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Search of human proteins with 45545409
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|45545409 F-box protein 38 isoform b [Homo sapiens]
(1188 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|45545409 F-box protein 38 isoform b [Homo sapiens] 2424 0.0
gi|45505155 F-box protein 38 isoform a [Homo sapiens] 1710 0.0
gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens] 67 1e-10
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens] 43 0.002
gi|239755326 PREDICTED: hypothetical protein [Homo sapiens] 43 0.002
gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo sa... 42 0.003
gi|126362967 Nck-associated protein 5 isoform 1 [Homo sapiens] 42 0.005
gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens] 42 0.005
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 42 0.005
gi|4504487 histidine rich calcium binding protein precursor [Hom... 41 0.006
gi|28372531 protein phosphatase 4, regulatory subunit 2 [Homo sa... 40 0.010
gi|60097902 filaggrin [Homo sapiens] 40 0.013
gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens] 39 0.023
gi|169173184 PREDICTED: hypothetical protein [Homo sapiens] 39 0.029
gi|42741682 zinc finger protein 265 isoform 2 [Homo sapiens] 39 0.029
gi|4758172 dentin matrix acidic phosphoprotein 1 isoform 1 precu... 39 0.038
gi|121256621 dentin matrix acidic phosphoprotein 1 isoform 2 pre... 39 0.038
gi|207113164 Treacher Collins-Franceschetti syndrome 1 isoform f... 39 0.038
gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e... 39 0.038
gi|207113160 Treacher Collins-Franceschetti syndrome 1 isoform d... 39 0.038
gi|57164975 Treacher Collins-Franceschetti syndrome 1 isoform b ... 39 0.038
gi|57164977 Treacher Collins-Franceschetti syndrome 1 isoform a ... 39 0.038
gi|57164979 Treacher Collins-Franceschetti syndrome 1 isoform c ... 39 0.038
gi|110618248 mucin and cadherin-like isoform 1 [Homo sapiens] 39 0.038
gi|7656879 ALL1 fused gene from 5q31 [Homo sapiens] 38 0.050
gi|33356174 pinin, desmosome associated protein [Homo sapiens] 38 0.066
gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens] 38 0.066
gi|63054848 coiled-coil domain containing 34 isoform 1 [Homo sap... 37 0.086
gi|224548936 hypothetical protein LOC100170229 [Homo sapiens] 37 0.11
gi|239744133 PREDICTED: hypothetical protein [Homo sapiens] 37 0.15
>gi|45545409 F-box protein 38 isoform b [Homo sapiens]
Length = 1188
Score = 2424 bits (6281), Expect = 0.0
Identities = 1188/1188 (100%), Positives = 1188/1188 (100%)
Query: 1 MGPRKKSVKTCIMNNEIPEEMTADETKDYMNQLSHEVLCHIFRYLPLQDIMCMECLSRKL 60
MGPRKKSVKTCIMNNEIPEEMTADETKDYMNQLSHEVLCHIFRYLPLQDIMCMECLSRKL
Sbjct: 1 MGPRKKSVKTCIMNNEIPEEMTADETKDYMNQLSHEVLCHIFRYLPLQDIMCMECLSRKL 60
Query: 61 KEAVTLYLRVVRVVDLCAGRWWEYMPSGFTDASFLTLLKKMPDVEQLYGLHPRYLERRRV 120
KEAVTLYLRVVRVVDLCAGRWWEYMPSGFTDASFLTLLKKMPDVEQLYGLHPRYLERRRV
Sbjct: 61 KEAVTLYLRVVRVVDLCAGRWWEYMPSGFTDASFLTLLKKMPDVEQLYGLHPRYLERRRV 120
Query: 121 RGHEAFSIPGVLEALQACPNLVGVETSHLELVESIWTYMPHVHILGKFRNRNGAFPIPPE 180
RGHEAFSIPGVLEALQACPNLVGVETSHLELVESIWTYMPHVHILGKFRNRNGAFPIPPE
Sbjct: 121 RGHEAFSIPGVLEALQACPNLVGVETSHLELVESIWTYMPHVHILGKFRNRNGAFPIPPE 180
Query: 181 NKLKIPIGAKIQTLHLVGVNVPEIPCIPMLRHLYMKWVRLTKPQPFKDFLCISLRTFVMR 240
NKLKIPIGAKIQTLHLVGVNVPEIPCIPMLRHLYMKWVRLTKPQPFKDFLCISLRTFVMR
Sbjct: 181 NKLKIPIGAKIQTLHLVGVNVPEIPCIPMLRHLYMKWVRLTKPQPFKDFLCISLRTFVMR 240
Query: 241 NCAGPTNSLKYVPLVTGLASARNLEHLEMVRVPFLGGLIQHVVEDSWRSGGFRNLHTIVL 300
NCAGPTNSLKYVPLVTGLASARNLEHLEMVRVPFLGGLIQHVVEDSWRSGGFRNLHTIVL
Sbjct: 241 NCAGPTNSLKYVPLVTGLASARNLEHLEMVRVPFLGGLIQHVVEDSWRSGGFRNLHTIVL 300
Query: 301 GACKNALEVDLGYLIITAARRLHEVRIQPSLTKDGVFSALKMAELEFPQFETLHLGYVDE 360
GACKNALEVDLGYLIITAARRLHEVRIQPSLTKDGVFSALKMAELEFPQFETLHLGYVDE
Sbjct: 301 GACKNALEVDLGYLIITAARRLHEVRIQPSLTKDGVFSALKMAELEFPQFETLHLGYVDE 360
Query: 361 FLLQSRMANADLVKYGLADVVENPGIITDIGMKAVNEVFSCIKYLAIYNCPHLHNPYNWI 420
FLLQSRMANADLVKYGLADVVENPGIITDIGMKAVNEVFSCIKYLAIYNCPHLHNPYNWI
Sbjct: 361 FLLQSRMANADLVKYGLADVVENPGIITDIGMKAVNEVFSCIKYLAIYNCPHLHNPYNWI 420
Query: 421 SDHSRWTRLVDINLVRCHALKLDSFGQFIELLPSLEFISLDQMFREPPKGCARVGLSAGT 480
SDHSRWTRLVDINLVRCHALKLDSFGQFIELLPSLEFISLDQMFREPPKGCARVGLSAGT
Sbjct: 421 SDHSRWTRLVDINLVRCHALKLDSFGQFIELLPSLEFISLDQMFREPPKGCARVGLSAGT 480
Query: 481 GIGVSSALVSNQNSNNDDNNAQNNNANIHDNNHHHPDDSDEENDFRQDLQPGEQQFAADA 540
GIGVSSALVSNQNSNNDDNNAQNNNANIHDNNHHHPDDSDEENDFRQDLQPGEQQFAADA
Sbjct: 481 GIGVSSALVSNQNSNNDDNNAQNNNANIHDNNHHHPDDSDEENDFRQDLQPGEQQFAADA 540
Query: 541 LNEMEDIVQEDGEVVAESGNNTPAHSQAIIPVDVDEEQAGPSGLQRVVKPTSITVHDSES 600
LNEMEDIVQEDGEVVAESGNNTPAHSQAIIPVDVDEEQAGPSGLQRVVKPTSITVHDSES
Sbjct: 541 LNEMEDIVQEDGEVVAESGNNTPAHSQAIIPVDVDEEQAGPSGLQRVVKPTSITVHDSES 600
Query: 601 DDEEDSLELQEVWIPKNGTRRYSEREEKTGESVQSRELSVSGKGKTPLRKRYNSHQMGQS 660
DDEEDSLELQEVWIPKNGTRRYSEREEKTGESVQSRELSVSGKGKTPLRKRYNSHQMGQS
Sbjct: 601 DDEEDSLELQEVWIPKNGTRRYSEREEKTGESVQSRELSVSGKGKTPLRKRYNSHQMGQS 660
Query: 661 KQFPLEESSCEKGCQVTSEQIKADMKAARDIPEKKKNKDVYPSCSSTTASTVGNSSSHNT 720
KQFPLEESSCEKGCQVTSEQIKADMKAARDIPEKKKNKDVYPSCSSTTASTVGNSSSHNT
Sbjct: 661 KQFPLEESSCEKGCQVTSEQIKADMKAARDIPEKKKNKDVYPSCSSTTASTVGNSSSHNT 720
Query: 721 ASQSPDFVRTVNSGGSSEPSPTEVDVSRQCACSPGGSEDSEAMEEGDAESSVCPRCCCHR 780
ASQSPDFVRTVNSGGSSEPSPTEVDVSRQCACSPGGSEDSEAMEEGDAESSVCPRCCCHR
Sbjct: 721 ASQSPDFVRTVNSGGSSEPSPTEVDVSRQCACSPGGSEDSEAMEEGDAESSVCPRCCCHR 780
Query: 781 PQESQRRTSRCSDEERPSTSRACVVNGPDGTRSAFSFRTLPQGGSSGPAHDERTNGSGSG 840
PQESQRRTSRCSDEERPSTSRACVVNGPDGTRSAFSFRTLPQGGSSGPAHDERTNGSGSG
Sbjct: 781 PQESQRRTSRCSDEERPSTSRACVVNGPDGTRSAFSFRTLPQGGSSGPAHDERTNGSGSG 840
Query: 841 ATGEDRRGSSQPESCDVQSNEDYPRRPLTRARSRLSHVLLVSESEVAKTKPRHAMKRKRT 900
ATGEDRRGSSQPESCDVQSNEDYPRRPLTRARSRLSHVLLVSESEVAKTKPRHAMKRKRT
Sbjct: 841 ATGEDRRGSSQPESCDVQSNEDYPRRPLTRARSRLSHVLLVSESEVAKTKPRHAMKRKRT 900
Query: 901 ADKSTSTSDPVIEDDHVQVLVLKSKNLVGVTMTNCGITDLVLKDCPKMMFIHATRCRVLK 960
ADKSTSTSDPVIEDDHVQVLVLKSKNLVGVTMTNCGITDLVLKDCPKMMFIHATRCRVLK
Sbjct: 901 ADKSTSTSDPVIEDDHVQVLVLKSKNLVGVTMTNCGITDLVLKDCPKMMFIHATRCRVLK 960
Query: 961 HLKVENAPIVNRFDYAQCKKLNMDQVLDQILRMPPERNRIIYLRPMQQVDTLTLEQKLFS 1020
HLKVENAPIVNRFDYAQCKKLNMDQVLDQILRMPPERNRIIYLRPMQQVDTLTLEQKLFS
Sbjct: 961 HLKVENAPIVNRFDYAQCKKLNMDQVLDQILRMPPERNRIIYLRPMQQVDTLTLEQKLFS 1020
Query: 1021 GPYPYHICIIHEFSNPPNVRNKVRIRSWMDTIANINQELIKYEFFPEATRSEEDLKKYPK 1080
GPYPYHICIIHEFSNPPNVRNKVRIRSWMDTIANINQELIKYEFFPEATRSEEDLKKYPK
Sbjct: 1021 GPYPYHICIIHEFSNPPNVRNKVRIRSWMDTIANINQELIKYEFFPEATRSEEDLKKYPK 1080
Query: 1081 YPWGREIYTLEGVVDGAPYSMISDFPWLRSLRAAEPNSFARYDFEDDEESTIYAPRRKGQ 1140
YPWGREIYTLEGVVDGAPYSMISDFPWLRSLRAAEPNSFARYDFEDDEESTIYAPRRKGQ
Sbjct: 1081 YPWGREIYTLEGVVDGAPYSMISDFPWLRSLRAAEPNSFARYDFEDDEESTIYAPRRKGQ 1140
Query: 1141 LSADICMETIGEEISEMRQMKKGVFQRVVAIFIHYCDVNGEPVEDDYI 1188
LSADICMETIGEEISEMRQMKKGVFQRVVAIFIHYCDVNGEPVEDDYI
Sbjct: 1141 LSADICMETIGEEISEMRQMKKGVFQRVVAIFIHYCDVNGEPVEDDYI 1188
>gi|45505155 F-box protein 38 isoform a [Homo sapiens]
Length = 1113
Score = 1710 bits (4428), Expect = 0.0
Identities = 907/1202 (75%), Positives = 946/1202 (78%), Gaps = 103/1202 (8%)
Query: 1 MGPRKKSVKTCIMNNEIPEEMTADETKDYMNQLSHEVLCHIFRYLPLQDIMCMECLSRKL 60
MGPRKKSVKTCIMNNEIPEEMTADETKDYMNQLSHEVLCHIFRYLPLQDIMCMECLSRKL
Sbjct: 1 MGPRKKSVKTCIMNNEIPEEMTADETKDYMNQLSHEVLCHIFRYLPLQDIMCMECLSRKL 60
Query: 61 KEAVTLYLRVVRVVDLCAGRWWEYMPSGFTDASFLTLLKKMPDVEQLYGLHPRYLERRRV 120
KEAVTLYLRVVRVVDLCAGRWWEYMPSGFTDASFLTLLKKMPDVEQLYGLHPRYLERRRV
Sbjct: 61 KEAVTLYLRVVRVVDLCAGRWWEYMPSGFTDASFLTLLKKMPDVEQLYGLHPRYLERRRV 120
Query: 121 RGHEAFSIPGVLEALQACPNLVGVETSHLELVESIWTYMPHVHILGKFRNRNGAFPIPPE 180
RGHEAFSIPGVLEALQACPNLVGVETSHLELVESIWTYMPHVHILGKFRNRNGAFPIPPE
Sbjct: 121 RGHEAFSIPGVLEALQACPNLVGVETSHLELVESIWTYMPHVHILGKFRNRNGAFPIPPE 180
Query: 181 NKLKIPIGAKIQTLHLVGVNVPEIPCIPMLRHLYMKWVRLTKPQPFKDFLCISLRTFVMR 240
NKLKIPIGAKIQTLHLVGVNVPEIPCIPMLRHLYMKWVRLTKPQPFKDFLCISLRTFVMR
Sbjct: 181 NKLKIPIGAKIQTLHLVGVNVPEIPCIPMLRHLYMKWVRLTKPQPFKDFLCISLRTFVMR 240
Query: 241 NCAGPTNSLKYVPLVTGLASARNLEHLEMVRVPFLGGLIQHVVEDSWRSGGFRNLHTIVL 300
NCAGPTNSLKYVPLVTGLASARNLEHLEMVRVPFLGGLIQHVVEDSWRSGGFRNLHTIVL
Sbjct: 241 NCAGPTNSLKYVPLVTGLASARNLEHLEMVRVPFLGGLIQHVVEDSWRSGGFRNLHTIVL 300
Query: 301 GACKNALEVDLGYLIITAARRLHEVRIQPSLTKDGVFSALKMAELEFPQFETLHLGYVDE 360
GACKNALEVDLGYLIITAARRLHEVRIQPSLTKDGVFSALKMAELEFPQFETLHLGYVDE
Sbjct: 301 GACKNALEVDLGYLIITAARRLHEVRIQPSLTKDGVFSALKMAELEFPQFETLHLGYVDE 360
Query: 361 FLLQSRMANADLVKYGLADVVENPGIITDIGMKAVNEVFSCIKYLAIYNCPHLHNPYNWI 420
