Guide to the Human Genome
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Search of human proteins with 4557595

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4557595 forkhead box F2 [Homo sapiens]
         (444 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4557595 forkhead box F2 [Homo sapiens]                             929   0.0  
gi|110735445 forkhead box F1 [Homo sapiens]                           372   e-103
gi|4758392 forkhead box D1 [Homo sapiens]                             194   1e-49
gi|134142824 forkhead box D2 [Homo sapiens]                           181   9e-46
gi|6912372 forkhead box D3 [Homo sapiens]                             169   5e-42
gi|21618325 forkhead box E1 [Homo sapiens]                            158   8e-39
gi|12751477 forkhead box L2 [Homo sapiens]                            157   1e-38
gi|22779860 forkhead box L1 [Homo sapiens]                            155   9e-38
gi|145309320 forkhead box Q1 [Homo sapiens]                           154   1e-37
gi|119395716 forkhead box C1 [Homo sapiens]                           153   3e-37
gi|18959276 forkhead box D4-like 1 [Homo sapiens]                     148   9e-36
gi|208431824 forkhead box I3 [Homo sapiens]                           148   9e-36
gi|195947376 forkhead box I2 [Homo sapiens]                           148   1e-35
gi|24497501 forkhead box A1 [Homo sapiens]                            147   2e-35
gi|146262007 forkhead box D4-like 6 [Homo sapiens]                    147   2e-35
gi|157042770 forkhead box D4-like 3 [Homo sapiens]                    146   4e-35
gi|149944560 forkhead box D4-like 2 [Homo sapiens]                    145   6e-35
gi|187423902 forkhead box D4-like 5 [Homo sapiens]                    145   6e-35
gi|76880472 forkhead box D4-like 4 [Homo sapiens]                     145   6e-35
gi|4885237 forkhead box C2 [Homo sapiens]                             145   9e-35
gi|24497506 forkhead box A3 [Homo sapiens]                            143   3e-34
gi|75677594 forkhead box D4 [Homo sapiens]                            143   4e-34
gi|24497504 forkhead box A2 isoform 2 [Homo sapiens]                  142   8e-34
gi|194394143 forkhead box A2 isoform 1 [Homo sapiens]                 142   8e-34
gi|32307177 forkhead box G1 [Homo sapiens]                            140   2e-33
gi|11386197 forkhead box E3 [Homo sapiens]                            140   2e-33
gi|28973785 forkhead box S1 [Homo sapiens]                            139   4e-33
gi|105554437 forkhead box B1 [Homo sapiens]                           135   1e-31
gi|61966923 forkhead box B2 [Homo sapiens]                            133   4e-31
gi|21618327 forkhead box I1 isoform a [Homo sapiens]                  127   2e-29

>gi|4557595 forkhead box F2 [Homo sapiens]
          Length = 444

 Score =  929 bits (2400), Expect = 0.0
 Identities = 444/444 (100%), Positives = 444/444 (100%)

Query: 1   MTTEGGPPPAPLRRACSPVPGALQAALMSPPPAAAAAAAAAPETTSSSSSSSSASCASSS 60
           MTTEGGPPPAPLRRACSPVPGALQAALMSPPPAAAAAAAAAPETTSSSSSSSSASCASSS
Sbjct: 1   MTTEGGPPPAPLRRACSPVPGALQAALMSPPPAAAAAAAAAPETTSSSSSSSSASCASSS 60

Query: 61  SSSNSASAPSAACKSAGGGGAGAGSGGAKKASSGLRRPEKPPYSYIALIVMAIQSSPSKR 120
           SSSNSASAPSAACKSAGGGGAGAGSGGAKKASSGLRRPEKPPYSYIALIVMAIQSSPSKR
Sbjct: 61  SSSNSASAPSAACKSAGGGGAGAGSGGAKKASSGLRRPEKPPYSYIALIVMAIQSSPSKR 120

Query: 121 LTLSEIYQFLQARFPFFRGAYQGWKNSVRHNLSLNECFIKLPKGLGRPGKGHYWTIDPAS 180
           LTLSEIYQFLQARFPFFRGAYQGWKNSVRHNLSLNECFIKLPKGLGRPGKGHYWTIDPAS
Sbjct: 121 LTLSEIYQFLQARFPFFRGAYQGWKNSVRHNLSLNECFIKLPKGLGRPGKGHYWTIDPAS 180

Query: 181 EFMFEEGSFRRRPRGFRRKCQALKPMYHRVVSGLGFGASLLPQGFDFQAPPSAPLGCHSQ 240
           EFMFEEGSFRRRPRGFRRKCQALKPMYHRVVSGLGFGASLLPQGFDFQAPPSAPLGCHSQ
Sbjct: 181 EFMFEEGSFRRRPRGFRRKCQALKPMYHRVVSGLGFGASLLPQGFDFQAPPSAPLGCHSQ 240

Query: 241 GGYGGLDMMPAGYDAGAGAPSHAHPHHHHHHHVPHMSPNPGSTYMASCPVPAGPGGVGAA 300
           GGYGGLDMMPAGYDAGAGAPSHAHPHHHHHHHVPHMSPNPGSTYMASCPVPAGPGGVGAA
Sbjct: 241 GGYGGLDMMPAGYDAGAGAPSHAHPHHHHHHHVPHMSPNPGSTYMASCPVPAGPGGVGAA 300

Query: 301 GGGGGGDYGPDSSSSPVPSSPAMASAIECHSPYTSPAAHWSSPGASPYLKQPPALTPSSN 360
           GGGGGGDYGPDSSSSPVPSSPAMASAIECHSPYTSPAAHWSSPGASPYLKQPPALTPSSN
Sbjct: 301 GGGGGGDYGPDSSSSPVPSSPAMASAIECHSPYTSPAAHWSSPGASPYLKQPPALTPSSN 360

Query: 361 PAASAGLHSSMSSYSLEQSYLHQNAREDLSVGLPRYQHHSTPVCDRKDFVLNFNGISSFH 420
           PAASAGLHSSMSSYSLEQSYLHQNAREDLSVGLPRYQHHSTPVCDRKDFVLNFNGISSFH
Sbjct: 361 PAASAGLHSSMSSYSLEQSYLHQNAREDLSVGLPRYQHHSTPVCDRKDFVLNFNGISSFH 420

Query: 421 PSASGSYYHHHHQSVCQDIKPCVM 444
           PSASGSYYHHHHQSVCQDIKPCVM
Sbjct: 421 PSASGSYYHHHHQSVCQDIKPCVM 444


>gi|110735445 forkhead box F1 [Homo sapiens]
          Length = 379

 Score =  372 bits (954), Expect = e-103
 Identities = 225/412 (54%), Positives = 262/412 (63%), Gaps = 67/412 (16%)

Query: 66  ASAPSAACKSAGGGGAGAGSGGA------------KKASSGLRRPEKPPYSYIALIVMAI 113
           +SAP       GGGG G G GGA            KK ++G+RRPEKPPYSYIALIVMAI
Sbjct: 2   SSAPEKQQPPHGGGGGGGGGGGAAMDPASSGPSKAKKTNAGIRRPEKPPYSYIALIVMAI 61

Query: 114 QSSPSKRLTLSEIYQFLQARFPFFRGAYQGWKNSVRHNLSLNECFIKLPKGLGRPGKGHY 173
           QSSP+KRLTLSEIYQFLQ+RFPFFRG+YQGWKNSVRHNLSLNECFIKLPKGLGRPGKGHY
Sbjct: 62  QSSPTKRLTLSEIYQFLQSRFPFFRGSYQGWKNSVRHNLSLNECFIKLPKGLGRPGKGHY 121

Query: 174 WTIDPASEFMFEEGSFRRRPRGFRRKCQALKPMYHRVVSGLGFGASLLPQGFDFQAPPSA 233
           WTIDPASEFMFEEGSFRRRPRGFRRKCQALKPMY  +++GLGF  + LP  + FQ   + 
Sbjct: 122 WTIDPASEFMFEEGSFRRRPRGFRRKCQALKPMY-SMMNGLGF--NHLPDTYGFQG-SAG 177

Query: 234 PLGC--HSQGGYGGLDMM----PAGYDAGAGAPSHAHPHHHHHHHVPHMSPNPGSTYMAS 287
            L C  +S    GGL MM    P   D G   PSH+         VPH+  N G +YM  
Sbjct: 178 GLSCPPNSLALEGGLGMMNGHLPGNVD-GMALPSHS---------VPHLPSNGGHSYMGG 227

Query: 288 CPVPAGPGGVGAAGGGGGGDYGPDSSSSPVPSSPAM----ASAIECHSPYTSPAAHWSSP 343
           C            GG   G+Y    SS  VP+SP +       +E H+ Y+  AA W  P
Sbjct: 228 C------------GGAAAGEYPHHDSS--VPASPLLPTGAGGVMEPHAVYSGSAAAW-PP 272

Query: 344 GAS-------PYLKQPPALTPSSNPAASAGLHSSMSSYSLEQSYLHQNAREDLS--VGLP 394
            AS        Y+KQ P L+P  NPAA+  L  S+S++SLEQ YLHQN+    +   G+P
Sbjct: 273 SASAALNSGASYIKQQP-LSP-CNPAANP-LSGSLSTHSLEQPYLHQNSHNAPAELQGIP 329

Query: 395 RYQHHSTPVCDRKDFVLNFNGI--SSFHPSASGSYYHHHHQSVCQDIKPCVM 444
           RY   S  +CDRK+FV +FN +  SS H +  GSYY  H Q   QDIKPCVM
Sbjct: 330 RYHSQSPSMCDRKEFVFSFNAMASSSMHSAGGGSYY--HQQVTYQDIKPCVM 379


>gi|4758392 forkhead box D1 [Homo sapiens]
          Length = 465

 Score =  194 bits (494), Expect = 1e-49
 Identities = 139/368 (37%), Positives = 177/368 (48%), Gaps = 44/368 (11%)

