Search of human proteins with 4505005

Search of human proteins with 4505005

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4505005 LIM domain only 1 [Homo sapiens]
         (156 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4505005 LIM domain only 1 [Homo sapiens]                           337   2e-93
gi|21361802 LIM domain only 3 [Homo sapiens]                          283   3e-77
gi|47778935 LIM domain only 3 [Homo sapiens]                          283   3e-77
gi|214832219 LIM domain only 2 isoform 2 [Homo sapiens]               170   5e-43
gi|214832121 LIM domain only 2 isoform 2 [Homo sapiens]               170   5e-43
gi|214832074 LIM domain only 2 isoform 1 [Homo sapiens]               170   5e-43
gi|5803072 LIM domain only 4 [Homo sapiens]                           164   4e-41
gi|15375314 LIM homeobox protein 4 [Homo sapiens]                     126   7e-30
gi|33569216 LIM homeobox 9 isoform 1 [Homo sapiens]                   124   4e-29
gi|62241033 LIM homeobox 9 isoform 2 [Homo sapiens]                   124   4e-29
gi|30795196 LIM homeobox protein 2 [Homo sapiens]                     121   2e-28
gi|30023847 LIM homeobox protein 3 isoform a [Homo sapiens]           118   2e-27
gi|7657303 LIM homeobox protein 3 isoform b [Homo sapiens]            118   2e-27
gi|30410785 LIM homeobox protein 1 [Homo sapiens]                     108   2e-24
gi|4505007 LIM homeobox transcription factor 1, beta [Homo sapiens]   107   3e-24
gi|28893581 LIM homeobox transcription factor 1, alpha isoform a...   107   4e-24
gi|21956641 ISL LIM homeobox 2 [Homo sapiens]                         105   1e-23
gi|11641283 LIM homeobox protein 5 [Homo sapiens]                     104   3e-23
gi|134284361 LIM homeobox protein 6 isoform 2 [Homo sapiens]          102   1e-22
gi|134284359 LIM homeobox protein 6 isoform 1 [Homo sapiens]          102   1e-22
gi|115387114 islet-1 [Homo sapiens]                                   101   3e-22
gi|50083287 LIM homeobox 8 [Homo sapiens]                             100   4e-22
gi|51173715 actin-binding LIM protein 1 isoform c [Homo sapiens]       80   7e-16
gi|51173713 actin-binding LIM protein 1 isoform b [Homo sapiens]       80   7e-16
gi|51173711 actin-binding LIM protein 1 isoform a [Homo sapiens]       80   7e-16
gi|194272207 actin binding LIM protein family, member 2 isoform ...    73   1e-13
gi|153792514 actin binding LIM protein family, member 2 isoform ...    73   1e-13
gi|194272204 actin binding LIM protein family, member 2 isoform ...    73   1e-13
gi|194272202 actin binding LIM protein family, member 2 isoform ...    73   1e-13
gi|194272200 actin binding LIM protein family, member 2 isoform ...    73   1e-13

>gi|4505005 LIM domain only 1 [Homo sapiens]
          Length = 156

 Score =  337 bits (864), Expect = 2e-93
 Identities = 156/156 (100%), Positives = 156/156 (100%)

Query: 1   MMVLDKEDGVPMLSVQPKGKQKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGE 60
           MMVLDKEDGVPMLSVQPKGKQKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGE
Sbjct: 1   MMVLDKEDGVPMLSVQPKGKQKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGE 60

Query: 61  VGSTLYTKANLILCRRDYLRLFGTTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCN 120
           VGSTLYTKANLILCRRDYLRLFGTTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCN
Sbjct: 61  VGSTLYTKANLILCRRDYLRLFGTTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCN 120

Query: 121 QRFCVGDKFFLKNNMILCQMDYEEGQLNGTFESQVQ 156
           QRFCVGDKFFLKNNMILCQMDYEEGQLNGTFESQVQ
Sbjct: 121 QRFCVGDKFFLKNNMILCQMDYEEGQLNGTFESQVQ 156


>gi|21361802 LIM domain only 3 [Homo sapiens]
          Length = 145

 Score =  283 bits (725), Expect = 3e-77
 Identities = 130/145 (89%), Positives = 134/145 (92%)

Query: 12  MLSVQPKGKQKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANL 71
           MLSVQP  K KGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANL
Sbjct: 1   MLSVQPDTKPKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANL 60

Query: 72  ILCRRDYLRLFGTTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGDKFFL 131
           ILCRRDYLRLFG TGNCAACSKLIPAFEMVMRA+DNVYHLDCFACQLCNQRFCVGDKFFL
Sbjct: 61  ILCRRDYLRLFGVTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFL 120

