Guide to the Human Genome
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Name: CA10 Sequence: fasta or formatted (328aa) NCBI GI: 130979679
Description:

carbonic anhydrase X

Referenced in:

Carbonic Anhydrases

Other entries for this name:
alt mRNA [328aa] carbonic anhydrase X
alt mRNA [328aa] carbonic anhydrase X
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.0         10           2
 C cysteine            1.5          5           1
 D aspartate           2.7          9           1
 E glutamate           5.5         18           2
 F phenylalanine       4.3         14           1
 G glycine             5.5         18           2
 H histidine           3.0         10           1
 I isoleucine          7.0         23           2
 K lysine              3.7         12           1
 L leucine             9.8         32           2
 M methionine          3.0         10           1
 N asparagine          8.2         27           2
 P proline             5.2         17           2
 Q glutamine           5.2         17           2
 R arginine            5.2         17           1
 S serine              9.5         31           2
 T threonine           5.2         17           1
 V valine              6.7         22           3
 W tryptophan          2.1          7           2
 Y tyrosine            3.7         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   carbonic anhydrase X 
CA10                  1.000   carbonic anhydrase X 
CA10                  1.000   carbonic anhydrase X 
CA11                  0.522   carbonic anhydrase XI precursor 
CA7                   0.188   carbonic anhydrase VII isoform 1 
CA13                  0.179   carbonic anhydrase XIII 
CA5A                  0.176   carbonic anhydrase VA, mitochondrial precursor 
CA2                   0.174   carbonic anhydrase II 
CA5B                  0.169   carbonic anhydrase VB, mitochondrial precursor 
CA8                   0.168   carbonic anhydrase VIII 
CA3                   0.168   carbonic anhydrase III 
CA1                   0.166   carbonic anhydrase I 
CA1                   0.166   carbonic anhydrase I 
CA1                   0.166   carbonic anhydrase I 
CA1                   0.166   carbonic anhydrase I 
CA7                   0.159   carbonic anhydrase VII isoform 2 
CA12                  0.153   carbonic anhydrase XII isoform 2 precursor 
CA12                  0.153   carbonic anhydrase XII isoform 1 precursor 
CA14                  0.142   carbonic anhydrase XIV precursor 
CA6                   0.120   carbonic anhydrase VI precursor 
CA9                   0.114   carbonic anhydrase IX precursor 
PTPRG                 0.111   protein tyrosine phosphatase, receptor type, G prec...
CA4                   0.109   carbonic anhydrase IV precursor 
PTPRZ1                0.092   protein tyrosine phosphatase, receptor-type, zeta1 p...
LOC402036             0.023   PREDICTED: similar to hCG1646661 
LOC402036             0.023   PREDICTED: similar to hCG1646661 
LOC402036             0.023   PREDICTED: similar to hCG1646661 
LOC440795             0.022   PREDICTED: similar to hCG1646661 
LOC645390             0.022   PREDICTED: similar to hCG1646661 
ARG2                  0.011   arginase 2 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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