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Search of human proteins with 4506833
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4506833 small inducible cytokine A1 precursor [Homo sapiens]
(96 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4506833 small inducible cytokine A1 precursor [Homo sapiens] 202 5e-53
gi|47824887 chemokine (C-C motif) ligand 4-like 1 precursor [Hom... 58 2e-09
gi|46275832 chemokine (C-C motif) ligand 4-like 2 precursor [Hom... 58 2e-09
gi|4506845 chemokine C-C motif ligand 4 isoform 1 precursor [Hom... 57 3e-09
gi|4885587 small inducible cytokine A13 precursor [Homo sapiens] 57 4e-09
gi|4506843 chemokine (C-C motif) ligand 3 [Homo sapiens] 56 7e-09
gi|27477072 chemokine (C-C motif) ligand 3-like 1 precursor [Hom... 56 7e-09
gi|93589094 chemokine (C-C motif) ligand 3-like 3 precursor [Hom... 56 7e-09
gi|22538816 small inducible cytokine A8 precursor [Homo sapiens] 55 2e-08
gi|13435402 chemokine (C-C motif) ligand 7 precursor [Homo sapiens] 53 5e-08
gi|14589961 chemokine (C-C motif) ligand 14 isoform 1 precursor ... 51 2e-07
gi|14589959 chemokine (C-C motif) ligand 14 isoform 2 precursor ... 50 3e-07
gi|4506827 small inducible cytokine A11 precursor [Homo sapiens] 50 5e-07
gi|5174671 chemokine (C-C motif) ligand 26 precursor [Homo sapiens] 49 7e-07
gi|4506841 small inducible cytokine A2 precursor [Homo sapiens] 47 3e-06
gi|22165427 small inducible cytokine A24 precursor [Homo sapiens] 47 3e-06
gi|14602449 chemokine (C-C motif) ligand 15 precursor [Homo sapi... 46 7e-06
gi|4506831 small inducible cytokine A18 precursor [Homo sapiens] 44 2e-05
gi|22538814 small inducible cytokine A5 precursor [Homo sapiens] 43 5e-05
gi|22538808 small inducible cytokine A23 isoform CKbeta8 precurs... 42 1e-04
gi|22538806 small inducible cytokine A23 isoform CKbeta8-1 precu... 42 1e-04
gi|4759074 small inducible cytokine A16 precursor [Homo sapiens] 40 4e-04
gi|22538804 small inducible cytokine A22 precursor [Homo sapiens] 39 7e-04
gi|4506829 small inducible cytokine A17 precursor [Homo sapiens] 36 0.008
gi|4506855 chemokine (C motif) ligand 2 [Homo sapiens] 34 0.022
gi|4506853 chemokine (C motif) ligand 1 [Homo sapiens] 34 0.029
gi|5454040 small inducible cytokine A19 precursor [Homo sapiens] 34 0.029
gi|4506835 small inducible cytokine A21 precursor [Homo sapiens] 34 0.029
gi|169234949 CWF19-like 2, cell cycle control [Homo sapiens] 29 0.92
gi|10834978 interleukin 8 precursor [Homo sapiens] 28 1.2
>gi|4506833 small inducible cytokine A1 precursor [Homo sapiens]
Length = 96
Score = 202 bits (514), Expect = 5e-53
Identities = 96/96 (100%), Positives = 96/96 (100%)