FLLQSRMANADLVKYGLADVVENPGIITDIGMKAVNEVFSCIKYLAIYNCPHLHNPYNWI
Sbjct: 361 FLLQSRMANADLVKYGLADVVENPGIITDIGMKAVNEVFSCIKYLAIYNCPHLHNPYNWI 420
Query: 421 SDHSRWTRLVDINLVRCHALKLDSFGQFIELLPSLEFISLDQMFREPPKGCARVGLSAGT 480
SDHSRWTRLVDINLVRCHALKLDSFGQFIELLPSLEFISLDQMFREPPKGCARVGLSAGT
Sbjct: 421 SDHSRWTRLVDINLVRCHALKLDSFGQFIELLPSLEFISLDQMFREPPKGCARVGLSAGT 480
Query: 481 GIGVSSALVSNQNSNNDDNNAQNNNANIHDNNHHHPDDSDEENDFRQDLQPGEQQFAADA 540
GIGVSSALVSNQNSNNDDNNAQNNNANIHDNNHHHPDDSDEENDFRQDLQPGEQQFAA
Sbjct: 481 GIGVSSALVSNQNSNNDDNNAQNNNANIHDNNHHHPDDSDEENDFRQDLQPGEQQFAA-- 538
Query: 541 LNEMEDIVQEDGEVVAESGNNTPAHSQAIIPVDVDEEQAGPSGLQRVVKPTSITVHDSES 600
D + E ++V E D E SG +I D +
Sbjct: 539 -----DALNEMEDIVQE-----------------DGEVVAESGNNTPAHSQAIIPVDVDE 576
Query: 601 DDEEDSLELQEVWIPKNGTRRYSEREEKTGESVQSRELSVSGKGKTPLRKRYNSHQMGQS 660
+ S LQ V P + T SE +++ +S++ +E+ + G +RY+ +
Sbjct: 577 EQAGPS-GLQRVVKPTSITVHDSESDDEE-DSLELQEVWIPKNGT----RRYSERE---- 626
Query: 661 KQFPLEESSCEKGCQVTSEQIKADMKAARDIPEKKKNKDVYPSCSSTTASTVGNSSSHNT 720
+ T E +++ R++ K K T NS
Sbjct: 627 --------------EKTGESVQS-----RELSVSGKGK--------TPLRKRYNSHQMGQ 659
Query: 721 ASQSPDFVRTVNSGGSSEPSPTEVDVSRQCACSPGGSEDSEAMEEGDAESSVCPRCCCHR 780
+ Q P + G + D+ + + E V P C
Sbjct: 660 SKQFPLEESSCEKGCQVTSEQIKADMKA-----------ARDIPEKKKNKDVYPSC---- 704
Query: 781 PQESQRRTSRCSDEERPSTSRACVVNGPDGTRSAFSFRTLPQGGSSGPAHDE-------- 832
+S + S+S PD R T+ GGSS P+ E
Sbjct: 705 -------SSTTASTVGNSSSHNTASQSPDFVR------TVNSGGSSEPSPTEVDVSRQCA 751
Query: 833 -RTNGSGSGATGE--DRRGSSQPESCDVQSNEDYPR--RPLTRARSRLSHVLLVS-ESEV 886
GS E D S P C + E R R R S +V+ EV
Sbjct: 752 CSPGGSEDSEAMEEGDAESSVCPRCCCHRPQESQRRTSRCSDEERPSTSRACVVNGPDEV 811
Query: 887 AKTKPRHAMKRKRTADKSTSTSDPVIEDDHVQVLVLKSKNLVGVTMTNCGITDLVLKDCP 946
AKTKPRHAMKRKRTADKSTSTSDPVIEDDHVQVLVLKSKNLVGVTMTNCGITDLVLKDCP
Sbjct: 812 AKTKPRHAMKRKRTADKSTSTSDPVIEDDHVQVLVLKSKNLVGVTMTNCGITDLVLKDCP 871
Query: 947 KMMFIHATRCRVLKHLKVENAPIVNRFDYAQCKKLNMDQVLDQILRMPPERNRIIYLRPM 1006
KMMFIHATRCRVLKHLKVENAPIVNRFDYAQCKKLNMDQVLDQILRMPPERNRIIYLRPM
Sbjct: 872 KMMFIHATRCRVLKHLKVENAPIVNRFDYAQCKKLNMDQVLDQILRMPPERNRIIYLRPM 931
Query: 1007 QQVDTLTLEQKLFSGPYPYHICIIHEFSNPPNVRNKVRIRSWMDTIANINQELIKYEFFP 1066
QQVDTLTLEQKLFSGPYPYHICIIHEFSNPPNVRNKVRIRSWMDTIANINQELIKYEFFP
Sbjct: 932 QQVDTLTLEQKLFSGPYPYHICIIHEFSNPPNVRNKVRIRSWMDTIANINQELIKYEFFP 991
Query: 1067 EATRSEEDLKKYPKYPWGREIYTLEGVVDGAPYSMISDFPWLRSLRAAEPNSFARYDFED 1126
EATRSEEDLKKYPKYPWGREIYTLEGVVDGAPYSMISDFPWLRSLRAAEPNSFARYDFED
Sbjct: 992 EATRSEEDLKKYPKYPWGREIYTLEGVVDGAPYSMISDFPWLRSLRAAEPNSFARYDFED 1051
Query: 1127 DEESTIYAPRRKGQLSADICMETIGEEISEMRQMKKGVFQRVVAIFIHYCDVNGEPVEDD 1186
DEESTIYAPRRKGQLSADICMETIGEEISEMRQMKKGVFQRVVAIFIHYCDVNGEPVEDD
Sbjct: 1052 DEESTIYAPRRKGQLSADICMETIGEEISEMRQMKKGVFQRVVAIFIHYCDVNGEPVEDD 1111
Query: 1187 YI 1188
YI
Sbjct: 1112 YI 1113
>gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens]
Length = 1301
Score = 66.6 bits (161), Expect = 1e-10
Identities = 77/390 (19%), Positives = 146/390 (37%), Gaps = 23/390 (5%)
Query: 478 AGTGIGVSSALVSNQNSNNDDNNAQNNNANIHDNNHHHPDDSDEENDFRQDLQPGEQQFA 537
+G G SS S+ +SN+ D++ +++ + N+ D SD ++ D + +
Sbjct: 542 SGKGKSDSSDSDSSDSSNSSDSSDSSDSDSSDSNSSSDSDSSDSDSSDSSDSDSSDSSNS 601
Query: 538 ADALNEMEDIVQED----GEVVAESGNNTPAHSQAIIPVDVDEEQAGPSGLQRVVKPTSI 593
+D+ + + D + ++S + S + D + + S +S
Sbjct: 602 SDSSDSSDSSDSSDSSDSSDSKSDSSKSESDSSDSDSKSDSSDSNSSDSSDNSDSSDSSN 661
Query: 594 TVHDSESDDEEDSLELQEVWIPKNGT-RRYSEREEKTGESVQSRELSVSGKGKTPLRKRY 652
+ + S+S D DS + N + S + ES S + S S +
Sbjct: 662 SSNSSDSSDSSDSSDSSSSSDSSNSSDSSDSSDSSNSSESSDSSDSSDSDSSDSSDSSNS 721
Query: 653 NSHQMGQSKQFPLEESSCEKGCQVTSEQIKADMKAARDIPEKKKNKDVYPSCSSTTASTV 712
NS S +SS +S+ ++ + D + + D S S+ +S
Sbjct: 722 NSSDSDSSNSSDSSDSSNSSDSSDSSD--SSNSSDSSDSSDSSNSSDSSDSSDSSDSSDS 779
Query: 713 GNSSSHNTASQSPDFVRTVNSGGSSEPSPTEVDVSRQCACSPGGSEDSEAMEEGDAESSV 772
NSS N +S S D + NS SS S + + S S+ S + + D+ +S
Sbjct: 780 SNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSDSSNSSDSSNSSDSSDSSNS- 838
Query: 773 CPRCCCHRPQESQRRTSRCSDEERPSTSRACVVNGPDGTRSAFSFRTLPQGGSSGPAHDE 832
+S + + S++R+ N D + S+ S SS +
Sbjct: 839 ---------SDSSDSSDSSDGSDSDSSNRSDSSNSSDSSDSSDS------SNSSDSSDSS 883
Query: 833 RTNGSGSGATGEDRRGSSQPESCDVQSNED 862
+N S + + D SS +S D ++ D
Sbjct: 884 DSNESSNSSDSSDSSNSSDSDSSDSSNSSD 913
Score = 59.7 bits (143), Expect = 2e-08
Identities = 71/385 (18%), Positives = 137/385 (35%), Gaps = 24/385 (6%)
Query: 491 NQNSNNDDNNAQNNNANIHDNNHHHPDDSDEENDF--RQDLQPGEQQFAADALNEMEDIV 548
N N+ NDDN+ ++ D++ DS +D D + ++D+ + D
Sbjct: 529 NGNNGNDDNDKSDSGKGKSDSSDSDSSDSSNSSDSSDSSDSDSSDSNSSSDSDSSDSDSS 588
Query: 549 QEDGEVVAESGNNTPAHSQAIIPVDVDEEQAGPSGLQRVVKPTSITVHDSESDDEE---- 604
++S N++ + + D + S + + DS+SD +
Sbjct: 589 DSSDSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSKSDSSKSESDSSDSDSKSDSSDSNSS 648
Query: 605 DSLELQEVWIPKNGTRRYSEREEKTGESVQSRELSVSGKGKTPLRKRYNSHQMGQSKQFP 664
DS + + N + + S S + + NS + S
Sbjct: 649 DSSDNSDSSDSSNSSNSSDSSDSSDSSDSSSSSDSSNSSDSSDSSDSSNSSESSDSSDSS 708
Query: 665 LEESSCEKGCQVTSEQIKADMKAARDIPEKKKNKDVYPSCSSTTASTVGNSSSHNTASQS 724
+SS + S +D + D + + D S S+ +S +SS + +S S
Sbjct: 709 DSDSS-DSSDSSNSNSSDSDSSNSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSNSSDS 767
Query: 725 PDFVRTVNSGGSSEPS-------PTEVDVSRQCACSPGGSEDSEAMEEGDAESSVCPRCC 777
D + +S SS S ++ S + S S+ S++ + D++SS
Sbjct: 768 SDSSDSSDSSDSSNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSDSS------ 821
Query: 778 CHRPQESQRRTSRCSDEERPSTSRACVVNGPDGTRSAFSFRTLPQGGSSGPAHDERTNGS 837
S S S + S+ + + DG+ S S R+ S + +N S
Sbjct: 822 ----NSSDSSNSSDSSDSSNSSDSSDSSDSSDGSDSDSSNRSDSSNSSDSSDSSDSSNSS 877
Query: 838 GSGATGEDRRGSSQPESCDVQSNED 862
S + + S+ +S D ++ D
Sbjct: 878 DSSDSSDSNESSNSSDSSDSSNSSD 902
Score = 58.2 bits (139), Expect = 5e-08
Identities = 73/378 (19%), Positives = 142/378 (37%), Gaps = 16/378 (4%)
Query: 490 SNQNSNNDDNNAQNNNA---NIHDNNHHHPDDSDEENDFRQDLQPGEQQFAADALNEMED 546
SN++SN+ D++ +N++ + +N DS +D + + ++D+ N +
Sbjct: 885 SNESSNSSDSSDSSNSSDSDSSDSSNSSDSSDSSNSSDSSESSNSSDNSNSSDSSNSSDS 944
Query: 547 IVQEDGEVVAESGNNTPAHSQAIIPVDVDEEQAGPSGLQRVVKPTSITVHDSESDDEEDS 606
D ++S N++ + + + D + + S +S + S+S D DS
Sbjct: 945 SDSSDSSNSSDSSNSSDSSNSS----DSSDSNSSDSSDSSNSSDSSDSSDSSDSSDSSDS 1000
Query: 607 LELQEVWIPKNGTRRYSEREEKTGESVQSRELSVSGKGKTPLRKRYNSHQMGQSKQFPLE 666
+ + S + +S S + S S +S S
Sbjct: 1001 SNSSD-----SSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSS 1055
Query: 667 ESSCEKGCQVTSEQI-KADMKAARDIPEKKKNKDVYPSCSSTTASTVGNSSSHNTASQSP 725
SS +S+ +D + D E + D S S+ +S +SS + +S S
Sbjct: 1056 NSSDSSDSSDSSDSSDSSDSSDSSDSSESSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSS 1115
Query: 726 DFVRTVNSGGSSEPS-PTEVDVSRQCACSPGGSEDSEAMEEGDAESSVCPRCCCHRPQES 784
D + NS SS+ S ++ S + S SE S++ + D+ S S
Sbjct: 1116 DSSDSSNSSDSSDSSDSSDSSDSSNSSDSSDSSESSDSSDSSDSSDSSDSSDSSDSSDSS 1175
Query: 785 QRRTSRCSDEERPSTSRACVVNGPDGTRSAFSFRTLPQGGSSGPAHDERTNGSGSGATGE 844
S S + S+ + + D + S+ S + SS + + ++ S S + E
Sbjct: 1176 DSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSS--DSSDSSDSSDSNE 1233
Query: 845 DRRGSSQPESCDVQSNED 862
S +S D ++ D
Sbjct: 1234 SSDSSDSSDSSDSSNSSD 1251
Score = 57.0 bits (136), Expect = 1e-07
Identities = 75/385 (19%), Positives = 146/385 (37%), Gaps = 16/385 (4%)
Query: 485 SSALVSNQNSNNDDNNAQNNNANIHD--------NNHHHPDDSDEENDFRQDLQPGEQQF 536
S++ S+++SN+ DN+ ++++N D N+ + SD N D
Sbjct: 918 SNSSDSSESSNSSDNSNSSDSSNSSDSSDSSDSSNSSDSSNSSDSSNS--SDSSDSNSSD 975
Query: 537 AADALNEMEDIVQEDGEVVAESGNNTPAHSQAIIPVDVDEEQAGPSGLQRVVKPTSITVH 596
++D+ N + D ++S +++ + + D + S +S +
Sbjct: 976 SSDSSNSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSNSSDSSNSSDSSNSSDSSD 1035
Query: 597 DSESDDEEDSLELQEVWIPKNGTRRYSEREEKTGESVQSRELSVSGKGKTPLRKRYNSHQ 656
S+S D DS + + N + S + +S S + S S +S+
Sbjct: 1036 SSDSSDSSDSSDSSDSSDSSNSSD--SSDSSDSSDSSDSSDSSDSSDSSESSDSSDSSNS 1093
Query: 657 MGQSKQFPLEESSCEKGCQVTSEQIKADMKAARDIPEKKKNKDVYPSCSSTTASTVGNSS 716
S +SS +S+ +D + D + + D S +S+ +S SS
Sbjct: 1094 SDSSDSSDSSDSSDSSDSSDSSD--SSDSSNSSDSSDSSDSSDSSDSSNSSDSSDSSESS 1151
Query: 717 SHNTASQSPDFVRTVNSGGSSEPS-PTEVDVSRQCACSPGGSEDSEAMEEGDAESSVCPR 775
+ +S S D + +S SS+ S + S + S S+ S++ + D+ S
Sbjct: 1152 DSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSS 1211
Query: 776 CCCHRPQESQRRTSRCSDEERPSTSRACVVNGPDGTRSAFSFRTLPQGGSSGPAHDERTN 835
S S S + S+ + + D + S+ S + S+ ++DE +
Sbjct: 1212 DSSDSSDSSDSSDSSDSSDSNESSDSSDSSDSSDSSNSSDSSDSSDSSDSTSDSNDESDS 1271
Query: 836 GSGSGATGEDRRGSSQPESCDVQSN 860
S SG G + S +S SN