Query: 58  SSSSSSNSASAPSAACKSAGGGGAGAGSGGAKKASSGLRRP-EKPPYSYIALIVMAIQSS 116
           +  S +    AP+A    AGGGG G G+GG   A SG + P  KPPYSYIALI MAI  S
Sbjct: 83  AGGSPAPPGPAPAAGA-GAGGGGGGGGAGGGGSAGSGAKNPLVKPPYSYIALITMAILQS 141

Query: 117 PSKRLTLSEIYQFLQARFPFFRGAYQGWKNSVRHNLSLNECFIKLPKGLGRPGKGHYWTI 176
           P KRLTLSEI +F+  RFP++R  +  W+NS+RHNLSLN+CF+K+P+  G PGKG+YWT+
Sbjct: 142 PKKRLTLSEICEFISGRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTL 201

Query: 177 DPASEFMFEEGSFRRRPRGFRRK------CQALKPMYHRVVSGLGFGASLLPQGFDFQAP 230
           DP S  MF+ GSF RR + F+R+        A + +  R     G           F   
Sbjct: 202 DPESADMFDNGSFLRRRKRFKRQPLLPPNAAAAESLLLRGAGAAGGAGDPAAAAALFPPA 261

Query: 231 PSAPLGCHSQGGYG---GLDMMP-----AGYDAGAGAPSHA--HPHHHHHHHVPH-MSPN 279
           P  P   +  G YG   GL + P     A + A A A + A  HPH       PH  +  
Sbjct: 262 PPPPPHAYGYGPYGCGYGLQLPPYAPPSALFAAAAAAAAAAAFHPHSPPPPPPPHGAAAE 321

Query: 280 PGSTYMASCPVPAG-------PGGVGAAGGGG---------------GGDYGPDSSSSPV 317
              T     P P G       P     AGG G               GG  GP ++++  
Sbjct: 322 LARTAFGYRPHPLGAALPGPLPASAAKAGGPGASALARSPFSIESIIGGSLGPAAAAAAA 381

Query: 318 PSSPAMASAIECHSPYTSPAAHWSSPG--ASPYLKQPPALTPSSNPAASAGLHSSMSSYS 375
             + A A A    SP  +P A  SS G  A+     P A    S  AA+A   SS+SS S
Sbjct: 382 AQAAAAAQASPSPSPVAAPPAPGSSGGGCAAQAAVGPAAALTRSLVAAAAAAASSVSS-S 440

Query: 376 LEQSYLHQ 383
                LHQ
Sbjct: 441 AALGTLHQ 448



 Score = 35.4 bits (80), Expect = 0.10
 Identities = 37/145 (25%), Positives = 62/145 (42%), Gaps = 30/145 (20%)

Query: 7   PPPAP-------LRRACSPVPGALQAALMSPPPAAAA--------AAAAAPETTSS---- 47
           PPP P        R A    P  L AAL  P PA+AA        A A +P +  S    
Sbjct: 311 PPPPPHGAAAELARTAFGYRPHPLGAALPGPLPASAAKAGGPGASALARSPFSIESIIGG 370

Query: 48  ----SSSSSSASCASSSSSSNSASAPSAACKSAGGGGAGAGSGGAKKASSGLRRPEKPPY 103
               ++++++A+ A++++ ++ + +P AA  + G  G G  +  A   ++ L R      
Sbjct: 371 SLGPAAAAAAAAQAAAAAQASPSPSPVAAPPAPGSSGGGCAAQAAVGPAAALTRS----- 425

Query: 104 SYIALIVMAIQSSPSKRLTLSEIYQ 128
             +     A  SS S    L  ++Q
Sbjct: 426 --LVAAAAAAASSVSSSAALGTLHQ 448



 Score = 35.4 bits (80), Expect = 0.10
 Identities = 33/98 (33%), Positives = 41/98 (41%), Gaps = 19/98 (19%)

Query: 6   GPPPAPLRRACSPVPGALQAALMSPP--------PAAAAAAAAAPETTSSSSSSSSASCA 57
           GP PA   +A  P   AL  +  S          PAAAAAAAA            +A+ A
Sbjct: 340 GPLPASAAKAGGPGASALARSPFSIESIIGGSLGPAAAAAAAA-----------QAAAAA 388

Query: 58  SSSSSSNSASAPSAACKSAGGGGAGAGSGGAKKASSGL 95
            +S S +  +AP A   S GG  A A  G A   +  L
Sbjct: 389 QASPSPSPVAAPPAPGSSGGGCAAQAAVGPAAALTRSL 426



 Score = 35.0 bits (79), Expect = 0.14
 Identities = 31/95 (32%), Positives = 44/95 (46%), Gaps = 5/95 (5%)

Query: 5   GGPPPAPLRRACSPVPGALQAALMSPPPAAAAAAAAAPETTSSSSSSSSASCASSSS--- 61
           GGP  + L R+   +   +  +L     AAAAA AAA    S S S  +A  A  SS   
Sbjct: 350 GGPGASALARSPFSIESIIGGSLGPAAAAAAAAQAAAAAQASPSPSPVAAPPAPGSSGGG 409

Query: 62  -SSNSASAPSAA-CKSAGGGGAGAGSGGAKKASSG 94
            ++ +A  P+AA  +S     A A S  +  A+ G
Sbjct: 410 CAAQAAVGPAAALTRSLVAAAAAAASSVSSSAALG 444



 Score = 30.8 bits (68), Expect = 2.6
 Identities = 14/39 (35%), Positives = 18/39 (46%)

Query: 276 MSPNPGSTYMASCPVPAGPGGVGAAGGGGGGDYGPDSSS 314
           ++P  G +     P PA   G G  GGGGG   G  + S
Sbjct: 79  LAPPAGGSPAPPGPAPAAGAGAGGGGGGGGAGGGGSAGS 117



 Score = 30.4 bits (67), Expect = 3.4
 Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 11/79 (13%)

Query: 4   EGGPPPAPLRRACSPVPGALQ---AALMSPPPAAA------AAAAAAPETTSSSSSSSSA 54
           +  P P+P+  A  P PG+     AA  +  PAAA      AAAAAA  + SSS++  + 
Sbjct: 389 QASPSPSPV--AAPPAPGSSGGGCAAQAAVGPAAALTRSLVAAAAAAASSVSSSAALGTL 446

Query: 55  SCASSSSSSNSASAPSAAC 73
              ++ SS  + +A  + C
Sbjct: 447 HQGTALSSVENFTARISNC 465


>gi|134142824 forkhead box D2 [Homo sapiens]
          Length = 495

 Score =  181 bits (460), Expect = 9e-46
 Identities = 133/343 (38%), Positives = 165/343 (48%), Gaps = 31/343 (9%)

Query: 30  PPPAAAAAAAAAPETTSSSSSSSSASCASSSSSSNSASAP---SAACKSAGGGGAGAGSG 86
           PP   A A  A  E  S   S       +S  ++ +A +P   +AA + A G G G  SG
Sbjct: 58  PPAEEAEADLAEDEEESGGCSDGEPRALASRGAAAAAGSPGPGAAAARGAAGPGPGPPSG 117

Query: 87  GAKKASSGLRRPEKPPYSYIALIVMAIQSSPSKRLTLSEIYQFLQARFPFFRGAYQGWKN 146
           GA   S  +    KPPYSYIALI MAI  SP KRLTLSEI +F+  RFP++R  +  W+N
Sbjct: 118 GAATRSPLV----KPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAWQN 173

Query: 147 SVRHNLSLNECFIKLPKGLGRPGKGHYWTIDPASEFMFEEGSFRRRPRGFRRKCQALKPM 206
           S+RHNLSLN+CF+K+P+  G PGKG+YWT+DP S  MF+ GSF RR + F+R  Q L P 
Sbjct: 174 SIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKR--QPLPPP 231

Query: 207 YHRVVSGLGFGASLLPQGFDFQAPPSAPL-GCHSQGGYG-GLDMMPAGYDAGAGAPS-HA 263
           +            LL  G      P A L G  + G YG G  +    Y A    P+ H 
Sbjct: 232 HPHPHP---HPELLLRGGAAAAGDPGAFLPGFAAYGAYGYGYGLALPAYGAPPPGPAPHP 288

Query: 264 HPHHHHHHHVP-------HMSPNPGSTYMASCPVPAGPGGVGAAGGGGGGDYGPDSSSSP 316
           HPH H              +S  PG    A+ P P  P     AG G      P S S P
Sbjct: 289 HPHPHAFAFAAAAAAAPCQLSVPPG---RAAAPPPGPPTASVFAGAGSAPAPAPASGSGP 345

Query: 317 VPSS---PAMASA-IECHSPYTSPAAHWSSPGASPYLKQPPAL 355
            P     PA   A + C   +   AA  S P A      P AL
Sbjct: 346 GPGPAGLPAFLGAELGCAKAFY--AASLSPPAAGTAAGLPTAL 386



 Score = 34.3 bits (77), Expect = 0.23
 Identities = 26/92 (28%), Positives = 37/92 (40%), Gaps = 5/92 (5%)

Query: 6   GPPPAPLRRACSPVPGALQAALMSPPPAAAAAAAAAPETTSSSSSSSSASCASSSSSSNS 65
           GPP A +       P    A+   P P  A   A        + +  +AS  S  ++  +
Sbjct: 321 GPPTASVFAGAGSAPAPAPASGSGPGPGPAGLPAFLGAELGCAKAFYAASL-SPPAAGTA 379

Query: 66  ASAPSA----ACKSAGGGGAGAGSGGAKKASS 93
           A  P+A      K+  GGGAG G  GA +  S
Sbjct: 380 AGLPTALLRQGLKTDAGGGAGGGGAGAGQRPS 411



 Score = 29.6 bits (65), Expect = 5.8
 Identities = 18/74 (24%), Positives = 32/74 (43%)

Query: 21  GALQAALMSPPPAAAAAAAAAPETTSSSSSSSSASCASSSSSSNSASAPSAACKSAGGGG 80
           G    A  +PPP  A      P   + ++++++A C  S     +A+ P     ++   G
Sbjct: 271 GLALPAYGAPPPGPAPHPHPHPHAFAFAAAAAAAPCQLSVPPGRAAAPPPGPPTASVFAG 330