Query: 1 MQIITTALVCLLLAGMWPEDVDSKSMQVPFSRCCFSFAEQEIPLRAILCYRNTSSICSNE 60
MQIITTALVCLLLAGMWPEDVDSKSMQVPFSRCCFSFAEQEIPLRAILCYRNTSSICSNE
Sbjct: 1 MQIITTALVCLLLAGMWPEDVDSKSMQVPFSRCCFSFAEQEIPLRAILCYRNTSSICSNE 60
Query: 61 GLIFKLKRGKEACALDTVGWVQRHRKMLRHCPSKRK 96
GLIFKLKRGKEACALDTVGWVQRHRKMLRHCPSKRK
Sbjct: 61 GLIFKLKRGKEACALDTVGWVQRHRKMLRHCPSKRK 96
>gi|47824887 chemokine (C-C motif) ligand 4-like 1 precursor [Homo
sapiens]
Length = 92
Score = 57.8 bits (138), Expect = 2e-09
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 1 MQIITTALVCLLLAGMWPEDVDSKSM-QVPFSRCCFSFAEQEIPLRAILCYRNTSSICSN 59
M++ T L L+L + S M P + CCFS+ +++P ++ Y TSS+CS
Sbjct: 1 MKLCVTVLSLLVLVAAFCSLALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ 60
Query: 60 EGLIFKLKRGKEACALDTVGWVQRH 84
++F+ KRGK+ CA + WVQ +
Sbjct: 61 PAVVFQTKRGKQVCADPSESWVQEY 85
>gi|46275832 chemokine (C-C motif) ligand 4-like 2 precursor [Homo
sapiens]
Length = 92
Score = 57.8 bits (138), Expect = 2e-09
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 1 MQIITTALVCLLLAGMWPEDVDSKSM-QVPFSRCCFSFAEQEIPLRAILCYRNTSSICSN 59
M++ T L L+L + S M P + CCFS+ +++P ++ Y TSS+CS
Sbjct: 1 MKLCVTVLSLLVLVAAFCSLALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ 60
Query: 60 EGLIFKLKRGKEACALDTVGWVQRH 84
++F+ KRGK+ CA + WVQ +
Sbjct: 61 PAVVFQTKRGKQVCADPSESWVQEY 85
>gi|4506845 chemokine C-C motif ligand 4 isoform 1 precursor [Homo
sapiens]
Length = 92
Score = 57.0 bits (136), Expect = 3e-09
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 1 MQIITTALVCLLLAGMWPEDVDSKSM-QVPFSRCCFSFAEQEIPLRAILCYRNTSSICSN 59
M++ T L L+L + S M P + CCFS+ +++P ++ Y TSS+CS
Sbjct: 1 MKLCVTVLSLLMLVAAFCSPALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ 60
Query: 60 EGLIFKLKRGKEACALDTVGWVQRH 84
++F+ KR K+ CA + WVQ +
Sbjct: 61 PAVVFQTKRSKQVCADPSESWVQEY 85
>gi|4885587 small inducible cytokine A13 precursor [Homo sapiens]
Length = 98
Score = 56.6 bits (135), Expect = 4e-09
Identities = 33/88 (37%), Positives = 51/88 (57%), Gaps = 4/88 (4%)
Query: 4 ITTALVCLLL--AGMWPEDV-DSKSMQVPFSRCCFSFAEQEIPLRAILCYRNTSSICSNE 60
++ L+CLLL A P+ + ++ VP S CCF+F+ ++I L+ + Y T+S C +
Sbjct: 3 VSAVLLCLLLMTAAFNPQGLAQPDALNVP-STCCFTFSSKKISLQRLKSYVITTSRCPQK 61
Query: 61 GLIFKLKRGKEACALDTVGWVQRHRKML 88
+IF+ K GKE CA WVQ + K L
Sbjct: 62 AVIFRTKLGKEICADPKEKWVQNYMKHL 89
>gi|4506843 chemokine (C-C motif) ligand 3 [Homo sapiens]
Length = 92
Score = 55.8 bits (133), Expect = 7e-09
Identities = 30/84 (35%), Positives = 42/84 (50%)
Query: 1 MQIITTALVCLLLAGMWPEDVDSKSMQVPFSRCCFSFAEQEIPLRAILCYRNTSSICSNE 60
MQ+ T AL LL + + CCFS+ ++IP I Y TSS CS
Sbjct: 1 MQVSTAALAVLLCTMALCNQFSASLAADTPTACCFSYTSRQIPQNFIADYFETSSQCSKP 60
Query: 61 GLIFKLKRGKEACALDTVGWVQRH 84
G+IF KR ++ CA + WVQ++