Sbjct: 1272 QSKSG-NGNNNGSDSDSDSEGSDSN 1295
Score = 55.5 bits (132), Expect = 3e-07
Identities = 71/384 (18%), Positives = 141/384 (36%), Gaps = 36/384 (9%)
Query: 479 GTGIGVSSALVSNQNSNNDDNNAQNNNANIHDNNHHHPDDSDEENDFRQDLQPGEQQFAA 538
G G A + +S +D NN+ +N N ++ +D ++++D + ++
Sbjct: 502 GNGSDSKGAEDDDSDSTSDTNNSDSN------GNGNNGNDDNDKSDSGKGKSDSSDSDSS 555
Query: 539 DALNEMEDIVQEDGEVVAESGNNTPAHSQAIIPVDVDEEQAGPSGLQRVVKPTSITVHDS 598
D+ N + D + ++S +++ + S D + + S +S + S
Sbjct: 556 DSSNSSDSSDSSDSD-SSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSSDSS 614
Query: 599 ESDDEEDSLELQEVWIPKNGTRRYSEREEKTGESVQSRELSVSGKGKTPLRKRYNSHQMG 658
+S D DS + ++ S+ + +S S S + NS
Sbjct: 615 DSSDSSDS--------KSDSSKSESDSSDSDSKSDSSDSNSSDSSDNSDSSDSSNSSNSS 666
Query: 659 QSKQFPLEESSCEKGCQVTSEQIKADMKAARDIPEKKKNKDVYPSCSSTTASTVGNSSSH 718
S + S ++ +D + + E + D S SS ++ + ++SS
Sbjct: 667 DSSD-SSDSSDSSSSSDSSNSSDSSDSSDSSNSSESSDSSDSSDSDSSDSSDSSNSNSSD 725
Query: 719 NTASQSPDFVRTVNSGGSSEPSPTEVDVSRQCACSPGGSEDSEAMEEGDAESSVCPRCCC 778
+ +S S D + NS SS+ S S + S S+ S + + D+ S
Sbjct: 726 SDSSNSSDSSDSSNSSDSSDSSD-----SSNSSDSSDSSDSSNSSDSSDSSDS------- 773
Query: 779 HRPQESQRRTSRCSDEERPSTSRACVVNGPDGTRSAFSFRTLPQGGSSGPAHDERTNGSG 838
+S SD S S + D + S+ S + SS + + +N S
Sbjct: 774 ----SDSSDSSNSSDSNDSSNSS----DSSDSSNSSDSSNSSDSSDSSDSSDSDSSNSSD 825
Query: 839 SGATGEDRRGSSQPESCDVQSNED 862
S + + S+ +S D + D
Sbjct: 826 SSNSSDSSDSSNSSDSSDSSDSSD 849
Score = 53.9 bits (128), Expect = 9e-07
Identities = 71/369 (19%), Positives = 137/369 (37%), Gaps = 30/369 (8%)
Query: 493 NSNNDDNNAQNNNANIHDNNHHHPDDSDEENDFRQDLQPGEQQFAADALNEMEDIVQEDG 552
N N+D N+ +NN++ + ++ D+S ++N D + E D + D D
Sbjct: 472 NGNDDANSESDNNSSSRGDASYNSDES-KDNGNGSDSKGAED----DDSDSTSDTNNSDS 526
Query: 553 EVVAESGNNTPAHSQAIIPVDVDEEQAGPSGLQRVVKPTSITVHDSESDDEEDSLELQEV 612
+GN+ D D+ +G +S + + S+S D DS
Sbjct: 527 NGNGNNGND-----------DNDKSDSGKGKSDSSDSDSSDSSNSSDSSDSSDS------ 569
Query: 613 WIPKNGTRRYSEREEKTGESVQSRELSVSGKGKTPLRKRYNSHQMGQSKQFPLEESSCEK 672
+ + S+ + +S S + S + +S S +SS K
Sbjct: 570 --DSSDSNSSSDSDSSDSDSSDSSDSDSSDSSNS----SDSSDSSDSSDSSDSSDSSDSK 623
Query: 673 GCQVTSEQIKADMKAARDIPEKKKNKDVYPSCSSTTASTVGNSSSHNTASQSPDFVRTVN 732
SE +D + D + + D + S+ +S NSS + +S S D + +
Sbjct: 624 SDSSKSESDSSDSDSKSDSSD-SNSSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSSSSSD 682
Query: 733 SGGSSEPSPTEVDVSRQCACSPGGSEDSEAMEEGD-AESSVCPRCCCHRPQESQRRTSRC 791
S SS+ S + + + S DS++ + D + S+ + S S
Sbjct: 683 SSNSSDSSDSSDSSNSSESSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSNSSD 742
Query: 792 SDEERPSTSRACVVNGPDGTRSAFSFRTLPQGGSSGPAHDERTNGSGSGATGEDRRGSSQ 851
S + S++ + + D + S+ S + SS ++ +N S + + D SS
Sbjct: 743 SSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSSDSSNSSD 802
Query: 852 PESCDVQSN 860
+ S+
Sbjct: 803 SSNSSDSSD 811
>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
Length = 2400
Score = 43.1 bits (100), Expect = 0.002
Identities = 43/178 (24%), Positives = 68/178 (38%), Gaps = 25/178 (14%)
Query: 703 SCSSTTASTVGNSSSHNTASQSPDFVRTVNSGGSSEPSPTEVDVSRQCACSPGGSEDSEA 762
SCS + A+++G + SP ++ P V R CS G++ ++
Sbjct: 783 SCSKSGAASLGEEARDTPQPSSPLVLQV------GRPEQGAVGPHRSHCCSQPGTQPAQE 836
Query: 763 MEEGDAESS--VCPRCCCHRPQES---QRRTSRCSD--EERPSTSRACVVNGPDGTRS-- 813
+ G + + +C R C P+ QRR+S C ST+R + +GTR
Sbjct: 837 AQRGPSPEASWLCGRYCPTPPRGRPCPQRRSSSCGSTGSSHQSTARGPGGSPQEGTRQPG 896
Query: 814 ----------AFSFRTLPQGGSSGPAHDERTNGSGSGATGEDRRGSSQPESCDVQSNE 861
A + QG S +E+T SG G G++ P S S E
Sbjct: 897 PTPSPGPNSGASRRSSASQGAGSRGLSEEKTLRSGGGPQGQEEASGVSPSSLPRSSPE 954
Score = 35.4 bits (80), Expect = 0.33
Identities = 78/370 (21%), Positives = 123/370 (33%), Gaps = 41/370 (11%)
Query: 516 PDDSDEENDFRQDLQPGEQQFAADALNEMEDIVQEDGEVVAESGNNTPAHSQAIIPVDVD 575
P+ E + ++ QP A +E E+ + +GE G+ P P +
Sbjct: 2003 PEAEGEMQEAEEEAQPESDGVEAQPKSEGEEAQEVEGETQKTEGDAQPESDGVEAPEAEE 2062
Query: 576 EEQAGPSGLQRV---VKPTSITVHDSESDDEEDSLELQEVWIPKNGTRRYSEREEKTGES 632
E Q +Q P S V D++ + E E + V P+ +E E + E
Sbjct: 2063 EAQEAEGEVQEAEGEAHPESEDV-DAQEAEGEAQPESEGVEAPE------AEGEAQKAEG 2115
Query: 633 VQSRELSVSGKGKTPLRKRYNSHQMGQSKQFPLEESSCEKGCQVTSEQIKADMKAARDIP 692
+++ E + ++ + + Q + +E E Q SE I+A P
Sbjct: 2116 IEAPETEGEAQPESEGIEAPEAEGEAQPESEGVEAQDAEGEAQPESEGIEAQEAEEEAQP 2175
Query: 693 E------KKKNKDVYPSCSSTTA-----------STVGNSSSHNTASQSPDFVRTVNSGG 735
E + + P A V + A P+ V T + G
Sbjct: 2176 ELEGVEAPEAEGEAQPESEGIEAPEAEGEAQPELEGVEAPEAEEEAQPEPEGVETPEAEG 2235
Query: 736 SSEPSPTEVDVSRQCACSPGGSEDSEAMEEGDAESSVCPRCCCHRPQESQRRT--SRCSD 793
++P +E + + SP S EE SS P P T R
Sbjct: 2236 EAQPE-SEGETQGEKKGSPQVSLGDGQSEEASESSSPVPEDRPTPPPSPGGDTPHQRPGS 2294
Query: 794 EERPSTSRA-----CVVNGPDGTRSAFSFRTLPQGGSSGPAHDER--TNGSGSGATGEDR 846
+ PS+SRA C + R+ P S+G H ER T +T E
Sbjct: 2295 QTGPSSSRASSWGNCWQKDSENDHVLGDTRS-PDAKSTGTPHAERKATRMYPESSTSEQE 2353
Query: 847 R---GSSQPE 853
GS PE
Sbjct: 2354 EAPLGSRTPE 2363
>gi|239755326 PREDICTED: hypothetical protein [Homo sapiens]
Length = 375
Score = 42.7 bits (99), Expect = 0.002
Identities = 48/166 (28%), Positives = 65/166 (39%), Gaps = 19/166 (11%)
Query: 703 SC-SSTTASTVGNSSSHNTAS----QSPDFVRTVNSGGSSEPSPTEVDVSRQCACSPGGS 757
SC SS T+ST N S T+S QS T S SSE S T C+C G+
Sbjct: 41 SCQSSGTSSTSCNWQSSRTSSTCSCQSSGTSSTSCSCQSSETSST-------CSCQSSGT 93
Query: 758 EDSEAMEEGDAESSVCPRCCCHRPQESQRRTSRCSDEERPSTSRACVVNGPDGTRSAFSF 817
+ + SS CCC + S S C STS +C + T S +
Sbjct: 94 SSTSCSWQFSRTSST---CCCQSSRTSSTSCS-CQSSRTSSTSCSCQSSRTSSTCSCQTS 149
Query: 818 RTLPQGGSSGPAHDERT---NGSGSGATGEDRRGSSQPESCDVQSN 860
RT S + T SG+ +T + + S +C QS+
Sbjct: 150 RTSSTSCSYQSSRTSSTCSCQSSGTSSTSCNWQSSRTSSTCSCQSS 195
Score = 36.2 bits (82), Expect = 0.19
Identities = 40/163 (24%), Positives = 60/163 (36%), Gaps = 25/163 (15%)
Query: 703 SCSSTTASTVGNS--SSHNTASQSPDFVRTVNSGGSSEPSPTEVDVSRQCACSPGGSEDS 760
SC S+ S+ S SS +++ S RT ++ S + S T S C+C G+ +
Sbjct: 122 SCQSSRTSSTSCSCQSSRTSSTCSCQTSRTSSTSCSYQSSRT----SSTCSCQSSGTSST 177
Query: 761 EAMEEGDAESSVCPRCCCHRPQESQRRTSRCSDEERPSTSRACVVNGPDGTRSAFSFRTL 820
+ SS C C STS +C +G T S S T
Sbjct: 178 SCNWQSSRTSSTC----------------SCQSSGTSSTSYSCQSSGTSSTCSCQSSGTS 221
Query: 821 PQG---GSSGPAHDERTNGSGSGATGEDRRGSSQPESCDVQSN 860
SSG + SG+ +T + S +C QS+
Sbjct: 222 STSCSCQSSGTSSTCSCQSSGTSSTSCSWQSSRTSSTCSCQSS 264
Score = 34.7 bits (78), Expect = 0.56
Identities = 32/148 (21%), Positives = 58/148 (39%), Gaps = 20/148 (13%)
Query: 703 SCSSTTASTVGNSSSHNTASQSPDFVRTVNSGGSSEPSPTEVDVSRQCACSPGGSEDSEA 762
+CS ++ T S S ++ S + S+ S S C+C G+ +
Sbjct: 235 TCSCQSSGTSSTSCSWQSSRTSSTCSCQSSGTSSTSCSCQSSGTSSTCSCQSSGTSSTSC 294
Query: 763 MEEGDAESSVC---------PRCCCHRPQESQRRTSRCSDEERPSTSRACVV--NGPDGT 811
+ SS C C C +S R +S CS + ++S +C+ +G T
Sbjct: 295 SCQSSRTSSTCSCQFSRTSSTSCSC----QSSRTSSTCSCQSSGTSSTSCICWSSGTSST 350
Query: 812 RSAFSFRTLPQGGSSGPAHDERTNGSGS 839
+ F G+S + + R++G+ S
Sbjct: 351 SCSGRF-----SGTSSTSCNCRSSGTSS 373
>gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo
sapiens]
Length = 699
Score = 42.4 bits (98), Expect = 0.003
Identities = 91/437 (20%), Positives = 152/437 (34%), Gaps = 56/437 (12%)
Query: 506 ANIHDNNHHHPDDSDEENDFRQDLQPGEQQFAADALNEMEDIVQEDGEVVAESGNNTPAH 565
A+ ++ DD DEE+ +Q +Q G + A A + D + + S + P +
Sbjct: 123 ASESSSSEESSDDDDEEDQKKQPVQKGVKPQAKAAKAPPKKAKSSDSDSDSSSEDEPPKN 182
Query: 566 SQ-AIIPVDVDEEQAGPSGLQRVV------KPTSITVHDSESDDEEDSLELQEVWIPKNG 618
+ I PV V + P R K S + S S +DS E + PK
Sbjct: 183 QKPKITPVTVKAQTKAPPKPARAAPKIANGKAASSSSSSSSSSSSDDSEEEKAAATPK-- 240
Query: 619 TRRYSEREEKTGESVQSRELSVSGKGKTPLRKRYNSHQMGQSKQFPLEESSCEKG---CQ 675
KT Q + TP RK +S ++ ++ K
Sbjct: 241 ---------KTVPKKQVVAKAPVKAATTPTRKSSSSEDSSSDEEEEQKKPMKNKPGPYSS 291
Query: 676 VTSEQIKADMKAARDIPEKKKNKDVYPSCSSTTASTVGNSSSHNTASQSPDFVRTVNSGG 735
V K+ P KK + P SS +S +SSS + + V S
Sbjct: 292 VPPPSAPPPKKSLGTQPPKKAVEKQQPVESSEDSSDESDSSSE---EEKKPPTKAVVSKA 348
Query: 736 SSEPSPTEVDVSRQCACSPGGSEDSEAMEEGDAESSVCPRCCCHRPQESQRRTSR--CSD 793
+++P P +++ A S S DS++ E+ +A S +P + + +S
Sbjct: 349 TTKPPP-----AKKAAESSSDSSDSDSSEDDEAPS---------KPAGTTKNSSNKPAVT 394
Query: 794 EERPSTSRACVVNGPDG------TRSAFSFRTLPQGGSS---------GPAHDERTNGSG 838
+ P+ A P G TR A S + + SS + T +
Sbjct: 395 TKSPAVKPAAAPKQPVGGGQKLLTRKADSSSSEEESSSSEEEKTKKMVATTKPKATAKAA 454
Query: 839 SGATGEDRRGSSQPESCDVQSNEDYPRRPLTRARSRLSHVLLVSESEVAKTKPRHAMKRK 898
+ S+ S D S+ T ++S + A +KP A K K
Sbjct: 455 LSLPAKQAPQGSRDSSSDSDSSSSEEEEEKT-SKSAVKKKPQKVAGGAAPSKPASAKKGK 513
Query: 899 RTADKSTSTSDPVIEDD 915
+ S+S+ D E++
Sbjct: 514 AESSNSSSSDDSSEEEE 530
Score = 38.1 bits (87), Expect = 0.050
