 5e-09
Identities = 31/69 (44%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ----GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGD 96
PG NG G+ G +G G G PG+ G RG +G PG G PG+ G G+PGP G GD
Sbjct: 1037 PGSNGPVGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGD 1096
Query: 97 PGKSPDGDS 105
G+ D S
Sbjct: 1097 AGQRGDPGS 1105
Score = 57.4 bits (137), Expect = 1e-08
Identities = 29/66 (43%), Positives = 38/66 (57%), Gaps = 11/66 (16%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGN------PGPSGSPGPKGQ 93
SPG GFPG G G KG +G +GL+GP G++G PG+ GP G+ GP G
Sbjct: 283 SPGARGFPGAPGLPGLKGHRGH-----KGLEGPKGEVGAPGSKGEAGPTGPMGAMGPLGP 337
Query: 94 KGDPGK 99
+G PG+
Sbjct: 338 RGMPGE 343
Score = 57.4 bits (137), Expect = 1e-08
Identities = 30/64 (46%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGKS 100
G+ G PG G +G +G G PG G RG GP G G GNPGP G GP G +G G++
Sbjct: 1149 GLQGLPGPPGPNGEQGSAGIPGPFGPRGPPGPVGPSGKEGNPGPLGPIGPPGVRGSVGEA 1208
Query: 101 -PDG 103
P+G
Sbjct: 1209 GPEG 1212
Score = 57.0 bits (136), Expect = 1e-08
Identities = 29/61 (47%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQ----GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDP 97
G+ G G G G GE G+PG G RG +GPPGK G G PG +G+PG G G P
Sbjct: 225 GLQGQQGGAGPTGPPGEPGDPGPMGPIGSRGPEGPPGKPGEDGEPGRNGNPGEVGFAGSP 284
Query: 98 G 98
G
Sbjct: 285 G 285
Score = 57.0 bits (136), Expect = 1e-08
Identities = 28/59 (47%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
PG G G G G +G++G+ G +G GLQG PG GP G G +G PGP G +G PG
Sbjct: 1121 PGPQGPRGDKGDHGDRGDRGQKGHRGFTGLQGLPGPPGPNGEQGSAGIPGPFGPRGPPG 1179
Score = 56.6 bits (135), Expect = 2e-08
Identities = 31/66 (46%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
SPG +G PG G G+ G +G G QG+RG G PG G G GP G PGP G +G G
Sbjct: 436 SPGTSGPPGSAGPPGSPGPQGSTGPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIG 495
Query: 99 KSPDGD 104
P G+
Sbjct: 496 --PPGE 499
Score = 56.6 bits (135), Expect = 2e-08
Identities = 28/60 (46%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGK 99
PG+ G PG GR G +G G PG G +G G G+ GP G PGP+G+ G +G G PG+
Sbjct: 941 PGLRGDPGSHGRVGDRGPAGPPGGPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQ 1000
Score = 56.2 bits (134), Expect = 3e-08
Identities = 29/66 (43%), Positives = 38/66 (57%), Gaps = 6/66 (9%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG--- 98
G G PG+ GR G +G G+ +G G+ G PG +GP G PG SG PG G KG+ G
Sbjct: 336 GPRGMPGERGRLGPQGAPGQ--RGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTG 393
Query: 99 -KSPDG 103
+ P+G
Sbjct: 394 ARGPEG 399
Score = 55.8 bits (133), Expect = 3e-08
Identities = 35/79 (44%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
Query: 27 DAQKTCPAVIACSSPGINGFPGKDGRDGTKGEKGEPG----QGLRGLQGPPGKLGPPGNP 82
DA P +A SPG +G G G G +G +G PG G G GPPG G PG
Sbjct: 871 DAGSPGPQGLA-GSPGPHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPA 929
Query: 83 GPSGSP---GPKGQKGDPG 98
GP G P GP G +GDPG
Sbjct: 930 GPLGEPGKEGPPGLRGDPG 948
Score = 55.8 bits (133), Expect = 3e-08
Identities = 30/68 (44%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG----QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGD 96
PG G PG+DG+ G G G G +G+ G+ G G+ G PG PGP+G+PG G G
Sbjct: 965 PGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKVGPTGA 1024
Query: 97 PG-KSPDG 103
G K P G
Sbjct: 1025 TGDKGPPG 1032
Score = 55.5 bits (132), Expect = 4e-08
Identities = 28/59 (47%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
PG G PG G G G +G PG GL G +G G+ GP G+ GP GS G G+ G+PG
Sbjct: 509 PGTVGPPGPVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPG 567
Score = 55.5 bits (132), Expect = 4e-08
