Guide to the Human Genome
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Name: CA2 Sequence: fasta or formatted (260aa) NCBI GI: 4557395
Description:

carbonic anhydrase II

Referenced in:

Carbonic Anhydrases
Lung

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0         13           2
 C cysteine            0.4          1           1
 D aspartate           7.3         19           2
 E glutamate           5.0         13           2
 F phenylalanine       4.6         12           1
 G glycine             8.5         22           2
 H histidine           4.6         12           2
 I isoleucine          3.5          9           1
 K lysine              9.2         24           3
 L leucine            10.0         26           2
 M methionine          0.8          2           1
 N asparagine          3.8         10           2
 P proline             6.5         17           2
 Q glutamine           4.2         11           2
 R arginine            2.7          7           1
 S serine              6.9         18           2
 T threonine           4.6         12           2
 V valine              6.5         17           2
 W tryptophan          2.7          7           1
 Y tyrosine            3.1          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   carbonic anhydrase II 
CA13                  0.587   carbonic anhydrase XIII 
CA3                   0.581   carbonic anhydrase III 
CA1                   0.570   carbonic anhydrase I 
CA1                   0.570   carbonic anhydrase I 
CA1                   0.570   carbonic anhydrase I 
CA1                   0.570   carbonic anhydrase I 
CA7                   0.553   carbonic anhydrase VII isoform 1 
CA5B                  0.493   carbonic anhydrase VB, mitochondrial precursor 
CA5A                  0.457   carbonic anhydrase VA, mitochondrial precursor 
CA7                   0.423   carbonic anhydrase VII isoform 2 
CA8                   0.335   carbonic anhydrase VIII 
CA14                  0.260   carbonic anhydrase XIV precursor 
CA12                  0.247   carbonic anhydrase XII isoform 2 precursor 
CA12                  0.247   carbonic anhydrase XII isoform 1 precursor 
CA6                   0.241   carbonic anhydrase VI precursor 
CA9                   0.229   carbonic anhydrase IX precursor 
CA10                  0.216   carbonic anhydrase X 
CA10                  0.216   carbonic anhydrase X 
CA10                  0.216   carbonic anhydrase X 
CA11                  0.210   carbonic anhydrase XI precursor 
CA4                   0.187   carbonic anhydrase IV precursor 
PTPRZ1                0.164   protein tyrosine phosphatase, receptor-type, zeta1 p...
PTPRG                 0.161   protein tyrosine phosphatase, receptor type, G prec...
LOC402036             0.027   PREDICTED: similar to hCG1646661 
LOC402036             0.027   PREDICTED: similar to hCG1646661 
LOC402036             0.027   PREDICTED: similar to hCG1646661 
LOC440795             0.023   PREDICTED: similar to hCG1646661 
LOC645390             0.021   PREDICTED: similar to hCG1646661 
YTHDC2                0.011   YTH domain containing 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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