Identities = 50/228 (21%), Positives = 89/228 (39%), Gaps = 22/228 (9%)
Query: 598 SESDDEEDSLELQEVWIPKNGTRRYSEREEKTGESVQSRELS-----VSGKGKTPLRKRY 652
S+S D + S + + P T+ S + T +S + + V G K RK
Sbjct: 363 SDSSDSDSSEDDEAPSKPAGTTKNSSNKPAVTTKSPAVKPAAAPKQPVGGGQKLLTRKAD 422
Query: 653 NSHQMGQSKQFPLEESSCEKGCQVTSEQIKADMKAARDIPEKKK---NKDVYPSCSSTTA 709
+S +S EE +K V + + KA KAA +P K+ ++D S+++
Sbjct: 423 SSSSEEESSSS--EEEKTKK--MVATTKPKATAKAALSLPAKQAPQGSRDSSSDSDSSSS 478
Query: 710 STVGNSSSHNTASQSPDFVRTVNSGGSSEPSPTEVDVSRQCACSPGGSEDSEAMEEGDAE 769
+S + + P V +GG++ P + + + S+DS EE +
Sbjct: 479 EEEEEKTSKSAVKKKPQKV----AGGAAPSKPASAKKGKAESSNSSSSDDSSEEEEEKLK 534
Query: 770 SSVCPRCCCHRPQESQRRT------SRCSDEERPSTSRACVVNGPDGT 811
PR + + T ++ S+EE +A VV G+
Sbjct: 535 GKGSPRPQAPKANGTSALTAQNGKAAKNSEEEEEEKKKAAVVVSKSGS 582
Score = 37.0 bits (84), Expect = 0.11
Identities = 64/330 (19%), Positives = 115/330 (34%), Gaps = 50/330 (15%)
Query: 598 SESDDEEDSLELQEVWIPKNGTRRYSEREEKTGESVQSRELSVSGKGKTPLRKRYNSHQM 657
+ S D EDS E E EE G + + G P + + +
Sbjct: 82 ASSSDSEDSSE---------------EEEEVQGPPAKKAAVPAKRVGLPPGKAAAKASES 126
Query: 658 GQSKQFPLEESSCEKGCQVTSEQIKADMKAARDIPEKKKNKDVYPSCSSTTASTVGNSSS 717
S++ ++ ++ Q + +K KAA+ P+K K+ D + + +S
Sbjct: 127 SSSEESSDDDDEEDQKKQPVQKGVKPQAKAAKAPPKKAKSSD---------SDSDSSSED 177
Query: 718 HNTASQSPDFVR-TVNSGGSSEPSPT---------EVDVSRQCACSPGGSEDSEAMEEGD 767
+Q P TV + + P P + S + S S+DSE +
Sbjct: 178 EPPKNQKPKITPVTVKAQTKAPPKPARAAPKIANGKAASSSSSSSSSSSSDDSEEEKAAA 237
Query: 768 AESSVCPR--CCCHRPQESQRRTSRCSDEERPSTSRACVVNGPDGTRSAFSFRTLPQGGS 825
P+ P ++ +R S S+S + ++P +
Sbjct: 238 TPKKTVPKKQVVAKAPVKAATTPTRKSSSSEDSSSDEEEEQKKPMKNKPGPYSSVPPPSA 297
Query: 826 SGPAHDERTNGSGSGATGEDRRGSSQPESCDVQSNEDYPRRPLTRARSRLSHVLLVSESE 885
P T + SS+ S + S+ + ++P T+A +VS+
Sbjct: 298 PPPKKSLGTQPPKKAVEKQQPVESSEDSSDESDSSSEEEKKPPTKA--------VVSK-- 347
Query: 886 VAKTKPRHAMKRKRTADKSTSTSDPVIEDD 915
A TKP A K+ A+ S+ +SD +D
Sbjct: 348 -ATTKPPPA---KKAAESSSDSSDSDSSED 373
>gi|126362967 Nck-associated protein 5 isoform 1 [Homo sapiens]
Length = 1909
Score = 41.6 bits (96), Expect = 0.005
Identities = 46/181 (25%), Positives = 78/181 (43%), Gaps = 20/181 (11%)
Query: 667 ESSCEKGCQVTSE-------QIKADMKAARDIPEKKKNKDVYPSCSSTTASTVGNSSSHN 719
+ SC G ++++ +IKADM+ +D K+ N+++ A +V S
Sbjct: 1651 QGSCLIGSSISTQGNHKKNMKIKADMEVPKDSLVKEANENLQEDEDDAVADSVFQSHIIE 1710
Query: 720 TASQSPDFVRTVNSGGSSEPSPTEVDVSR-QCACSPGGSEDSEAMEEGDAESSVCPRCCC 778
+ Q +RT++SG + P P + S + C P ED+E + + S
Sbjct: 1711 SNCQ----MRTLDSGIGTFPLPDSGNRSTGRYLCQPDSPEDAEPLLPLQSALSAVSSM-- 1764
Query: 779 HRPQESQRRTSRCSDEERPSTSRACVVNGPDGTRSAFSFR----TLPQGGSSGPAHDERT 834
R Q +R +D +RP+ S A V + D +A R LP+ SSG ++
Sbjct: 1765 -RAQTLEREVPSSTDGQRPADS-AIVHSTSDPIMTARGMRPLQSRLPKPASSGKVSSQKQ 1822
Query: 835 N 835
N
Sbjct: 1823 N 1823
>gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens]
Length = 330
Score = 41.6 bits (96), Expect = 0.005
Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 11/145 (7%)
Query: 761 EAMEEGDAESSVCPRCCCHRPQESQRRTSRCSDEERPSTSRACVVNGPDGTRSAFSFRTL 820
+A EE D+ R + + S R+S S PS+SR+ +RS+ S ++
Sbjct: 186 DASEEEDSNKKKSNRRSRSKSRSSHSRSS--SRSSSPSSSRS---RSRSRSRSSSSSQSR 240
Query: 821 PQGGSSGPAHDERTNGSGSGATGEDRRGSSQPESCDVQSNEDYPRRPLTRARSRLSHVLL 880
+ S R+ GS S ++ RGSS P S+ P R R+RSR S
Sbjct: 241 SRSSSR---ERSRSRGSKSRSSSRSHRGSSSPRKRSYSSSSSSPERNRKRSRSRSSS--- 294
Query: 881 VSESEVAKTKPRHAMKRKRTADKST 905
+ + +T+ R +R R++ S+
Sbjct: 295 SGDRKKRRTRSRSPERRHRSSSGSS 319
Score = 34.3 bits (77), Expect = 0.73
Identities = 50/247 (20%), Positives = 91/247 (36%), Gaps = 39/247 (15%)
Query: 503 NNNANIHDNNHHHPDDSDEENDFRQDLQPGEQQFAADALNEMEDIVQEDGEVVAESGNNT 562
N N+ D +E ++ G+ A L E+ED E E +
Sbjct: 107 NERENVEYIEREESDGEYDEFGRKKKKYRGKAVGPASILKEVEDKESE-----GEEEDED 161
Query: 563 PAHSQAIIPVDVDEEQAGPSGLQRVVKPTSITVHDSESDDEEDSLELQEVWIPKNGTRRY 622
S+ + D DE+ A ++ ++ ++ +EEDS + K RR
Sbjct: 162 EDLSKYKLDEDEDEDDA------------DLSKYNLDASEEEDSNK-------KKSNRRS 202
Query: 623 SEREEKTGESVQSRELSVSG-KGKTPLRKRYNSHQMGQSKQFPLEES--------SCEKG 673
+ + SR S S + ++ R R +S +S+ E S S +
Sbjct: 203 RSKSRSSHSRSSSRSSSPSSSRSRSRSRSRSSSSSQSRSRSSSRERSRSRGSKSRSSSRS 262
Query: 674 CQVTSEQIKADMKAARDIPEKKKNKDVYPSCSSTTASTVGNSSSHNTASQSPDFVRTVNS 733
+ +S K ++ PE+ + + S + +S+ G+ T S+SP+ +S
Sbjct: 263 HRGSSSPRKRSYSSSSSSPERNRKR------SRSRSSSSGDRKKRRTRSRSPERRHRSSS 316
Query: 734 GGSSEPS 740
G S S
Sbjct: 317 GSSHSGS 323
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 41.6 bits (96), Expect = 0.005
Identities = 97/417 (23%), Positives = 146/417 (35%), Gaps = 70/417 (16%)
Query: 517 DDSDEENDFRQDLQPGEQQFAADALNEMEDIVQEDGEVVAESGNNTPAHSQAIIPVDVDE 576
D S E Q +P + ++ LN Q + SG+ + + + + +
Sbjct: 1481 DSSPEPKALPQTPRPRSRSPSSPELNNKCLTPQRE-----RSGSESSVDQKTVARTPLGQ 1535
Query: 577 EQAGPSGLQRVVKPTSITVHDSESDDEEDSLELQEVWIPKNGTRRYSEREEKTGESVQSR 636
S + VKP++ SESD DS K TR + ++G S +
Sbjct: 1536 RSRSGSSQELDVKPSASPQERSESDSSPDS---------KAKTRTPLRQRSRSGSSPE-- 1584
Query: 637 ELSVSGKGK-TPLRKRYNSHQMGQSKQFPLEESSCEKGCQVTSEQIKADMKAARDIPEKK 695
V K + +P R R S + K P + G +S + KA A R +P +
Sbjct: 1585 ---VDSKSRLSPRRSRSGSSP--EVKDKPRAAPRAQSGSD-SSPEPKA--PAPRALPRRS 1636
Query: 696 KNKDVYPSCSSTTASTVGNSSSHNTASQSPDFVRTVNSGGSSEPSP---TEVDVSRQCAC 752
++ S S + SSS ++ + P RT G S P P + R+ +
Sbjct: 1637 RS----GSSSKGRGPSPEGSSSTESSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSSR 1692
Query: 753 SPGGSEDSEAMEEGDAESSVCPRCCCHRPQESQRRTSRCSDE--ERPSTSRACVVNGPDG 810
S + +S P P +R S S E E+ +SR
Sbjct: 1693 SSPELTRKARLSRRSRSASSSPETRSRTPPRHRRSPSVSSPEPAEKSRSSRR-------- 1744
Query: 811 TRSAFSFR--TLPQGGSSGPAHDERTNGSGSGATGE--------DRRGSSQPESCDVQSN 860
RSA S R T + G S S S + E DR GSSQ S
Sbjct: 1745 RRSASSPRTKTTSRRGRSPSPKPRGLQRSRSRSRREKTRTTRRRDRSGSSQSTS------ 1798
Query: 861 EDYPRRPLTRARSRLS---------HVLLVSESEVAKTKPRHAMKRKRTADKSTSTS 908
RR +R+RSR++ H + E ++T R R RT S S
Sbjct: 1799 ---RRRQRSRSRSRVTRRRRGGSGYHSRSPARQESSRTSSRRRRGRSRTPPTSRKRS 1852
Score = 38.5 bits (88), Expect = 0.038
Identities = 42/176 (23%), Positives = 71/176 (40%), Gaps = 4/176 (2%)
Query: 698 KDVYPSCSSTTASTVGNSSSHNTASQSPDFVRTVNSGGSSEPSPTEVDVSRQCACSPGGS 757
K+ S SS+++S+ +SSS +++S S + +S GSS P EV + R + +P
Sbjct: 2528 KERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALKRVPSPTPA-- 2585
Query: 758 EDSEAMEEG-DAESSVCPRCCCHRPQESQRRTSRCSDEERPSTSRACVVNGPDGTRSAFS 816
EA+ EG E + R S +S S S+S + + + S+ S
Sbjct: 2586 -PKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2644
Query: 817 FRTLPQGGSSGPAHDERTNGSGSGATGEDRRGSSQPESCDVQSNEDYPRRPLTRAR 872
+ P GP + GE R S + ++ + P+ R R
Sbjct: 2645 SSSSPSPAKPGPQALPKPASPKKPPPGERRSRSPRKPIDSLRDSRSLSYSPVERRR 2700
Score = 38.5 bits (88), Expect = 0.038
Identities = 49/215 (22%), Positives = 78/215 (36%), Gaps = 13/215 (6%)
Query: 624 EREEKTGESVQSRELSVSGKGKTPLRKRYNSHQMGQSKQFPLEESSCEKGCQVTSEQIKA 683
ER + S S S S + +S + P++ K + K
Sbjct: 2529 ERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALKRVPSPTPAPKE 2588
Query: 684 DMKAARD---IPEKKKNKDVYPSCSSTTASTVGNSSSHNTASQSPDFVRTVNSGGSSEPS 740
++ R P K+K + S SS+++S+ +SSS +++S S + +S SS S
Sbjct: 2589 AVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2648
Query: 741 PTEVDVSRQCACSPGGSEDSEAMEEGDAESSVCPRCCCHRPQESQR--RTSRCSDEERPS 798
P+ Q P + E S PR +P +S R R+ S ER
Sbjct: 2649 PSPAKPGPQALPKPASPKKPPPGE----RRSRSPR----KPIDSLRDSRSLSYSPVERRR 2700
Query: 799 TSRACVVNGPDGTRSAFSFRTLPQGGSSGPAHDER 833
S + S R +G S P+H R
Sbjct: 2701 PSPQPSPRDQQSSSSERGSRRGQRGDSRSPSHKRR 2735
Score = 34.7 bits (78), Expect = 0.56
Identities = 47/202 (23%), Positives = 68/202 (33%), Gaps = 28/202 (13%)
Query: 723 QSPDFVRTVNSGGSSEPSPTEVDVSRQCACSPGGSEDSEAM-EEGDAESSVCPRCCCH-- 779
+SP+ + +S SS PSP VSR + SP + + A + SS + H
Sbjct: 407 KSPEKLPQSSSSESSPPSPQPTKVSRHASSSPESPKPAPAPGSHREISSSPTSKNRSHGR 466
Query: 780 --RPQESQRRTSRCSDEER-PSTSRACVVNGPDGTRSAFSFRTLPQ----------GGSS 826
R + SR R P+T++ T+ S PQ G S
Sbjct: 467 AKRDKSHSHTPSRRMGRSRSPATAKRGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWGRSR 526
Query: 827 GPAHDERTNGSGSGATGEDRRGSSQPESCDVQSNEDYPRRPLTRARSRLSHVLLVSESEV 886
P R+ R + S + + R P TR RSR
Sbjct: 527 SPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSR------------ 574
Query: 887 AKTKPRHAMKRKRTADKSTSTS 908
++T R R RT + S S
Sbjct: 575 SRTPARRGRSRSRTPARRRSRS 596
Score = 33.9 bits (76), Expect = 0.95
Identities = 76/343 (22%), Positives = 111/343 (32%), Gaps = 59/343 (17%)
Query: 615 PKNGTRRYSEREEKTGESVQSRELSVSG------------KGKTPLRKRYNSHQMGQSKQ 662
PK R R ++G S + R S G K +T R +S + +