Sbjct: 61 GVIFLTKRSRQVCADPSEEWVQKY 84
>gi|27477072 chemokine (C-C motif) ligand 3-like 1 precursor [Homo
sapiens]
Length = 93
Score = 55.8 bits (133), Expect = 7e-09
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 1 MQIITTALVCLLLAGMWPEDVDSKSMQVPF-SRCCFSFAEQEIPLRAILCYRNTSSICSN 59
MQ+ T AL LL V S + + CCFS+ ++IP I Y TSS CS
Sbjct: 1 MQVSTAALAVLLCTMALCNQVLSAPLAADTPTACCFSYTSRQIPQNFIADYFETSSQCSK 60
Query: 60 EGLIFKLKRGKEACALDTVGWVQRH 84
+IF KRG++ CA + WVQ++
Sbjct: 61 PSVIFLTKRGRQVCADPSEEWVQKY 85
>gi|93589094 chemokine (C-C motif) ligand 3-like 3 precursor [Homo
sapiens]
Length = 93
Score = 55.8 bits (133), Expect = 7e-09
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 1 MQIITTALVCLLLAGMWPEDVDSKSMQVPF-SRCCFSFAEQEIPLRAILCYRNTSSICSN 59
MQ+ T AL LL V S + + CCFS+ ++IP I Y TSS CS
Sbjct: 1 MQVSTAALAVLLCTMALCNQVLSAPLAADTPTACCFSYTSRQIPQNFIADYFETSSQCSK 60
Query: 60 EGLIFKLKRGKEACALDTVGWVQRH 84
+IF KRG++ CA + WVQ++
Sbjct: 61 PSVIFLTKRGRQVCADPSEEWVQKY 85
>gi|22538816 small inducible cytokine A8 precursor [Homo sapiens]
Length = 99
Score = 54.7 bits (130), Expect = 2e-08
Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 4 ITTALVCLLL--AGMWPEDV-DSKSMQVPFSRCCFSFAEQEIPLRAILCYRNTSSI-CSN 59
++ AL+CLLL A P+ + S+ +P + CCF+ ++IP++ + Y ++I C
Sbjct: 3 VSAALLCLLLMAATFSPQGLAQPDSVSIPIT-CCFNVINRKIPIQRLESYTRITNIQCPK 61
Query: 60 EGLIFKLKRGKEACALDTVGWVQRHRKML 88
E +IFK KRGKE CA WV+ K L
Sbjct: 62 EAVIFKTKRGKEVCADPKERWVRDSMKHL 90
>gi|13435402 chemokine (C-C motif) ligand 7 precursor [Homo
sapiens]
Length = 99
Score = 53.1 bits (126), Expect = 5e-08
Identities = 34/87 (39%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Query: 5 TTALVCLLL--AGMWPEDVDSKSMQVPFSRCCFSFAEQEIPLRAILCYRNT-SSICSNEG 61
+ AL+CLLL A P+ + + CC+ F ++IP + + YR T SS C E
Sbjct: 4 SAALLCLLLTAAAFSPQGLAQPVGINTSTTCCYRFINKKIPKQRLESYRRTTSSHCPREA 63
Query: 62 LIFKLKRGKEACALDTVGWVQRHRKML 88
+IFK K KE CA T WVQ K L
Sbjct: 64 VIFKTKLDKEICADPTQKWVQDFMKHL 90
>gi|14589961 chemokine (C-C motif) ligand 14 isoform 1 precursor
[Homo sapiens]
Length = 93
Score = 51.2 bits (121), Expect = 2e-07
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 1 MQIITTALVCLLLAGMWPEDVDSKSMQVPF--SRCCFSFAEQEIPLRAILCYRNTSSICS 58
M+I A+ LL + S + P+ S CCF++ +IP + I+ Y T+S CS
Sbjct: 1 MKISVAAIPFFLLITIALGTKTESSSRGPYHPSECCFTYTTYKIPRQRIMDYYETNSQCS 60
Query: 59 NEGLIFKLKRGKEACALDTVGWVQRHRKMLR 89
G++F KRG C + WVQ + K ++
Sbjct: 61 KPGIVFITKRGHSVCTNPSDKWVQDYIKDMK 91
>gi|14589959 chemokine (C-C motif) ligand 14 isoform 2 precursor
[Homo sapiens]
Length = 109
Score = 50.4 bits (119), Expect = 3e-07
Identities = 22/59 (37%), Positives = 34/59 (57%)
Query: 31 SRCCFSFAEQEIPLRAILCYRNTSSICSNEGLIFKLKRGKEACALDTVGWVQRHRKMLR 89
