Guide to the Human Genome
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Name: RDH10 Sequence: fasta or formatted (341aa) NCBI GI: 25282469
Description:

retinol dehydrogenase 10

Referenced in:

Alcohol and Aldehyde Dehydrogenases
Stem Cells and Early Development

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.4         32           3
 C cysteine            3.5         12           1
 D aspartate           3.2         11           1
 E glutamate           7.3         25           3
 F phenylalanine       5.3         18           2
 G glycine             6.5         22           1
 H histidine           2.9         10           2
 I isoleucine          5.0         17           1
 K lysine              5.3         18           1
 L leucine             9.7         33           2
 M methionine          3.5         12           2
 N asparagine          4.1         14           3
 P proline             3.8         13           2
 Q glutamine           2.3          8           1
 R arginine            5.3         18           3
 S serine              3.5         12           2
 T threonine           5.9         20           2
 V valine              9.7         33           2
 W tryptophan          1.2          4           1
 Y tyrosine            2.6          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   retinol dehydrogenase 10 
SDR16C5               0.359   epidermal retinal dehydrogenase 2 
SDR16C6               0.319   short chain dehydrogenase/reductase family 16C, mem...
HSD17B13              0.280   hydroxysteroid (17-beta) dehydrogenase 13 isoform A...
HSD17B11              0.280   estradiol 17-beta-dehydrogenase 11 
DHRS3                 0.237   dehydrogenase/reductase (SDR family) member 3 
HSD17B13              0.178   hydroxysteroid (17-beta) dehydrogenase 13 isoform B...
HSD17B4               0.088   hydroxysteroid (17-beta) dehydrogenase 4 
CBR4                  0.087   carbonic reductase 4 
DHRS7                 0.076   dehydrogenase/reductase (SDR family) member 7 
DHRS7B                0.075   dehydrogenase/reductase (SDR family) member 7B [Homo...
KDSR                  0.072   3-ketodihydrosphingosine reductase precursor 
HPGD                  0.070   hydroxyprostaglandin dehydrogenase 15-(NAD) isoform ...
BDH2                  0.064   3-hydroxybutyrate dehydrogenase, type 2 
HSD17B8               0.063   estradiol 17 beta-dehydrogenase 8 
HSD17B3               0.063   estradiol 17 beta-dehydrogenase 3 
HSDL2                 0.063   hydroxysteroid dehydrogenase like 2 
HPGD                  0.060   hydroxyprostaglandin dehydrogenase 15-(NAD) isoform...
RDH5                  0.052   retinol dehydrogenase 5 (11-cis and 9-cis) 
RDH14                 0.051   retinol dehydrogenase 14 (all-trans and 9-cis) [Homo...
RDH13                 0.051   retinol dehydrogenase 13 isoform 1 
DHRS4                 0.051   peroxisomal short-chain alcohol dehydrogenase 
HSD17B6               0.049   hydroxysteroid (17-beta) dehydrogenase 6 
HSD17B1               0.046   hydroxysteroid (17-beta) dehydrogenase 1 
SDR9C7                0.046   short chain dehydrogenase/reductase family 9C, membe...
DHRS4L2               0.045   dehydrogenase/reductase (SDR family) member 4 like ...
RDH16                 0.045   retinol dehydrogenase 16 
RDH8                  0.045   retinol dehydrogenase 8 (all-trans) 
DHRS11                0.045   short-chain dehydrogenase/reductase 
DHRS9                 0.043   NADP-dependent retinol dehydrogenase/reductase [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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