Sbjct: 1624 PKAPAPRALPRRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRGSRSSPEPKTKSR 1683
Query: 663 FPLEESSCEKGCQVTSE-QIKADMKAARDIPEKKKNKDVY----PSCSSTTASTVGNSSS 717
P S ++T + ++ ++A PE + PS SS + SS
Sbjct: 1684 TPPRRRSSRSSPELTRKARLSRRSRSASSSPETRSRTPPRHRRSPSVSSPEPAEKSRSSR 1743
Query: 718 HNTASQSPDFVRTVNSGGSSEPSPTEVDVSRQCA------------CSPGGSEDSEAMEE 765
++ SP T G S P P + SR + S S +
Sbjct: 1744 RRRSASSPRTKTTSRRGRSPSPKPRGLQRSRSRSRREKTRTTRRRDRSGSSQSTSRRRQR 1803
Query: 766 GDAESSVCPR----CCCHRPQESQRRTSRCSDEERPSTSRACVVNGPDGTRSAFSFRTLP 821
+ S V R H +++ +SR S R SR P +R RT
Sbjct: 1804 SRSRSRVTRRRRGGSGYHSRSPARQESSRTSSRRRRGRSRT-----PPTSRKRSRSRT-- 1856
Query: 822 QGGSSGPAHDERTNGSGSGATGEDRRG--------SSQPESCDVQSNEDYPRRPLTRARS 873
PA +R+ S AT R S+ + V R +TR RS
Sbjct: 1857 -----SPAPWKRSRSRASPATHRRSRSRTPLISRRRSRSRTSPVSRRRSRSRTSVTRRRS 1911
Query: 874 RLSHVLLVSESEVAKTKPRHAMKRKR-----TADKSTSTSDPV 911
R S VS P +R R T +S S + PV
Sbjct: 1912 R-SRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPPV 1953
>gi|4504487 histidine rich calcium binding protein precursor [Homo
sapiens]
Length = 699
Score = 41.2 bits (95), Expect = 0.006
Identities = 37/154 (24%), Positives = 58/154 (37%), Gaps = 30/154 (19%)
Query: 490 SNQNSNNDDNNAQNNNANIHDNNHHHP-------------DDSDEENDFRQDLQPGEQQF 536
S++ S+ D+ +I + +HH P DDS+EE + +D PG
Sbjct: 440 SHRQSHQDEETGHGQRGSIKEMSHHPPGHTVVKDRSHLRKDDSEEEKEKEED--PGS--- 494
Query: 537 AADALNEMEDIVQEDGEVVAESGNNTPAHSQAIIPVDVDEEQAGPSGLQRVVKPTSITVH 596
+E +D E GE G+ + DEE+ L + +
Sbjct: 495 -----HEEDDESSEQGEKGTHHGSRDQEDEE-------DEEEGHGLSLNQEEEEEEDKEE 542
Query: 597 DSESDDEEDSLELQEVWIPKNGTRRYSEREEKTG 630
+ E +DEE E EV P + E EE+ G
Sbjct: 543 EEEEEDEERREERAEVGAPLSPDHSEEEEEEEEG 576
Score = 31.6 bits (70), Expect = 4.7
Identities = 62/311 (19%), Positives = 114/311 (36%), Gaps = 33/311 (10%)
Query: 491 NQNSNNDDNNAQNNNANIHDNNHHHPDDSDEENDFRQDLQPGE-QQFAADALNEMEDIVQ 549
+Q+ ++ A + + H +H H DEE D +D+ Q + + D +
Sbjct: 321 HQDHRKEEVEAVSGEHHHHVPDHRHQGHRDEEED--EDVSTERWHQGPQHVHHGLVDEEE 378
Query: 550 EDGEVVAESGNNTPAHSQAIIPVDVDEEQAGPSGLQRVVKPTSITVHDSESDDEEDSLEL 609
E+ E+ + G+ +H D ++ Q + P +DEE S EL
Sbjct: 379 EEEEITVQFGHYVASHQPRGHKSDEEDFQ----DEYKTEVPHHHHHRVPREEDEEVSAEL 434
Query: 610 QEVWIPKNGTRRYSEREEKTGESVQS--RELSVSGKGKTPLRKRYNSHQMGQSKQFPLEE 667
+ + R S ++E+TG + +E+S G T ++ R + + ++ EE
Sbjct: 435 GH----QAPSHRQSHQDEETGHGQRGSIKEMSHHPPGHTVVKDRSHLRKDDSEEEKEKEE 490
Query: 668 --SSCEKGCQVTSEQIKADMKAARDIPEKKKNKDVYPSCSSTTASTVGNSSSHNTASQSP 725
S E+ + + + K +RD +++ ++ G+ S N +
Sbjct: 491 DPGSHEEDDESSEQGEKGTHHGSRDQEDEEDEEE-------------GHGLSLNQEEEEE 537
Query: 726 DFVRTVNSGGSSEPSPTEVDVSRQCACSPGGSEDSEAMEEGDAESSVCPR-CCCHRPQES 784
+ E +V SP SE+ E EEG E PR P +
Sbjct: 538 EDKEEEEEEEDEERREERAEVG--APLSPDHSEEEEEEEEGLEEDE--PRFTIIPNPLDR 593
Query: 785 QRRTSRCSDEE 795
+ S EE
Sbjct: 594 REEAGGASSEE 604
>gi|28372531 protein phosphatase 4, regulatory subunit 2 [Homo
sapiens]
Length = 417
Score = 40.4 bits (93), Expect = 0.010
Identities = 50/223 (22%), Positives = 83/223 (37%), Gaps = 29/223 (13%)
Query: 487 ALVSNQNSNNDDNNAQNNNANIHDNNH-HHPDDSDEENDFR-----QDLQPGEQQFAADA 540
+L + +N + + AN+ N +H D S E++ ++ P E A+
Sbjct: 183 SLSAPMTTNGLPESTDSKEANLQQNEEKNHSDSSTSESEVSSVSPLKNKHPDEDAVEAEG 242
Query: 541 LNEMEDIVQEDGEVVAESGNNTPAHSQAIIPVDVDEEQAGPSGLQRVVKPTSITVHDSES 600
++GEV + T S I V V E +A S + H +E
Sbjct: 243 HEVKRLRFDKEGEVRETASQTT---SSEISSVMVGETEASSSSQDKDKDSRCTRQHCTEE 299
Query: 601 DDEEDSLELQEVWI------------PKNGTRRYSEREEKTGESVQSRELSVSGKGKTPL 648
D+EED E +E ++ K + EE + E+ Q E VS K L
Sbjct: 300 DEEEDEEEEEESFMTSREMIPERKNQEKESDDALTVNEETSEENNQMEESDVSQAEKDLL 359
Query: 649 RKRYNSHQMGQSKQFPLEESSCEKGCQVTSEQIKADMKAARDI 691
H G + P+ SS + C+ T E + ++ +I
Sbjct: 360 ------HSEGSENEGPVSSSSSD--CRETEELVGSNSSKTGEI 394
>gi|60097902 filaggrin [Homo sapiens]
Length = 4061
Score = 40.0 bits (92), Expect = 0.013
Identities = 64/279 (22%), Positives = 100/279 (35%), Gaps = 46/279 (16%)
Query: 623 SEREEKTGESVQSRELSVSGKGKTPLRKRYNSHQMGQSKQFPLEESSCEKGCQVTSEQIK 682
S+ + G S S SVSG GK LR++ SHQ +S + E S G +
Sbjct: 420 SQASDSEGHSENSDTQSVSGHGKAGLRQQ--SHQ--ESTRGRSGERSGRSGSSLYQ---- 471
Query: 683 ADMKAARDIPEKKKNKDVYPSCSSTTASTVGN-------SSSHNTASQSPDFVR--TVNS 733
+ ++ + ++T G+ SS H+ + + D +R +S
Sbjct: 472 --------VSTHEQPDSAHGRTGTSTGGRQGSHHEQARDSSRHSASQEGQDTIRGHPGSS 523
Query: 734 GGSSEPSPTEVDVSRQCACSPGGSEDSEAMEEGDAESSVCPRCCCHRPQESQRRTSRCSD 793
G + S E V+R GS S +G +++S Q R SR +
Sbjct: 524 RGGRQGSHHEQSVNRS---GHSGSHHSHTTSQGRSDAS--------HGQSGSRSASRQTR 572
Query: 794 EERPSTSRACVVNGPDGTRSAFSFRTLPQGGSSGPAHDERTNGSGSGATGEDRRGSSQPE 853
E S DGTR + S + H + G SG +GSS +
Sbjct: 573 NEEQSG---------DGTRHSGSRHHEASSQADSSRHSQVGQGQSSGPRTSRNQGSSVSQ 623
Query: 854 SCDVQSNEDYPRRPLTRARSRLSHVLLVSESEVAKTKPR 892
D Q + + R + + SR H +S PR
Sbjct: 624 DSDSQGHSEDSER-WSGSASRNHHGSAQEQSRDGSRHPR 661
Score = 40.0 bits (92), Expect = 0.013
Identities = 86/428 (20%), Positives = 150/428 (35%), Gaps = 69/428 (16%)
Query: 483 GVSSALVSNQNSNNDDNNAQNNNANIHDNNHHHPDDSDEENDFRQDLQPGEQQFAADALN 542
G S + S+ ++DD+ + +A+ +HH ++ D + PG Q +
Sbjct: 1267 GSSVSQDSDSERHSDDSERLSGSAS----RNHHGSSREQSRDGSR--HPGFHQEDRASHG 1320
Query: 543 EMEDIVQEDGEVVAESGNNTPAHSQAIIPVDVDEEQAGPSGLQRVVKPTSITVHDSESDD 602
D ++ G ES + H QA+ EQA S +R H S
Sbjct: 1321 HSADSSRQSGTHHTESSS----HGQAVS----SHEQARSSPGER---------HGSRHQQ 1363
Query: 603 EEDSLELQEVWIPKNGTRRYSEREEKTGESVQSRELSVSGKGKTPLRKRYNSHQMGQSKQ 662
DS + G R+ S +G S + +G + + GQ+
Sbjct: 1364 SADSSRHSGI-----GHRQASSAVRDSGHRGSSGSQVTNSEGHSEDSDTQSVSAHGQAG- 1417
Query: 663 FPLEESSCEKGCQVTSEQIKADMKAARDIPEKKKNKDVYPSCSSTTASTVG-------NS 715
P ++S E + E + ++++ + + +T G NS
Sbjct: 1418 -PHQQSHKESARGQSGESSGRSRSFLYQVSSHEQSESTHGQTAPSTGGRQGSRHEQARNS 1476
Query: 716 SSHNTASQSPDFVR--TVNSGGSSEPSPTEVDVSRQCACSPGGSEDSEAMEEGDAESSVC 773
S H+ + D +R +S G + S E V R G S +G +++S
Sbjct: 1477 SRHSASQDGQDTIRGHPGSSRGGRQGSYHEQSVDRS---GHSGYHHSHTTPQGRSDAS-- 1531
Query: 774 PRCCCHRPQESQRRTSRCSDEERPSTSRACVVNGPDGTRSAFSFRTLPQGGSSGPAHDER 833
Q R SR + E S DG+R + S P + H +
Sbjct: 1532 ------HGQSGPRSASRQTRNEEQSG---------DGSRHSGSRHHEPSTRAGSSRHSQV 1576
Query: 834 TNGSGSGATGEDRRGSSQPESCDVQS-NEDYPRRPLTRARSRLSHVLLVSESEVAKTKPR 892
G +G+ R+GSS + D + +ED RR + +R+ A+ + R
Sbjct: 1577 GQGESAGSKTSRRQGSSVSQDRDSEGHSEDSERRSESASRNHYGS---------AREQSR 1627
Query: 893 HAMKRKRT 900
H + R+
Sbjct: 1628 HGSRNPRS 1635
Score = 37.0 bits (84), Expect = 0.11
Identities = 67/289 (23%), Positives = 105/289 (36%), Gaps = 52/289 (17%)
Query: 617 NGTRRYS--EREEKTGESVQSRELSVSGKGKT-PLRKRYNSHQMGQSKQFPLEESSCEKG 673
+G R YS + + G S S SVS +GK P ++ + GQS ESS G
Sbjct: 2034 SGHRGYSGSQASDSEGHSEDSDTQSVSAQGKAGPHQQSHKESARGQSG-----ESSGRSG 2088
Query: 674 CQVTSEQIKADMKAARDIPEKKKNKDVYPSCSSTTASTVGN-------SSSHNTASQSPD 726
+ + ++++ + + +T G+ SS H+ + + D
Sbjct: 2089 SFLYQ------------VSTHEQSESTHGQSAPSTGGRQGSHYDQAQDSSRHSASQEGQD 2136
Query: 727 FVR--TVNSGGSSEPSPTEVDVSRQCACSPGGSEDSEAMEEGDAESSVCPRCCCHRPQES 784
+R S G + S E V R GS S +G +++S R Q
Sbjct: 2137 TIRGHPGPSRGGRQGSHQEQSVDRS---GHSGSHHSHTTSQGRSDAS--------RGQSG 2185
Query: 785 QRRTSRCSDEERPSTSRACVVNGPDGTRSAFSFRTLPQGGSSGPAHDERTNGSGSGATGE 844
R SR + ++ S DG+R + S + H G SG
Sbjct: 2186 SRSASRKTYDKEQSG---------DGSRHSGSHHHEASSWADSSRHSLVGQGQSSGPRTS 2236
Query: 845 DRRGSSQPESCDVQS-NEDYPRRPLTRARSRLSHVLLVSESEVAKTKPR 892
RGSS + D + +ED RR + + SR H +S PR
Sbjct: 2237 RPRGSSVSQDSDSEGHSEDSERR--SGSASRNHHGSAQEQSRDGSRHPR 2283
Score = 34.7 bits (78), Expect = 0.56
Identities = 68/335 (20%), Positives = 109/335 (32%), Gaps = 45/335 (13%)
Query: 550 EDGEVVAESGNNTPAHSQAIIPVDVDEEQAGPSGLQRVVKPTSITVHDSESDDEEDSLEL 609
ED + + SG+ H Q +E A +R + S S E S
Sbjct: 755 EDSDTQSVSGHGQAGHHQ-----QSHQESARDRSGERSRRSGSFLYQVSTHKQSESS--- 806
Query: 610 QEVWI-PKNGTRRYSEREEKTGESVQSRELSVSGKGKTPLRKRYNSHQMGQSKQFPLEES 668
W P G R+ S E+ S S S G+ +R S + G +Q E
Sbjct: 807 -HGWTGPSTGVRQGSHHEQARDNSRHS----ASQDGQDTIRGHPGSSRRG--RQGSHHEQ 859
Query: 669 SCEKGCQVTSEQIKADMKAARDIPEKKKNKDVYPSCSSTTASTVGNSSSHNTASQSPDFV 728
S ++ S + D ++ + S+S T ++
Sbjct: 860 SVDRSGHSGSHHSHTTSQGRSD---------------ASRGQSGSRSASRTTRNEEQSRD 904
Query: 729 RTVNSGGSSEPSPTEVDVSRQCACSPGGSEDSEAMEEGDAESSVCPRCCCHRPQESQRRT 788
+ +SG + + D+SR G SE S SSV E R
Sbjct: 905 GSRHSGSRHHEASSHADISRHSQAGQGQSEGSRTSRR--QGSSVSQDSDSEGHSEDSERW 962
Query: 789 SRCSDEERPSTSRACVVNGPDGTRSAFSFR-----TLPQGGSSGPAHDERTNGSGSGATG 843
S + +++ +G RS R + SG H E ++G + ++
Sbjct: 963 SGSASRNHRGSAQEQSRHGSRHPRSHHEDRAGHGHSADSSRQSGTPHAETSSGGQAASSH 1022