Identities = 33/70 (47%), Positives = 39/70 (55%), Gaps = 8/70 (11%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGP---PGKLGPPGNPGP---SGSPGPKGQK 94
G+ G PG G G++GE G G G G QGP PG G PG PG +GSPGP+G
Sbjct: 822 GLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLA 881
Query: 95 GDPG-KSPDG 103
G PG P+G
Sbjct: 882 GSPGPHGPNG 891
Score = 55.1 bits (131), Expect = 6e-08
Identities = 31/69 (44%), Positives = 35/69 (50%), Gaps = 10/69 (14%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ----GLRGLQGPPGKLGPPGNPG------PSGSPGP 90
PG+ G G G +G KGE G PG G G G G LGP G PG P G+PG
Sbjct: 296 PGLKGHRGHKGLEGPKGEVGAPGSKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQ 355
Query: 91 KGQKGDPGK 99
+G G PGK
Sbjct: 356 RGAHGMPGK 364
Score = 55.1 bits (131), Expect = 6e-08
Identities = 27/55 (49%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 45 GFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
G PGK+G G +G+ G G+ G RG GPPG G G+PG G PGP G G G
Sbjct: 933 GEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGGPGDKGDPGEDGQPGPDGPPGPAG 987
Score = 54.7 bits (130), Expect = 7e-08
Identities = 31/69 (44%), Positives = 37/69 (53%), Gaps = 7/69 (10%)
Query: 32 CPAVIACSSPGINGFPGKDGRDGTKGEKGEPG--QGLRGLQGPPGKLGPPGNPGPSGSPG 89
CP G F GR G KG+KGEPG + G++G PG GPPG+ GP G G
Sbjct: 93 CPVCSQTPGGGNTNF----GR-GRKGQKGEPGLVPVVTGIRGRPGPAGPPGSQGPRGERG 147
Query: 90 PKGQKGDPG 98
PKG+ G G
Sbjct: 148 PKGRPGPRG 156
Score = 54.7 bits (130), Expect = 7e-08
Identities = 29/66 (43%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPGQ-------GLRGLQGPPGKLGPPGNPGPSGSPGPKG 92
S GI G PG G G KG G+PG+ G+ G +G PGK G G GP G PG G
Sbjct: 604 SIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGLAG 663
Query: 93 QKGDPG 98
++G+ G
Sbjct: 664 ERGEQG 669
Score = 54.7 bits (130), Expect = 7e-08
Identities = 30/65 (46%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGP------PGNPGPSGSPGPKGQ 93
PG G PGK G G G+KG PG G G GP G+ GP G PG G+ G +G
Sbjct: 1010 PGPAGTPGKVGPTGATGDKGPPGPVGPPGSNGPVGEPGPEGPAGNDGTPGRDGAVGERGD 1069
Query: 94 KGDPG 98
+GDPG
Sbjct: 1070 RGDPG 1074
Score = 53.5 bits (127), Expect = 2e-07
Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGKS 100
G+ G PG G G +GE+G PG+ +G PG G PG G +G GP G KG PG S
Sbjct: 696 GVPGDPGAVGPLGPRGERGNPGE-----RGEPGITGLPGEKGMAGGHGPDGPKGSPGPS 749
Score = 53.5 bits (127), Expect = 2e-07
Identities = 29/60 (48%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGK 99
PG NG G G G G +G PG G G +G PG LGP G PG GS G G +G PG+
Sbjct: 1157 PGPNGEQGSAGIPGPFGPRGPPGPVGPSGKEGNPGPLGPIGPPGVRGSVGEAGPEGPPGE 1216
Score = 53.1 bits (126), Expect = 2e-07
Identities = 33/71 (46%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGP---PGNPGPSGSPGPKGQKGD 96
PG GF G G G GE G+PG QG+ G G G LGP GNPG G PG G G+
Sbjct: 671 PGPTGFQGLPGPPGPPGEGGKPGDQGVPGDPGAVGPLGPRGERGNPGERGEPGITGLPGE 730
Query: 97 PGKS----PDG 103
G + PDG
Sbjct: 731 KGMAGGHGPDG 741
Score = 52.8 bits (125), Expect = 3e-07
Identities = 32/75 (42%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGK 99
S G G PGK G DG G G PG+ G G PG G PG PG G G +G KG G
Sbjct: 253 SRGPEGPPGKPGEDGEPGRNGNPGEV--GFAGSPGARGFPGAPGLPGLKGHRGHKGLEG- 309
Query: 100 SPDGDSSLAASERKA 114
P G+ S+ +A
Sbjct: 310 -PKGEVGAPGSKGEA 323
Score = 52.8 bits (125), Expect = 3e-07
Identities = 27/52 (51%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKG 92
PG G GK+G G G G PG +RG G G GPPG PGP G PGP G
Sbjct: 1178 PGPVGPSGKEGNPGPLGPIGPPG--VRGSVGEAGPEGPPGEPGPPGPPGPPG 1227
Score = 52.4 bits (124), Expect = 4e-07
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGK 99
PG G G G G +G++G G G G G PG +GP G+ GP G PG G+ G+PG+