Query: 81  AGAGSGGAKKASSG 94
           AG+    A  + SG
Sbjct: 331 AGSAPAPAPASGSG 344


>gi|6912372 forkhead box D3 [Homo sapiens]
          Length = 478

 Score =  169 bits (428), Expect = 5e-42
 Identities = 132/392 (33%), Positives = 170/392 (43%), Gaps = 39/392 (9%)

Query: 6   GPPPAPLRRACSPVPGALQAALMSPP-------PAAAAAAAAAPETTSSSSSSSSASCAS 58
           GPP   L  A    P A       PP       P  AA A A P       +  +  C  
Sbjct: 49  GPPELRLDEADEVPPAAPHHGQPQPPHQQPLTLPKEAAGAGAGPG--GDVGAPEADGCKG 106

Query: 59  SSSSSNSASAPSAACKSAGGGGAGAGSGGAKKASSGLRRPEKPPYSYIALIVMAIQSSPS 118
                   +       S GG GAG+GS G    S       KPPYSYIALI MAI  SP 
Sbjct: 107 GVGGEEGGA-------SGGGPGAGSGSAGGLAPSKPKNSLVKPPYSYIALITMAILQSPQ 159

Query: 119 KRLTLSEIYQFLQARFPFFRGAYQGWKNSVRHNLSLNECFIKLPKGLGRPGKGHYWTIDP 178
           K+LTLS I +F+  RFP++R  +  W+NS+RHNLSLN+CF+K+P+  G PGKG+YWT+DP
Sbjct: 160 KKLTLSGICEFISNRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDP 219

Query: 179 ASEFMFEEGSFRRRPRGFRRKCQA-LKPMYHRVVSGLGFGASLLPQGFDFQAPPSAPLGC 237
            SE MF+ GSF RR + F+R  Q  L+     ++    FGA  L        P   P G 
Sbjct: 220 QSEDMFDNGSFLRRRKRFKRHQQEHLREQTALMMQ--SFGAYSLAAAAGAAGPYGRPYGL 277

Query: 238 HSQGGYGGLDMMPAGYDAGAGAPSHAHPHHHHHHHVPHMSPNPGSTYMASCPVPAGPGG- 296
           H     G     PA   A A A +  +P     + +P ++P      +    VP  P G 
Sbjct: 278 HPAAAAGAYS-HPAAAAAAAAAAALQYP-----YALPPVAP------VLPPAVPLLPSGE 325

Query: 297 VGAAGGGGGGDYGPDSSSSPVPSSPAMASAIECHSPYTSPAAHWSSPGASPYLK------ 350
           +G      G   GP           A A+A    +  T+ +   S P A P         
Sbjct: 326 LGRKAAAFGSQLGPGLQLQLNSLGAAAAAAGTAGAAGTTASLIKSEPSARPSFSIENIIG 385

Query: 351 -QPPALTPSSNPAASAGLHSSMSSYSLEQSYL 381
             P A   S+  A  AG        S  QS+L
Sbjct: 386 GGPAAPGGSAVGAGVAGGTGGSGGGSTAQSFL 417



 Score = 42.4 bits (98), Expect = 9e-04
 Identities = 38/106 (35%), Positives = 44/106 (41%), Gaps = 14/106 (13%)

Query: 7   PPPAPL-------RRAC---SPVPGALQAALMSPPPAAAAAAAAAPETTSSSSSSSSASC 56
           PP  PL       R+A    S +   LQ  L S   AAAAA  A    T++S   S  S 
Sbjct: 315 PPAVPLLPSGELGRKAAAFGSQLGPGLQLQLNSLGAAAAAAGTAGAAGTTASLIKSEPSA 374

Query: 57  ASSSSSSN----SASAPSAACKSAGGGGAGAGSGGAKKASSGLRRP 98
             S S  N      +AP  +   AG  G   GSGG   A S LR P
Sbjct: 375 RPSFSIENIIGGGPAAPGGSAVGAGVAGGTGGSGGGSTAQSFLRPP 420



 Score = 28.9 bits (63), Expect = 9.8
 Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 11/83 (13%)

Query: 291 PAGPGG----VGAAGGGGGGDYGPDSSSSPVPSSPAMASAI-ECHSPYTSPAAHWSSPGA 345
           PA PGG     G AGG GG   G  + S   P     ++A+   H P +      ++   
Sbjct: 388 PAAPGGSAVGAGVAGGTGGSGGGSTAQSFLRPPGTVQSAALMATHQPLSLSR---TTATI 444

Query: 346 SPYLKQPPA---LTPSSNPAASA 365
           +P L  P +   L P+++ AA+A
Sbjct: 445 APILSVPLSGQFLQPAASAAAAA 467


>gi|21618325 forkhead box E1 [Homo sapiens]
          Length = 373

 Score =  158 bits (400), Expect = 8e-39
 Identities = 110/331 (33%), Positives = 156/331 (47%), Gaps = 56/331 (16%)

Query: 70  SAACKSAGGGGAGAGSGGAKKASSGLRRP---EKPPYSYIALIVMAIQSSPSKRLTLSEI 126
           +AA     G   G G+GG ++     +RP    KPPYSYIALI MAI  +P +RLTL  I
Sbjct: 25  TAAGAGVPGEATGRGAGGRRR-----KRPLQRGKPPYSYIALIAMAIAHAPERRLTLGGI 79

Query: 127 YQFLQARFPFFRGAYQGWKNSVRHNLSLNECFIKLPKGLGRPGKGHYWTIDPASEFMFEE 186
           Y+F+  RFPF+R   + W+NS+RHNL+LN+CF+K+P+  GRPGKG+YW +DP +E MFE 
Sbjct: 80  YKFITERFPFYRDNPKKWQNSIRHNLTLNDCFLKIPREAGRPGKGNYWALDPNAEDMFES 139

Query: 187 GSFRRRPRGFRRKCQALKPMYHR-------VVSGLGFGASLLPQGFDFQAPPSAPLGCHS 239
           GSF RR + F+R   +  P Y           +     A++ P       PP        
Sbjct: 140 GSFLRRRKRFKRSDLSTYPAYMHDAAAAAAAAAAAAAAAAIFPGAVPAARPP-------- 191

Query: 240 QGGYGGLDMMPAGYDAGAGAPSHAHPHHHHHHHVPHMSPNPGSTY---------MASCPV 290
                     P    AG   PS A P   ++   P  SP P   +             P 
Sbjct: 192 ---------YPGAVYAGYAPPSLAAPPPVYY---PAASPGPCRVFGLVPERPLSPELGPA 239

Query: 291 PAGPGGVGAAGGGGG----GDYGPDSSSSPVPSSPAMASAIECHSPYTSP-AAHWSSPGA 345
           P+GPGG  A    G       Y P   +   P++P+  +A      Y  P  A+    G+
Sbjct: 240 PSGPGGSCAFASAGAPATTTGYQPAGCTGARPANPSAYAA-----AYAGPDGAYPQGAGS 294

Query: 346 SPYLKQPPALTPSSNPA--ASAGLHSSMSSY 374
           + +        P+S PA  +S G+ +++  Y
Sbjct: 295 AIFAAAGRLAGPASPPAGGSSGGVETTVDFY 325



 Score = 30.4 bits (67), Expect = 3.4
 Identities = 29/96 (30%), Positives = 39/96 (40%), Gaps = 14/96 (14%)

Query: 8   PPAPLRRACSPVPGALQAALMSPPPAAAAAAAAAPETTSSSSSSSSASCASSSSSSNSAS 67
           P  PL     P P         P  + A A+A AP TT   +    A C  +  ++ SA 
Sbjct: 228 PERPLSPELGPAPSG-------PGGSCAFASAGAPATT---TGYQPAGCTGARPANPSA- 276

Query: 68  APSAACKSAGGGGAGAGSGGAKKASSG-LRRPEKPP 102
              AA  +   G    G+G A  A++G L  P  PP
Sbjct: 277 --YAAAYAGPDGAYPQGAGSAIFAAAGRLAGPASPP 310


>gi|12751477 forkhead box L2 [Homo sapiens]
          Length = 376

 Score =  157 bits (398), Expect = 1e-38
 Identities = 128/365 (35%), Positives = 162/365 (44%), Gaps = 62/365 (16%)

Query: 30  PPPAAAAAAAAAPETTSSSSSSSSASCASSSSSSNSASAPSAACKSAGGGGAGAGSGGAK 89
           P P  AA A  APET                    +   P     S G GG G G    +
Sbjct: 6   PEPEDAAGALLAPET------------------GRTVKEPEGPPPSPGKGGGGGGGTAPE 47

Query: 90  KASSGLRRPEKPPYSYIALIVMAIQSSPSKRLTLSEIYQFLQARFPFFRGAYQGWKNSVR 149
           K        +KPPYSY+ALI MAI+ S  KRLTLS IYQ++ A+FPF+    +GW+NS+R
Sbjct: 48  KPDPA----QKPPYSYVALIAMAIRESAEKRLTLSGIYQYIIAKFPFYEKNKKGWQNSIR 103

Query: 150 HNLSLNECFIKLPKGLGRPGKGHYWTIDPASEFMFEEGSFRRRPRGFRRKCQALKPMYHR 209
           HNLSLNECFIK+P+  G   KG+YWT+DPA E MFE+G++RRR    RR  +  +P    
Sbjct: 104 HNLSLNECFIKVPREGGGERKGNYWTLDPACEDMFEKGNYRRR----RRMKRPFRPPPAH 159

Query: 210 VVSGLG-FG----------ASLLPQGFDFQAPP----------SAPLGCHSQGGYGGLDM 248
              G G FG          A     G+ + APP          S PL             
Sbjct: 160 FQPGKGLFGAGGAAGGCGVAGAGADGYGYLAPPKYLQSGFLNNSWPLPQPPSPMPYASCQ 219

