Guide to the Human Genome
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Name: HSD11B1L Sequence: fasta or formatted (286aa) NCBI GI: 38424085
Description:

short-chain dehydrogenase/reductase 10 isoform b

Referenced in:

Alcohol and Aldehyde Dehydrogenases

Other entries for this name:
alt prot [315aa] short-chain dehydrogenase/reductase 10 isoform e
alt prot [205aa] short-chain dehydrogenase/reductase 10 isoform a
alt prot [199aa] short-chain dehydrogenase/reductase 10 isoform c
alt prot [181aa] short-chain dehydrogenase/reductase 10 isoform f
alt prot [152aa] short-chain dehydrogenase/reductase 10 isoform d
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            14.7         42           4
 C cysteine            1.0          3           1
 D aspartate           3.8         11           2
 E glutamate           2.8          8           2
 F phenylalanine       4.5         13           2
 G glycine             8.4         24           2
 H histidine           1.4          4           1
 I isoleucine          1.7          5           1
 K lysine              3.1          9           1
 L leucine            13.6         39           3
 M methionine          1.4          4           1
 N asparagine          2.4          7           1
 P proline             4.9         14           1
 Q glutamine           2.8          8           1
 R arginine            8.0         23           2
 S serine              5.9         17           2
 T threonine           4.9         14           1
 V valine              9.4         27           3
 W tryptophan          1.7          5           1
 Y tyrosine            3.1          9           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   short-chain dehydrogenase/reductase 10 isoform b [Ho... 
HSD11B1L              0.765   short-chain dehydrogenase/reductase 10 isoform e [Ho...
HSD11B1L              0.678   short-chain dehydrogenase/reductase 10 isoform c [Ho...
HSD11B1L              0.617   short-chain dehydrogenase/reductase 10 isoform a [Ho...
HSD11B1L              0.506   short-chain dehydrogenase/reductase 10 isoform d [Ho...
HSD11B1               0.361   11-beta-hydroxysteroid dehydrogenase 1 
HSD11B1               0.361   11-beta-hydroxysteroid dehydrogenase 1 
HSD11B1L              0.270   short-chain dehydrogenase/reductase 10 isoform f [Ho...
DHRS7                 0.120   dehydrogenase/reductase (SDR family) member 7 
DHRS7B                0.093   dehydrogenase/reductase (SDR family) member 7B [Homo...
HSD17B11              0.093   estradiol 17-beta-dehydrogenase 11 
HSD17B13              0.087   hydroxysteroid (17-beta) dehydrogenase 13 isoform A...
DHRS7C                0.087   dehydrogenase/reductase (SDR family) member 7C [Hom...
DHRS2                 0.083   dehydrogenase/reductase member 2 isoform 2 
DHRS2                 0.083   dehydrogenase/reductase member 2 isoform 1 
KDSR                  0.074   3-ketodihydrosphingosine reductase precursor 
RDH8                  0.072   retinol dehydrogenase 8 (all-trans) 
HSD17B14              0.070   dehydrogenase/reductase (SDR family) member 10 [Homo...
SDR9C7                0.069   short chain dehydrogenase/reductase family 9C, membe...
SDR16C5               0.063   epidermal retinal dehydrogenase 2 
DHRS13                0.063   dehydrogenase/reductase (SDR family) member 13 [Hom...
HSD17B6               0.061   hydroxysteroid (17-beta) dehydrogenase 6 
RDH5                  0.059   retinol dehydrogenase 5 (11-cis and 9-cis) 
BDH1                  0.059   3-hydroxybutyrate dehydrogenase, type 1 precursor [H...
BDH1                  0.059   3-hydroxybutyrate dehydrogenase, type 1 precursor [H...
BDH1                  0.059   3-hydroxybutyrate dehydrogenase, type 1 precursor [H...
HSD17B3               0.057   estradiol 17 beta-dehydrogenase 3 
RDH16                 0.057   retinol dehydrogenase 16 
HSD17B2               0.057   hydroxysteroid (17-beta) dehydrogenase 2 
DHRS9                 0.054   NADP-dependent retinol dehydrogenase/reductase [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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