Guide to the Human Genome
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Name: AP1G2 Sequence: fasta or formatted (785aa) NCBI GI: 4503843
Description:

adaptor-related protein complex 1, gamma 2 subunit

Referenced in:

ER, Golgi, and the Secretory Pathway

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.9         70           2
 C cysteine            1.9         15           1
 D aspartate           4.8         38           2
 E glutamate           6.6         52           3
 F phenylalanine       2.3         18           1
 G glycine             4.7         37           2
 H histidine           3.7         29           2
 I isoleucine          5.0         39           1
 K lysine              2.9         23           2
 L leucine            15.3        120           3
 M methionine          2.0         16           2
 N asparagine          3.2         25           2
 P proline             5.9         46           4
 Q glutamine           5.5         43           2
 R arginine            6.8         53           2
 S serine              6.2         49           2
 T threonine           5.0         39           2
 V valine              7.1         56           2
 W tryptophan          0.4          3           1
 Y tyrosine            1.8         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   adaptor-related protein complex 1, gamma 2 subunit [H... 
AP1G1                 0.603   adaptor-related protein complex 1, gamma 1 subunit i...
AP1G1                 0.600   adaptor-related protein complex 1, gamma 1 subunit i...
AP2A1                 0.156   adaptor-related protein complex 2, alpha 1 subunit i...
AP2A1                 0.155   adaptor-related protein complex 2, alpha 1 subunit i...
AP2A2                 0.150   adaptor-related protein complex 2, alpha 2 subunit [...
AP4E1                 0.126   adaptor-related protein complex 4, epsilon 1 subunit...
AP3D1                 0.078   adaptor-related protein complex 3, delta 1 subunit ...
AP3D1                 0.042   adaptor-related protein complex 3, delta 1 subunit ...
GGA3                  0.031   ADP-ribosylation factor binding protein 3 isoform sh...
GGA3                  0.031   ADP-ribosylation factor binding protein 3 isoform lo...
GGA2                  0.029   ADP-ribosylation factor binding protein 2 
GGA1                  0.027   golgi associated, gamma adaptin ear containing, ARF b...
GGA1                  0.027   golgi associated, gamma adaptin ear containing, ARF ...
LOC100293916          0.026   PREDICTED: similar to ADP-ribosylation factor bindi...
AP1B1                 0.022   adaptor-related protein complex 1 beta 1 subunit iso...
AP1B1                 0.022   adaptor-related protein complex 1 beta 1 subunit iso...
AP3B1                 0.020   adaptor-related protein complex 3, beta 1 subunit [H...
AP2B1                 0.019   adaptor-related protein complex 2, beta 1 subunit is...
AP2B1                 0.019   adaptor-related protein complex 2, beta 1 subunit iso...
AP4B1                 0.017   adaptor-related protein complex 4, beta 1 subunit [...
COPB1                 0.016   coatomer protein complex, subunit beta 1 
COPB1                 0.016   coatomer protein complex, subunit beta 1 
COPB1                 0.016   coatomer protein complex, subunit beta 1 
COPG                  0.015   coatomer protein complex, subunit gamma 1 
COPG2                 0.014   coatomer protein complex, subunit gamma 2 
RAPH1                 0.008   Ras association and pleckstrin homology domains 1 is...
PHACTR1               0.007   phosphatase and actin regulator 1 
TH                    0.007   tyrosine hydroxylase isoform c 
TH                    0.007   tyrosine hydroxylase isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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