Query: 844 E-------DRRGSSQPESCDVQSNEDYPRRPLTRA 871
E +R GS +S D + PRR + A
Sbjct: 1023 EQARSSPGERHGSRHQQSADSSRHSGIPRRQASSA 1057
Score = 32.7 bits (73), Expect = 2.1
Identities = 55/267 (20%), Positives = 93/267 (34%), Gaps = 28/267 (10%)
Query: 623 SEREEKTGESVQSRELSVSGKGKTPLRKRYNSHQ----------MGQSKQFPLEESSCEK 672
S+ + G S +S SVSG G+ ++ SHQ G+S F + S+ E+
Sbjct: 3338 SQASDSEGHSEESDTQSVSGHGQAGPHQQ--SHQESARDRSGGRSGRSGSFLYQVSTHEQ 3395
Query: 673 GCQVTSEQIKADMKAARDIPEKKKNKDVYPSCSSTTASTVGNSSSHNTASQSPDFVRTVN 732
+ + E+ ++ + + + G+ S Q + ++V+
Sbjct: 3396 SESAHGRTRTSTGRRQGSHHEQARDSSRHSASQEGQDTIRGHPGSSRRGRQGSHYEQSVD 3455
Query: 733 SGGSSEPSPTEVDVSRQCACSPG--GSEDSEAMEEGDAESSVCPRCCCHRPQESQRRTSR 790
G S + + S G GS + D +S R E+ +
Sbjct: 3456 RSGHSGSHHSHTTSQGRSDASRGQSGSRSASRQTRNDEQSGDGSRHSWSHHHEASTQ--- 3512
Query: 791 CSDEERPSTSRACVVNGPDGTRSAFSFRTLPQGGSSGPAHDERTNGSGSGATGEDRRGSS 850
+D R S S GP +R+ S + ER +GS S + RGS+
Sbjct: 3513 -ADSSRHSQSGQGQSAGPRTSRNQGSSVSQDSDSQGHSEDSERWSGSAS----RNHRGSA 3567
Query: 851 QPESCDVQSNEDYPRRPLTRARSRLSH 877
Q +S D R P + R H
Sbjct: 3568 QEQS------RDGSRHPTSHHEDRAGH 3588
Score = 31.6 bits (70), Expect = 4.7
Identities = 50/204 (24%), Positives = 76/204 (37%), Gaps = 29/204 (14%)
Query: 714 NSSSHNTASQSPDFVR--TVNSGGSSEPSPTEVDVSRQCACSPGGSEDSEAMEEGDAESS 771
+SS H+ + + D +R + G + S E V R GS S +G +++S
Sbjct: 3744 DSSRHSASQEGQDTIRGHPGSRRGGRQGSYHEQSVDRS---GHSGSHHSHTTSQGRSDAS 3800
Query: 772 VCPRCCCHRPQESQRRTSRCSDEERPSTSRACVVNGPDGTRSAFSFRTLPQGGSSGPAHD 831
Q R SR + E S DG+R + S + H
Sbjct: 3801 --------HGQSGSRSASRETRNEEQSG---------DGSRHSGSRHHEASTQADSSRHS 3843
Query: 832 ERTNGSGSGATGEDRRGSSQPESCDVQS-NEDYPRRPLTRARSRLSHVLLVSESEVAKTK 890
+ G +G+ R+GSS + D ++ ED RR + + SR H S E ++
Sbjct: 3844 QSGQGESAGSRRSRRQGSSVSQDSDSEAYPEDSERR--SESASRNHH---GSSREQSRDG 3898
Query: 891 PRHAMKRKRTADKSTSTSDPVIED 914
RH R S S PV D
Sbjct: 3899 SRHPGSSHRDT-ASHVQSSPVQSD 3921
>gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens]
Length = 727
Score = 39.3 bits (90), Expect = 0.023
Identities = 81/372 (21%), Positives = 120/372 (32%), Gaps = 64/372 (17%)
Query: 599 ESDDEEDSLELQEVWIPKNGTRRYSEREEKTG-----ESVQSREL--------------S 639
E DDE + E ++ K G++R S+R E T SV SR+L
Sbjct: 25 EQDDELYNPESEQDKNEKKGSKRKSDRMESTDTKRQKPSVHSRQLVSKPLSSSVSNNKRI 84
Query: 640 VSGKGKTPLRKRYNSHQMGQSKQFPLEESSCEKGCQVTSEQIK--ADMKAARDIPEKKKN 697
VS KGK+ + +Q + + + + E K + R +++
Sbjct: 85 VSTKGKSATEYKNEEYQRSERNKRLDADRKIRLSSSASREPYKNQPEKTCVRKRDPERRA 144
Query: 698 KDVYPSCS-------STTASTVGNSSSHNTASQSPDFVRTVNSGGSS---------EPSP 741
K P S AS SS S+ S GSS E
Sbjct: 145 KSPTPDGSERIGLEVDRRASRSSQSSKEEVNSEEYGSDHETGSSGSSDEQGNNTENEEEG 204
Query: 742 TEVDVSRQCACSPGGSEDSEAMEEGDAESSVCPRCCCHRPQESQRRTSRCSDEERPSTSR 801
E DV ED E E+G+ E +E + +EE R
Sbjct: 205 VEEDVEEDEEVEEDAEEDEEVDEDGEEE---------EEEEEEEEEEEEEEEEEYEQDER 255
Query: 802 ACVVNGPD-GTRSAFSFRTLPQGGSSGPAHDERTNGSGSGATGEDRRGSSQPESCDVQSN 860
G D TRS S GS + + + SGSG G D + + + +
Sbjct: 256 DQKEEGNDYDTRSEAS-----DSGSESVSFTDGSVRSGSGTDGSDEKKKERKRARGIS-- 308
Query: 861 EDYPRRPLTRARSRLSHVLLVSESEVAKTKPRHAMKRKRTADKSTSTSDPVIEDDHVQVL 920
P+ RS S SES K + A + TS +
Sbjct: 309 ------PIVFDRSGSS----ASESYAGSEKKHEKLSSSVRAVRKDQTSKLKYVLQDARFF 358
Query: 921 VLKSKNLVGVTM 932
++KS N V++
Sbjct: 359 LIKSNNHENVSL 370
>gi|169173184 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1230
Score = 38.9 bits (89), Expect = 0.029
Identities = 39/162 (24%), Positives = 61/162 (37%), Gaps = 11/162 (6%)
Query: 705 SSTTASTVGNSSSHNTASQSPDFVRTVNSGGSSEPSPTEVDVSRQCACSPGGSEDSEAME 764
+ST + + SSS + S S T + G + PS + V S A + S + +
Sbjct: 217 ASTPSDSGWASSSASCISPSASGASTSSDSGWASPSASWVSTSTSRASTSSDSGWASSSA 276
Query: 765 EGDAESS----VCPRCCCHRPQESQRRTSRCSDEERPSTSRACVVNGPDGTRSAFSFRTL 820
D+ +S VCP S S PS SRA T S + +
Sbjct: 277 SWDSITSDSGWVCPSASWASSSASWASAPSDSGSSSPSVSRA-------STLSVSGWASF 329
Query: 821 PQGGSSGPAHDERTNGSGSGATGEDRRGSSQPESCDVQSNED 862
G+S P+ T+ S SG + G + P + ++ D
Sbjct: 330 SASGASAPSDSGWTSHSASGVSTTSDSGWASPSASGASTSSD 371
Score = 30.8 bits (68), Expect = 8.0
Identities = 36/154 (23%), Positives = 55/154 (35%), Gaps = 8/154 (5%)
Query: 705 SSTTASTVGNSSSHNTASQSPDFVRTVNSGGSSEPSPTEVDVSRQCACS--PGGSEDSEA 762
+S +AS S AS S + T + G + PS + S CA S G S S++
Sbjct: 132 ASPSASGASTPSDSGWASPSASWASTSSDSGWASPSASWTSPSASCASSSASGASTPSDS 191
Query: 763 MEEGDAESSVCPRCCCHRPQESQRRTSRCSDEERPSTSRACVVNGPDGTRSAFSFRTLPQ 822
+ V P S SD S+S +C+ + SA T
Sbjct: 192 GWASPSVFWVSPSTSWASSPSDFGWASTPSDSGWASSSASCI------SPSASGASTSSD 245
Query: 823 GGSSGPAHDERTNGSGSGATGEDRRGSSQPESCD 856
G + P+ + + +T D +S S D
Sbjct: 246 SGWASPSASWVSTSTSRASTSSDSGWASSSASWD 279
>gi|42741682 zinc finger protein 265 isoform 2 [Homo sapiens]
Length = 320
Score = 38.9 bits (89), Expect = 0.029
Identities = 34/116 (29%), Positives = 51/116 (43%), Gaps = 8/116 (6%)
Query: 761 EAMEEGDAESSVCPRCCCHRPQESQRRTSRCSDEERPSTSRACVVNGPDGTRSAFSFRTL 820
+A EE D+ R + + S R+S S PS+SR+ +RS+ S ++
Sbjct: 186 DASEEEDSNKKKSNRRSRSKSRSSHSRSS--SRSSSPSSSRS---RSRSRSRSSSSSQSR 240
Query: 821 PQGGSSGPAHDERTNGSGSGATGEDRRGSSQPESCDVQSNEDYPRRPLTRARSRLS 876
+ S R+ GS S ++ RGSS P S+ P R R+RSR S
Sbjct: 241 SRSSSR---ERSRSRGSKSRSSSRSHRGSSSPRKRSYSSSSSSPERNRKRSRSRSS 293
>gi|4758172 dentin matrix acidic phosphoprotein 1 isoform 1
precursor [Homo sapiens]
Length = 513
Score = 38.5 bits (88), Expect = 0.038
Identities = 87/430 (20%), Positives = 153/430 (35%), Gaps = 59/430 (13%)
Query: 517 DDSDEENDFRQDLQPGEQQFAADALNEMEDIVQEDGEVVAESGNNTPAHSQAIIPVDVDE 576
+DSD+ ++ P Q A D +E ++ ED G ++ S++ +E
Sbjct: 138 EDSDDTIQASEESAPQGQDSAQDTTSESRELDNEDRVDSKPEGGDSTQESES------EE 191
Query: 577 EQAGPSGLQRVVKPTSITVHDSESDDEEDSLELQEVWIPKNGTRRYSEREEKTGESVQSR 636
G S SE DDE + E + G R + K+ ES ++
Sbjct: 192 HWVGGGS-----DGESSHGDGSELDDEGMQSDDPESIRSERGNSRMNSAGMKSKESGENS 246
Query: 637 ELSVSGKGKTPLRKRYNSHQMGQSKQFPLEESSCEKGCQVTSEQIKADMKAARDIPEKKK 696
E + + + S ++ + + E+ E T E++K+D E
Sbjct: 247 EQANTQDSGGSQLLEHPSRKIFRKSRISEEDDRSELDDNNTMEEVKSDS------TENSN 300
Query: 697 NKDVYPSCSSTTASTVGNSSSHNTASQSPDFVRTVNSGGSSEPSPTEVDVSRQCACSPGG 756
++D S + G+S + + S + + N G S S E ++S Q
Sbjct: 301 SRDT--GLSQPRRDSKGDSQEDSKENLSQE--ESQNVDGPSSESSQEANLSSQ------- 349
Query: 757 SEDSEAMEEGDAESSVCPRCCCHRPQESQRRTSRCSDEERPSTSRACVVNGPDGTRSAFS 816
SE+ EE +ES R TS D+E +S S
Sbjct: 350 ENSSESQEEVVSES---------RGDNPDPTTSYVEDQEDSDSS------------EEDS 388
Query: 817 FRTLPQGGSSGPAHDERTNGSGSGATGEDRRGSSQPESCDVQSNEDYPRRPLT-RARSRL 875
TL S + +E+ + S + PE + S E + ++S
Sbjct: 389 SHTLSH--SKSESREEQADSESSESLNFSEESPESPEDENSSSQEGLQSHSSSAESQSEE 446
Query: 876 SHVLLVSESEVAKTKPRHAMKRKRTADKSTSTSDPVIEDDHVQVLVLKSKNLVGVTMTNC 935
SH SE + + ++ K + +S S+S+ ED ++ + ++S+ L N
Sbjct: 447 SH----SEEDDSDSQDSSRSKEDSNSTESKSSSE---EDGQLKNIEIESRKLTVDAYHNK 499
Query: 936 GITDLVLKDC 945
I D DC
Sbjct: 500 PIGDQDDNDC 509
Score = 35.0 bits (79), Expect = 0.43
Identities = 54/252 (21%), Positives = 89/252 (35%), Gaps = 54/252 (21%)
Query: 657 MGQSKQFPLEESSCEKGCQVTSEQIKADMKAARDIPEKKKNKDVYPSCSSTTASTVGNSS 716
+ Q+ PLE S +G +V+SE+ + N+D PS S+ + +G+
Sbjct: 37 LAQAPTPPLESSESSEGSKVSSEE--------------QANED--PSDSTQSEEGLGSDD 80
Query: 717 SHNTASQSPDFVRTVNSGGSSEPSPTEVDVSRQCACSPGGSEDSEAMEEGDAESSVCPRC 776
+ F R+ GG + +DS GD +S P+
Sbjct: 81 HQYIYRLAGGFSRSTGKGGDDKDDD---------------EDDSGDDTFGDDDSGPGPK- 124
Query: 777 CCHRPQESQRRTSRCSDEERPSTSRACVVNGPDGTRSAFSFRT-------------LPQG 823
R + R SDE+ T +A + P G SA + P+G
Sbjct: 125 --DRQEGGNSRLG--SDEDSDDTIQASEESAPQGQDSAQDTTSESRELDNEDRVDSKPEG 180
Query: 824 GSSGPAHDERTNGSGSGATGEDRRGSSQPESCDVQSNEDYPRRPLTRARSRLSHVLLVSE 883
G S + + G G+ GE G + ++D R SR++ + S+
Sbjct: 181 GDSTQESESEEHWVGGGSDGESSHGDGSELDDEGMQSDDPESIRSERGNSRMNSAGMKSK 240
Query: 884 -----SEVAKTK 890
SE A T+
Sbjct: 241 ESGENSEQANTQ 252
>gi|121256621 dentin matrix acidic phosphoprotein 1 isoform 2
precursor [Homo sapiens]
Length = 497
Score = 38.5 bits (88), Expect = 0.038
Identities = 87/430 (20%), Positives = 153/430 (35%), Gaps = 59/430 (13%)
Query: 517 DDSDEENDFRQDLQPGEQQFAADALNEMEDIVQEDGEVVAESGNNTPAHSQAIIPVDVDE 576
+DSD+ ++ P Q A D +E ++ ED G ++ S++ +E
Sbjct: 122 EDSDDTIQASEESAPQGQDSAQDTTSESRELDNEDRVDSKPEGGDSTQESES------EE 175
Query: 577 EQAGPSGLQRVVKPTSITVHDSESDDEEDSLELQEVWIPKNGTRRYSEREEKTGESVQSR 636
G S SE DDE + E + G R + K+ ES ++
Sbjct: 176 HWVGGGS-----DGESSHGDGSELDDEGMQSDDPESIRSERGNSRMNSAGMKSKESGENS 230
Query: 637 ELSVSGKGKTPLRKRYNSHQMGQSKQFPLEESSCEKGCQVTSEQIKADMKAARDIPEKKK 696
E + + + S ++ + + E+ E T E++K+D E
Sbjct: 231 EQANTQDSGGSQLLEHPSRKIFRKSRISEEDDRSELDDNNTMEEVKSDS------TENSN 284