S CCF++ +IP + I+ Y T+S CS G++F KRG C + WVQ + K ++
Sbjct: 49 SECCFTYTTYKIPRQRIMDYYETNSQCSKPGIVFITKRGHSVCTNPSDKWVQDYIKDMK 107
>gi|4506827 small inducible cytokine A11 precursor [Homo sapiens]
Length = 97
Score = 49.7 bits (117), Expect = 5e-07
Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 1 MQIITTALVCLLLAGMWPEDVDSKSMQVPFSRCCFSFAEQEIPLRAILCYRN-TSSICSN 59
M++ L LL+A + + VP + CCF+ A ++IPL+ + YR TS C
Sbjct: 1 MKVSAALLWLLLIAAAFSPQGLAGPASVP-TTCCFNLANRKIPLQRLESYRRITSGKCPQ 59
Query: 60 EGLIFKLKRGKEACALDTVGWVQRHRKML 88
+ +IFK K K+ CA WVQ K L
Sbjct: 60 KAVIFKTKLAKDICADPKKKWVQDSMKYL 88
>gi|5174671 chemokine (C-C motif) ligand 26 precursor [Homo
sapiens]
Length = 94
Score = 49.3 bits (116), Expect = 7e-07
Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 33 CCFSFAEQEIPLRAILCYRNTSSICSNEGLIFKLKRGKEACALDTVGWVQRHRKMLR 89
CCF ++ + +P + Y TS+ CS +IF KRGK+ C WVQ++ +L+
Sbjct: 33 CCFQYSHKPLPWTWVRSYEFTSNSCSQRAVIFTTKRGKKVCTHPRKKWVQKYISLLK 89
>gi|4506841 small inducible cytokine A2 precursor [Homo sapiens]
Length = 99
Score = 47.0 bits (110), Expect = 3e-06
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 4 ITTALVCLLL--AGMWPEDV-DSKSMQVPFSRCCFSFAEQEIPLRAILCYRN-TSSICSN 59
++ AL+CLLL A P+ + ++ P + CC++F ++I ++ + YR TSS C
Sbjct: 3 VSAALLCLLLIAATFIPQGLAQPDAINAPVT-CCYNFTNRKISVQRLASYRRITSSKCPK 61
Query: 60 EGLIFKLKRGKEACALDTVGWVQ 82
E +IFK KE CA WVQ
Sbjct: 62 EAVIFKTIVAKEICADPKQKWVQ 84
>gi|22165427 small inducible cytokine A24 precursor [Homo sapiens]
Length = 119
Score = 47.0 bits (110), Expect = 3e-06
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Query: 4 ITTALVCLLLAGMWPEDVDSKSMQVPFSRCCFSFAEQEIPLRAILCYRNTS-SICSNEGL 62
+ T + LL G+ + V S CC F + IP ++ Y+ +S S C G+
Sbjct: 4 LMTIVTSLLFLGVCAHHIIPTGSVVIPSPCCMFFVSKRIPENRVVSYQLSSRSTCLKAGV 63
Query: 63 IFKLKRGKEACALDTVGWVQRHRKML 88
IF K+G++ C WVQR+ K L
Sbjct: 64 IFTTKKGQQFCGDPKQEWVQRYMKNL 89
>gi|14602449 chemokine (C-C motif) ligand 15 precursor [Homo
sapiens]
Length = 113
Score = 45.8 bits (107), Expect = 7e-06
Identities = 23/57 (40%), Positives = 31/57 (54%)
Query: 33 CCFSFAEQEIPLRAILCYRNTSSICSNEGLIFKLKRGKEACALDTVGWVQRHRKMLR 89
CC S+ Q IP + Y TSS CS G+IF K+G++ CA + VQ K L+
Sbjct: 53 CCTSYISQSIPCSLMKSYFETSSECSKPGVIFLTKKGRQVCAKPSGPGVQDCMKKLK 109
>gi|4506831 small inducible cytokine A18 precursor [Homo sapiens]
Length = 89
Score = 44.3 bits (103), Expect = 2e-05
Identities = 19/52 (36%), Positives = 28/52 (53%)
Query: 33 CCFSFAEQEIPLRAILCYRNTSSICSNEGLIFKLKRGKEACALDTVGWVQRH 84
CC + +IP + I+ Y TS C G+I KRG++ CA WVQ++
Sbjct: 30 CCLVYTSWQIPQKFIVDYSETSPQCPKPGVILLTKRGRQICADPNKKWVQKY 81
>gi|22538814 small inducible cytokine A5 precursor [Homo sapiens]
Length = 91
Score = 43.1 bits (100), Expect = 5e-05