Query: 132 KNNMILCQMDYEEGQLNGTFESQVQ 156
           KNNMILCQ DYEEG +   +  QV+
Sbjct: 121 KNNMILCQTDYEEGLMKEGYAPQVR 145


>gi|47778935 LIM domain only 3 [Homo sapiens]
          Length = 145

 Score =  283 bits (725), Expect = 3e-77
 Identities = 130/145 (89%), Positives = 134/145 (92%)

Query: 12  MLSVQPKGKQKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANL 71
           MLSVQP  K KGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANL
Sbjct: 1   MLSVQPDTKPKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANL 60

Query: 72  ILCRRDYLRLFGTTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGDKFFL 131
           ILCRRDYLRLFG TGNCAACSKLIPAFEMVMRA+DNVYHLDCFACQLCNQRFCVGDKFFL
Sbjct: 61  ILCRRDYLRLFGVTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFL 120

Query: 132 KNNMILCQMDYEEGQLNGTFESQVQ 156
           KNNMILCQ DYEEG +   +  QV+
Sbjct: 121 KNNMILCQTDYEEGLMKEGYAPQVR 145


>gi|214832219 LIM domain only 2 isoform 2 [Homo sapiens]
          Length = 158

 Score =  170 bits (430), Expect = 5e-43
 Identities = 75/127 (59%), Positives = 90/127 (70%), Gaps = 1/127 (0%)

Query: 24  CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFG 83
           C GC + I DRY LKA+D+YWHEDCL C  C CRLGEVG  LY K    LCRRDYLRLFG
Sbjct: 30  CGGCQQNIGDRYFLKAIDQYWHEDCLSCDLCGCRLGEVGRRLYYKLGRKLCRRDYLRLFG 89

Query: 84  TTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQMD-Y 142
             G CA+C K I A+EM MR +D VYHL+CF C  C + FCVGD++ L N+ I+C+ D Y
Sbjct: 90  QDGLCASCDKRIRAYEMTMRVKDKVYHLECFKCAACQKHFCVGDRYLLINSDIVCEQDIY 149

Query: 143 EEGQLNG 149
           E  ++NG
Sbjct: 150 EWTKING 156


>gi|214832121 LIM domain only 2 isoform 2 [Homo sapiens]
          Length = 158

 Score =  170 bits (430), Expect = 5e-43
 Identities = 75/127 (59%), Positives = 90/127 (70%), Gaps = 1/127 (0%)

Query: 24  CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFG 83
           C GC + I DRY LKA+D+YWHEDCL C  C CRLGEVG  LY K    LCRRDYLRLFG
Sbjct: 30  CGGCQQNIGDRYFLKAIDQYWHEDCLSCDLCGCRLGEVGRRLYYKLGRKLCRRDYLRLFG 89

Query: 84  TTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQMD-Y 142
             G CA+C K I A+EM MR +D VYHL+CF C  C + FCVGD++ L N+ I+C+ D Y
Sbjct: 90  QDGLCASCDKRIRAYEMTMRVKDKVYHLECFKCAACQKHFCVGDRYLLINSDIVCEQDIY 149

Query: 143 EEGQLNG 149
           E  ++NG
Sbjct: 150 EWTKING 156


>gi|214832074 LIM domain only 2 isoform 1 [Homo sapiens]
          Length = 227

 Score =  170 bits (430), Expect = 5e-43
 Identities = 75/127 (59%), Positives = 90/127 (70%), Gaps = 1/127 (0%)

Query: 24  CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFG 83
           C GC + I DRY LKA+D+YWHEDCL C  C CRLGEVG  LY K    LCRRDYLRLFG
Sbjct: 99  CGGCQQNIGDRYFLKAIDQYWHEDCLSCDLCGCRLGEVGRRLYYKLGRKLCRRDYLRLFG 158

Query: 84  TTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQMD-Y 142
             G CA+C K I A+EM MR +D VYHL+CF C  C + FCVGD++ L N+ I+C+ D Y
Sbjct: 159 QDGLCASCDKRIRAYEMTMRVKDKVYHLECFKCAACQKHFCVGDRYLLINSDIVCEQDIY 218

Query: 143 EEGQLNG 149
           E  ++NG
Sbjct: 219 EWTKING 225


>gi|5803072 LIM domain only 4 [Homo sapiens]
          Length = 165

 Score =  164 bits (414), Expect = 4e-41
 Identities = 69/132 (52%), Positives = 89/132 (67%)

Query: 22  KGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRL 81
           K CAGC  KI DR+LL A+D YWH  CLKC+CC  +LG++G++ YTK+ +ILCR DY+RL
Sbjct: 21  KRCAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYIRL 80

Query: 82  FGTTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQMD 141
           FG +G C+AC + IPA E+VMRA+ NVYHL CF C  C  R   GD+F   N  + C+ D
Sbjct: 81  FGNSGACSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFHYINGSLFCEHD 140