Sbjct: 212 PGSVGPVGPRGPQGLQGQQGGAGPTGPPGEPGDPGPMGPIGSRGPEGPPGKPGEDGEPGR 271
Query: 100 SPD-GDSSLAAS 110
+ + G+ A S
Sbjct: 272 NGNPGEVGFAGS 283
Score = 52.0 bits (123), Expect = 5e-07
Identities = 31/73 (42%), Positives = 36/73 (49%), Gaps = 10/73 (13%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPGQ----GLRGLQGPPGKL------GPPGNPGPSGSPG 89
S G G PG+ G G G++G PG+ G G GPPG GPPG G G PG
Sbjct: 622 SSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPG 681
Query: 90 PKGQKGDPGKSPD 102
P G G+ GK D
Sbjct: 682 PPGPPGEGGKPGD 694
Score = 51.6 bits (122), Expect = 6e-07
Identities = 33/80 (41%), Positives = 39/80 (48%), Gaps = 18/80 (22%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG----QGLRGLQGPPGKLGPPGNPGPSGS--------- 87
PG G G G G GE+GEPG G +G+ G G GP G+PGPSG+
Sbjct: 701 PGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGL 760
Query: 88 ---PGPKGQKGDPGKSPDGD 104
PG +G G PG P GD
Sbjct: 761 QGMPGERGIAGTPG--PKGD 778
Score = 50.4 bits (119), Expect = 1e-06
Identities = 30/71 (42%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
+PG +G PG G G +G+ G G G +G G PGK G GN G G G G+ G+ G
Sbjct: 592 APGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVG 651
Query: 99 KS-PDGDSSLA 108
S P G LA
Sbjct: 652 PSGPVGPPGLA 662
Score = 50.1 bits (118), Expect = 2e-06
Identities = 27/66 (40%), Positives = 33/66 (50%), Gaps = 7/66 (10%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPGQ-------GLRGLQGPPGKLGPPGNPGPSGSPGPKG 92
S G G PG G G G++G+PG G G +G PG GP G+ G G G +G
Sbjct: 1081 SQGAPGTPGPVGAPGDAGQRGDPGSRGPIGPPGRAGKRGLPGPQGPRGDKGDHGDRGDRG 1140
Query: 93 QKGDPG 98
QKG G
Sbjct: 1141 QKGHRG 1146
Score = 43.1 bits (100), Expect = 2e-04
Identities = 35/119 (29%), Positives = 40/119 (33%), Gaps = 57/119 (47%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG------------------------------------- 63
PG G G DG G G+ G PG
Sbjct: 152 PGPRGPQGIDGEPGVPGQPGAPGPPGHPSHPGPDGLSRPFSAQMAGLDEKSGLGSQVGLM 211
Query: 64 ------------QGLRGLQGPPGKLGPPGNP------GPSGSPGPKGQKGDPGKSPDGD 104
QGL+G QG G GPPG P GP GS GP+G G PG+ DG+
Sbjct: 212 PGSVGPVGPRGPQGLQGQQGGAGPTGPPGEPGDPGPMGPIGSRGPEGPPGKPGE--DGE 268
>gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens]
Length = 2944
Score = 69.7 bits (169), Expect = 2e-12
Identities = 36/71 (50%), Positives = 40/71 (56%), Gaps = 7/71 (9%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ-------GLRGLQGPPGKLGPPGNPGPSGSPGPKGQ 93
PG G PG+ G G KGE G PGQ GL G +G PG GPPG GP G PGP+G
Sbjct: 1331 PGPRGDPGERGPRGPKGEPGAPGQVIGGEGPGLPGRKGDPGPSGPPGPRGPLGDPGPRGP 1390
Query: 94 KGDPGKSPDGD 104
G PG + GD
Sbjct: 1391 PGLPGTAMKGD 1401
Score = 68.6 bits (166), Expect = 5e-12
Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 37 ACSSPGINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKG 95
+ ++ G GFPG DGR G+ G G PG G GL+G PG GP G+PG G GPKG+ G
Sbjct: 1291 SATAKGERGFPGADGRPGSPGRAGNPGTPGAPGLKGSPGLPGPRGDPGERGPRGPKGEPG 1350
Query: 96 DPGKSPDGD 104
PG+ G+
Sbjct: 1351 APGQVIGGE 1359
Score = 67.0 bits (162), Expect = 1e-11
Identities = 32/62 (51%), Positives = 35/62 (56%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGKS 100
PG+ G PG G G K EPG GL G QGPPG G G PG +G GPKG +G PG
Sbjct: 2078 PGLPGTPGPPGPPGPKVSVDEPGPGLSGEQGPPGLKGAKGEPGSNGDQGPKGDRGVPGIK 2137
Query: 101 PD 102
D
Sbjct: 2138 GD 2139
Score = 67.0 bits (162), Expect = 1e-11
Identities = 37/69 (53%), Positives = 44/69 (63%), Gaps = 13/69 (18%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGK------LGPPGNP---GPSGSPG 89
+PG+ GFPG+ G +GE G+PG G RGL GPPG+ LGPPG P GP G+ G
Sbjct: 2399 APGVVGFPGQTG---PRGEMGQPGPSGERGLAGPPGREGIPGPLGPPGPPGSVGPPGASG 2455
Query: 90 PKGQKGDPG 98
KG KGDPG
