Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: HSD17B3 Sequence: fasta or formatted (310aa) NCBI GI: 4557649
Description:

estradiol 17 beta-dehydrogenase 3

Referenced in:

Alcohol and Aldehyde Dehydrogenases
Steroid Hormones

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.4         26           1
 C cysteine            2.6          8           1
 D aspartate           2.3          7           2
 E glutamate           5.8         18           2
 F phenylalanine       4.5         14           2
 G glycine             6.1         19           2
 H histidine           1.9          6           1
 I isoleucine          8.1         25           2
 K lysine              7.1         22           1
 L leucine            13.5         42           3
 M methionine          2.3          7           1
 N asparagine          3.9         12           2
 P proline             2.6          8           1
 Q glutamine           2.9          9           1
 R arginine            3.2         10           1
 S serine              6.5         20           2
 T threonine           6.1         19           2
 V valine              7.1         22           2
 W tryptophan          1.3          4           1
 Y tyrosine            3.9         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   estradiol 17 beta-dehydrogenase 3 
HSD17B12              0.320   hydroxysteroid (17-beta) dehydrogenase 12 
HSDL1                 0.233   hydroxysteroid dehydrogenase like 1 isoform a [Homo...
HSDL1                 0.122   hydroxysteroid dehydrogenase like 1 isoform b [Homo...
DHRS7                 0.083   dehydrogenase/reductase (SDR family) member 7 
HSD17B11              0.075   estradiol 17-beta-dehydrogenase 11 
CBR4                  0.075   carbonic reductase 4 
DHRS4                 0.071   peroxisomal short-chain alcohol dehydrogenase 
RDH10                 0.071   retinol dehydrogenase 10 
KDSR                  0.065   3-ketodihydrosphingosine reductase precursor 
HSD17B13              0.065   hydroxysteroid (17-beta) dehydrogenase 13 isoform A...
PECR                  0.063   peroxisomal trans-2-enoyl-CoA reductase 
HPGD                  0.061   hydroxyprostaglandin dehydrogenase 15-(NAD) isoform ...
HSD17B4               0.060   hydroxysteroid (17-beta) dehydrogenase 4 
RDH8                  0.060   retinol dehydrogenase 8 (all-trans) 
RDH11                 0.060   retinol dehydrogenase 11 
HSD11B1               0.058   11-beta-hydroxysteroid dehydrogenase 1 
HSD11B1               0.058   11-beta-hydroxysteroid dehydrogenase 1 
RDH13                 0.058   retinol dehydrogenase 13 isoform 1 
HSD17B6               0.058   hydroxysteroid (17-beta) dehydrogenase 6 
HPGD                  0.056   hydroxyprostaglandin dehydrogenase 15-(NAD) isoform...
DHRS2                 0.056   dehydrogenase/reductase member 2 isoform 2 
DHRS7B                0.056   dehydrogenase/reductase (SDR family) member 7B [Homo...
DECR1                 0.056   2,4-dienoyl CoA reductase 1 precursor 
DHRS11                0.054   short-chain dehydrogenase/reductase 
DHRS2                 0.054   dehydrogenase/reductase member 2 isoform 1 
HSD11B1L              0.053   short-chain dehydrogenase/reductase 10 isoform e [Ho...
HSD11B1L              0.053   short-chain dehydrogenase/reductase 10 isoform b [Ho...
RDH16                 0.051   retinol dehydrogenase 16 
SDR16C5               0.049   epidermal retinal dehydrogenase 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press