Guide to the Human Genome
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Name: G3BP1 Sequence: fasta or formatted (466aa) NCBI GI: 5031703
Description:

Ras-GTPase-activating protein SH3-domain-binding protein

Referenced in:

Ras

Other entries for this name:
alt mRNA [466aa] Ras-GTPase-activating protein SH3-domain-binding protein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.7         22           2
 C cysteine            0.2          1           1
 D aspartate           5.2         24           2
 E glutamate          10.3         48           3
 F phenylalanine       4.1         19           2
 G glycine             8.4         39           3
 H histidine           2.6         12           1
 I isoleucine          3.0         14           1
 K lysine              4.1         19           2
 L leucine             5.4         25           2
 M methionine          2.4         11           1
 N asparagine          4.5         21           3
 P proline            10.5         49           2
 Q glutamine           6.4         30           2
 R arginine            7.9         37           2
 S serine              5.8         27           3
 T threonine           3.0         14           1
 V valine              9.4         44           3
 W tryptophan          0.2          1           1
 Y tyrosine            1.9          9           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Ras-GTPase-activating protein SH3-domain-binding prot... 
G3BP1                 1.000   Ras-GTPase-activating protein SH3-domain-binding pro...
G3BP2                 0.596   Ras-GTPase activating protein SH3 domain-binding pro...
G3BP2                 0.596   Ras-GTPase activating protein SH3 domain-binding pro...
G3BP2                 0.527   Ras-GTPase activating protein SH3 domain-binding pro...
HNRNPA2B1             0.045   heterogeneous nuclear ribonucleoprotein A2/B1 isofor...
HNRNPA2B1             0.045   heterogeneous nuclear ribonucleoprotein A2/B1 isoform...
HNRNPA1               0.045   heterogeneous nuclear ribonucleoprotein A1 isoform b...
HNRNPA1               0.045   heterogeneous nuclear ribonucleoprotein A1 isoform a ...
HNRNPA1L2             0.039   heterogeneous nuclear ribonucleoprotein A1-like [Hom...
HNRNPA1L2             0.039   heterogeneous nuclear ribonucleoprotein A1-like [Hom...
HNRNPA3               0.038   heterogeneous nuclear ribonucleoprotein A3 
TTN                   0.036   titin isoform N2-A 
LOC120364             0.033   PREDICTED: similar to heterogeneous nuclear ribonuc...
LOC120364             0.033   PREDICTED: similar to heterogeneous nuclear ribonucl...
LOC120364             0.033   PREDICTED: similar to heterogeneous nuclear ribonucl...
SFRS9                 0.032   splicing factor, arginine/serine-rich 9 
PELP1                 0.032   proline, glutamic acid and leucine rich protein 1 [...
HNRNPAB               0.031   heterogeneous nuclear ribonucleoprotein A/B isoform ...
HNRNPAB               0.031   heterogeneous nuclear ribonucleoprotein A/B isoform ...
CCNB1                 0.031   cyclin B1 
HNRNPD                0.031   heterogeneous nuclear ribonucleoprotein D isoform b ...
HNRNPD                0.031   heterogeneous nuclear ribonucleoprotein D isoform d ...
HNRNPD                0.029   heterogeneous nuclear ribonucleoprotein D isoform a ...
HNRNPD                0.029   heterogeneous nuclear ribonucleoprotein D isoform c ...
SFRS1                 0.029   splicing factor, arginine/serine-rich 1 isoform 2 [...
SFRS1                 0.029   splicing factor, arginine/serine-rich 1 isoform 1 [Ho...
CIRBP                 0.027   cold inducible RNA binding protein 
RBMX                  0.027   RNA binding motif protein, X-linked 
RBM4                  0.026   RNA binding motif protein 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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