Sbjct: 2456 LKGDKGDPG 2464
Score = 66.2 bits (160), Expect = 2e-11
Identities = 32/60 (53%), Positives = 37/60 (61%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGK 99
+PG+ G G G G KGE GE G RGL GP G +G PG PGPSG GP+G G PG+
Sbjct: 2190 APGLAGPAGPQGPSGLKGEPGETGPPGRGLTGPTGAVGLPGPPGPSGLVGPQGSPGLPGQ 2249
Score = 65.5 bits (158), Expect = 4e-11
Identities = 33/66 (50%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 37 ACSSPGINGFPGKDGRDGTKGEKGEPG----QGLRGLQGPPGKLGPPGNPGPSGSPGPKG 92
A G GFPG G G KGE+G PG +GL G+ G PG GP G PGP+G G KG
Sbjct: 1475 AIGPKGDRGFPGPLGEAGEKGERGPPGPAGSRGLPGVAGRPGAKGPEGPPGPTGRQGEKG 1534
Query: 93 QKGDPG 98
+ G PG
Sbjct: 1535 EPGRPG 1540
Score = 62.4 bits (150), Expect = 4e-10
Identities = 34/72 (47%), Positives = 39/72 (54%), Gaps = 8/72 (11%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ-------GLRGLQGPPGKLGPPGNPGPSGSPGPKGQ 93
PG G G+DG G KG++G PG G RGL+G PG GP G G G PG G+
Sbjct: 1624 PGPVGPRGRDGEVGEKGDEGPPGDPGLPGKAGERGLRGAPGVRGPVGEKGDQGDPGEDGR 1683
Query: 94 KGDPGKS-PDGD 104
G PG S P GD
Sbjct: 1684 NGSPGSSGPKGD 1695
Score = 62.4 bits (150), Expect = 4e-10
Identities = 34/99 (34%), Positives = 47/99 (47%), Gaps = 18/99 (18%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPG----------QGLRGLQGPPGKL--------GPPGN 81
+PGI GFPG G DG+ G G PG QG +G +GPPG+ G PG
Sbjct: 2705 TPGIGGFPGPSGNDGSAGPPGPPGSVGPRGPEGLQGQKGERGPPGERVVGAPGVPGAPGE 2764
Query: 82 PGPSGSPGPKGQKGDPGKSPDGDSSLAASERKALQTEMA 120
G G PGP G +G+ G++ + + R+ + A
Sbjct: 2765 RGEQGRPGPAGPRGEKGEAALTEDDIRGFVRQEMSQHCA 2803
Score = 62.0 bits (149), Expect = 5e-10
Identities = 35/78 (44%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 36 IACSSPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKG 95
++ PG G G+ G G KG KGEPG G QGP G G PG G G PGP+GQ G
Sbjct: 2094 VSVDEPG-PGLSGEQGPPGLKGAKGEPGSN--GDQGPKGDRGVPGIKGDRGEPGPRGQDG 2150
Query: 96 DPGKSPDGDSSLAASERK 113
+PG G+ +A E K
Sbjct: 2151 NPGL--PGERGMAGPEGK 2166
Score = 61.6 bits (148), Expect = 6e-10
Identities = 34/73 (46%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Query: 41 PGINGFPGKDGR-----DGTKGEKGEPGQGLRGLQ-GPPGKLGPPGNPGPSGSPGPKGQK 94
PG G PG G G +GE+G PG G G+ G PG G PG+PGP G GP G+K
Sbjct: 1385 PGPRGPPGLPGTAMKGDKGDRGERGPPGPGEGGIAPGEPGLPGLPGSPGPQGPVGPPGKK 1444
Query: 95 GDPGKSPDGDSSL 107
G+ G S DG L
Sbjct: 1445 GEKGDSEDGAPGL 1457
Score = 61.6 bits (148), Expect = 6e-10
Identities = 33/70 (47%), Positives = 39/70 (55%), Gaps = 8/70 (11%)
Query: 41 PGINGFPGKDG------RDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQK 94
PGI G PG+ G R G +GE+GE G+ RG QG G G PG PGP G PGPK
Sbjct: 2039 PGIPGLPGRAGGVGEAGRPGERGERGEKGE--RGEQGRDGPPGLPGTPGPPGPPGPKVSV 2096
Query: 95 GDPGKSPDGD 104
+PG G+
Sbjct: 2097 DEPGPGLSGE 2106
Score = 61.2 bits (147), Expect = 8e-10
Identities = 32/79 (40%), Positives = 39/79 (49%), Gaps = 9/79 (11%)
Query: 33 PAVIACSSPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKG 92
P ++ PG G PG G G G G PG GPPG+ G PG PGP G GP+G
Sbjct: 1577 PGLVLPGDPGPKGDPGDRGPIGLTGRAGPPGDS-----GPPGEKGDPGRPGPPGPVGPRG 1631
Query: 93 QKGDPG----KSPDGDSSL 107
+ G+ G + P GD L
Sbjct: 1632 RDGEVGEKGDEGPPGDPGL 1650
Score = 61.2 bits (147), Expect = 8e-10
Identities = 38/94 (40%), Positives = 49/94 (52%), Gaps = 21/94 (22%)
Query: 42 GINGFPGKDGRDGTKGEKGEPG----QGLRGLQGP-----------PGKLGPPGNPGPSG 86
G +G G++GRDG KGE+G PG QG GL GP PG GP G+ G +G
Sbjct: 1860 GDSGASGREGRDGPKGERGAPGILGPQGPPGLPGPVGPPGQGFPGVPGGTGPKGDRGETG 1919
Query: 87 S------PGPKGQKGDPGKSPDGDSSLAASERKA 114
S PG +G +G+PG P+ D L + KA
Sbjct: 1920 SKGEQGLPGERGLRGEPGSVPNVDRLLETAGIKA 1953
Score = 60.8 bits (146), Expect = 1e-09