Query: 249 MPAGYDAGAGAPSHAHPHHHHHHHVPHMSPNPGSTY-----MASCPVPAGPGGVGAAGGG 303
           M A   A A A + A P       V      P ++Y     + S  +P  PG V +  G 
Sbjct: 220 MAAAAAAAAAAAAAAGPGSPGAAAVVKGLAGPAASYGPYTRVQSMALP--PGVVNSYNGL 277

Query: 304 GGGDYGPDSSSSPVPSSPAMASAIECHSPYTSPAAHWSS---PG----ASPYLKQPPALT 356
           GG    P     P P  P         +P  +P  H ++   PG    ASP    PPA  
Sbjct: 278 GGPPAAPPPPPHPHP-HPHAHHLHAAAAPPPAPPHHGAAAPPPGQLSPASPATAAPPAPA 336

Query: 357 PSSNP 361
           P+S P
Sbjct: 337 PTSAP 341



 Score = 29.3 bits (64), Expect = 7.5
 Identities = 26/72 (36%), Positives = 31/72 (43%), Gaps = 5/72 (6%)

Query: 5   GGPP---PAPLRRACSPVPGALQAALMSPPPAAAAAAAAAPETTSSSSSSSSASCASSSS 61
           GGPP   P P      P    L AA  +PPPA     AAAP      S +S A+ A  + 
Sbjct: 278 GGPPAAPPPPPHPHPHPHAHHLHAAA-APPPAPPHHGAAAP-PPGQLSPASPATAAPPAP 335

Query: 62  SSNSASAPSAAC 73
           +  SA     AC
Sbjct: 336 APTSAPGLQFAC 347



 Score = 28.9 bits (63), Expect = 9.8
 Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 2/95 (2%)

Query: 11  PLRRACSPVPGALQAALMSPPPAAAAAAAAAPETTSSSSSSSSASCASSSSSSNSASAPS 70
           PL +  SP+P A  +  M+   AAAAAAAAA    S  +++     A  ++S    +   
Sbjct: 205 PLPQPPSPMPYA--SCQMAAAAAAAAAAAAAAGPGSPGAAAVVKGLAGPAASYGPYTRVQ 262

Query: 71  AACKSAGGGGAGAGSGGAKKASSGLRRPEKPPYSY 105
           +     G   +  G GG   A      P   P+++
Sbjct: 263 SMALPPGVVNSYNGLGGPPAAPPPPPHPHPHPHAH 297


>gi|22779860 forkhead box L1 [Homo sapiens]
          Length = 345

 Score =  155 bits (391), Expect = 9e-38
 Identities = 99/246 (40%), Positives = 122/246 (49%), Gaps = 23/246 (9%)

Query: 88  AKKASSGLRRPEKPPYSYIALIVMAIQSSPSKRLTLSEIYQFLQARFPFFRGAYQGWKNS 147
           A  AS     P+KPPYSYIALI MAIQ +P +R+TL+ IYQF+  RFPF+    QGW+NS
Sbjct: 37  ALAASGRAETPQKPPYSYIALIAMAIQDAPEQRVTLNGIYQFIMDRFPFYHDNRQGWQNS 96

Query: 148 VRHNLSLNECFIKLPKGLGRPGKGHYWTIDPASEFMFEEGSFRRRPRGFRRKCQALKPMY 207
           +RHNLSLN+CF+K+P+  GRPGKG YWT+DP    MFE G++RRR R         KP  
Sbjct: 97  IRHNLSLNDCFVKVPREKGRPGKGSYWTLDPRCLDMFENGNYRRRKR---------KPK- 146

Query: 208 HRVVSGLGFGASLLPQGFDFQ----APPSAPLGCHSQG-GYGGLDMMPAGYDAGAGAPSH 262
                G G   +  P+    Q    A P A  G    G     L   PAG       PS 
Sbjct: 147 ----PGPGAPEAKRPRAETHQRSAEAQPEAGSGAGGSGPAISRLQAAPAGPSPLLDGPSP 202

Query: 263 AHPHHHHHHHVPHMSPNPGSTYMASCPVPAGPGGVGAAGGGGGGDYGPDSSSSPVPSSPA 322
             P     H     SPN  +   A        G     G G G    P S SSP  S  +
Sbjct: 203 PAP----LHWPGTASPNEDAGDAAQGAAAVAVGQAARTGDGPGSPLRPASRSSPKSSDKS 258

Query: 323 MASAIE 328
            + +I+
Sbjct: 259 KSFSID 264


>gi|145309320 forkhead box Q1 [Homo sapiens]
          Length = 403

 Score =  154 bits (390), Expect = 1e-37
 Identities = 84/202 (41%), Positives = 115/202 (56%), Gaps = 2/202 (0%)

Query: 5   GGPPPAPLRRACSPVPGALQAALMSPPPAAAAAAAAAPETTSSSSSSSSASCASSSSSSN 64
           G   P+PL  A     G+      + P A   A     +   S+     A  A  ++++ 
Sbjct: 25  GSDAPSPLSAAGDDSLGSDGDCAANSPAAGGGARDTQGDGEQSAGGGPGAEEAIPAAAAA 84

Query: 65  SASAPSAACKSAGGGGAGAGSGGAKKASSGLRRPEKPPYSYIALIVMAIQSSPSKRLTLS 124
           +  A  A   +AG G  GAGSG   ++    RRP KPPYSYIALI MAI+ S   RLTL+
Sbjct: 85  AVVAEGAEAGAAGPGAGGAGSGEGARSKPYTRRP-KPPYSYIALIAMAIRDSAGGRLTLA 143

Query: 125 EIYQFLQARFPFFRGAYQGWKNSVRHNLSLNECFIKLPKGLGRP-GKGHYWTIDPASEFM 183
           EI ++L  +FPFFRG+Y GW+NSVRHNLSLN+CF+K+ +   RP GK +YW ++P SE+ 
Sbjct: 144 EINEYLMGKFPFFRGSYTGWRNSVRHNLSLNDCFVKVLRDPSRPWGKDNYWMLNPNSEYT 203

Query: 184 FEEGSFRRRPRGFRRKCQALKP 205
           F +G FRRR +    +     P
Sbjct: 204 FADGVFRRRRKRLSHRAPVPAP 225


>gi|119395716 forkhead box C1 [Homo sapiens]
          Length = 553

 Score =  153 bits (386), Expect = 3e-37
 Identities = 113/299 (37%), Positives = 143/299 (47%), Gaps = 49/299 (16%)

Query: 100 KPPYSYIALIVMAIQSSPSKRLTLSEIYQFLQARFPFFRGAYQGWKNSVRHNLSLNECFI 159
           KPPYSYIALI MAIQ++P K++TL+ IYQF+  RFPF+R   QGW+NS+RHNLSLNECF+
Sbjct: 78  KPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQNSIRHNLSLNECFV 137

Query: 160 KLPKGLGRPGKGHYWTIDPASEFMFEEGSFRRRPRGFRRKCQALKPMYHRVVSGLGFGAS 219
           K+P+   +PGKG YWT+DP S  MFE GSF RR R F++K  A+K    +    L     
Sbjct: 138 KVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKK-DAVKDKEEKDRLHL---KE 193

Query: 220 LLPQGFDFQAPPSAPLGCHSQGGYGGLDMMPAGYDAGAGAPSHAHPHHHHHHHVPHMSPN 279
             P G   + PP AP               P   D  A  P             P +   
Sbjct: 194 PPPPG---RQPPPAP---------------PEQADGNAPGP-----------QPPPVRIQ 224

Query: 280 PGSTYMASCPVPAGPGGVGAAGGGGGGD-----YGPDSSSSPVPSSPAMASAIECHSPYT 334
              T   +CP P  P    AA G G          PDSSSS + S  +   ++    P +
Sbjct: 225 DIKTENGTCPSPPQPLSPAAALGSGSAAAVPKIESPDSSSSSLSSGSSPPGSLPSARPLS 284

Query: 335 SPAAHWSSPGASPYLKQPPALTPSSNPAASAGLHSSMSSYSLEQSYLHQNAREDLSVGL 393
              A  + P  +P    PP       P  S G        SL  S   Q+A  +LS GL
Sbjct: 285 LDGADSAPPPPAP--SAPP-------PHHSQGFSVDNIMTSLRGS--PQSAAAELSSGL 332



 Score = 36.2 bits (82), Expect = 0.062
 Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 17/101 (16%)

Query: 7   PPPAPLRRACSPVPGALQA--------ALMSPPPAAAAAAAAAPETTSSSSSSSS----- 53
           PPPAP     +P P   Q         +L   P +AAA  ++    ++++SS +      
Sbjct: 293 PPPAP----SAPPPHHSQGFSVDNIMTSLRGSPQSAAAELSSGLLASAAASSRAGIAPPL 348

Query: 54  ASCASSSSSSNSASAPSAACKSAGGGGAGAGSGGAKKASSG 94
           A  A S   S+  S+P +   SAG  G G G  GA   + G
Sbjct: 349 ALGAYSPGQSSLYSSPCSQTSSAGSSGGGGGGAGAAGGAGG 389



 Score = 35.4 bits (80), Expect = 0.10
 Identities = 35/91 (38%), Positives = 39/91 (42%), Gaps = 23/91 (25%)

Query: 7   PPPAPLRRACSPVPGALQAALM------------SPP----PAAA---AAAAAAPETTSS 47
           PPPAP  +A    PG     +             SPP    PAAA    +AAA P+  S 
Sbjct: 201 PPPAPPEQADGNAPGPQPPPVRIQDIKTENGTCPSPPQPLSPAAALGSGSAAAVPKIESP 260

Query: 48  SSSSSSASCASSSSSSNSASAPSAACKSAGG 78
            SSSSS     SS SS   S PSA   S  G
Sbjct: 261 DSSSSSL----SSGSSPPGSLPSARPLSLDG 287



 Score = 33.9 bits (76), Expect = 0.31
 Identities = 32/90 (35%), Positives = 40/90 (44%), Gaps = 15/90 (16%)