Query: 142 YEEGQLNGTFES 153
                +NG   S
Sbjct: 141 RPTALINGHLNS 152


>gi|15375314 LIM homeobox protein 4 [Homo sapiens]
          Length = 390

 Score =  126 bits (317), Expect = 7e-30
 Identities = 57/146 (39%), Positives = 92/146 (63%), Gaps = 6/146 (4%)

Query: 9   GVPMLSVQPKGKQKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTK 68
           G+P +   P  +   CAGCN+ I D+++LK LD++WH  CLKCA C  +L +     +++
Sbjct: 15  GLPEMLGVPMQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLAD---RCFSR 71

Query: 69  ANLILCRRDYLRLFGTTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGDK 128
           A  + C+ D+ + FGT   C AC + IP  ++V +A+D VYHL CFAC +CN++   GD+
Sbjct: 72  AGSVYCKEDFFKRFGT--KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDE 129

Query: 129 FFL-KNNMILCQMDYEEGQLNGTFES 153
           F+L ++  ++C+ DYE  + N   E+
Sbjct: 130 FYLMEDGRLVCKEDYETAKQNDDSEA 155


>gi|33569216 LIM homeobox 9 isoform 1 [Homo sapiens]
          Length = 397

 Score =  124 bits (310), Expect = 4e-29
 Identities = 67/151 (44%), Positives = 87/151 (57%), Gaps = 8/151 (5%)

Query: 6   KEDGVPMLSVQPKGKQKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLG-EVGST 64
           ++ G+P LS +   K   CAGC  KI DRY L A+DK WH  CLKC  C+C+L  E   T
Sbjct: 56  RDAGMPPLSPE---KPALCAGCGGKISDRYYLLAVDKQWHLRCLKC--CECKLALESELT 110

Query: 65  LYTKANLILCRRDYLRLFGTTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFC 124
            + K   I C+ DY R F     CA C   I A EMVMRARD+VYHL CF C  CN+   
Sbjct: 111 CFAKDGSIYCKEDYYRRFSVQ-RCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLT 169

Query: 125 VGDKFFLKNNMILCQMDYEEGQLNGTFESQV 155
            GD F +K++++ C+  +E   L G +  Q+
Sbjct: 170 TGDHFGMKDSLVYCRAHFET-LLQGEYPPQL 199


>gi|62241033 LIM homeobox 9 isoform 2 [Homo sapiens]
          Length = 388

 Score =  124 bits (310), Expect = 4e-29
 Identities = 67/151 (44%), Positives = 87/151 (57%), Gaps = 8/151 (5%)

Query: 6   KEDGVPMLSVQPKGKQKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLG-EVGST 64
           ++ G+P LS +   K   CAGC  KI DRY L A+DK WH  CLKC  C+C+L  E   T
Sbjct: 47  RDAGMPPLSPE---KPALCAGCGGKISDRYYLLAVDKQWHLRCLKC--CECKLALESELT 101

Query: 65  LYTKANLILCRRDYLRLFGTTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFC 124
            + K   I C+ DY R F     CA C   I A EMVMRARD+VYHL CF C  CN+   
Sbjct: 102 CFAKDGSIYCKEDYYRRFSVQ-RCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLT 160

Query: 125 VGDKFFLKNNMILCQMDYEEGQLNGTFESQV 155
            GD F +K++++ C+  +E   L G +  Q+
Sbjct: 161 TGDHFGMKDSLVYCRAHFET-LLQGEYPPQL 190


>gi|30795196 LIM homeobox protein 2 [Homo sapiens]
          Length = 406

 Score =  121 bits (304), Expect = 2e-28
 Identities = 63/140 (45%), Positives = 82/140 (58%), Gaps = 7/140 (5%)

Query: 5   DKEDGVPMLSVQPKGKQKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLG-EVGS 63
           D E  +P +S     +   CAGC  KI DRY L A+DK WH  CLKC  C+C+L  E   
Sbjct: 37  DTETTMPSIS---SDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKC--CECKLNLESEL 91

Query: 64  TLYTKANLILCRRDYLRLFGTTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRF 123
           T ++K   I C+ DY R F     CA C   I A EMVMRARD VYHL+CF C  CN+  
Sbjct: 92  TCFSKDGSIYCKEDYYRRFSVQ-RCARCHLGISASEMVMRARDLVYHLNCFTCTTCNKML 150

Query: 124 CVGDKFFLKNNMILCQMDYE 143
             GD F +K++++ C++ +E
Sbjct: 151 TTGDHFGMKDSLVYCRLHFE 170


>gi|30023847 LIM homeobox protein 3 isoform a [Homo sapiens]
          Length = 397

 Score =  118 bits (296), Expect = 2e-27
 Identities = 53/121 (43%), Positives = 81/121 (66%), Gaps = 6/121 (4%)

