Guide to the Human Genome
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Name: HSDL1 Sequence: fasta or formatted (330aa) NCBI GI: 226371731
Description:

hydroxysteroid dehydrogenase like 1 isoform a

Referenced in:

Alcohol and Aldehyde Dehydrogenases
Fatty Acid Synthesis
Steroid Hormones

Other entries for this name:
alt prot [275aa] hydroxysteroid dehydrogenase like 1 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.6         35           3
 C cysteine            2.1          7           2
 D aspartate           3.9         13           1
 E glutamate           4.2         14           2
 F phenylalanine       3.9         13           1
 G glycine             5.2         17           1
 H histidine           2.1          7           2
 I isoleucine          7.9         26           2
 K lysine              5.2         17           2
 L leucine             9.4         31           2
 M methionine          1.8          6           1
 N asparagine          3.0         10           2
 P proline             3.6         12           1
 Q glutamine           2.7          9           1
 R arginine            5.2         17           1
 S serine              9.1         30           2
 T threonine           4.2         14           2
 V valine              7.6         25           2
 W tryptophan          2.4          8           1
 Y tyrosine            5.8         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hydroxysteroid dehydrogenase like 1 isoform a [Homo... 
HSDL1                 0.736   hydroxysteroid dehydrogenase like 1 isoform b [Homo...
HSD17B12              0.314   hydroxysteroid (17-beta) dehydrogenase 12 
HSD17B3               0.214   estradiol 17 beta-dehydrogenase 3 
DHRS4                 0.078   peroxisomal short-chain alcohol dehydrogenase 
HSD17B13              0.075   hydroxysteroid (17-beta) dehydrogenase 13 isoform A...
DHRS2                 0.073   dehydrogenase/reductase member 2 isoform 2 
HSD17B11              0.070   estradiol 17-beta-dehydrogenase 11 
DHRS2                 0.070   dehydrogenase/reductase member 2 isoform 1 
DHRS7B                0.070   dehydrogenase/reductase (SDR family) member 7B [Homo...
DHRS4L2               0.064   dehydrogenase/reductase (SDR family) member 4 like ...
DHRS7                 0.061   dehydrogenase/reductase (SDR family) member 7 
RDH11                 0.058   retinol dehydrogenase 11 
CBR4                  0.058   carbonic reductase 4 
RDH13                 0.053   retinol dehydrogenase 13 isoform 1 
RDH16                 0.053   retinol dehydrogenase 16 
BDH1                  0.053   3-hydroxybutyrate dehydrogenase, type 1 precursor [H...
BDH1                  0.053   3-hydroxybutyrate dehydrogenase, type 1 precursor [H...
BDH1                  0.053   3-hydroxybutyrate dehydrogenase, type 1 precursor [H...
DHRS3                 0.052   dehydrogenase/reductase (SDR family) member 3 
SDR16C5               0.052   epidermal retinal dehydrogenase 2 
KDSR                  0.050   3-ketodihydrosphingosine reductase precursor 
SDR9C7                0.050   short chain dehydrogenase/reductase family 9C, membe...
DHRS4L1               0.050   dehydrogenase/reductase (SDR family) member 4 like ...
DCXR                  0.050   dicarbonyl/L-xylulose reductase 
BDH2                  0.048   3-hydroxybutyrate dehydrogenase, type 2 
HSD11B1               0.048   11-beta-hydroxysteroid dehydrogenase 1 
HSD11B1               0.048   11-beta-hydroxysteroid dehydrogenase 1 
HSD17B6               0.047   hydroxysteroid (17-beta) dehydrogenase 6 
DHRSX                 0.047   dehydrogenase/reductase (SDR family) X-linked [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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