Query: 1   MTTEGGPPPAPLRRACSPVPGALQAALMSPPPAAAAAAAAAPETTSSSSSSSSASCASSS 60
           MT+  G P +      S   G L +A      AA++ A  AP     + S   +S  SS 
Sbjct: 314 MTSLRGSPQSAAAELSS---GLLASA------AASSRAGIAPPLALGAYSPGQSSLYSSP 364

Query: 61  SSSNSASAPSAACKSAGGGGAGA--GSGGA 88
            S  S    SA     GGGGAGA  G+GGA
Sbjct: 365 CSQTS----SAGSSGGGGGGAGAAGGAGGA 390



 Score = 30.0 bits (66), Expect = 4.4
 Identities = 34/107 (31%), Positives = 39/107 (36%), Gaps = 15/107 (14%)

Query: 214 LGFGASLLPQGFDFQAPPSAPLGCHSQGGYGGLDMMPAGYDAGAGAPSHAHPHHHHHHHV 273
           L  GA    Q   + +P S      S GG GG          GAGA   A     +H ++
Sbjct: 348 LALGAYSPGQSSLYSSPCSQTSSAGSSGGGGG----------GAGAAGGAGGAGTYHCNL 397

Query: 274 PHMSPNPGSTYMASCPVPAGPGGVGAAGGGGGGDYGPDSSSSPVPSS 320
             MS      Y A        G  G AGG    D  PD S  PV SS
Sbjct: 398 QAMS-----LYAAGERGGHLQGAPGGAGGSAVDDPLPDYSLPPVTSS 439


>gi|18959276 forkhead box D4-like 1 [Homo sapiens]
          Length = 408

 Score =  148 bits (374), Expect = 9e-36
 Identities = 113/307 (36%), Positives = 149/307 (48%), Gaps = 44/307 (14%)

Query: 91  ASSGLRRPEKPPYSYIALIVMAIQSSPSKRLTLSEIYQFLQARFPFFRGAYQGWKNSVRH 150
           AS   R+P KPPYSYIALI MAI  SP KRLTLS I  F+  RFP++R  +  W+NS+RH
Sbjct: 98  ASEDARQPAKPPYSYIALITMAILQSPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRH 157

Query: 151 NLSLNECFIKLPKGLGRPGKGHYWTIDPASEFMFEEGSFRRRPRGFRR------------ 198
           NLSLN+CF+K+P+  G PGKG YW++DPAS+ MF+ GSF RR + F+R            
Sbjct: 158 NLSLNDCFVKIPREPGHPGKGTYWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHP 217

Query: 199 -KCQALKPMYHRVVSGLGFGASLLPQGFDFQAPPSAPLGCHSQGGYGGLDMMPAGY---- 253
               A     H    G   GA  LPQ      P +AP     +  Y  L   P  Y    
Sbjct: 218 FPLPAAHAALHNPRPGPLLGAPALPQPVPGAYPNTAP----GRRPYALLHPHPPRYLLLS 273

Query: 254 -DAGAGAPSHAH-PHHHHHHHVPHMSPNPGSTYMASCPVPAGPG-GVGAAGGGGGGDYGP 310
             A AGAP  A          +P + P+ G       P P   G G+ +  GGG   +  
Sbjct: 274 APAYAGAPKKAEGADLATPGTLPVLQPSLG-------PQPWEEGKGLASPPGGGCISFSI 326

Query: 311 DSSSSPVPSSPAMASAIECHSPYTSPAAHWSSPGASPYLKQPPALTPSSNPAASA---GL 367
           +S    V  +   A      +   SP A WS     P L++P +L+ +    A+A   GL
Sbjct: 327 ESIMQGVRGAGTGA------AQSLSPTA-WS---YCPLLQRPSSLSDNFAATAAASGGGL 376

Query: 368 HSSMSSY 374
              + S+
Sbjct: 377 RQRLRSH 383


>gi|208431824 forkhead box I3 [Homo sapiens]
          Length = 420

 Score =  148 bits (374), Expect = 9e-36
 Identities = 80/188 (42%), Positives = 112/188 (59%), Gaps = 12/188 (6%)

Query: 5   GGPPPAPLRRACSPVPGALQAALMSPPPAAAAAAAAAPETTSSSSSSSSASCASSSSSSN 64
           GGPP A           A  A L +PPP     AAA P       ++ +  C+    +  
Sbjct: 62  GGPPSA--------AAAAAAAYLGAPPPPPPPGAAAGP-FLQPPPAAGTFGCSQRPFAQP 112

Query: 65  SASAPSAACKSAGGGGAGAGSGGAKKASSGLRRPEKPPYSYIALIVMAIQSSPSKRLTLS 124
           + +AP++    AG G  G  S  +++    L +  +PPYSY ALI MAIQS+P ++LTLS
Sbjct: 113 APAAPASPAAPAGPGELGWLSMASRE---DLMKMVRPPYSYSALIAMAIQSAPERKLTLS 169

Query: 125 EIYQFLQARFPFFRGAYQGWKNSVRHNLSLNECFIKLPKGLGRPGKGHYWTIDPASEFMF 184
            IYQF+   FPF++ +  GW+NS+RHNLSLN+CF K+P+    PGKG+YWT+DP  E MF
Sbjct: 170 HIYQFVADSFPFYQRSKAGWQNSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMF 229

Query: 185 EEGSFRRR 192
           + G+FRR+
Sbjct: 230 DNGNFRRK 237



 Score = 32.0 bits (71), Expect = 1.2
 Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 5/73 (6%)

Query: 30  PPPAAAAAAAAAPETTSSSSSSSSASCASSSSSSNSASAPSAACKSAGGGGAGAGSGGAK 89
           PPPAA AAA  AP      ++ +    A  ++   +A+ P       G GG  + +  A 
Sbjct: 18  PPPAATAAAPGAPP-----AARAPYGLADYAAPPAAAANPYLWLNGPGVGGPPSAAAAAA 72

Query: 90  KASSGLRRPEKPP 102
            A  G   P  PP
Sbjct: 73  AAYLGAPPPPPPP 85


>gi|195947376 forkhead box I2 [Homo sapiens]
          Length = 318

 Score =  148 bits (373), Expect = 1e-35
 Identities = 112/296 (37%), Positives = 144/296 (48%), Gaps = 32/296 (10%)

Query: 6   GPPPAPLRRACSPVPGALQAALMSP--PPAAAAAAAAAPETTSSSSSSSSASCASSSSSS 63
           GP  AP        PG  QA    P   P    A    P    ++ + S  S AS    +
Sbjct: 9   GPSSAP--------PGQAQATAHPPGYEPGDLGAVGGGPLLWVNAPALSPKSYASGPGPA 60

Query: 64  NSASAPSAACKSA--GGGGAGAGSGGAKKASSG---LRRPEKPPYSYIALIVMAIQSSPS 118
              +APS        G  G  AG+  A  + SG   L R  +PPYSY ALI MAIQS+P 
Sbjct: 61  PPYAAPSYGAPGPLLGAPGGLAGADLAWLSLSGQQELLRLVRPPYSYSALIAMAIQSAPL 120

Query: 119 KRLTLSEIYQFLQARFPFFRGAYQGWKNSVRHNLSLNECFIKLPKGLGRPGKGHYWTIDP 178
           ++LTLS+IYQ++   FPF++ +  GW+NS+RHNLSLN+CF K+P+    PGKG+YWT+DP
Sbjct: 121 RKLTLSQIYQYVAGNFPFYKRSKAGWQNSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDP 180

Query: 179 ASEFMFEEGSFRRRPRGFRRKCQALKPMYHRVVSGLGFGASLLPQG--FDFQA--PPSAP 234
             E MF+ G+FRR+ R  R +  A      R V G    A   P     D QA   PSAP
Sbjct: 181 NCEKMFDNGNFRRK-RKRRAEASAAVRSGARSVGGAEAPALEPPSAACLDLQASPSPSAP 239

Query: 235 LGCHSQGGY--------GGLDMMPAGYDAGAGAPSHAHPHHHHHHHVPH-MSPNPG 281
                  G+        GGL   P G    AG  S          H P  ++P+PG
Sbjct: 240 EAATCFSGFASAMSALAGGLGTFPGGL---AGDFSFGRRPPTVATHAPQTLNPSPG 292


>gi|24497501 forkhead box A1 [Homo sapiens]
          Length = 472

 Score =  147 bits (371), Expect = 2e-35
 Identities = 118/363 (32%), Positives = 159/363 (43%), Gaps = 53/363 (14%)

Query: 1   MTTEGGPPPAPLRRA-CSPVPGA-LQAALMSPPPAAAA-------AAAAAPETTSSSSSS 51
           MTT G   PA    +  +P  GA L    ++  P  +A       AA      T+ S S 
Sbjct: 53  MTTSGNMTPASFNMSYANPGLGAGLSPGAVAGMPGGSAGAMNSMTAAGVTAMGTALSPSG 112

Query: 52  SSASCASSSSSSNSASAPSAA---CKS------AGGGGAGAGSGGAKKASSGLRRPEKPP 102
             A  A  ++S N     +AA   C S      +  G + AG GG  K         KPP
Sbjct: 113 MGAMGAQQAASMNGLGPYAAAMNPCMSPMAYAPSNLGRSRAGGGGDAKTFKRSYPHAKPP 172

Query: 103 YSYIALIVMAIQSSPSKRLTLSEIYQFLQARFPFFRGAYQGWKNSVRHNLSLNECFIKLP 162
           YSYI+LI MAIQ +PSK LTLSEIYQ++   FP++R   Q W+NS+RH+LS N+CF+K+ 
Sbjct: 173 YSYISLITMAIQQAPSKMLTLSEIYQWIMDLFPYYRQNQQRWQNSIRHSLSFNDCFVKVA 232

Query: 163 KGLGRPGKGHYWTIDPASEFMFEEGSFRRRPRGFRRKCQALKPMYHRVVSGLGFGASLLP 222
           +   +PGKG YWT+ P S  MFE G + RR + F  KC+                     
Sbjct: 233 RSPDKPGKGSYWTLHPDSGNMFENGCYLRRQKRF--KCE--------------------- 269

