Guide to the Human Genome
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Name: HSD11B1L Sequence: fasta or formatted (315aa) NCBI GI: 38348362
Description:

short-chain dehydrogenase/reductase 10 isoform e

Referenced in:

Alcohol and Aldehyde Dehydrogenases

Other entries for this name:
alt prot [205aa] short-chain dehydrogenase/reductase 10 isoform a
alt prot [199aa] short-chain dehydrogenase/reductase 10 isoform c
alt prot [181aa] short-chain dehydrogenase/reductase 10 isoform f
alt prot [152aa] short-chain dehydrogenase/reductase 10 isoform d
alt prot [286aa] short-chain dehydrogenase/reductase 10 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.5         33           2
 C cysteine            1.0          3           1
 D aspartate           4.1         13           2
 E glutamate           3.8         12           2
 F phenylalanine       3.8         12           2
 G glycine             7.9         25           2
 H histidine           2.5          8           1
 I isoleucine          1.0          3           1
 K lysine              3.8         12           1
 L leucine            12.7         40           3
 M methionine          1.9          6           1
 N asparagine          2.2          7           1
 P proline             6.7         21           2
 Q glutamine           4.1         13           1
 R arginine            7.6         24           2
 S serine              7.6         24           2
 T threonine           6.0         19           1
 V valine              8.9         28           3
 W tryptophan          1.3          4           1
 Y tyrosine            2.5          8           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   short-chain dehydrogenase/reductase 10 isoform e [Ho... 
HSD11B1L              0.684   short-chain dehydrogenase/reductase 10 isoform b [Ho...
HSD11B1L              0.558   short-chain dehydrogenase/reductase 10 isoform f [Ho...
HSD11B1L              0.397   short-chain dehydrogenase/reductase 10 isoform c [Ho...
HSD11B1L              0.341   short-chain dehydrogenase/reductase 10 isoform a [Ho...
HSD11B1               0.280   11-beta-hydroxysteroid dehydrogenase 1 
HSD11B1               0.280   11-beta-hydroxysteroid dehydrogenase 1 
HSD11B1L              0.242   short-chain dehydrogenase/reductase 10 isoform d [Ho...
DHRS7                 0.108   dehydrogenase/reductase (SDR family) member 7 
DHRS7B                0.083   dehydrogenase/reductase (SDR family) member 7B [Homo...
HSD17B11              0.081   estradiol 17-beta-dehydrogenase 11 
DHRS7C                0.078   dehydrogenase/reductase (SDR family) member 7C [Hom...
HSD17B13              0.076   hydroxysteroid (17-beta) dehydrogenase 13 isoform A...
DHRS2                 0.075   dehydrogenase/reductase member 2 isoform 2 
DHRS2                 0.075   dehydrogenase/reductase member 2 isoform 1 
KDSR                  0.066   3-ketodihydrosphingosine reductase precursor 
RDH8                  0.065   retinol dehydrogenase 8 (all-trans) 
HSD17B14              0.063   dehydrogenase/reductase (SDR family) member 10 [Homo...
SDR9C7                0.061   short chain dehydrogenase/reductase family 9C, membe...
SDR16C5               0.056   epidermal retinal dehydrogenase 2 
HSD17B6               0.055   hydroxysteroid (17-beta) dehydrogenase 6 
RDH5                  0.053   retinol dehydrogenase 5 (11-cis and 9-cis) 
BDH1                  0.053   3-hydroxybutyrate dehydrogenase, type 1 precursor [H...
BDH1                  0.053   3-hydroxybutyrate dehydrogenase, type 1 precursor [H...
BDH1                  0.053   3-hydroxybutyrate dehydrogenase, type 1 precursor [H...
HSD17B3               0.051   estradiol 17 beta-dehydrogenase 3 
RDH16                 0.051   retinol dehydrogenase 16 
HSD17B2               0.051   hydroxysteroid (17-beta) dehydrogenase 2 
DHRS9                 0.048   NADP-dependent retinol dehydrogenase/reductase [Homo...
DHRS13                0.048   dehydrogenase/reductase (SDR family) member 13 [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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