Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: AP2A1 Sequence: fasta or formatted (977aa) NCBI GI: 19913414
Description:

adaptor-related protein complex 2, alpha 1 subunit isoform 1

Referenced in:

ER, Golgi, and the Secretory Pathway

Other entries for this name:
alt prot [955aa] adaptor-related protein complex 2, alpha 1 subunit isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.8         96           2
 C cysteine            1.9         19           1
 D aspartate           5.0         49           2
 E glutamate           5.7         56           2
 F phenylalanine       3.9         38           2
 G glycine             5.2         51           2
 H histidine           1.6         16           1
 I isoleucine          4.7         46           2
 K lysine              5.6         55           3
 L leucine            12.2        119           3
 M methionine          1.9         19           1
 N asparagine          4.6         45           2
 P proline             6.2         61           3
 Q glutamine           4.8         47           2
 R arginine            4.8         47           2
 S serine              7.0         68           2
 T threonine           4.3         42           1
 V valine              7.3         71           2
 W tryptophan          0.5          5           1
 Y tyrosine            2.8         27           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   adaptor-related protein complex 2, alpha 1 subunit i... 
AP2A1                 0.971   adaptor-related protein complex 2, alpha 1 subunit i...
AP2A2                 0.790   adaptor-related protein complex 2, alpha 2 subunit [...
AP1G1                 0.133   adaptor-related protein complex 1, gamma 1 subunit i...
AP1G1                 0.131   adaptor-related protein complex 1, gamma 1 subunit i...
AP1G2                 0.124   adaptor-related protein complex 1, gamma 2 subunit [H...
AP4E1                 0.076   adaptor-related protein complex 4, epsilon 1 subunit...
AP3D1                 0.059   adaptor-related protein complex 3, delta 1 subunit ...
AP1B1                 0.038   adaptor-related protein complex 1 beta 1 subunit iso...
AP1B1                 0.037   adaptor-related protein complex 1 beta 1 subunit iso...
AP2B1                 0.035   adaptor-related protein complex 2, beta 1 subunit iso...
AP2B1                 0.034   adaptor-related protein complex 2, beta 1 subunit is...
AP3D1                 0.023   adaptor-related protein complex 3, delta 1 subunit ...
SREBF1                0.013   sterol regulatory element binding transcription fact...
SREBF1                0.013   sterol regulatory element binding transcription fact...
LOC100290946          0.012   PREDICTED: hypothetical protein XP_002347121 
LOC100288840          0.012   PREDICTED: hypothetical protein XP_002344246 
KIAA1522              0.012   hypothetical protein LOC57648 
OTOG                  0.012   PREDICTED: otogelin isoform 1 
OTOG                  0.012   PREDICTED: otogelin isoform 2 
OTOG                  0.012   PREDICTED: otogelin isoform 2 
OTOG                  0.012   PREDICTED: otogelin isoform 1 
OTOG                  0.012   PREDICTED: otogelin isoform 2 
OTOG                  0.012   PREDICTED: otogelin isoform 1 
DGKK                  0.012   diacylglycerol kinase kappa 
KIAA0754              0.011   hypothetical protein LOC643314 
FMNL1                 0.011   formin-like 1 
PRR12                 0.011   proline rich 12 
WIPF3                 0.011   WAS/WASL interacting protein family, member 3 [Homo...
FLJ22184              0.010   PREDICTED: hypothetical protein LOC80164 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press