Query: 223 QGFDFQAPPSAPLGCHSQGGYGGLDMMPAGYD-AGAGAPSHAHPHHHHHHHVPHM---SP 278
                + P +   G    GG G      +  D +GA  PS   P H   H        +P
Sbjct: 270 -----KQPGAGGGGGSGSGGSGAKGGPESRKDPSGASNPSADSPLHRGVHGKTGQLEGAP 324

Query: 279 NPGSTYMASCPVPAGPGGVGAAGGGGGGDYGPDSSSSPVPSSPAMASAIECHSPYTSPAA 338
            PG    A+ P      G  A GG         S++ P+ S P   +++    P    A 
Sbjct: 325 APGP---AASPQTLDHSGATATGGASELKTPASSTAPPISSGPGALASVPASHPAHGLAP 381

Query: 339 HWS 341
           H S
Sbjct: 382 HES 384


>gi|146262007 forkhead box D4-like 6 [Homo sapiens]
          Length = 417

 Score =  147 bits (370), Expect = 2e-35
 Identities = 91/225 (40%), Positives = 120/225 (53%), Gaps = 29/225 (12%)

Query: 77  GGGGAGAGSGGAK--------KASSGLRRPEKPPYSYIALIVMAIQSSPSKRLTLSEIYQ 128
           GGG +     G K         AS   R+P KPPYSYIALI MAI  +P KRLTLS I  
Sbjct: 77  GGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMAILQNPHKRLTLSGICA 136

Query: 129 FLQARFPFFRGAYQGWKNSVRHNLSLNECFIKLPKGLGRPGKGHYWTIDPASEFMFEEGS 188
           F+  RFP++R  +  W+NS+RHNLSLN+CF+K+P+  G PGKG+YW++DPAS+ MF+ GS
Sbjct: 137 FISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGNYWSLDPASQDMFDNGS 196

Query: 189 FRRRPRGFRRKCQALKPMYHRVVSGLGFGASLLPQGFDFQAPPSAPLGCHSQGGYGGLDM 248
           F RR + F+R         H++  G     + LP  F   A  +A    H     G L  
Sbjct: 197 FLRRRKRFKR---------HQLTPG-----AHLPHPFPLPAAHAALHNPHP----GPLLG 238

Query: 249 MPAGYDAGAGAPSHAHPHHHHHHHVPHMSPNPGSTYMASCPVPAG 293
            PA      GA  +  P    +     + P+P    + S PV AG
Sbjct: 239 APAPPQPVPGAYPNTAPGRRPY---ALLHPHPLRYLLLSAPVYAG 280


>gi|157042770 forkhead box D4-like 3 [Homo sapiens]
          Length = 417

 Score =  146 bits (368), Expect = 4e-35
 Identities = 91/225 (40%), Positives = 121/225 (53%), Gaps = 29/225 (12%)

Query: 77  GGGGAGAGSGGAK--------KASSGLRRPEKPPYSYIALIVMAIQSSPSKRLTLSEIYQ 128
           GGG +     G K         AS   R+P KPPYSYIALI MAI  +P KRLTLS I  
Sbjct: 77  GGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMAILQNPHKRLTLSGICA 136

Query: 129 FLQARFPFFRGAYQGWKNSVRHNLSLNECFIKLPKGLGRPGKGHYWTIDPASEFMFEEGS 188
           F+  RFP++R  +  W+NS+RHNLSLN+CF+K+P+  G PGKG+YW++DPAS+ MF+ GS
Sbjct: 137 FISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGNYWSLDPASQDMFDNGS 196

Query: 189 FRRRPRGFRRKCQALKPMYHRVVSGLGFGASLLPQGFDFQAPPSAPLGCHSQGGYGGLDM 248
           F RR + F+R         H++  G     + LP  F     P+A    H+    G L  
Sbjct: 197 FLRRRKRFKR---------HQLTPG-----AHLPHPFPL---PAAHAALHNPRP-GPLLG 238

Query: 249 MPAGYDAGAGAPSHAHPHHHHHHHVPHMSPNPGSTYMASCPVPAG 293
            PA      GA  +  P    +     + P+P    + S PV AG
Sbjct: 239 APAPPQPVPGAYPNTAPGRRPY---ALLHPHPLRYLLLSAPVYAG 280


>gi|149944560 forkhead box D4-like 2 [Homo sapiens]
          Length = 416

 Score =  145 bits (367), Expect = 6e-35
 Identities = 69/130 (53%), Positives = 89/130 (68%), Gaps = 8/130 (6%)

Query: 77  GGGGAGAGSGGAK--------KASSGLRRPEKPPYSYIALIVMAIQSSPSKRLTLSEIYQ 128
           GGG +     G K         AS   R+P KPPYSYIALI MAI  +P KRLTLS I  
Sbjct: 77  GGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMAILQNPHKRLTLSGICA 136

Query: 129 FLQARFPFFRGAYQGWKNSVRHNLSLNECFIKLPKGLGRPGKGHYWTIDPASEFMFEEGS 188
           F+  RFP++R  +  W+NS+RHNLSLN+CF+K+P+  G PGKG+YW++DPAS+ MF+ GS
Sbjct: 137 FISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGNYWSLDPASQDMFDNGS 196

Query: 189 FRRRPRGFRR 198
           F RR + F+R
Sbjct: 197 FLRRRKRFKR 206


>gi|187423902 forkhead box D4-like 5 [Homo sapiens]
          Length = 416

 Score =  145 bits (367), Expect = 6e-35
 Identities = 69/130 (53%), Positives = 89/130 (68%), Gaps = 8/130 (6%)

Query: 77  GGGGAGAGSGGAK--------KASSGLRRPEKPPYSYIALIVMAIQSSPSKRLTLSEIYQ 128
           GGG +     G K         AS   R+P KPPYSYIALI MAI  +P KRLTLS I  
Sbjct: 77  GGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMAILQNPHKRLTLSGICA 136

Query: 129 FLQARFPFFRGAYQGWKNSVRHNLSLNECFIKLPKGLGRPGKGHYWTIDPASEFMFEEGS 188
           F+  RFP++R  +  W+NS+RHNLSLN+CF+K+P+  G PGKG+YW++DPAS+ MF+ GS
Sbjct: 137 FISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGNYWSLDPASQDMFDNGS 196

Query: 189 FRRRPRGFRR 198
           F RR + F+R
Sbjct: 197 FLRRRKRFKR 206


>gi|76880472 forkhead box D4-like 4 [Homo sapiens]
          Length = 416

 Score =  145 bits (367), Expect = 6e-35
 Identities = 69/130 (53%), Positives = 89/130 (68%), Gaps = 8/130 (6%)

Query: 77  GGGGAGAGSGGAK--------KASSGLRRPEKPPYSYIALIVMAIQSSPSKRLTLSEIYQ 128
           GGG +     G K         AS   R+P KPPYSYIALI MAI  +P KRLTLS I  
Sbjct: 77  GGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMAILQNPHKRLTLSGICA 136

Query: 129 FLQARFPFFRGAYQGWKNSVRHNLSLNECFIKLPKGLGRPGKGHYWTIDPASEFMFEEGS 188
           F+  RFP++R  +  W+NS+RHNLSLN+CF+K+P+  G PGKG+YW++DPAS+ MF+ GS
Sbjct: 137 FISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGNYWSLDPASQDMFDNGS 196

Query: 189 FRRRPRGFRR 198
           F RR + F+R
Sbjct: 197 FLRRRKRFKR 206


>gi|4885237 forkhead box C2 [Homo sapiens]
          Length = 501

 Score =  145 bits (365), Expect = 9e-35
 Identities = 65/100 (65%), Positives = 81/100 (81%)

Query: 100 KPPYSYIALIVMAIQSSPSKRLTLSEIYQFLQARFPFFRGAYQGWKNSVRHNLSLNECFI 159
           KPPYSYIALI MAIQ++P K++TL+ IYQF+  RFPF+R   QGW+NS+RHNLSLNECF+
Sbjct: 72  KPPYSYIALITMAIQNAPEKKITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNECFV 131

Query: 160 KLPKGLGRPGKGHYWTIDPASEFMFEEGSFRRRPRGFRRK 199
           K+P+   +PGKG YWT+DP S  MFE GSF RR R F++K
Sbjct: 132 KVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKK 171



 Score = 30.0 bits (66), Expect = 4.4
 Identities = 19/75 (25%), Positives = 27/75 (36%), Gaps = 11/75 (14%)

Query: 226 DFQAPPSAPLGCHSQGGYGGLDMMPAGYDAGAGAPSHAHPHHHHHHHVPHMSPNPGSTYM 285
           D  + P++PL   +         + AG +    A  H H   HH HH P   P P +   
Sbjct: 360 DHPSGPTSPLSALN---------LAAGQEGALAATGHHH--QHHGHHHPQAPPPPPAPQP 408

Query: 286 ASCPVPAGPGGVGAA 300
              P P       A+
Sbjct: 409 QPTPQPGAAAAQAAS 423


>gi|24497506 forkhead box A3 [Homo sapiens]
          Length = 350

 Score =  143 bits (361), Expect = 3e-34
 Identities = 104/305 (34%), Positives = 137/305 (44%), Gaps = 34/305 (11%)

Query: 20  PGALQAALMSPPPAAAAAAAAAPETTSSSSSSSSASCASSSSSSNSASAPSAACKSAGGG 79
           PG L A+ +   P A  A AA    T      S  S                   S+G G
Sbjct: 52  PGGLPASPLPSGPLAPPAPAAPLGPTFPGLGVSGGS------------------SSSGYG 93

Query: 80  GAGAGSGGAKKASSGLRRP---EKPPYSYIALIVMAIQSSPSKRLTLSEIYQFLQARFPF 136
             G G    K+   G RRP    KPPYSYI+LI MAIQ +P K LTLSEIYQ++   FP+
Sbjct: 94  APGPGLVHGKEMPKGYRRPLAHAKPPYSYISLITMAIQQAPGKMLTLSEIYQWIMDLFPY 153