Identities = 21/84 (25%), Positives = 39/84 (46%)
Query: 1 MQIITTALVCLLLAGMWPEDVDSKSMQVPFSRCCFSFAEQEIPLRAILCYRNTSSICSNE 60
M++ AL +L+A + + CCF++ + +P I Y TS CSN
Sbjct: 1 MKVSAAALAVILIATALCAPASASPYSSDTTPCCFAYIARPLPRAHIKEYFYTSGKCSNP 60
Query: 61 GLIFKLKRGKEACALDTVGWVQRH 84
++F ++ ++ CA WV+ +
Sbjct: 61 AVVFVTRKNRQVCANPEKKWVREY 84
>gi|22538808 small inducible cytokine A23 isoform CKbeta8 precursor
[Homo sapiens]
Length = 120
Score = 42.0 bits (97), Expect = 1e-04
Identities = 21/57 (36%), Positives = 31/57 (54%)
Query: 33 CCFSFAEQEIPLRAILCYRNTSSICSNEGLIFKLKRGKEACALDTVGWVQRHRKMLR 89
CC S+ + IP + Y T+S CS G+IF K+G+ CA + VQ +ML+
Sbjct: 54 CCISYTPRSIPCSLLESYFETNSECSKPGVIFLTKKGRRFCANPSDKQVQVCVRMLK 110
>gi|22538806 small inducible cytokine A23 isoform CKbeta8-1
precursor [Homo sapiens]
Length = 137
Score = 42.0 bits (97), Expect = 1e-04
Identities = 21/57 (36%), Positives = 31/57 (54%)
Query: 33 CCFSFAEQEIPLRAILCYRNTSSICSNEGLIFKLKRGKEACALDTVGWVQRHRKMLR 89
CC S+ + IP + Y T+S CS G+IF K+G+ CA + VQ +ML+
Sbjct: 71 CCISYTPRSIPCSLLESYFETNSECSKPGVIFLTKKGRRFCANPSDKQVQVCVRMLK 127
>gi|4759074 small inducible cytokine A16 precursor [Homo sapiens]
Length = 120
Score = 40.0 bits (92), Expect = 4e-04
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 31 SRCCFSFAEQEIPLRAILCYRNTSSICSNEGLIFKLKRGKEACALDTVGWVQRHRK 86
S CC + E+ +P R ++ YR + C +IF KR +E C WVQ + K
Sbjct: 35 STCCLKYYEKVLPRRLVVGYRKALN-CHLPAIIFVTKRNREVCTNPNDDWVQEYIK 89
>gi|22538804 small inducible cytokine A22 precursor [Homo sapiens]
Length = 93
Score = 39.3 bits (90), Expect = 7e-04
Identities = 21/82 (25%), Positives = 34/82 (41%)
Query: 1 MQIITTALVCLLLAGMWPEDVDSKSMQVPFSRCCFSFAEQEIPLRAILCYRNTSSICSNE 60
+Q ++ LL + + + S CC + +PLR + + TS C
Sbjct: 4 LQTALLVVLVLLAVALQATEAGPYGANMEDSVCCRDYVRYRLPLRVVKHFYWTSDSCPRP 63
Query: 61 GLIFKLKRGKEACALDTVGWVQ 82
G++ R KE CA V WV+
Sbjct: 64 GVVLLTFRDKEICADPRVPWVK 85
>gi|4506829 small inducible cytokine A17 precursor [Homo sapiens]
Length = 94
Score = 35.8 bits (81), Expect = 0.008
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 7 ALVCLLLAGMWPEDVDSKSMQVPFSRCCFSFAEQEIPLRAILCYRNTSSICSNEGLIFKL 66
ALV LLL ++ V CC + + IPLR + + TS CS + ++F
Sbjct: 8 ALVTLLLGASLQHIHAARGTNVG-RECCLEYFKGAIPLRKLKTWYQTSEDCSRDAIVFVT 66
Query: 67 KRGKEACA 74
+G+ C+
Sbjct: 67 VQGRAICS 74
>gi|4506855 chemokine (C motif) ligand 2 [Homo sapiens]
Length = 114
Score = 34.3 bits (77), Expect = 0.022
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
Query: 1 MQIITTAL--VCLLLAGMWPEDVDSKSMQVPFSRCCFSFAEQEIPLRAILCYRNTSSICS 58
M+++ AL +C L A + V+ +V R C S Q +P+ I Y T S
Sbjct: 1 MRLLILALLGICSLTAYI----VEGVGSEVSHRRTCVSLTTQRLPVSRIKTYTITEG--S 54
Query: 59 NEGLIFKLKRGKEACALDTVGWVQ 82
+IF KRG + CA WV+