Identities = 36/83 (43%), Positives = 43/83 (51%), Gaps = 16/83 (19%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGL------------RGLQGPPGKLGPPGNPGPSGSP 88
PG G G G G KG+KG+PG GL RG G PG+ GP G GP GS
Sbjct: 2442 PGPPGSVGPPGASGLKGDKGDPGVGLPGPRGERGEPGIRGEDGRPGQEGPRGLTGPPGSR 2501
Query: 89 GPKGQKGDPG----KSPDGDSSL 107
G +G+KGD G K GDS++
Sbjct: 2502 GERGEKGDVGSAGLKGDKGDSAV 2524
Score = 60.5 bits (145), Expect = 1e-09
Identities = 32/69 (46%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Query: 36 IACSSPGINGFPGKDGRDGT------KGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPG 89
IA PG+ G PG G G KGEKG+ G GL G PG G G GP G+ G
Sbjct: 1418 IAPGEPGLPGLPGSPGPQGPVGPPGKKGEKGDSEDGAPGLPGQPGSPGEQGPRGPPGAIG 1477
Query: 90 PKGQKGDPG 98
PKG +G PG
Sbjct: 1478 PKGDRGFPG 1486
Score = 60.1 bits (144), Expect = 2e-09
Identities = 37/94 (39%), Positives = 47/94 (50%), Gaps = 23/94 (24%)
Query: 41 PGINGFPGKDGR---------DGTKGEKGEPGQ----GLRGLQGPPGKLGPPG---NPGP 84
PG++G G DG+ +G G+ G+PG+ GLRG QG PG GPPG PG
Sbjct: 1775 PGLDGRSGLDGKPGAAGPSGPNGAAGKAGDPGRDGLPGLRGEQGLPGPSGPPGLPGKPGE 1834
Query: 85 SGSPGPKGQKGDPG-------KSPDGDSSLAASE 111
G PG G+ G+PG K GDS + E
Sbjct: 1835 DGKPGLNGKNGEPGDPGEDGRKGEKGDSGASGRE 1868
Score = 58.9 bits (141), Expect = 4e-09
Identities = 32/75 (42%), Positives = 41/75 (54%), Gaps = 16/75 (21%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQ-------GLRGLQGPPGKLGPPGNPGPSGSP------ 88
G G PG G+DG G GE G GL+G +GPPG +G G+PGP G+P
Sbjct: 2138 GDRGEPGPRGQDGNPGLPGERGMAGPEGKPGLQGPRGPPGPVGGHGDPGPPGAPGLAGPA 2197
Query: 89 ---GPKGQKGDPGKS 100
GP G KG+PG++
Sbjct: 2198 GPQGPSGLKGEPGET 2212
Score = 58.5 bits (140), Expect = 5e-09
Identities = 30/77 (38%), Positives = 42/77 (54%), Gaps = 9/77 (11%)
Query: 33 PAVIACSSPGIN--GFPGKDGRDGTKGEKGEPG-------QGLRGLQGPPGKLGPPGNPG 83
P + + PG G PG G++G +G KG+PG +G+ G +GPPG G PG G
Sbjct: 1705 PGRLVDTGPGAREKGEPGDRGQEGPRGPKGDPGLPGAPGERGIEGFRGPPGPQGDPGVRG 1764
Query: 84 PSGSPGPKGQKGDPGKS 100
P+G G +G G G+S
Sbjct: 1765 PAGEKGDRGPPGLDGRS 1781
Score = 58.5 bits (140), Expect = 5e-09
Identities = 38/86 (44%), Positives = 43/86 (50%), Gaps = 23/86 (26%)
Query: 41 PGINGFPGKD--GRDGTKGEKGEPG------------QGLRGLQGP------PGKLGPPG 80
PG G PG+ G G KGEKG PG +G RGL GP G+ G PG
Sbjct: 2292 PGPTGAPGQAVVGLPGAKGEKGAPGGLAGDLVGEPGAKGDRGLPGPRGEKGEAGRAGEPG 2351
Query: 81 NP---GPSGSPGPKGQKGDPGKSPDG 103
+P G G+PGPKG KGDPG G
Sbjct: 2352 DPGEDGQKGAPGPKGFKGDPGVGVPG 2377
Score = 58.5 bits (140), Expect = 5e-09
Identities = 32/64 (50%), Positives = 37/64 (57%), Gaps = 7/64 (10%)
Query: 42 GINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGK------LGPPGNPGPSGSPGPKGQK 94
G NG PG G G G+KG G GLRGL GP G+ G PG+PG G PG +G+K
Sbjct: 2554 GDNGDPGDKGSKGEPGDKGSAGLPGLRGLLGPQGQPGAAGIPGDPGSPGKDGVPGIRGEK 2613
Query: 95 GDPG 98
GD G
Sbjct: 2614 GDVG 2617
Score = 58.5 bits (140), Expect = 5e-09
Identities = 33/80 (41%), Positives = 40/80 (50%), Gaps = 16/80 (20%)
Query: 37 ACSSPGINGFPGKDGRDGTKGEKGEPGQ----------------GLRGLQGPPGKLGPPG 80
A PG G PGKDG G +GEKG+ G GL G +G G+ GPPG
Sbjct: 2591 AAGIPGDPGSPGKDGVPGIRGEKGDVGFMGPRGLKGERGVKGACGLDGEKGDKGEAGPPG 2650
Query: 81 NPGPSGSPGPKGQKGDPGKS 100
PG +G G G+ G PG+S
Sbjct: 2651 RPGLAGHKGEMGEPGVPGQS 2670
Score = 58.2 bits (139), Expect = 7e-09
Identities = 35/80 (43%), Positives = 41/80 (51%), Gaps = 14/80 (17%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPP------GKLGPPGNPGP------SGSP 88
PG G G+ G G KG KG+PG G+ G GPP G LG PG PG G
Sbjct: 2350 PGDPGEDGQKGAPGPKGFKGDPGVGVPGSPGPPGPPGVKGDLGLPGLPGAPGVVGFPGQT 2409
Query: 89 GPKGQKGDPGKSPDGDSSLA 108
GP+G+ G PG P G+ LA
Sbjct: 2410 GPRGEMGQPG--PSGERGLA 2427
Score = 58.2 bits (139), Expect = 7e-09