Query: 24  CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFG 83
           CAGC++ I DR++LKALD++WH  CLKC+ C   L E     +++   + C+ D+ + FG
Sbjct: 31  CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAE---RCFSRGESVYCKDDFFKRFG 87

Query: 84  TTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGDKFFL-KNNMILCQMDY 142
           T   CAAC   IP  ++V RA+D VYHL CFAC +C ++   GD+F+L +++ ++C+ DY
Sbjct: 88  T--KCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADY 145

Query: 143 E 143
           E
Sbjct: 146 E 146


>gi|7657303 LIM homeobox protein 3 isoform b [Homo sapiens]
          Length = 402

 Score =  118 bits (296), Expect = 2e-27
 Identities = 53/121 (43%), Positives = 81/121 (66%), Gaps = 6/121 (4%)

Query: 24  CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFG 83
           CAGC++ I DR++LKALD++WH  CLKC+ C   L E     +++   + C+ D+ + FG
Sbjct: 36  CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAE---RCFSRGESVYCKDDFFKRFG 92

Query: 84  TTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGDKFFL-KNNMILCQMDY 142
           T   CAAC   IP  ++V RA+D VYHL CFAC +C ++   GD+F+L +++ ++C+ DY
Sbjct: 93  T--KCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADY 150

Query: 143 E 143
           E
Sbjct: 151 E 151


>gi|30410785 LIM homeobox protein 1 [Homo sapiens]
          Length = 406

 Score =  108 bits (269), Expect = 2e-24
 Identities = 47/120 (39%), Positives = 72/120 (60%), Gaps = 6/120 (5%)

Query: 24  CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFG 83
           CAGC R I DR+LL  LD+ WH  C++C  C C L E     +++   + C+ D+ R FG
Sbjct: 4   CAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTE---KCFSREGKLYCKNDFFRCFG 60

Query: 84  TTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGDK-FFLKNNMILCQMDY 142
           T   CA C++ I   ++V RAR  V+HL+CF C +CN++   G++ + +  N  +C+ DY
Sbjct: 61  T--KCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDY 118



 Score = 35.8 bits (81), Expect = 0.015
 Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 3/58 (5%)

Query: 24  CAGCNRKIKDRYLLK-ALDKYWHEDCLKCACCDCRLGEVGSTLYT-KANLILCRRDYL 79
           CAGC + I    L++ A  K +H +C  C  C+ +L   G  LY    N  +C+ DYL
Sbjct: 63  CAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLS-TGEELYIIDENKFVCKEDYL 119


>gi|4505007 LIM homeobox transcription factor 1, beta [Homo sapiens]
          Length = 372

 Score =  107 bits (268), Expect = 3e-24
 Identities = 49/121 (40%), Positives = 72/121 (59%), Gaps = 5/121 (4%)

Query: 24  CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFG 83
           C GC R I DR+L++  +  WHE+CL+CA C   L    ++ Y +   + C++DY +LF 
Sbjct: 33  CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALT---TSCYFRDRKLYCKQDYQQLFA 89

Query: 84  TTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQMDYE 143
               C+ C + I   E VMRA + VYHL CF C +C ++   GD+F LK   +LC+ DYE
Sbjct: 90  A--KCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDYE 147

Query: 144 E 144
           +
Sbjct: 148 K 148


>gi|28893581 LIM homeobox transcription factor 1, alpha isoform a
           [Homo sapiens]
          Length = 382

 Score =  107 bits (267), Expect = 4e-24
 Identities = 53/131 (40%), Positives = 75/131 (57%), Gaps = 8/131 (6%)

Query: 14  SVQPKGKQKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLIL 73
           +V PK     C GC R I DR+LL+  D +WHE C++CA C   L    +T + +   + 
Sbjct: 28  AVSPKSV---CEGCQRVILDRFLLRLNDSFWHEQCVQCASCKEPLE---TTCFYRDKKLY 81

Query: 74  CRRDYLRLFGTTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGDKFFLKN 133
           C+ DY +LF     C  C + I   E VMRA+ +VYHL CF C +C ++   GD+F LK 
Sbjct: 82  CKYDYEKLFAV--KCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKE 139

Query: 134 NMILCQMDYEE 144
             +LC+ DYE+
Sbjct: 140 GQLLCKGDYEK 150


>gi|21956641 ISL LIM homeobox 2 [Homo sapiens]
          Length = 359

 Score =  105 bits (263), Expect = 1e-23
 Identities = 49/120 (40%), Positives = 74/120 (61%), Gaps = 4/120 (3%)

Query: 24  CAGCNRKIKDRYLLKAL-DKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLF 82
           C GC  +I D+++L+   D  WH  CLKCA C   L E   T + +     C+RDY+RLF
Sbjct: 27  CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDET-CTCFVRDGKTYCKRDYVRLF 85