Query: 137 FRGAYQGWKNSVRHNLSLNECFIKLPKGLGRPGKGHYWTIDPASEFMFEEGSFRRRPRGF 196
           +R   Q W+NS+RH+LS N+CF+K+ +   +PGKG YW + P+S  MFE G + RR + F
Sbjct: 154 YRENQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSYWALHPSSGNMFENGCYLRRQKRF 213

Query: 197 RRKCQALKPMYHRVV---SGLGFGASLLPQGFDFQAPPSAPLGCHSQGGYGGLDM----- 248
           + + +  K          +G G  AS         +PP  P         GG D+     
Sbjct: 214 KLEEKVKKGGSGAATTTRNGTGSAASTTTPAATVTSPPQPPPPAPEPEAQGGEDVGALDC 273

Query: 249 -MPAG---YDAGAGAPSHAHPHHHHHHHVPHMSPNPGSTYMASCP-VPAGPGGVGAAGGG 303
             PA    Y  G   P        ++ + P    N  S    + P +  G GG GA GG 
Sbjct: 274 GSPASSTPYFTGLELPGELKLDAPYNFNHPFSINNLMSEQTPAPPKLDVGFGGYGAEGGE 333

Query: 304 GGGDY 308
            G  Y
Sbjct: 334 PGVYY 338


>gi|75677594 forkhead box D4 [Homo sapiens]
          Length = 439

 Score =  143 bits (360), Expect = 4e-34
 Identities = 65/108 (60%), Positives = 83/108 (76%)

Query: 91  ASSGLRRPEKPPYSYIALIVMAIQSSPSKRLTLSEIYQFLQARFPFFRGAYQGWKNSVRH 150
           AS   R+P KPP SYIALI MAI  SP KRLTLS I  F+  RFP++R  +  W+NS+RH
Sbjct: 95  ASEDARQPAKPPSSYIALITMAILQSPHKRLTLSGICAFISDRFPYYRRKFPAWQNSIRH 154

Query: 151 NLSLNECFIKLPKGLGRPGKGHYWTIDPASEFMFEEGSFRRRPRGFRR 198
           NLSLN+CF+K+P+  GRPGKG+YW++DPAS+ MF+ GSF RR + F+R
Sbjct: 155 NLSLNDCFVKIPREPGRPGKGNYWSLDPASQDMFDNGSFLRRRKRFQR 202


>gi|24497504 forkhead box A2 isoform 2 [Homo sapiens]
          Length = 457

 Score =  142 bits (357), Expect = 8e-34
 Identities = 118/381 (30%), Positives = 153/381 (40%), Gaps = 74/381 (19%)

Query: 20  PGALQAALMSPPPAAAAAAAAAPETTSSSSSSSSASCASSSSSSNSASAPSAACKSAGGG 79
           PGA   A M     AA  A   P  + S S     +  +    +  A+  S    S   G
Sbjct: 82  PGAGAMAGMGGSAGAAGVAGMGPHLSPSLSPLGGQAAGAMGGLAPYANMNSM---SPMYG 138

Query: 80  GAGAGSGGAKKASSGLRRPEKPPYSYIALIVMAIQSSPSKRLTLSEIYQFLQARFPFFRG 139
            AG       K         KPPYSYI+LI MAIQ SP+K LTLSEIYQ++   FPF+R 
Sbjct: 139 QAGLSRARDPKTYRRSYTHAKPPYSYISLITMAIQQSPNKMLTLSEIYQWIMDLFPFYRQ 198

Query: 140 AYQGWKNSVRHNLSLNECFIKLPKGLGRPGKGHYWTIDPASEFMFEEGSFRRRPRGFR-R 198
             Q W+NS+RH+LS N+CF+K+P+   +PGKG +WT+ P S  MFE G + RR + F+  
Sbjct: 199 NQQRWQNSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCE 258

Query: 199 KCQALKPMYHRVVSG-------------LGFG---ASLLPQGFDFQAPPSAPLGCHSQGG 242
           K  ALK       SG             LG     AS  P G +     ++P   H +GG
Sbjct: 259 KQLALKEAAGAAGSGKKAAAGAQASQAQLGEAAGPASETPAGTESPHSSASPCQEHKRGG 318

Query: 243 YGGLDMMPA-----------------------GYDAGAGAPSHAH--------------- 264
            G L   PA                       G     G P  AH               
Sbjct: 319 LGELKGTPAAALSPPEPAPSPGQQQQAAAHLLGPPHHPGLPPEAHLKPEHHYAFNHPFSI 378

Query: 265 ---------PHHHHHHHVPHMSPNPGSTYMASCPVPAGPGGVGAAGGGGGGDYGPDSSSS 315
                     HH HHHH PH         +   P      G G+   G     GP ++ +
Sbjct: 379 NNLMSSEQQHHHSHHHHQPHKMDLKAYEQVMHYP------GYGSPMPGSLA-MGPVTNKT 431

Query: 316 PVPSSPAMASAIECHSPYTSP 336
            + +SP  A        Y+ P
Sbjct: 432 GLDASPLAADTSYYQGVYSRP 452



 Score = 29.6 bits (65), Expect = 5.8
 Identities = 35/147 (23%), Positives = 50/147 (34%), Gaps = 15/147 (10%)

Query: 298 GAAGGGGGGDYGPDSSSSPV--PSSPAMASAIECHSPYTS--PAAHWSSPGASPYLKQPP 353
           GAAG G     G  +S + +   + PA  +     SP++S  P       G       P 
Sbjct: 268 GAAGSGKKAAAGAQASQAQLGEAAGPASETPAGTESPHSSASPCQEHKRGGLGELKGTPA 327

Query: 354 ALTPSSNPAASAGLHSSMSSYSLEQSYLHQNAREDLSVGLPRYQHHSTPVCDRKDFVLNF 413
           A      PA S G     +++ L   +           GLP   H         +   + 
Sbjct: 328 AALSPPEPAPSPGQQQQAAAHLLGPPH---------HPGLPPEAHLKPEHHYAFNHPFSI 378

Query: 414 NGISSFHPSASGSYYHHHHQSVCQDIK 440
           N + S       S  HHHHQ    D+K
Sbjct: 379 NNLMSSEQQHHHS--HHHHQPHKMDLK 403


>gi|194394143 forkhead box A2 isoform 1 [Homo sapiens]
          Length = 463

 Score =  142 bits (357), Expect = 8e-34
 Identities = 118/381 (30%), Positives = 153/381 (40%), Gaps = 74/381 (19%)

Query: 20  PGALQAALMSPPPAAAAAAAAAPETTSSSSSSSSASCASSSSSSNSASAPSAACKSAGGG 79
           PGA   A M     AA  A   P  + S S     +  +    +  A+  S    S   G
Sbjct: 88  PGAGAMAGMGGSAGAAGVAGMGPHLSPSLSPLGGQAAGAMGGLAPYANMNSM---SPMYG 144

Query: 80  GAGAGSGGAKKASSGLRRPEKPPYSYIALIVMAIQSSPSKRLTLSEIYQFLQARFPFFRG 139
            AG       K         KPPYSYI+LI MAIQ SP+K LTLSEIYQ++   FPF+R 
Sbjct: 145 QAGLSRARDPKTYRRSYTHAKPPYSYISLITMAIQQSPNKMLTLSEIYQWIMDLFPFYRQ 204

Query: 140 AYQGWKNSVRHNLSLNECFIKLPKGLGRPGKGHYWTIDPASEFMFEEGSFRRRPRGFR-R 198
             Q W+NS+RH+LS N+CF+K+P+   +PGKG +WT+ P S  MFE G + RR + F+  
Sbjct: 205 NQQRWQNSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCE 264

Query: 199 KCQALKPMYHRVVSG-------------LGFG---ASLLPQGFDFQAPPSAPLGCHSQGG 242
           K  ALK       SG             LG     AS  P G +     ++P   H +GG
Sbjct: 265 KQLALKEAAGAAGSGKKAAAGAQASQAQLGEAAGPASETPAGTESPHSSASPCQEHKRGG 324

Query: 243 YGGLDMMPA-----------------------GYDAGAGAPSHAH--------------- 264
            G L   PA                       G     G P  AH               
Sbjct: 325 LGELKGTPAAALSPPEPAPSPGQQQQAAAHLLGPPHHPGLPPEAHLKPEHHYAFNHPFSI 384

Query: 265 ---------PHHHHHHHVPHMSPNPGSTYMASCPVPAGPGGVGAAGGGGGGDYGPDSSSS 315
                     HH HHHH PH         +   P      G G+   G     GP ++ +
Sbjct: 385 NNLMSSEQQHHHSHHHHQPHKMDLKAYEQVMHYP------GYGSPMPGSLA-MGPVTNKT 437

Query: 316 PVPSSPAMASAIECHSPYTSP 336
            + +SP  A        Y+ P
Sbjct: 438 GLDASPLAADTSYYQGVYSRP 458



 Score = 29.6 bits (65), Expect = 5.8
 Identities = 35/147 (23%), Positives = 50/147 (34%), Gaps = 15/147 (10%)

Query: 298 GAAGGGGGGDYGPDSSSSPV--PSSPAMASAIECHSPYTS--PAAHWSSPGASPYLKQPP 353
           GAAG G     G  +S + +   + PA  +     SP++S  P       G       P 
Sbjct: 274 GAAGSGKKAAAGAQASQAQLGEAAGPASETPAGTESPHSSASPCQEHKRGGLGELKGTPA 333

Query: 354 ALTPSSNPAASAGLHSSMSSYSLEQSYLHQNAREDLSVGLPRYQHHSTPVCDRKDFVLNF 413
           A      PA S G     +++ L   +           GLP   H         +   + 
Sbjct: 334 AALSPPEPAPSPGQQQQAAAHLLGPPH---------HPGLPPEAHLKPEHHYAFNHPFSI 384

Query: 414 NGISSFHPSASGSYYHHHHQSVCQDIK 440
           N + S       S  HHHHQ    D+K
Sbjct: 385 NNLMSSEQQHHHS--HHHHQPHKMDLK 409