Identities = 31/64 (48%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Query: 42 GINGFPGKDGRDGTKGEKGEPG-------QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQK 94
G G PG+ G G KGE GEPG G GL GP G G G PGP G G KG++
Sbjct: 2644 GEAGPPGRPGLAGHKGEMGEPGVPGQSGAPGKEGLIGPKGDRGFDGQPGPKGDQGEKGER 2703
Query: 95 GDPG 98
G PG
Sbjct: 2704 GTPG 2707
Score = 57.0 bits (136), Expect = 1e-08
Identities = 30/68 (44%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG-K 99
PG+ G PG+DG+ G G+ GEPG G G G+ G G G G GPKG++G PG
Sbjct: 1826 PGLPGKPGEDGKPGLNGKNGEPGDP--GEDGRKGEKGDSGASGREGRDGPKGERGAPGIL 1883
Query: 100 SPDGDSSL 107
P G L
Sbjct: 1884 GPQGPPGL 1891
Score = 56.2 bits (134), Expect = 3e-08
Identities = 34/87 (39%), Positives = 42/87 (48%), Gaps = 21/87 (24%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNP----------------- 82
PG+ G G+ G +G +G KG+ G G++G +G PG G GNP
Sbjct: 2110 PGLKGAKGEPGSNGDQGPKGDRGVPGIKGDRGEPGPRGQDGNPGLPGERGMAGPEGKPGL 2169
Query: 83 -GPSGSPGPKGQKGDPGKSPDGDSSLA 108
GP G PGP G GDPG P G LA
Sbjct: 2170 QGPRGPPGPVGGHGDPG--PPGAPGLA 2194
Score = 56.2 bits (134), Expect = 3e-08
Identities = 33/75 (44%), Positives = 41/75 (54%), Gaps = 14/75 (18%)
Query: 40 SPGINGFPGKDGRDGTKGEK---GEPGQ------GLRGLQGPPGKL-----GPPGNPGPS 85
SPG+ G PG G G KGE G PGQ G +G +G PG L G PG G
Sbjct: 2273 SPGVPGSPGLPGPVGPKGEPGPTGAPGQAVVGLPGAKGEKGAPGGLAGDLVGEPGAKGDR 2332
Query: 86 GSPGPKGQKGDPGKS 100
G PGP+G+KG+ G++
Sbjct: 2333 GLPGPRGEKGEAGRA 2347
Score = 55.8 bits (133), Expect = 3e-08
Identities = 32/83 (38%), Positives = 41/83 (49%), Gaps = 19/83 (22%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKG--------- 92
G+ G PG G G KG++G+PG+ G G PG GP G+ G G PGP G
Sbjct: 1658 GLRGAPGVRGPVGEKGDQGDPGED--GRNGSPGSSGPKGDRGEPGPPGPPGRLVDTGPGA 1715
Query: 93 -QKGDPG-------KSPDGDSSL 107
+KG+PG + P GD L
Sbjct: 1716 REKGEPGDRGQEGPRGPKGDPGL 1738
Score = 54.7 bits (130), Expect = 7e-08
Identities = 28/67 (41%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPG----QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGD 96
PG G G +G+ G +G +G PG G G G PG GP G GPSG G G+ G
Sbjct: 2155 PGERGMAGPEGKPGLQGPRGPPGPVGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGP 2214
Query: 97 PGKSPDG 103
PG+ G
Sbjct: 2215 PGRGLTG 2221
Score = 54.3 bits (129), Expect = 1e-07
Identities = 36/103 (34%), Positives = 47/103 (45%), Gaps = 14/103 (13%)
Query: 5 PSLPLLLLSMVAASYSETVTCEDAQKTCPAVIACSSPGINGFPGKDGRDGTKGEKGEPGQ 64
PSL + + A + T + + CP + C G G PG+ G G G G+PG
Sbjct: 1220 PSLDQAVSGLATALCQASFTTQPRPEPCP--VYCPK-GQKGEPGEMGLRGQVGPPGDPG- 1275
Query: 65 GLRGLQGPPGKLGPPGN---------PGPSGSPGPKGQKGDPG 98
L G G PG GPPG+ PG G PG G+ G+PG
Sbjct: 1276 -LPGRTGAPGPQGPPGSATAKGERGFPGADGRPGSPGRAGNPG 1317
Score = 54.3 bits (129), Expect = 1e-07
Identities = 28/62 (45%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ----GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGD 96
PG +G G G G G+ GE G+ G G G G G PG PG G PGP G KG+
Sbjct: 2232 PGPSGLVGPQGSPGLPGQVGETGKPGAPGRDGASGKDGDRGSPGVPGSPGLPGPVGPKGE 2291
Query: 97 PG 98
PG
Sbjct: 2292 PG 2293
Score = 54.3 bits (129), Expect = 1e-07
Identities = 32/73 (43%), Positives = 38/73 (52%), Gaps = 12/73 (16%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ----------GLRGLQGPPGKLGPPGNPGPSGSPGP 90
PG +G PGK+G G KG++G GQ G RG G G GP GN G +G PGP
Sbjct: 2667 PGQSGAPGKEGLIGPKGDRGFDGQPGPKGDQGEKGERGTPGIGGFPGPSGNDGSAGPPGP 2726
Query: 91 KGQKGDPGKSPDG 103
G G G P+G
Sbjct: 2727 PGSVGPRG--PEG 2737
Score = 53.9 bits (128), Expect = 1e-07
Identities = 28/59 (47%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
PG G PGK G G +G G G G +G QG PG+ G G+PG SG G +G+ G PG