Query: 83  GTTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQMDY 142
           G    CA C     + ++VMRARD+VYH++CF C +C+++   GD+F L+ + +LC+ D+
Sbjct: 86  GI--KCAKCQVGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLREHELLCRADH 143


>gi|11641283 LIM homeobox protein 5 [Homo sapiens]
          Length = 402

 Score =  104 bits (259), Expect = 3e-23
 Identities = 49/132 (37%), Positives = 76/132 (57%), Gaps = 12/132 (9%)

Query: 24  CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFG 83
           CAGC R I DR+LL  LD+ WH  C++C  C   L E     +++   + C+ D+ R FG
Sbjct: 5   CAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSE---KCFSREGKLYCKNDFFRRFG 61

Query: 84  TTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGDKFF-LKNNMILCQMDY 142
           T   CA C++ I   ++V +AR  V+HL+CF C +CN++   G++ + +  N  +C+ DY
Sbjct: 62  T--KCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDY 119

Query: 143 ------EEGQLN 148
                 +EG LN
Sbjct: 120 LSSSSLKEGSLN 131


>gi|134284361 LIM homeobox protein 6 isoform 2 [Homo sapiens]
          Length = 377

 Score =  102 bits (254), Expect = 1e-22
 Identities = 51/127 (40%), Positives = 69/127 (54%), Gaps = 3/127 (2%)

Query: 17  PKGKQKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRR 76
           P   +  C+ C  +I DRYLLK  +  WH  CL+C+ C   L +  S  Y K   I C+ 
Sbjct: 92  PSAGKNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSC-YIKNKEIFCKM 150

Query: 77  DYLRLFGTTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGDKFFLKNNMI 136
           DY   FGT   CA C + I A + V RAR N YHL CFAC  C ++   G++F L    +
Sbjct: 151 DYFSRFGT--KCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKV 208

Query: 137 LCQMDYE 143
           LC++ Y+
Sbjct: 209 LCRIHYD 215


>gi|134284359 LIM homeobox protein 6 isoform 1 [Homo sapiens]
          Length = 392

 Score =  102 bits (254), Expect = 1e-22
 Identities = 51/127 (40%), Positives = 69/127 (54%), Gaps = 3/127 (2%)

Query: 17  PKGKQKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRR 76
           P   +  C+ C  +I DRYLLK  +  WH  CL+C+ C   L +  S  Y K   I C+ 
Sbjct: 92  PSAGKNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSC-YIKNKEIFCKM 150

Query: 77  DYLRLFGTTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGDKFFLKNNMI 136
           DY   FGT   CA C + I A + V RAR N YHL CFAC  C ++   G++F L    +
Sbjct: 151 DYFSRFGT--KCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKV 208

Query: 137 LCQMDYE 143
           LC++ Y+
Sbjct: 209 LCRIHYD 215


>gi|115387114 islet-1 [Homo sapiens]
          Length = 349

 Score =  101 bits (251), Expect = 3e-22
 Identities = 48/121 (39%), Positives = 71/121 (58%), Gaps = 4/121 (3%)

Query: 24  CAGCNRKIKDRYLLKAL-DKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLF 82
           C GC  +I D+Y+L+   D  WH  CLKCA C+  L E   T + +     C+RDY+RL+
Sbjct: 17  CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDE-SCTCFVRDGKTYCKRDYIRLY 75

Query: 83  GTTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQMDY 142
           G    CA CS      + VMRAR  VYH++CF C  C+++   GD+F L+ + + C+ D+
Sbjct: 76  GI--KCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRADH 133

Query: 143 E 143
           +
Sbjct: 134 D 134


>gi|50083287 LIM homeobox 8 [Homo sapiens]
          Length = 356

 Score =  100 bits (250), Expect = 4e-22
 Identities = 48/120 (40%), Positives = 68/120 (56%), Gaps = 3/120 (2%)

Query: 24  CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFG 83
           C  C  +I D+YLLK  D  WH  CL C+ C   LG   ++ Y K   I C+ DY R +G
Sbjct: 75  CNSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGR-HTSCYIKDKDIFCKLDYFRRYG 133

Query: 84  TTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQMDYE 143
           T   C+ C + I + + V RA+ NVYHL CFAC  C ++   G++F L    +LC++ Y+
Sbjct: 134 T--RCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRVHYD 191


>gi|51173715 actin-binding LIM protein 1 isoform c [Homo sapiens]
          Length = 746

 Score = 80.1 bits (196), Expect = 7e-16
 Identities = 45/114 (39%), Positives = 58/114 (50%), Gaps = 9/114 (7%)

