Guide to the Human Genome
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Name: AP2A1 Sequence: fasta or formatted (955aa) NCBI GI: 19913416
Description:

adaptor-related protein complex 2, alpha 1 subunit isoform 2

Referenced in:

ER, Golgi, and the Secretory Pathway

Other entries for this name:
alt prot [977aa] adaptor-related protein complex 2, alpha 1 subunit isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.4         90           2
 C cysteine            2.0         19           1
 D aspartate           4.9         47           2
 E glutamate           5.5         53           2
 F phenylalanine       4.0         38           2
 G glycine             5.3         51           2
 H histidine           1.7         16           1
 I isoleucine          4.8         46           2
 K lysine              5.8         55           3
 L leucine            12.1        116           3
 M methionine          1.9         18           1
 N asparagine          4.7         45           2
 P proline             5.8         55           3
 Q glutamine           4.9         47           2
 R arginine            4.9         47           2
 S serine              7.0         67           2
 T threonine           4.4         42           1
 V valine              7.4         71           2
 W tryptophan          0.5          5           1
 Y tyrosine            2.8         27           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   adaptor-related protein complex 2, alpha 1 subunit i... 
AP2A1                 0.994   adaptor-related protein complex 2, alpha 1 subunit i...
AP2A2                 0.813   adaptor-related protein complex 2, alpha 2 subunit [...
AP1G1                 0.136   adaptor-related protein complex 1, gamma 1 subunit i...
AP1G1                 0.134   adaptor-related protein complex 1, gamma 1 subunit i...
AP1G2                 0.126   adaptor-related protein complex 1, gamma 2 subunit [H...
AP4E1                 0.077   adaptor-related protein complex 4, epsilon 1 subunit...
AP3D1                 0.060   adaptor-related protein complex 3, delta 1 subunit ...
AP1B1                 0.038   adaptor-related protein complex 1 beta 1 subunit iso...
AP1B1                 0.038   adaptor-related protein complex 1 beta 1 subunit iso...
AP2B1                 0.037   adaptor-related protein complex 2, beta 1 subunit iso...
AP2B1                 0.035   adaptor-related protein complex 2, beta 1 subunit is...
AP3D1                 0.023   adaptor-related protein complex 3, delta 1 subunit ...
LOC100290946          0.011   PREDICTED: hypothetical protein XP_002347121 
LOC100288840          0.011   PREDICTED: hypothetical protein XP_002344246 
IKZF4                 0.009   zinc finger protein, subfamily 1A, 4 
MLL2                  0.009   myeloid/lymphoid or mixed-lineage leukemia 2 
KRBA1                 0.008   KRAB A domain containing 1 
RGS3                  0.008   regulator of G-protein signalling 3 isoform 6 [Homo...
RGS3                  0.008   regulator of G-protein signalling 3 isoform 1 
APBB1IP               0.008   amyloid beta (A4) precursor protein-binding, family ...
CNOT3                 0.008   CCR4-NOT transcription complex, subunit 3 
SCAF1                 0.008   SR-related CTD-associated factor 1 
SFPQ                  0.008   splicing factor proline/glutamine rich (polypyrimidin...
SREBF1                0.008   sterol regulatory element binding transcription fact...
RANBP9                0.008   RAN binding protein 9 
SREBF1                0.007   sterol regulatory element binding transcription fact...
LOC100131102          0.007   PREDICTED: hypothetical protein 
MEX3D                 0.007   ring finger and KH domain containing 1 
DNM3                  0.006   dynamin 3 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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