Sbjct: 1645 PGDPGLPGKAGERGLRGAPGVRGPVGEKGDQGDPGEDGRNGSPGSSGPKGDRGEPGPPG 1703
Score = 53.9 bits (128), Expect = 1e-07
Identities = 40/102 (39%), Positives = 44/102 (43%), Gaps = 20/102 (19%)
Query: 26 EDAQKTCPAVIACSSP---GINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGP--- 78
ED QK P G+ G PG G G KG+ G PG G G+ G PG+ GP
Sbjct: 2355 EDGQKGAPGPKGFKGDPGVGVPGSPGPPGPPGVKGDLGLPGLPGAPGVVGFPGQTGPRGE 2414
Query: 79 PGNPGPSGS------------PGPKGQKGDPGK-SPDGDSSL 107
G PGPSG PGP G G PG P G S L
Sbjct: 2415 MGQPGPSGERGLAGPPGREGIPGPLGPPGPPGSVGPPGASGL 2456
Score = 53.1 bits (126), Expect = 2e-07
Identities = 35/79 (44%), Positives = 41/79 (51%), Gaps = 12/79 (15%)
Query: 33 PAVI--ACSSP----GINGFPGKDGRDGTKGEKGEPGQGLRGLQGP---PGKLGP---PG 80
PAV+ A + P G G G G G +GE+G PG L G GP PG GP G
Sbjct: 1542 PAVVGPAVAGPKGEKGDVGPAGPRGATGVQGERGPPGLVLPGDPGPKGDPGDRGPIGLTG 1601
Query: 81 NPGPSGSPGPKGQKGDPGK 99
GP G GP G+KGDPG+
Sbjct: 1602 RAGPPGDSGPPGEKGDPGR 1620
Score = 53.1 bits (126), Expect = 2e-07
Identities = 28/59 (47%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 42 GINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGK 99
G G PG G G +G GE G +G GL G G G PG GPSG G G+ GDPG+
Sbjct: 1749 GFRGPPGPQGDPGVRGPAGEKGDRGPPGLDGRSGLDGKPGAAGPSGPNGAAGKAGDPGR 1807
Score = 52.8 bits (125), Expect = 3e-07
Identities = 28/66 (42%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQGL---RGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
G G PG GR G KGE G PG + GP G+ G G GP G+ G +G++G PG
Sbjct: 1519 GPEGPPGPTGRQGEKGEPGRPGDPAVVGPAVAGPKGEKGDVGPAGPRGATGVQGERGPPG 1578
Query: 99 KSPDGD 104
GD
Sbjct: 1579 LVLPGD 1584
Score = 52.8 bits (125), Expect = 3e-07
Identities = 32/80 (40%), Positives = 36/80 (45%), Gaps = 19/80 (23%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQ-----------------GLRGLQGPPGKLGPPGNPGP 84
G NG PG G G +GE G PG G RG +GP G G PG PG
Sbjct: 1682 GRNGSPGSSGPKGDRGEPGPPGPPGRLVDTGPGAREKGEPGDRGQEGPRGPKGDPGLPGA 1741
Query: 85 SGSPGPKGQKGDPGKSPDGD 104
G G +G +G PG P GD
Sbjct: 1742 PGERGIEGFRGPPG--PQGD 1759
Score = 52.8 bits (125), Expect = 3e-07
Identities = 31/74 (41%), Positives = 36/74 (48%), Gaps = 15/74 (20%)
Query: 40 SPGINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGKLGPPGNPGPSGSPGP-------- 90
SPG+ G G+ G+ G G G G+ G RG G PG G PG GP G PGP
Sbjct: 2243 SPGLPGQVGETGKPGAPGRDGASGKDGDRGSPGVPGSPGLPGPVGPKGEPGPTGAPGQAV 2302
Query: 91 ------KGQKGDPG 98
KG+KG PG
Sbjct: 2303 VGLPGAKGEKGAPG 2316
Score = 52.4 bits (124), Expect = 4e-07
Identities = 31/59 (52%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 42 GINGFPGKDGRDGTKGEKGEPG-QGLRGLQGPPG-KLGPPGNPGPSGSPGPKGQKGDPG 98
G G PGK+G G GE+G G +G G QGPPG LG G PGPSG G G+ G PG
Sbjct: 1985 GEQGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGPSGLAGEPGKPGIPG 2043
Score = 50.4 bits (119), Expect = 1e-06
Identities = 28/67 (41%), Positives = 33/67 (49%), Gaps = 8/67 (11%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ--------GLRGLQGPPGKLGPPGNPGPSGSPGPKG 92
PG G G G G KG++G+PG G RG GP G G PG PG G PG G
Sbjct: 1990 PGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGPSGLAGEPGKPGIPGLPGRAG 2049
Query: 93 QKGDPGK 99
G+ G+
Sbjct: 2050 GVGEAGR 2056
Score = 50.1 bits (118), Expect = 2e-06
Identities = 26/52 (50%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 48 GKDGRDGTKGEKGEPG-QGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG 98
G G G KG+ GE G +GL G +GP G G PG+ G G PG KG G PG
Sbjct: 2527 GPPGPRGAKGDMGERGPRGLDGDKGPRGDNGDPGDKGSKGEPGDKGSAGLPG 2578
Score = 49.7 bits (117), Expect = 2e-06
Identities = 30/69 (43%), Positives = 35/69 (50%), Gaps = 9/69 (13%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNP------GPSGSPGPKGQKG 95