Sbjct: 55 LRAVIFITKRGLKVCADPQATWVR 78
>gi|4506853 chemokine (C motif) ligand 1 [Homo sapiens]
Length = 114
Score = 33.9 bits (76), Expect = 0.029
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
Query: 1 MQIITTAL--VCLLLAGMWPEDVDSKSMQVPFSRCCFSFAEQEIPLRAILCYRNTSSICS 58
M+++ AL +C L A + V+ +V R C S Q +P+ I Y T S
Sbjct: 1 MRLLILALLGICSLTAYI----VEGVGSEVSDKRTCVSLTTQRLPVSRIKTYTITEG--S 54
Query: 59 NEGLIFKLKRGKEACALDTVGWVQ 82
+IF KRG + CA WV+
Sbjct: 55 LRAVIFITKRGLKVCADPQATWVR 78
>gi|5454040 small inducible cytokine A19 precursor [Homo sapiens]
Length = 98
Score = 33.9 bits (76), Expect = 0.029
Identities = 23/91 (25%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Query: 8 LVCLLLAGMWPEDVDSKSMQVPFSRCCFSFAEQEIPLRAI--LCYRNTSSICSNEGLIFK 65
L+ L L +W + S CC S ++ IP + Y C ++F
Sbjct: 4 LLALSLLVLWTSPAPTLSGTNDAEDCCLSVTQKPIPGYIVRNFHYLLIKDGCRVPAVVFT 63
Query: 66 LKRGKEACALDTVGWVQRHRKMLRHCPSKRK 96
RG++ CA WV+R + L+ +K K
Sbjct: 64 TLRGRQLCAPPDQPWVERIIQRLQRTSAKMK 94
>gi|4506835 small inducible cytokine A21 precursor [Homo sapiens]
Length = 134
Score = 33.9 bits (76), Expect = 0.029
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 33 CCFSFAEQEIPLRAILCYR--NTSSICSNEGLIFKLKRGKEA--CALDTVGWVQRHRKML 88
CC +++++IP + + YR S CS ++F ++ +A CA WVQ+ + L
Sbjct: 31 CCLKYSQRKIPAKVVRSYRKQEPSLGCSIPAILFLPRKRSQAELCADPKELWVQQLMQHL 90
Query: 89 RHCPSKRK 96
PS +K
Sbjct: 91 DKTPSPQK 98
>gi|169234949 CWF19-like 2, cell cycle control [Homo sapiens]
Length = 894
Score = 28.9 bits (63), Expect = 0.92
Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 10/77 (12%)
Query: 22 DSKSMQVPFSRCCFSFAEQEIP--------LRAILCYRNTSSICSNEGLIFKLKRGKEAC 73
+ +S+ +C + F + P ++ LC N S+ LI L+ + A
Sbjct: 664 EHRSLAAQMEKCLYCFDSSQFPKHLIVAIGVKVYLCLPNVRSLTEGHCLIVPLQHHRAAT 723
Query: 74 ALDTVGW--VQRHRKML 88
LD W +Q RK L
Sbjct: 724 LLDEDIWEEIQMFRKSL 740
>gi|10834978 interleukin 8 precursor [Homo sapiens]
Length = 99
Score = 28.5 bits (62), Expect = 1.2
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 57 CSNEGLIFKLKRGKEACALDTVGWVQR 83
C+N +I KL G+E C WVQR
Sbjct: 61 CANTEIIVKLSDGRELCLDPKENWVQR 87
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.328 0.137 0.445
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,554,154
Number of Sequences: 37866
Number of extensions: 126780
Number of successful extensions: 360
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 327
Number of HSP's gapped (non-prelim): 30
length of query: 96
length of database: 18,247,518
effective HSP length: 67
effective length of query: 29
effective length of database: 15,710,496
effective search space: 455604384
effective search space used: 455604384
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.