Query: 24  CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLY-TKANLILCRRDYLRLF 82
           CAGC R IK+   L ALDK WH  C KC  C    G+V +  Y +K     C +DY  LF
Sbjct: 166 CAGCGRDIKNGQALLALDKQWHLGCFKCKSC----GKVLTGEYISKDGAPYCEKDYQGLF 221

Query: 83  GTTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGDKFFLKNNMI 136
           G    C AC + I     V+ A D  YH  C  C  CNQ F  G++ +L+ + +
Sbjct: 222 GV--KCEACHQFITG--KVLEAGDKHYHPSCARCSRCNQMFTEGEEMYLQGSTV 271



 Score = 67.4 bits (163), Expect = 5e-12
 Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 7/117 (5%)

Query: 24  CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFG 83
           C  C    K   +L+   K++H  C  C  C C L + G   + K    LC  DY R++G
Sbjct: 39  CHKCGEPCKGE-VLRVQTKHFHIKCFTCKVCGCDLAQGG--FFIKNGEYLCTLDYQRMYG 95

Query: 84  TTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQM 140
           T   C  C + +     V+ A    YH +CFAC +C + F  GD+        LCQ+
Sbjct: 96  T--RCHGCGEFVEG--EVVTALGKTYHPNCFACTICKRPFPPGDRVTFNGRDCLCQL 148



 Score = 41.6 bits (96), Expect = 3e-04
 Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 3/57 (5%)

Query: 87  NCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQMDYE 143
           +C  C +  P    V+R +   +H+ CF C++C      G  FF+KN   LC +DY+
Sbjct: 38  HCHKCGE--PCKGEVLRVQTKHFHIKCFTCKVCGCDLAQGG-FFIKNGEYLCTLDYQ 91


>gi|51173713 actin-binding LIM protein 1 isoform b [Homo sapiens]
          Length = 718

 Score = 80.1 bits (196), Expect = 7e-16
 Identities = 45/114 (39%), Positives = 58/114 (50%), Gaps = 9/114 (7%)

Query: 24  CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLY-TKANLILCRRDYLRLF 82
           CAGC R IK+   L ALDK WH  C KC  C    G+V +  Y +K     C +DY  LF
Sbjct: 166 CAGCGRDIKNGQALLALDKQWHLGCFKCKSC----GKVLTGEYISKDGAPYCEKDYQGLF 221

Query: 83  GTTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGDKFFLKNNMI 136
           G    C AC + I     V+ A D  YH  C  C  CNQ F  G++ +L+ + +
Sbjct: 222 GV--KCEACHQFITG--KVLEAGDKHYHPSCARCSRCNQMFTEGEEMYLQGSTV 271



 Score = 67.4 bits (163), Expect = 5e-12
 Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 7/117 (5%)

Query: 24  CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFG 83
           C  C    K   +L+   K++H  C  C  C C L + G   + K    LC  DY R++G
Sbjct: 39  CHKCGEPCKGE-VLRVQTKHFHIKCFTCKVCGCDLAQGG--FFIKNGEYLCTLDYQRMYG 95

Query: 84  TTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQM 140
           T   C  C + +     V+ A    YH +CFAC +C + F  GD+        LCQ+
Sbjct: 96  T--RCHGCGEFVEG--EVVTALGKTYHPNCFACTICKRPFPPGDRVTFNGRDCLCQL 148



 Score = 41.6 bits (96), Expect = 3e-04
 Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 3/57 (5%)

Query: 87  NCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQMDYE 143
           +C  C +  P    V+R +   +H+ CF C++C      G  FF+KN   LC +DY+
Sbjct: 38  HCHKCGE--PCKGEVLRVQTKHFHIKCFTCKVCGCDLAQGG-FFIKNGEYLCTLDYQ 91


>gi|51173711 actin-binding LIM protein 1 isoform a [Homo sapiens]
          Length = 778

 Score = 80.1 bits (196), Expect = 7e-16
 Identities = 45/114 (39%), Positives = 58/114 (50%), Gaps = 9/114 (7%)

Query: 24  CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLY-TKANLILCRRDYLRLF 82
           CAGC R IK+   L ALDK WH  C KC  C    G+V +  Y +K     C +DY  LF
Sbjct: 226 CAGCGRDIKNGQALLALDKQWHLGCFKCKSC----GKVLTGEYISKDGAPYCEKDYQGLF 281

Query: 83  GTTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGDKFFLKNNMI 136
           G    C AC + I     V+ A D  YH  C  C  CNQ F  G++ +L+ + +
Sbjct: 282 GV--KCEACHQFITG--KVLEAGDKHYHPSCARCSRCNQMFTEGEEMYLQGSTV 331



 Score = 67.4 bits (163), Expect = 5e-12
 Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 7/117 (5%)

Query: 24  CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFG 83
           C  C    K   +L+   K++H  C  C  C C L + G   + K    LC  DY R++G
Sbjct: 99  CHKCGEPCKGE-VLRVQTKHFHIKCFTCKVCGCDLAQGG--FFIKNGEYLCTLDYQRMYG 155

