Guide to the Human Genome
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Name: CBR4 Sequence: fasta or formatted (237aa) NCBI GI: 40254992
Description:

carbonic reductase 4

Referenced in:

Alcohol and Aldehyde Dehydrogenases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.7         23           3
 C cysteine            1.3          3           1
 D aspartate           4.2         10           1
 E glutamate           5.1         12           2
 F phenylalanine       3.4          8           1
 G glycine            11.8         28           2
 H histidine           3.4          8           1
 I isoleucine          4.6         11           1
 K lysine              6.8         16           2
 L leucine            11.0         26           2
 M methionine          3.0          7           1
 N asparagine          4.2         10           1
 P proline             1.3          3           1
 Q glutamine           3.4          8           3
 R arginine            5.5         13           1
 S serine              5.1         12           1
 T threonine           4.2         10           1
 V valine             11.0         26           2
 W tryptophan          0.0          0           0
 Y tyrosine            1.3          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   carbonic reductase 4 
HSD17B8               0.237   estradiol 17 beta-dehydrogenase 8 
HSD17B10              0.212   hydroxysteroid (17-beta) dehydrogenase 10 isoform 1 [...
DHRS4                 0.199   peroxisomal short-chain alcohol dehydrogenase 
HPGD                  0.199   hydroxyprostaglandin dehydrogenase 15-(NAD) isoform ...
HSD17B14              0.192   dehydrogenase/reductase (SDR family) member 10 [Homo...
PECR                  0.187   peroxisomal trans-2-enoyl-CoA reductase 
HSD17B10              0.176   hydroxysteroid (17-beta) dehydrogenase 10 isoform 2 ...
DHRS2                 0.169   dehydrogenase/reductase member 2 isoform 2 
DHRS4L1               0.162   dehydrogenase/reductase (SDR family) member 4 like ...
BDH2                  0.162   3-hydroxybutyrate dehydrogenase, type 2 
DECR2                 0.153   2,4-dienoyl CoA reductase 2 
HPGD                  0.151   hydroxyprostaglandin dehydrogenase 15-(NAD) isoform...
DHRS2                 0.148   dehydrogenase/reductase member 2 isoform 1 
DECR1                 0.137   2,4-dienoyl CoA reductase 1 precursor 
RDH10                 0.132   retinol dehydrogenase 10 
HSD17B13              0.130   hydroxysteroid (17-beta) dehydrogenase 13 isoform A...
KDSR                  0.128   3-ketodihydrosphingosine reductase precursor 
HSD17B4               0.126   hydroxysteroid (17-beta) dehydrogenase 4 
DHRS11                0.126   short-chain dehydrogenase/reductase 
DCXR                  0.123   dicarbonyl/L-xylulose reductase 
SDR16C5               0.121   epidermal retinal dehydrogenase 2 
DHRS7B                0.121   dehydrogenase/reductase (SDR family) member 7B [Homo...
DHRS4L2               0.114   dehydrogenase/reductase (SDR family) member 4 like ...
DHRS3                 0.114   dehydrogenase/reductase (SDR family) member 3 
RDH8                  0.114   retinol dehydrogenase 8 (all-trans) 
HSD17B11              0.103   estradiol 17-beta-dehydrogenase 11 
HSD17B6               0.103   hydroxysteroid (17-beta) dehydrogenase 6 
HSD17B3               0.100   estradiol 17 beta-dehydrogenase 3 
DHRS7                 0.100   dehydrogenase/reductase (SDR family) member 7 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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