Query: 697 NKDVYPSCSSTTASTVGNSSSHNTASQSPDFVRTVNSGGSSEPSPTEVDVSRQCACSPGG 756
++D S + G+S + + S + + N G S S E ++S Q
Sbjct: 285 SRDT--GLSQPRRDSKGDSQEDSKENLSQE--ESQNVDGPSSESSQEANLSSQ------- 333
Query: 757 SEDSEAMEEGDAESSVCPRCCCHRPQESQRRTSRCSDEERPSTSRACVVNGPDGTRSAFS 816
SE+ EE +ES R TS D+E +S S
Sbjct: 334 ENSSESQEEVVSES---------RGDNPDPTTSYVEDQEDSDSS------------EEDS 372
Query: 817 FRTLPQGGSSGPAHDERTNGSGSGATGEDRRGSSQPESCDVQSNEDYPRRPLT-RARSRL 875
TL S + +E+ + S + PE + S E + ++S
Sbjct: 373 SHTLSH--SKSESREEQADSESSESLNFSEESPESPEDENSSSQEGLQSHSSSAESQSEE 430
Query: 876 SHVLLVSESEVAKTKPRHAMKRKRTADKSTSTSDPVIEDDHVQVLVLKSKNLVGVTMTNC 935
SH SE + + ++ K + +S S+S+ ED ++ + ++S+ L N
Sbjct: 431 SH----SEEDDSDSQDSSRSKEDSNSTESKSSSE---EDGQLKNIEIESRKLTVDAYHNK 483
Query: 936 GITDLVLKDC 945
I D DC
Sbjct: 484 PIGDQDDNDC 493
>gi|207113164 Treacher Collins-Franceschetti syndrome 1 isoform f
[Homo sapiens]
Length = 1412
Score = 38.5 bits (88), Expect = 0.038
Identities = 48/174 (27%), Positives = 71/174 (40%), Gaps = 16/174 (9%)
Query: 597 DSESDDEEDSLELQEVWIPKNGTRRYSEREEKTGESVQSRELSVSGKGKTPLRKRYNSHQ 656
DSES EE S + + +P T +E+ G +Q++ S KG P + + Q
Sbjct: 467 DSESSSEESS-DSSDGEVP---TAVAPAQEKSLGNILQAKPTSSPAKGP-PQKAGPVAVQ 521
Query: 657 MGQSKQFPLEESSCEKGCQVTSEQIKADMKAARDIPEKK-KNKDVYPSCSSTTASTVGNS 715
+ K ESS E SE+ A M AA+ P K P ++TTAS
Sbjct: 522 VKAEKPMDNSESSEESSDSADSEEAPAAMTAAQAKPALKIPQTKACPKKTNTTAS--AKV 579
Query: 716 SSHNTASQSPDFVRTVNSGGSSEPSPTEVDVSRQCACSPGGSEDSEAMEEGDAE 769
+ +Q+P T S S P+ + +EDS + EE D+E
Sbjct: 580 APVRVGTQAPRKAGTATSPAGSSPA--------VAGGTQRPAEDSSSSEESDSE 625
>gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e
[Homo sapiens]
Length = 1451
Score = 38.5 bits (88), Expect = 0.038
Identities = 48/174 (27%), Positives = 71/174 (40%), Gaps = 16/174 (9%)
Query: 597 DSESDDEEDSLELQEVWIPKNGTRRYSEREEKTGESVQSRELSVSGKGKTPLRKRYNSHQ 656
DSES EE S + + +P T +E+ G +Q++ S KG P + + Q
Sbjct: 544 DSESSSEESS-DSSDGEVP---TAVAPAQEKSLGNILQAKPTSSPAKGP-PQKAGPVAVQ 598
Query: 657 MGQSKQFPLEESSCEKGCQVTSEQIKADMKAARDIPEKK-KNKDVYPSCSSTTASTVGNS 715
+ K ESS E SE+ A M AA+ P K P ++TTAS
Sbjct: 599 VKAEKPMDNSESSEESSDSADSEEAPAAMTAAQAKPALKIPQTKACPKKTNTTAS--AKV 656
Query: 716 SSHNTASQSPDFVRTVNSGGSSEPSPTEVDVSRQCACSPGGSEDSEAMEEGDAE 769
+ +Q+P T S S P+ + +EDS + EE D+E
Sbjct: 657 APVRVGTQAPRKAGTATSPAGSSPA--------VAGGTQRPAEDSSSSEESDSE 702
>gi|207113160 Treacher Collins-Franceschetti syndrome 1 isoform d
[Homo sapiens]
Length = 1488
Score = 38.5 bits (88), Expect = 0.038
Identities = 48/174 (27%), Positives = 71/174 (40%), Gaps = 16/174 (9%)
Query: 597 DSESDDEEDSLELQEVWIPKNGTRRYSEREEKTGESVQSRELSVSGKGKTPLRKRYNSHQ 656
DSES EE S + + +P T +E+ G +Q++ S KG P + + Q
Sbjct: 544 DSESSSEESS-DSSDGEVP---TAVAPAQEKSLGNILQAKPTSSPAKGP-PQKAGPVAVQ 598
Query: 657 MGQSKQFPLEESSCEKGCQVTSEQIKADMKAARDIPEKK-KNKDVYPSCSSTTASTVGNS 715
+ K ESS E SE+ A M AA+ P K P ++TTAS
Sbjct: 599 VKAEKPMDNSESSEESSDSADSEEAPAAMTAAQAKPALKIPQTKACPKKTNTTAS--AKV 656
Query: 716 SSHNTASQSPDFVRTVNSGGSSEPSPTEVDVSRQCACSPGGSEDSEAMEEGDAE 769
+ +Q+P T S S P+ + +EDS + EE D+E
Sbjct: 657 APVRVGTQAPRKAGTATSPAGSSPA--------VAGGTQRPAEDSSSSEESDSE 702
>gi|57164975 Treacher Collins-Franceschetti syndrome 1 isoform b
[Homo sapiens]
Length = 1411
Score = 38.5 bits (88), Expect = 0.038
Identities = 48/174 (27%), Positives = 71/174 (40%), Gaps = 16/174 (9%)
Query: 597 DSESDDEEDSLELQEVWIPKNGTRRYSEREEKTGESVQSRELSVSGKGKTPLRKRYNSHQ 656
DSES EE S + + +P T +E+ G +Q++ S KG P + + Q
Sbjct: 467 DSESSSEESS-DSSDGEVP---TAVAPAQEKSLGNILQAKPTSSPAKGP-PQKAGPVAVQ 521
Query: 657 MGQSKQFPLEESSCEKGCQVTSEQIKADMKAARDIPEKK-KNKDVYPSCSSTTASTVGNS 715
+ K ESS E SE+ A M AA+ P K P ++TTAS
Sbjct: 522 VKAEKPMDNSESSEESSDSADSEEAPAAMTAAQAKPALKIPQTKACPKKTNTTAS--AKV 579
Query: 716 SSHNTASQSPDFVRTVNSGGSSEPSPTEVDVSRQCACSPGGSEDSEAMEEGDAE 769
+ +Q+P T S S P+ + +EDS + EE D+E
Sbjct: 580 APVRVGTQAPRKAGTATSPAGSSPA--------VAGGTQRPAEDSSSSEESDSE 625
>gi|57164977 Treacher Collins-Franceschetti syndrome 1 isoform a
[Homo sapiens]
Length = 1450
Score = 38.5 bits (88), Expect = 0.038
Identities = 48/174 (27%), Positives = 71/174 (40%), Gaps = 16/174 (9%)
Query: 597 DSESDDEEDSLELQEVWIPKNGTRRYSEREEKTGESVQSRELSVSGKGKTPLRKRYNSHQ 656
DSES EE S + + +P T +E+ G +Q++ S KG P + + Q
Sbjct: 544 DSESSSEESS-DSSDGEVP---TAVAPAQEKSLGNILQAKPTSSPAKGP-PQKAGPVAVQ 598
Query: 657 MGQSKQFPLEESSCEKGCQVTSEQIKADMKAARDIPEKK-KNKDVYPSCSSTTASTVGNS 715
+ K ESS E SE+ A M AA+ P K P ++TTAS
Sbjct: 599 VKAEKPMDNSESSEESSDSADSEEAPAAMTAAQAKPALKIPQTKACPKKTNTTAS--AKV 656
Query: 716 SSHNTASQSPDFVRTVNSGGSSEPSPTEVDVSRQCACSPGGSEDSEAMEEGDAE 769
+ +Q+P T S S P+ + +EDS + EE D+E
Sbjct: 657 APVRVGTQAPRKAGTATSPAGSSPA--------VAGGTQRPAEDSSSSEESDSE 702
>gi|57164979 Treacher Collins-Franceschetti syndrome 1 isoform c
[Homo sapiens]
Length = 958
Score = 38.5 bits (88), Expect = 0.038
Identities = 48/174 (27%), Positives = 71/174 (40%), Gaps = 16/174 (9%)
Query: 597 DSESDDEEDSLELQEVWIPKNGTRRYSEREEKTGESVQSRELSVSGKGKTPLRKRYNSHQ 656
DSES EE S + + +P T +E+ G +Q++ S KG P + + Q
Sbjct: 544 DSESSSEESS-DSSDGEVP---TAVAPAQEKSLGNILQAKPTSSPAKGP-PQKAGPVAVQ 598
Query: 657 MGQSKQFPLEESSCEKGCQVTSEQIKADMKAARDIPEKK-KNKDVYPSCSSTTASTVGNS 715
+ K ESS E SE+ A M AA+ P K P ++TTAS
Sbjct: 599 VKAEKPMDNSESSEESSDSADSEEAPAAMTAAQAKPALKIPQTKACPKKTNTTAS--AKV 656
Query: 716 SSHNTASQSPDFVRTVNSGGSSEPSPTEVDVSRQCACSPGGSEDSEAMEEGDAE 769
+ +Q+P T S S P+ + +EDS + EE D+E
Sbjct: 657 APVRVGTQAPRKAGTATSPAGSSPA--------VAGGTQRPAEDSSSSEESDSE 702
>gi|110618248 mucin and cadherin-like isoform 1 [Homo sapiens]
Length = 845
Score = 38.5 bits (88), Expect = 0.038
Identities = 44/165 (26%), Positives = 62/165 (37%), Gaps = 27/165 (16%)
Query: 692 PEKKKNKDVYPSCSSTTASTVG--NSSSHNTASQSPDFVRTVNSGGSSEPSPTEV--DVS 747
P + P SST G NS+SH A+ D +T G +S+P P V S
Sbjct: 502 PHPPSGTTLRPPTSSTPGGPPGAENSTSHQPATPGGDTAQTPKPG-TSQPMPPGVGTSTS 560
Query: 748 RQCACSPGGSEDSEAMEEGDAESSVCPRCCCHRPQESQRRTSRCSDEERPSTSRACVVNG 807
Q A GG+ ++ E G ++ P TS P G
Sbjct: 561 HQPATPSGGT--AQTPEPGTSQ-----------PMPPSMGTSTSHQPATPG-------GG 600
Query: 808 PDGTRSAFSFRTLPQGGSSGPAHDERTNGSGSGATGEDRRGSSQP 852
T A + + +P G + +H T G G+ T E G+SQP
Sbjct: 601 TAQTPEAGTSQPMPPGMGTSTSHQPTTPGGGTAQTPEP--GTSQP 643
>gi|7656879 ALL1 fused gene from 5q31 [Homo sapiens]
Length = 1163
Score = 38.1 bits (87), Expect = 0.050
Identities = 47/192 (24%), Positives = 70/192 (36%), Gaps = 22/192 (11%)
Query: 615 PKNGTRRYSEREEKTGESVQSRELSVSGKGKTPLRKRYNSHQMGQSKQFPLEESSCEKGC 674
PK + E+ + + S ++S GK K K + ++ +SK+ P E G
Sbjct: 737 PKGEKKNVPEKHTREAQKQASEKVSNKGKRK---HKNEDDNRASESKK-PKTEDKNSAGH 792
Query: 675 QVTSEQIKADMKAARDIPEKKKNKDVYPSCSSTTAST---VGNSSSHNTASQSPDFVRTV 731
+ +S + + AA K KD+ PS + S + S T SQS +
Sbjct: 793 KPSSNRESSKQSAA-------KEKDLLPSPAGPVPSKDPKTEHGSRKRTISQSSSLKSSS 845
Query: 732 NS-----GGSSEPSPTEVDVSRQCACSPGGSEDSEAMEEGDAESSVCPRCCCHRPQESQR 786
NS G S S T + S S E E+ + SS CP R
Sbjct: 846 NSNKETSGSSKNSSSTSKQKKTEGKTS---SSSKEVKEKAPSSSSNCPPSAPTLDSSKPR 902
Query: 787 RTSRCSDEERPS 798
RT D+ S
Sbjct: 903 RTKLVFDDRNYS 914
>gi|33356174 pinin, desmosome associated protein [Homo sapiens]
Length = 717
Score = 37.7 bits (86), Expect = 0.066
Identities = 65/310 (20%), Positives = 123/310 (39%), Gaps = 56/310 (18%)
Query: 522 ENDFRQDLQPGEQQFAADALNEMEDIVQEDGEVV----------AESGNNTPAHSQAIIP 571
E++ +QD QP E + + ++ ++ D EV+ +E+ + +
Sbjct: 374 ESEKQQDSQPEEVMDVLEMVENVKHVIA-DQEVMETNRVESVEPSENEASKELEPEMEFE 432
Query: 572 VDVDEEQAGPSGLQRVVKPTSITVHDSESDDEEDSLELQEVWIPKNGTRRYSEREEKTGE 631
++ D+E S + V + E +++E + + V P+ ++ + + ++
Sbjct: 433 IEPDKECKSLSPGKENVSALDMEKESEEKEEKESEPQPEPVAQPQPQSQPQLQLQSQSQP 492
Query: 632 SVQSR------ELSVSGKGKTPLRKRYNSHQMGQSKQFPLE-----ESSCEKGCQVTSEQ 680
+QS+ +LS++ TP + H + + K FP+E E E V E
Sbjct: 493 VLQSQPPSQPEDLSLAVLQPTPQVTQEQGHLLPERKDFPVESVKLTEVPVEPVLTVHPES 552
Query: 681 IKADMKA-------ARDIPEKKKNKDVYPSCSS---TTASTVGNSSSHNTASQSPDFVRT 730
K+ K AR+ K +++ S SS T++S+ +SSS +++S+S
Sbjct: 553 -KSKTKTRSRSRGRARNKTSKSRSRSSSSSSSSSSSTSSSSGSSSSSGSSSSRS------ 605
Query: 731 VNSGGSSEPSPTEVDVSRQCACSPGGSEDSEAMEEGDAESSVCPRCCCHRPQESQRRTSR 790
SS S T SR + S S +S + G R R+ R
Sbjct: 606 ----SSSSSSSTSGSSSRDSSSSTSSSSESRSRSRG-------------RGHNRDRKHRR 648
Query: 791 CSDEERPSTS 800
D +R TS
Sbjct: 649 SVDRKRRDTS 658
Score = 31.6 bits (70), Expect = 4.7
Identities = 71/350 (20%), Positives = 128/350 (36%), Gaps = 30/350 (8%)
Query: 521 EENDFRQDLQPGEQQFA--ADALNEMEDIVQEDGEVVAESGNNTPAHSQAIIPVDVDEEQ 578
E R + Q EQ+ A E+E+ + +V E AI+ D ++EQ