>gi|32307177 forkhead box G1 [Homo sapiens]
          Length = 489

 Score =  140 bits (353), Expect = 2e-33
 Identities = 84/209 (40%), Positives = 107/209 (51%), Gaps = 19/209 (9%)

Query: 7   PPPAPLRRACSPVPGA-----LQAALMSPPPAAAAAAAAAPETTSSSSSSSSASCASSSS 61
           PPPAP        P A      Q  L+ PPP    AAA                      
Sbjct: 78  PPPAPQPPQTRGAPAADDDKGPQQLLLPPPPPPPPAAALDGAKADGLGGKGEPG---GGP 134

Query: 62  SSNSASAPSAACKSAGGGGA---GAGSGG-----AKKASSGLRRPEKPPYSYIALIVMAI 113
              +   P    K AG GG    GAG GG      K+      + EKPP+SY ALI+MAI
Sbjct: 135 GELAPVGPDEKEKGAGAGGEEKKGAGEGGKDGEGGKEGEKKNGKYEKPPFSYNALIMMAI 194

Query: 114 QSSPSKRLTLSEIYQFLQARFPFFRGAYQGWKNSVRHNLSLNECFIKLPKGLGRPGKGHY 173
           + SP KRLTL+ IY+F+   FP++R   QGW+NS+RHNLSLN+CF+K+P+    PGKG+Y
Sbjct: 195 RQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQNSIRHNLSLNKCFVKVPRHYDDPGKGNY 254

Query: 174 WTIDPASEFMF---EEGSFRRRPRGFRRK 199
           W +DP+S+ +F     G  RRR    R K
Sbjct: 255 WMLDPSSDDVFIGGTTGKLRRRSTTSRAK 283



 Score = 47.0 bits (110), Expect = 3e-05
 Identities = 25/73 (34%), Positives = 29/73 (39%), Gaps = 4/73 (5%)

Query: 260 PSHAHPHHHHHHHVPHMSPNPGSTYMASCPVPAGPGGVGAAGGGGG----GDYGPDSSSS 315
           P H H HHHHHHH P  +P P        P P  P         G      D GP     
Sbjct: 45  PQHHHHHHHHHHHPPPPAPQPPPPPQQQQPPPPPPPAPQPPQTRGAPAADDDKGPQQLLL 104

Query: 316 PVPSSPAMASAIE 328
           P P  P  A+A++
Sbjct: 105 PPPPPPPPAAALD 117


>gi|11386197 forkhead box E3 [Homo sapiens]
          Length = 319

 Score =  140 bits (353), Expect = 2e-33
 Identities = 72/168 (42%), Positives = 99/168 (58%), Gaps = 7/168 (4%)

Query: 31  PPAAAAAAAAAPETTSSSSSSSSASCASSSSSSNSASAPSAACKSAGGGGAGAGSGGAKK 90
           PPAA +   A P    S    S  + A           P  A    G        G  ++
Sbjct: 9   PPAAFSGFPALPAVAPSGPPPSPLAGAEPGRE------PEEAAAGRGEAAPTPAPGPGRR 62

Query: 91  ASSGLRRPEKPPYSYIALIVMAIQSSPSKRLTLSEIYQFLQARFPFFRGAYQGWKNSVRH 150
               L+R  KPPYSYIALI MA+  +P +RLTL+ IY+F+  RF F+R + + W+NS+RH
Sbjct: 63  RRRPLQRG-KPPYSYIALIAMALAHAPGRRLTLAAIYRFITERFAFYRDSPRKWQNSIRH 121

Query: 151 NLSLNECFIKLPKGLGRPGKGHYWTIDPASEFMFEEGSFRRRPRGFRR 198
           NL+LN+CF+K+P+  G PGKG+YWT+DPA+  MF+ GSF RR + F+R
Sbjct: 122 NLTLNDCFVKVPREPGNPGKGNYWTLDPAAADMFDNGSFLRRRKRFKR 169


>gi|28973785 forkhead box S1 [Homo sapiens]
          Length = 330

 Score =  139 bits (351), Expect = 4e-33
 Identities = 65/105 (61%), Positives = 78/105 (74%)

Query: 98  PEKPPYSYIALIVMAIQSSPSKRLTLSEIYQFLQARFPFFRGAYQGWKNSVRHNLSLNEC 157
           P KPPYSYIALI MAIQSSP +R TLS IY+++  RF F+R    GW+NS+RHNLSLNEC
Sbjct: 16  PTKPPYSYIALIAMAIQSSPGQRATLSGIYRYIMGRFAFYRHNRPGWQNSIRHNLSLNEC 75

Query: 158 FIKLPKGLGRPGKGHYWTIDPASEFMFEEGSFRRRPRGFRRKCQA 202
           F+K+P+   +PGKG YWT+DP    MFE GSF RR R F R+  A
Sbjct: 76  FVKVPRDDRKPGKGSYWTLDPDCHDMFEHGSFLRRRRRFTRQTGA 120


>gi|105554437 forkhead box B1 [Homo sapiens]
          Length = 325

 Score =  135 bits (339), Expect = 1e-31
 Identities = 104/288 (36%), Positives = 138/288 (47%), Gaps = 26/288 (9%)

Query: 99  EKPPYSYIALIVMAIQSSPSKRLTLSEIYQFLQARFPFFRGAYQGWKNSVRHNLSLNECF 158
           +KPPYSYI+L  MAIQSSP K L LSEIY+F+  RFP++R   Q W+NS+RHNLS N+CF
Sbjct: 12  QKPPYSYISLTAMAIQSSPEKMLPLSEIYKFIMDRFPYYRENTQRWQNSLRHNLSFNDCF 71

Query: 159 IKLPKGLGRPGKGHYWTIDPASEFMFEEGSFRRRPRGFRRKCQALKPMYHRVVSGLGFGA 218
           IK+P+   +PGKG +W + P+   MFE GSF RR    R++ + LK   H   S     A
Sbjct: 72  IKIPRRPDQPGKGSFWALHPSCGDMFENGSFLRR----RKRFKVLK-SDHLAPSKPADAA 126

Query: 219 SLLPQGFDFQAPPSAPLGCHSQGGYGGLDMMP-AGYDAGAGA-PS-HAHPHHHHHHHVPH 275
             L Q    +    A  G H       L  MP A Y+ G  A PS   HP    +     
Sbjct: 127 QYLQQQAKLRLSALAASGTH-------LPQMPAAAYNLGGVAQPSGFKHPFAIENIIARE 179

Query: 276 MSPNPGSTYMASCPVPAG---PGGVGAAGGGGG-------GDYGPDSSSSPVPSSPAMAS 325
                G  + A  PVPA    P  +   G   G       G  G   S++P+  +    S
Sbjct: 180 YKMPGGLAFSAMQPVPAAYPLPNQLTTMGSSLGTGWPHVYGSAGMIDSATPISMASGDYS 239

Query: 326 AIECHSPYTSPAAHWSSPGASPYLKQPPALTPSSNPAASAGLHSSMSS 373
           A          AA  + P     +K  PA  P+  PA  A + + +S+
Sbjct: 240 AYGVPLKPLCHAAGQTLPAIPVPIKPTPAAVPAL-PALPAPIPTLLSN 286


>gi|61966923 forkhead box B2 [Homo sapiens]
          Length = 432

 Score =  133 bits (334), Expect = 4e-31
 Identities = 72/177 (40%), Positives = 95/177 (53%), Gaps = 40/177 (22%)

Query: 99  EKPPYSYIALIVMAIQSSPSKRLTLSEIYQFLQARFPFFRGAYQGWKNSVRHNLSLNECF 158
           +KPPYSYI+L  MAIQ S  K L LS+IY+F+  RFP++R   Q W+NS+RHNLS N+CF
Sbjct: 12  QKPPYSYISLTAMAIQHSAEKMLPLSDIYKFIMERFPYYREHTQRWQNSLRHNLSFNDCF 71

Query: 159 IKLPKGLGRPGKGHYWTIDPASEFMFEEGSFRRRPRGFRRKCQALKPMYHRVVSGLGFGA 218
           IK+P+   +PGKG +W + P    MFE GSF RR    R++ + L+  +  + +G     
Sbjct: 72  IKIPRRPDQPGKGSFWALHPDCGDMFENGSFLRR----RKRFKVLRADHTHLHAG----- 122

Query: 219 SLLPQGFDFQAPPSAPLGCHSQGGYGGLDMMPAGYDAGAGAPSHAHPHHHHHHHVPH 275
                     +  SAP                     GAG   H HPHHHHH H  H
Sbjct: 123 ----------STKSAP---------------------GAGPGGHLHPHHHHHPHHHH 148


>gi|21618327 forkhead box I1 isoform a [Homo sapiens]
          Length = 378

 Score =  127 bits (319), Expect = 2e-29
 Identities = 55/93 (59%), Positives = 72/93 (77%)

Query: 100 KPPYSYIALIVMAIQSSPSKRLTLSEIYQFLQARFPFFRGAYQGWKNSVRHNLSLNECFI 159
           +PPYSY ALI MAI  +P KRLTLS+IYQ++   FPF+  +  GW+NS+RHNLSLN+CF 
Sbjct: 123 RPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQNSIRHNLSLNDCFK 182

Query: 160 KLPKGLGRPGKGHYWTIDPASEFMFEEGSFRRR 192
           K+P+    PGKG+YWT+DP  E MF+ G+FRR+
Sbjct: 183 KVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRK 215


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.314    0.129    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,280,859
Number of Sequences: 37866
Number of extensions: 1476099
Number of successful extensions: 33847
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 915
Number of HSP's successfully gapped in prelim test: 925
Number of HSP's that attempted gapping in prelim test: 14392
Number of HSP's gapped (non-prelim): 13084
length of query: 444
length of database: 18,247,518
effective HSP length: 105
effective length of query: 339
effective length of database: 14,271,588
effective search space: 4838068332
effective search space used: 4838068332
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 63 (28.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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