Query: 84  TTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQM 140
           T   C  C + +     V+ A    YH +CFAC +C + F  GD+        LCQ+
Sbjct: 156 T--RCHGCGEFVEG--EVVTALGKTYHPNCFACTICKRPFPPGDRVTFNGRDCLCQL 208



 Score = 41.6 bits (96), Expect = 3e-04
 Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 3/57 (5%)

Query: 87  NCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQMDYE 143
           +C  C +  P    V+R +   +H+ CF C++C      G  FF+KN   LC +DY+
Sbjct: 98  HCHKCGE--PCKGEVLRVQTKHFHIKCFTCKVCGCDLAQGG-FFIKNGEYLCTLDYQ 151


>gi|194272207 actin binding LIM protein family, member 2 isoform 7
           [Homo sapiens]
          Length = 470

 Score = 72.8 bits (177), Expect = 1e-13
 Identities = 40/115 (34%), Positives = 54/115 (46%), Gaps = 7/115 (6%)

Query: 22  KGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRL 81
           + C GC  +IK+   L ALDK+WH  C KC  C   L    +   +K  L  C  DY   
Sbjct: 151 RSCGGCGTEIKNGQALVALDKHWHLGCFKCKSCGKLL---NAEYISKDGLPYCEADYHAK 207

Query: 82  FGTTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGDKFFLKNNMI 136
           FG    C +C K I     V+ A +  YH  C  C  C Q F  G++ +L+ + I
Sbjct: 208 FGI--RCDSCEKYITG--RVLEAGEKHYHPSCALCVRCGQMFAEGEEMYLQGSSI 258



 Score = 70.9 bits (172), Expect = 4e-13
 Identities = 39/116 (33%), Positives = 52/116 (44%), Gaps = 7/116 (6%)

Query: 24  CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFG 83
           C  C    K   +L+  DKY+H  C  C  C C L E G   + +    +C  DY RL+G
Sbjct: 24  CNTCGNVCKGE-VLRVQDKYFHIKCFVCKACGCDLAEGG--FFVRQGEYICTLDYQRLYG 80

Query: 84  TTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQ 139
           T   C +C + I     V+ A    YH DCF C +C   F  GD+        +CQ
Sbjct: 81  T--RCFSCDQFIEG--EVVSALGKTYHPDCFVCAVCRLPFPPGDRVTFNGKECMCQ 132


>gi|153792514 actin binding LIM protein family, member 2 isoform 6
           [Homo sapiens]
          Length = 521

 Score = 72.8 bits (177), Expect = 1e-13
 Identities = 40/115 (34%), Positives = 54/115 (46%), Gaps = 7/115 (6%)

Query: 22  KGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRL 81
           + C GC  +IK+   L ALDK+WH  C KC  C   L    +   +K  L  C  DY   
Sbjct: 151 RSCGGCGTEIKNGQALVALDKHWHLGCFKCKSCGKLL---NAEYISKDGLPYCEADYHAK 207

Query: 82  FGTTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGDKFFLKNNMI 136
           FG    C +C K I     V+ A +  YH  C  C  C Q F  G++ +L+ + I
Sbjct: 208 FGI--RCDSCEKYITG--RVLEAGEKHYHPSCALCVRCGQMFAEGEEMYLQGSSI 258



 Score = 70.9 bits (172), Expect = 4e-13
 Identities = 39/116 (33%), Positives = 52/116 (44%), Gaps = 7/116 (6%)

Query: 24  CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFG 83
           C  C    K   +L+  DKY+H  C  C  C C L E G   + +    +C  DY RL+G
Sbjct: 24  CNTCGNVCKGE-VLRVQDKYFHIKCFVCKACGCDLAEGG--FFVRQGEYICTLDYQRLYG 80

Query: 84  TTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQ 139
           T   C +C + I     V+ A    YH DCF C +C   F  GD+        +CQ
Sbjct: 81  T--RCFSCDQFIEG--EVVSALGKTYHPDCFVCAVCRLPFPPGDRVTFNGKECMCQ 132


>gi|194272204 actin binding LIM protein family, member 2 isoform 5
           [Homo sapiens]
          Length = 531

 Score = 72.8 bits (177), Expect = 1e-13
 Identities = 40/115 (34%), Positives = 54/115 (46%), Gaps = 7/115 (6%)

Query: 22  KGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRL 81
           + C GC  +IK+   L ALDK+WH  C KC  C   L    +   +K  L  C  DY   
Sbjct: 151 RSCGGCGTEIKNGQALVALDKHWHLGCFKCKSCGKLL---NAEYISKDGLPYCEADYHAK 207