Sbjct: 294 EHQVVRNEEQKAEQEEGKVAQREEELEETGNQHNDVEIEEAGEEEEKEIAIVHSDAEKEQ 353
Query: 579 AGPSGLQRV-VKPTSIT-VHDSESDDEEDSLELQEVW-IPKNGTRRYSEREEKTGESVQS 635
Q + VK T V +SE + E+ +V + +N +++E V+S
Sbjct: 354 EEEEQKQEMEVKMEEETEVRESEKQQDSQPEEVMDVLEMVENVKHVIADQEVMETNRVES 413
Query: 636 RELSVSGKGKTPLRKRYNSHQMGQSKQFPLEESSCEKGCQVTSEQIKA-DMKAARDIPEK 694
E S + K ++ +F +E K E + A DM+ + E+
Sbjct: 414 VEPSENEASK----------ELEPEMEFEIEPDKECKSLSPGKENVSALDMEKESEEKEE 463
Query: 695 KKNKD-----VYPSCSSTTASTVGNSSSHNTASQSPDFVRTVNSGGSSEPSPTEVDVSRQ 749
K+++ P S + + S SQ P + S +P+P V+++
Sbjct: 464 KESEPQPEPVAQPQPQSQPQLQLQSQSQPVLQSQPPSQPEDL-SLAVLQPTP---QVTQE 519
Query: 750 CACSPGGSEDSEAMEEGDAESSVCPRCCCHRPQESQRRT-----SRCSDEERPSTSRACV 804
+D E V P H +S+ +T R ++ S SR+
Sbjct: 520 QGHLLPERKDFPVESVKLTEVPVEPVLTVHPESKSKTKTRSRSRGRARNKTSKSRSRSSS 579
Query: 805 VNGPDGTRSAFSFRTLPQGGSSGPAHDERTNGSGSGATGEDRRGSSQPES 854
+ + ++ S + GSS ++ S SG++ D S+ S
Sbjct: 580 SSSSSSSSTSSSSGSSSSSGSSSSRSSSSSSSSTSGSSSRDSSSSTSSSS 629
>gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens]
Length = 709
Score = 37.7 bits (86), Expect = 0.066
Identities = 66/287 (22%), Positives = 94/287 (32%), Gaps = 52/287 (18%)
Query: 599 ESDDEEDSLELQEVWIPKNGTRRYSEREEKTG-----ESVQSREL--------------S 639
E DDE + E ++ K G++R S+R E T SV SR+L
Sbjct: 25 EQDDELYNPESEQDKNEKKGSKRKSDRMESTDTKRQKPSVHSRQLVSKPLSSSVSNNKRI 84
Query: 640 VSGKGKTPLRKRYNSHQMGQSKQFPLEESSCEKGCQVTSEQIK--ADMKAARDIPEKKKN 697
VS KGK+ + +Q + + + + E K + R +++
Sbjct: 85 VSTKGKSATEYKNEEYQRSERNKRLDADRKIRLSSSASREPYKNQPEKTCVRKRDPERRA 144
Query: 698 KDVYPSCS-------STTASTVGNSSSHNTASQSPDFVRTVNSGGSS---------EPSP 741
K P S AS SS S+ S GSS E
Sbjct: 145 KSPTPDGSERIGLEVDRRASRSSQSSKEEVNSEEYGSDHETGSSGSSDEQGNNTENEEEG 204
Query: 742 TEVDVSRQCACSPGGSEDSEAMEEGDAESSVCPRCCCHRPQESQRRTSRCSDEERPSTSR 801
E DV ED E E+G+ E +E + +EE R
Sbjct: 205 VEEDVEEDEEVEEDAEEDEEVDEDGEEE---------EEEEEEEEEEEEEEEEEYEQDER 255
Query: 802 ACVVNGPD-GTRSAFSFRTLPQGGSSGPAHDERTNGSGSGATGEDRR 847
G D TRS S GS + + + SGSG G D +
Sbjct: 256 DQKEEGNDYDTRSEAS-----DSGSESVSFTDGSVRSGSGTDGSDEK 297
>gi|63054848 coiled-coil domain containing 34 isoform 1 [Homo
sapiens]
Length = 373
Score = 37.4 bits (85), Expect = 0.086
Identities = 41/202 (20%), Positives = 81/202 (40%), Gaps = 27/202 (13%)
Query: 510 DNNHHHPDDSDEENDFRQDLQPGEQQFAADALNEMEDIVQEDGEVVAESGNNTPAHSQAI 569
D + +D D+E D +D E + A+ L ME +Q ES NN Q
Sbjct: 81 DGDGEDEEDVDDEEDVDEDAHDSEAKVAS--LRGME--LQGCASTQVESENNQEEQKQVR 136
Query: 570 IP-----------VDVDEEQAGPSGLQRVVKPTSITVHDSESDDEED----SLELQEVWI 614
+P + ++E+ L+ + + E ++ E + E + W+
Sbjct: 137 LPESRLTPWEVWFIGKEKEERDRLQLKALEELNQQLEKRKEMEEREKRKIIAEEKHKEWV 196
Query: 615 PKNGTRRYSEREEKTGESVQSRELSVSGKGKTPLRKRYNSHQMGQSKQFPLEESSCEKGC 674
K ++ ERE+K + ++ K L K Y + + Q L++ + E+ C
Sbjct: 197 QKKNEQKRKEREQKINKEMEE-------KAAKELEKEYLQEKAKEKYQEWLKKKNAEE-C 248
Query: 675 QVTSEQIKADMKAARDIPEKKK 696
+ ++ + + + +I EKK+
Sbjct: 249 ERKKKEKEKEKQQQAEIQEKKE 270
>gi|224548936 hypothetical protein LOC100170229 [Homo sapiens]
Length = 715
Score = 37.0 bits (84), Expect = 0.11
Identities = 64/291 (21%), Positives = 99/291 (34%), Gaps = 26/291 (8%)
Query: 633 VQSRELSVSGKGKTPLRKRYNSHQMGQSKQFPLEESSCEKGCQVTSEQIKADMKAARDIP 692
+ SRE S S T + R S+ ++ P S + S K R
Sbjct: 250 IPSREKSYS---PTEMSSRVKSYNQASTRSRPQSHSQSRSPRRSRSGSQKRTHSRVRSHS 306
Query: 693 EKKKNKDVYPSCSSTTASTVGNSSSHNTASQ--SPDFVRTVNSGGSSEPSPTEVDVSRQC 750
K+ + S +G S + S+ S + RT G S + SR
Sbjct: 307 WKRNHSRARSRTRKGILSQMGRHSQSRSHSKGKSQNQSRTPRRGRSH-------NWSRNP 359
Query: 751 ACSPGGSEDSEAMEEGDAESSVCPRCCCHRPQESQRRTSRCSDEERPSTSRACVVNGPDG 810
+ S + +E D S PR +ES R S +++R + D
Sbjct: 360 SKERSHSHSRSSSKERDHRGSSSPR------KESGRSQSGSPNKQRDHSRSRSPNKARDR 413
Query: 811 TRSAFSFRTLPQGGSSGPAHDERTNGSGSGATGEDRRGSSQPESCDVQSNEDYPRRPLTR 870
+RS ++ + S P + S S DR S P S P + R
Sbjct: 414 SRSRSPYKARDRSRSRSPNKARDCSRSRSPYKARDRSRSRSPNKARDHSRSRSPNKARDR 473
Query: 871 ARSR-----LSHVLLVSESEVAKTKPRHAMKRKRTADKSTSTSDPVIEDDH 916
+RSR H L S S+ + + ++R +S S+S E DH
Sbjct: 474 SRSRSPSKERDHSQLGSPSKERDHRRSRSPSKERQCRQSRSSSK---ERDH 521
Score = 35.0 bits (79), Expect = 0.43
Identities = 55/239 (23%), Positives = 86/239 (35%), Gaps = 13/239 (5%)
Query: 642 GKGKTPLRKRYNSHQMGQSKQF--PLEESSCEKGCQVTSEQIKADMKAARDIPEKKKNKD 699
G+ +T R+R +S SK+ P S + ++ A + IP K+K+ +
Sbjct: 174 GRPRTSNRERSDSQPRNLSKKSYRPPGGSGIGRSSELAVTPSTAKCQTPTGIPSKEKSDN 233
Query: 700 VYPSCSSTTAS----TVGNSSSHNTASQSPDFVRTVNSGGSSEPSPTEVDVSRQCACSPG 755
PS S S + + + ++ V++ N S+ P SR S
Sbjct: 234 PSPSSSRKVKSYGQMIIPSREKSYSPTEMSSRVKSYNQA-STRSRPQSHSQSRSPRRSRS 292
Query: 756 GSEDSEAMEEGDAESSVCPRCCCHRPQESQRRTSRCSDEERPSTSRACVVNGPDGTRSAF 815
GS+ S R H S+ R S R S SR+ G +S
Sbjct: 293 GSQKRT---HSRVRSHSWKRN--HSRARSRTRKGILSQMGRHSQSRSHS-KGKSQNQSRT 346
Query: 816 SFRTLPQGGSSGPAHDERTNGSGSGATGEDRRGSSQPESCDVQSNEDYPRRPLTRARSR 874
R S P+ + + S S + D RGSS P +S P + +RSR
Sbjct: 347 PRRGRSHNWSRNPSKERSHSHSRSSSKERDHRGSSSPRKESGRSQSGSPNKQRDHSRSR 405
Score = 32.7 bits (73), Expect = 2.1
Identities = 55/239 (23%), Positives = 89/239 (37%), Gaps = 33/239 (13%)
Query: 621 RYSEREEKTGESVQSRELSVSGKGKTPLRKRYNS--HQMGQSKQFPLEESSCEKGCQVTS 678
R R + Q R+ S K + R R S Q QS+ P +E + +
Sbjct: 495 RDHRRSRSPSKERQCRQSRSSSKERDHRRSRSPSKERQRRQSRS-PNKERDRSQSRSPSE 553
Query: 679 EQIKADMKAARDIPEKKKNKDVYPSCSSTTASTVGNSSSH---NTASQSPDFVRTVNSGG 735
E+ ++ P K++++ + S S SSS ++ S+SP+ G
Sbjct: 554 EREHRQSRS----PSKERDRRRWRSPSKERERRQSRSSSEERDHSRSRSPN-----KQSG 604
Query: 736 SSEPSPTEVDVSRQCACSPGG----SEDSEAMEEGDAESSVCPRCCCHRPQESQRRTSRC 791
S P + + + + +P S+ + +E D S PR + S RTS
Sbjct: 605 YSRPRASSKEKAHSRSRTPSKEGNHSQSRTSSKESDPSQSTVPRSPDWK--RSPTRTSSL 662
Query: 792 SDEERPSTSRACVVNGPDGTRSAFSFRTLPQGGSSGPAHDERTNGSGSGATGEDRRGSS 850
S PS + S+ S T P GG + D + + + S AT R SS
Sbjct: 663 SQNRTPSKT------------SSHSPSTFPSGGQTLSQDDSQADATTSKATLPGERSSS 709
>gi|239744133 PREDICTED: hypothetical protein [Homo sapiens]
Length = 375
Score = 36.6 bits (83), Expect = 0.15
Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 26/150 (17%)
Query: 703 SCSSTTASTVGNS--SSHNTASQSPDFVRTVNSGGSSEPSPTEVDVSRQCACSPGGSEDS 760
SC S+ S+ S SS +++ S RT ++ S + S T S C+C G+ +
Sbjct: 237 SCQSSGTSSTSCSWQSSRTSSTCSCQSSRTSSTSCSCQSSGT----SSTCSCQSSGTSST 292
Query: 761 EAMEEGDAESSVCP---------RCCCHRPQESQRRTSRCSDEERPSTSRACVV--NGPD 809
+ SS C C C +S R +S CS + ++S +C+ +G
Sbjct: 293 SCSCQSSRTSSTCSCQFSRTSSTSCSC----QSSRTSSTCSCQSSGTSSTSCICWSSGTS 348
Query: 810 GTRSAFSFRTLPQGGSSGPAHDERTNGSGS 839
T + F G+S + + R++G+ S
Sbjct: 349 STSCSGRF-----SGTSSTSCNCRSSGTSS 373
Score = 35.4 bits (80), Expect = 0.33
Identities = 42/172 (24%), Positives = 66/172 (38%), Gaps = 20/172 (11%)
Query: 703 SC-SSTTASTVGNSSSHNTASQSPDFVRTVNSGGSSEPSPT--EVDVSRQCACSPGGSED 759
SC SS T+ST N S T+S + S G+S S + S C+C G+
Sbjct: 168 SCQSSGTSSTSCNWQSSRTSSTC-----SCQSSGTSSTSYSCQSSGTSSTCSCQSSGTSS 222
Query: 760 SEAMEEGDAESSVCP-----RCCCHRPQESQRRTSRCSDEERPSTSRACVVNGPDGTRSA 814
+ + SS C +S R +S CS + ++S +C GT S
Sbjct: 223 TSCSCQSSGTSSTCSCQSSGTSSTSCSWQSSRTSSTCSCQSSRTSSTSCSCQS-SGTSST 281
Query: 815 FSFRTLPQGGSSGPAHDERTNG------SGSGATGEDRRGSSQPESCDVQSN 860
S ++ +S RT+ S + +T + S +C QS+
Sbjct: 282 CSCQSSGTSSTSCSCQSSRTSSTCSCQFSRTSSTSCSCQSSRTSSTCSCQSS 333
Score = 33.5 bits (75), Expect = 1.2
Identities = 41/174 (23%), Positives = 65/174 (37%), Gaps = 24/174 (13%)
Query: 703 SCSSTTASTVGNSSSHNTASQSPDFVRT-VNSGGSSEPSPTEVDVSRQCACSPGGSEDSE 761
SC S+ S+ + S T+S S ++ + ++S S + S T S C+C + SE
Sbjct: 30 SCQSSQTSSTCSCQSSGTSSTSCNWQSSRISSTCSCQSSGTS---STSCSC-----QSSE 81
Query: 762 AMEEGDAESSVCPRCCCHRPQESQRRTSRCSDEERPSTSRACVVNGPDG---------TR 812
+SS C T RC STS +C + T
Sbjct: 82 TSSTCSCQSSGTSSTSCSWQFSRTSSTCRCQSSRTSSTSCSCQSSRTSSTSCSCQSSRTS 141
Query: 813 SAFSFRTLPQGGSSGPAHDERTN------GSGSGATGEDRRGSSQPESCDVQSN 860
S S +T +S RT+ SG+ +T + + S +C QS+
Sbjct: 142 STCSCQTSRTSSTSCSYQSSRTSSTCSCQSSGTSSTSCNWQSSRTSSTCSCQSS 195
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,054,962
Number of Sequences: 37866
Number of extensions: 2290829
Number of successful extensions: 8956
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 187
Number of HSP's that attempted gapping in prelim test: 8512
Number of HSP's gapped (non-prelim): 585
length of query: 1188
length of database: 18,247,518
effective HSP length: 113
effective length of query: 1075
effective length of database: 13,968,660
effective search space: 15016309500
effective search space used: 15016309500
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.