Guide to the Human Genome
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Name: AP4B1 Sequence: fasta or formatted (739aa) NCBI GI: 166197671
Description:

adaptor-related protein complex 4, beta 1 subunit

Referenced in:

ER, Golgi, and the Secretory Pathway

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         49           2
 C cysteine            3.2         24           1
 D aspartate           4.9         36           2
 E glutamate           7.4         55           3
 F phenylalanine       3.1         23           2
 G glycine             5.0         37           2
 H histidine           2.2         16           2
 I isoleucine          4.7         35           1
 K lysine              4.9         36           2
 L leucine            13.5        100           3
 M methionine          2.7         20           1
 N asparagine          3.4         25           1
 P proline             5.0         37           1
 Q glutamine           5.1         38           2
 R arginine            5.3         39           2
 S serine              6.2         46           3
 T threonine           4.1         30           2
 V valine              8.4         62           3
 W tryptophan          1.1          8           1
 Y tyrosine            3.1         23           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   adaptor-related protein complex 4, beta 1 subunit [... 
AP2B1                 0.189   adaptor-related protein complex 2, beta 1 subunit is...
AP2B1                 0.189   adaptor-related protein complex 2, beta 1 subunit iso...
AP1B1                 0.186   adaptor-related protein complex 1 beta 1 subunit iso...
AP1B1                 0.186   adaptor-related protein complex 1 beta 1 subunit iso...
AP3B2                 0.106   adaptor-related protein complex 3, beta 2 subunit [H...
AP3B1                 0.096   adaptor-related protein complex 3, beta 1 subunit [H...
COPG2                 0.030   coatomer protein complex, subunit gamma 2 
COPG                  0.022   coatomer protein complex, subunit gamma 1 
AP1G2                 0.018   adaptor-related protein complex 1, gamma 2 subunit [H...
AP3D1                 0.016   adaptor-related protein complex 3, delta 1 subunit ...
COPB1                 0.013   coatomer protein complex, subunit beta 1 
COPB1                 0.013   coatomer protein complex, subunit beta 1 
COPB1                 0.013   coatomer protein complex, subunit beta 1 
AP1G1                 0.012   adaptor-related protein complex 1, gamma 1 subunit i...
AP1G1                 0.011   adaptor-related protein complex 1, gamma 1 subunit i...
AP2A2                 0.011   adaptor-related protein complex 2, alpha 2 subunit [...
AP3D1                 0.007   adaptor-related protein complex 3, delta 1 subunit ...
PIK3CA                0.005   phosphoinositide-3-kinase, catalytic, alpha polypept...
FBXL20                0.005   F-box and leucine-rich repeat protein 20 
RAB11FIP3             0.004   rab11-family interacting protein 3 isoform 2 
RAB11FIP3             0.004   rab11-family interacting protein 3 isoform 1 
RANBP6                0.004   RAN binding protein 6 
AP2A1                 0.004   adaptor-related protein complex 2, alpha 1 subunit i...
AP2A1                 0.004   adaptor-related protein complex 2, alpha 1 subunit i...
HEATR6                0.004   HEAT repeat containing 6 
APOH                  0.004   apolipoprotein H precursor 
STOX2                 0.004   storkhead box 2 
JUP                   0.003   junction plakoglobin 
JUP                   0.003   junction plakoglobin 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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