G G G DG G +G+ G+PG +G +G PG G G P GP G PG G G
Sbjct: 2539 GERGPRGLDGDKGPRGDNGDPGD--KGSKGEPGDKGSAGLPGLRGLLGPQGQPGAAGIPG 2596
Query: 96 DPGKSPDGD 104
DPG SP D
Sbjct: 2597 DPG-SPGKD 2604
Score = 49.3 bits (116), Expect = 3e-06
Identities = 34/87 (39%), Positives = 40/87 (45%), Gaps = 22/87 (25%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ----GLRG--LQGPPGKLGPPGNPGPS--------- 85
PG G PG G G +G G+PG GL G ++G G G G PGP
Sbjct: 1364 PGRKGDPGPSGPPGPRGPLGDPGPRGPPGLPGTAMKGDKGDRGERGPPGPGEGGIAPGEP 1423
Query: 86 ------GSPGPKGQKGDPGKSPD-GDS 105
GSPGP+G G PGK + GDS
Sbjct: 1424 GLPGLPGSPGPQGPVGPPGKKGEKGDS 1450
Score = 49.3 bits (116), Expect = 3e-06
Identities = 31/66 (46%), Positives = 34/66 (51%), Gaps = 13/66 (19%)
Query: 47 PGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGKSPDGDSS 106
P + R G KG+ GE QGPPGK GP G PG G KG +GDPG P G
Sbjct: 1972 PVPERRRGPKGDSGE--------QGPPGKEGPIGFPGERGL---KGDRGDPG--PQGPPG 2018
Query: 107 LAASER 112
LA ER
Sbjct: 2019 LALGER 2024
Score = 47.8 bits (112), Expect = 9e-06
Identities = 32/84 (38%), Positives = 37/84 (44%), Gaps = 16/84 (19%)
Query: 29 QKTCPAVIACSSPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGS- 87
+K P +A G G G G G +GEKGE G+ G G PG+ G G PGP G
Sbjct: 2311 EKGAPGGLAGDLVGEPGAKGDRGLPGPRGEKGEAGRA--GEPGDPGEDGQKGAPGPKGFK 2368
Query: 88 -------------PGPKGQKGDPG 98
PGP G KGD G
Sbjct: 2369 GDPGVGVPGSPGPPGPPGVKGDLG 2392
Score = 47.4 bits (111), Expect = 1e-05
Identities = 35/99 (35%), Positives = 39/99 (39%), Gaps = 35/99 (35%)
Query: 42 GINGFPGKDGRDGTKGEKGEPGQ-GLRGLQGPPGK------------------------- 75
G+ G G+ G G +GE G PGQ G RGL GPPG
Sbjct: 2466 GLPGPRGERGEPGIRGEDGRPGQEGPRGLTGPPGSRGERGEKGDVGSAGLKGDKGDSAVI 2525
Query: 76 LGPPG---------NPGPSGSPGPKGQKGDPGKSPDGDS 105
LGPPG GP G G KG +GD G D S
Sbjct: 2526 LGPPGPRGAKGDMGERGPRGLDGDKGPRGDNGDPGDKGS 2564
Score = 46.6 bits (109), Expect = 2e-05
Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 41 PGINGFPGKDGRDGTKGEKGEPGQ----GLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGD 96
PG+ G G+ G G G+ G PG+ G +G +G G+ GP G+ G G G G G
Sbjct: 2652 PGLAGHKGEMGEPGVPGQSGAPGKEGLIGPKGDRGFDGQPGPKGDQGEKGERGTPGIGGF 2711
Query: 97 PGKSPDGDSS 106
PG S + S+
Sbjct: 2712 PGPSGNDGSA 2721
Score = 42.4 bits (98), Expect = 4e-04
Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 6/65 (9%)
Query: 40 SPGINGFPGKD----GRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKG 95
S G+ G G G G +G KG+ G+ RG +G G GP G+ G G G KG+ G
Sbjct: 2512 SAGLKGDKGDSAVILGPPGPRGAKGDMGE--RGPRGLDGDKGPRGDNGDPGDKGSKGEPG 2569
Query: 96 DPGKS 100
D G +
Sbjct: 2570 DKGSA 2574
Score = 40.4 bits (93), Expect = 0.001
Identities = 19/46 (41%), Positives = 25/46 (54%)
Query: 67 RGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGKSPDGDSSLAASER 112
+G +G PG++G G GP G PG G+ G PG S+ A ER
Sbjct: 1253 KGQKGEPGEMGLRGQVGPPGDPGLPGRTGAPGPQGPPGSATAKGER 1298
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.134 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,524,173
Number of Sequences: 37866
Number of extensions: 783664
Number of successful extensions: 33299
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 312
Number of HSP's successfully gapped in prelim test: 325
Number of HSP's that attempted gapping in prelim test: 4355
Number of HSP's gapped (non-prelim): 6829
length of query: 248
length of database: 18,247,518
effective HSP length: 100
effective length of query: 148
effective length of database: 14,460,918
effective search space: 2140215864
effective search space used: 2140215864
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.