Guide to the Human Genome
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Name: CA1 Sequence: fasta or formatted (261aa) NCBI GI: 192447434
Description:

carbonic anhydrase I

Referenced in:

Carbonic Anhydrases

Other entries for this name:
alt mRNA [261aa] carbonic anhydrase I
alt mRNA [261aa] carbonic anhydrase I
alt mRNA [261aa] carbonic anhydrase I
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.3         19           2
 C cysteine            0.4          1           1
 D aspartate           5.4         14           2
 E glutamate           5.0         13           1
 F phenylalanine       4.2         11           1
 G glycine             6.1         16           2
 H histidine           4.2         11           1
 I isoleucine          3.8         10           2
 K lysine              6.9         18           1
 L leucine             7.7         20           2
 M methionine          1.1          3           1
 N asparagine          6.5         17           2
 P proline             6.5         17           2
 Q glutamine           3.4          9           1
 R arginine            2.7          7           1
 S serine             11.5         30           2
 T threonine           5.4         14           1
 V valine              6.5         17           1
 W tryptophan          2.3          6           1
 Y tyrosine            3.1          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   carbonic anhydrase I 
CA1                   1.000   carbonic anhydrase I 
CA1                   1.000   carbonic anhydrase I 
CA1                   1.000   carbonic anhydrase I 
CA13                  0.612   carbonic anhydrase XIII 
CA2                   0.579   carbonic anhydrase II 
CA3                   0.538   carbonic anhydrase III 
CA7                   0.515   carbonic anhydrase VII isoform 1 
CA5B                  0.449   carbonic anhydrase VB, mitochondrial precursor 
CA5A                  0.429   carbonic anhydrase VA, mitochondrial precursor 
CA7                   0.412   carbonic anhydrase VII isoform 2 
CA8                   0.332   carbonic anhydrase VIII 
CA12                  0.270   carbonic anhydrase XII isoform 2 precursor 
CA12                  0.270   carbonic anhydrase XII isoform 1 precursor 
CA14                  0.237   carbonic anhydrase XIV precursor 
CA9                   0.216   carbonic anhydrase IX precursor 
CA6                   0.214   carbonic anhydrase VI precursor 
CA10                  0.210   carbonic anhydrase X 
CA10                  0.210   carbonic anhydrase X 
CA10                  0.210   carbonic anhydrase X 
PTPRZ1                0.198   protein tyrosine phosphatase, receptor-type, zeta1 p...
CA11                  0.179   carbonic anhydrase XI precursor 
CA4                   0.157   carbonic anhydrase IV precursor 
PTPRG                 0.146   protein tyrosine phosphatase, receptor type, G prec...
LOC402036             0.021   PREDICTED: similar to hCG1646661 
LOC402036             0.021   PREDICTED: similar to hCG1646661 
LOC402036             0.021   PREDICTED: similar to hCG1646661 
SLC24A1               0.008   solute carrier family 24 (sodium/potassium/calcium ex...
ANKRD28               0.008   ankyrin repeat domain 28 
PRAGMIN               0.008   pragmin 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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