Guide to the Human Genome
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Name: CA7 Sequence: fasta or formatted (208aa) NCBI GI: 62240989
Description:

carbonic anhydrase VII isoform 2

Referenced in:

Carbonic Anhydrases

Other entries for this name:
alt prot [264aa] carbonic anhydrase VII isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.8         10           2
 C cysteine            1.4          3           1
 D aspartate           5.3         11           2
 E glutamate           5.3         11           1
 F phenylalanine       6.2         13           1
 G glycine             7.2         15           2
 H histidine           4.8         10           1
 I isoleucine          2.4          5           1
 K lysine              5.8         12           2
 L leucine             8.2         17           2
 M methionine          2.4          5           1
 N asparagine          3.8          8           2
 P proline             6.7         14           2
 Q glutamine           2.4          5           1
 R arginine            5.8         12           1
 S serine              9.1         19           1
 T threonine           6.2         13           2
 V valine              7.7         16           2
 W tryptophan          1.9          4           1
 Y tyrosine            2.4          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   carbonic anhydrase VII isoform 2 
CA7                   1.000   carbonic anhydrase VII isoform 1 
CA13                  0.536   carbonic anhydrase XIII 
CA2                   0.536   carbonic anhydrase II 
CA5B                  0.529   carbonic anhydrase VB, mitochondrial precursor 
CA1                   0.515   carbonic anhydrase I 
CA1                   0.515   carbonic anhydrase I 
CA1                   0.515   carbonic anhydrase I 
CA1                   0.515   carbonic anhydrase I 
CA3                   0.507   carbonic anhydrase III 
CA5A                  0.495   carbonic anhydrase VA, mitochondrial precursor 
CA8                   0.376   carbonic anhydrase VIII 
CA12                  0.277   carbonic anhydrase XII isoform 2 precursor 
CA12                  0.277   carbonic anhydrase XII isoform 1 precursor 
CA14                  0.262   carbonic anhydrase XIV precursor 
CA9                   0.255   carbonic anhydrase IX precursor 
CA10                  0.250   carbonic anhydrase X 
CA10                  0.250   carbonic anhydrase X 
CA10                  0.250   carbonic anhydrase X 
CA6                   0.248   carbonic anhydrase VI precursor 
CA4                   0.211   carbonic anhydrase IV precursor 
PTPRG                 0.199   protein tyrosine phosphatase, receptor type, G prec...
CA11                  0.194   carbonic anhydrase XI precursor 
PTPRZ1                0.180   protein tyrosine phosphatase, receptor-type, zeta1 p...
LOC402036             0.029   PREDICTED: similar to hCG1646661 
LOC402036             0.029   PREDICTED: similar to hCG1646661 
LOC402036             0.029   PREDICTED: similar to hCG1646661 
LOC440795             0.024   PREDICTED: similar to hCG1646661 
LOC645390             0.024   PREDICTED: similar to hCG1646661 
MUC12                 0.017   PREDICTED: mucin 12 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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