Guide to the Human Genome
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Name: CA11 Sequence: fasta or formatted (328aa) NCBI GI: 9951923
Description:

carbonic anhydrase XI precursor

Referenced in:

Carbonic Anhydrases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.9         26           3
 C cysteine            0.9          3           1
 D aspartate           3.7         12           1
 E glutamate           3.4         11           1
 F phenylalanine       4.6         15           1
 G glycine             8.2         27           2
 H histidine           3.4         11           1
 I isoleucine          3.4         11           1
 K lysine              1.5          5           1
 L leucine            14.0         46           2
 M methionine          0.6          2           1
 N asparagine          5.5         18           1
 P proline             8.5         28           2
 Q glutamine           4.0         13           1
 R arginine            8.2         27           2
 S serine              9.1         30           1
 T threonine           3.4         11           1
 V valine              5.2         17           2
 W tryptophan          1.8          6           2
 Y tyrosine            2.7          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   carbonic anhydrase XI precursor 
CA10                  0.523   carbonic anhydrase X 
CA10                  0.523   carbonic anhydrase X 
CA10                  0.523   carbonic anhydrase X 
CA2                   0.170   carbonic anhydrase II 
CA13                  0.160   carbonic anhydrase XIII 
CA5A                  0.157   carbonic anhydrase VA, mitochondrial precursor 
CA5B                  0.150   carbonic anhydrase VB, mitochondrial precursor 
CA8                   0.148   carbonic anhydrase VIII 
CA3                   0.147   carbonic anhydrase III 
CA7                   0.145   carbonic anhydrase VII isoform 1 
CA1                   0.142   carbonic anhydrase I 
CA1                   0.142   carbonic anhydrase I 
CA1                   0.142   carbonic anhydrase I 
CA1                   0.142   carbonic anhydrase I 
CA14                  0.123   carbonic anhydrase XIV precursor 
CA7                   0.123   carbonic anhydrase VII isoform 2 
CA12                  0.111   carbonic anhydrase XII isoform 2 precursor 
CA12                  0.111   carbonic anhydrase XII isoform 1 precursor 
CA9                   0.108   carbonic anhydrase IX precursor 
CA6                   0.099   carbonic anhydrase VI precursor 
PTPRG                 0.090   protein tyrosine phosphatase, receptor type, G prec...
CA4                   0.077   carbonic anhydrase IV precursor 
PTPRZ1                0.062   protein tyrosine phosphatase, receptor-type, zeta1 p...
LOC402036             0.015   PREDICTED: similar to hCG1646661 
LOC402036             0.015   PREDICTED: similar to hCG1646661 
LOC402036             0.015   PREDICTED: similar to hCG1646661 
LOC645390             0.012   PREDICTED: similar to hCG1646661 
LOC440795             0.012   PREDICTED: similar to hCG1646661 
HCN1                  0.011   hyperpolarization activated cyclic nucleotide-gated...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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