Guide to the Human Genome
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Name: AP2B1 Sequence: fasta or formatted (937aa) NCBI GI: 4557469
Description:

adaptor-related protein complex 2, beta 1 subunit isoform b

Referenced in:

ER, Golgi, and the Secretory Pathway

Other entries for this name:
alt prot [951aa] adaptor-related protein complex 2, beta 1 subunit isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         66           2
 C cysteine            1.7         16           1
 D aspartate           6.0         56           2
 E glutamate           6.5         61           2
 F phenylalanine       3.0         28           2
 G glycine             4.1         38           3
 H histidine           1.7         16           2
 I isoleucine          6.3         59           2
 K lysine              6.5         61           2
 L leucine            12.1        113           2
 M methionine          2.6         24           1
 N asparagine          6.1         57           3
 P proline             5.7         53           2
 Q glutamine           4.4         41           2
 R arginine            3.2         30           1
 S serine              6.3         59           2
 T threonine           4.8         45           3
 V valine              8.4         79           2
 W tryptophan          0.6          6           1
 Y tyrosine            3.1         29           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   adaptor-related protein complex 2, beta 1 subunit iso... 
AP2B1                 0.995   adaptor-related protein complex 2, beta 1 subunit is...
AP1B1                 0.843   adaptor-related protein complex 1 beta 1 subunit iso...
AP1B1                 0.842   adaptor-related protein complex 1 beta 1 subunit iso...
AP4B1                 0.151   adaptor-related protein complex 4, beta 1 subunit [...
AP3B2                 0.139   adaptor-related protein complex 3, beta 2 subunit [H...
AP3B1                 0.134   adaptor-related protein complex 3, beta 1 subunit [H...
AP2A2                 0.039   adaptor-related protein complex 2, alpha 2 subunit [...
AP2A1                 0.038   adaptor-related protein complex 2, alpha 1 subunit i...
AP2A1                 0.036   adaptor-related protein complex 2, alpha 1 subunit i...
AP3D1                 0.034   adaptor-related protein complex 3, delta 1 subunit ...
COPB1                 0.030   coatomer protein complex, subunit beta 1 
COPB1                 0.030   coatomer protein complex, subunit beta 1 
COPB1                 0.030   coatomer protein complex, subunit beta 1 
AP1G1                 0.028   adaptor-related protein complex 1, gamma 1 subunit i...
AP1G1                 0.027   adaptor-related protein complex 1, gamma 1 subunit i...
COPG2                 0.022   coatomer protein complex, subunit gamma 2 
COPG                  0.020   coatomer protein complex, subunit gamma 1 
AP4E1                 0.019   adaptor-related protein complex 4, epsilon 1 subunit...
AP1G2                 0.016   adaptor-related protein complex 1, gamma 2 subunit [H...
AP3D1                 0.014   adaptor-related protein complex 3, delta 1 subunit ...
SNAP91                0.008   synaptosomal-associated protein, 91kDa homolog 
SHANK2                0.006   SH3 and multiple ankyrin repeat domains 2 isoform 1...
SPAG6                 0.006   sperm associated antigen 6 isoform 1 
SPAG6                 0.006   sperm associated antigen 6 isoform 2 
EVPL                  0.005   envoplakin 
MYBBP1A               0.005   MYB binding protein 1a isoform 1 
MYBBP1A               0.005   MYB binding protein 1a isoform 2 
NCAPD3                0.005   non-SMC condensin II complex, subunit D3 
TRIM7                 0.005   tripartite motif-containing 7 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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