Guide to the Human Genome
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Name: SPAG6 Sequence: fasta or formatted (458aa) NCBI GI: 27262641
Description:

sperm associated antigen 6 isoform 2

Referenced in:

Additional Interaction Domain Families
Testes and Sperm

Other entries for this name:
alt prot [509aa] sperm associated antigen 6 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            13.5         62           4
 C cysteine            2.0          9           1
 D aspartate           4.1         19           2
 E glutamate           5.7         26           2
 F phenylalanine       2.2         10           1
 G glycine             4.1         19           2
 H histidine           2.6         12           1
 I isoleucine          5.7         26           2
 K lysine              5.7         26           2
 L leucine            12.4         57           3
 M methionine          2.0          9           2
 N asparagine          3.1         14           1
 P proline             4.6         21           2
 Q glutamine           6.1         28           2
 R arginine            3.3         15           1
 S serine              5.9         27           2
 T threonine           4.4         20           2
 V valine              9.6         44           2
 W tryptophan          0.7          3           1
 Y tyrosine            2.4         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   sperm associated antigen 6 isoform 2 
SPAG6                 0.956   sperm associated antigen 6 isoform 1 
KPNA5                 0.067   karyopherin alpha 5 
KPNA7                 0.063   karyopherin 7 
KPNA1                 0.062   karyopherin alpha 1 
KPNA4                 0.060   karyopherin alpha 4 
KPNA6                 0.059   karyopherin alpha 6 
KPNA3                 0.055   karyopherin alpha 3 
KPNA2                 0.051   karyopherin alpha 2 
ANKAR                 0.046   ankyrin and armadillo repeat containing 
ARMC4                 0.028   armadillo repeat containing 4 
ARMC3                 0.020   armadillo repeat containing 3 
CTNNB1                0.017   catenin (cadherin-associated protein), beta 1, 88kD...
CTNNB1                0.017   catenin (cadherin-associated protein), beta 1, 88kD...
CTNNB1                0.017   catenin (cadherin-associated protein), beta 1, 88kDa ...
SIL1                  0.017   SIL1 protein precursor 
SIL1                  0.017   SIL1 protein precursor 
STK36                 0.017   serine/threonine kinase 36 
RTDR1                 0.016   rhabdoid tumor deletion region protein 1 
MTOR                  0.015   FK506 binding protein 12-rapamycin associated protein...
RAP1GDS1              0.015   RAP1, GTP-GDP dissociation stimulator 1 isoform 3 [...
RAP1GDS1              0.015   RAP1, GTP-GDP dissociation stimulator 1 isoform 2 [...
RAP1GDS1              0.015   RAP1, GTP-GDP dissociation stimulator 1 isoform 1 [...
C7orf27               0.015   hypothetical protein LOC221927 
RAP1GDS1              0.014   RAP1, GTP-GDP dissociation stimulator 1 isoform 5 [...
RAP1GDS1              0.014   RAP1, GTP-GDP dissociation stimulator 1 isoform 4 [...
TMCO6                 0.014   transmembrane and coiled-coil domains 6 
SARM1                 0.014   sterile alpha and TIR motif containing 1 
AP2B1                 0.013   adaptor-related protein complex 2, beta 1 subunit is...
AP2B1                 0.013   adaptor-related protein complex 2, beta 1 subunit iso...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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