Query: 82  FGTTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGDKFFLKNNMI 136
           FG    C +C K I     V+ A +  YH  C  C  C Q F  G++ +L+ + I
Sbjct: 208 FGI--RCDSCEKYITG--RVLEAGEKHYHPSCALCVRCGQMFAEGEEMYLQGSSI 258



 Score = 70.9 bits (172), Expect = 4e-13
 Identities = 39/116 (33%), Positives = 52/116 (44%), Gaps = 7/116 (6%)

Query: 24  CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFG 83
           C  C    K   +L+  DKY+H  C  C  C C L E G   + +    +C  DY RL+G
Sbjct: 24  CNTCGNVCKGE-VLRVQDKYFHIKCFVCKACGCDLAEGG--FFVRQGEYICTLDYQRLYG 80

Query: 84  TTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQ 139
           T   C +C + I     V+ A    YH DCF C +C   F  GD+        +CQ
Sbjct: 81  T--RCFSCDQFIEG--EVVSALGKTYHPDCFVCAVCRLPFPPGDRVTFNGKECMCQ 132


>gi|194272202 actin binding LIM protein family, member 2 isoform 4
           [Homo sapiens]
          Length = 559

 Score = 72.8 bits (177), Expect = 1e-13
 Identities = 40/115 (34%), Positives = 54/115 (46%), Gaps = 7/115 (6%)

Query: 22  KGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRL 81
           + C GC  +IK+   L ALDK+WH  C KC  C   L    +   +K  L  C  DY   
Sbjct: 151 RSCGGCGTEIKNGQALVALDKHWHLGCFKCKSCGKLL---NAEYISKDGLPYCEADYHAK 207

Query: 82  FGTTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGDKFFLKNNMI 136
           FG    C +C K I     V+ A +  YH  C  C  C Q F  G++ +L+ + I
Sbjct: 208 FGI--RCDSCEKYITG--RVLEAGEKHYHPSCALCVRCGQMFAEGEEMYLQGSSI 258



 Score = 70.9 bits (172), Expect = 4e-13
 Identities = 39/116 (33%), Positives = 52/116 (44%), Gaps = 7/116 (6%)

Query: 24  CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFG 83
           C  C    K   +L+  DKY+H  C  C  C C L E G   + +    +C  DY RL+G
Sbjct: 24  CNTCGNVCKGE-VLRVQDKYFHIKCFVCKACGCDLAEGG--FFVRQGEYICTLDYQRLYG 80

Query: 84  TTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQ 139
           T   C +C + I     V+ A    YH DCF C +C   F  GD+        +CQ
Sbjct: 81  T--RCFSCDQFIEG--EVVSALGKTYHPDCFVCAVCRLPFPPGDRVTFNGKECMCQ 132


>gi|194272200 actin binding LIM protein family, member 2 isoform 3
           [Homo sapiens]
          Length = 572

 Score = 72.8 bits (177), Expect = 1e-13
 Identities = 40/115 (34%), Positives = 54/115 (46%), Gaps = 7/115 (6%)

Query: 22  KGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRL 81
           + C GC  +IK+   L ALDK+WH  C KC  C   L    +   +K  L  C  DY   
Sbjct: 151 RSCGGCGTEIKNGQALVALDKHWHLGCFKCKSCGKLL---NAEYISKDGLPYCEADYHAK 207

Query: 82  FGTTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGDKFFLKNNMI 136
           FG    C +C K I     V+ A +  YH  C  C  C Q F  G++ +L+ + I
Sbjct: 208 FGI--RCDSCEKYITG--RVLEAGEKHYHPSCALCVRCGQMFAEGEEMYLQGSSI 258



 Score = 70.9 bits (172), Expect = 4e-13
 Identities = 39/116 (33%), Positives = 52/116 (44%), Gaps = 7/116 (6%)

Query: 24  CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFG 83
           C  C    K   +L+  DKY+H  C  C  C C L E G   + +    +C  DY RL+G
Sbjct: 24  CNTCGNVCKGE-VLRVQDKYFHIKCFVCKACGCDLAEGG--FFVRQGEYICTLDYQRLYG 80

Query: 84  TTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQ 139
           T   C +C + I     V+ A    YH DCF C +C   F  GD+        +CQ
Sbjct: 81  T--RCFSCDQFIEG--EVVSALGKTYHPDCFVCAVCRLPFPPGDRVTFNGKECMCQ 132


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.328    0.141    0.468 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,123,825
Number of Sequences: 37866
Number of extensions: 271469
Number of successful extensions: 1304
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 101
Number of HSP's successfully gapped in prelim test: 41
Number of HSP's that attempted gapping in prelim test: 825
Number of HSP's gapped (non-prelim): 270
length of query: 156
length of database: 18,247,518
effective HSP length: 94
effective length of query: 62
effective length of database: 14,688,114
effective search space: 910663068
effective search space used: 910663068
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.