IRF1 28905

Name: IRF1	Sequence: fasta or formatted (325aa)		NCBI GI: 4504721
Description: interferon regulatory factor 1		Referenced in: Interferon
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.2 17 2 C cysteine 1.8 6 1 D aspartate 7.7 25 2 E glutamate 6.8 22 2 F phenylalanine 2.2 7 1 G glycine 4.9 16 2 H histidine 1.5 5 1 I isoleucine 4.9 16 1 K lysine 7.1 23 1 L leucine 7.7 25 2 M methionine 3.4 11 1 N asparagine 3.7 12 1 P proline 8.9 29 2 Q glutamine 4.0 13 1 R arginine 4.6 15 1 S serine 10.5 34 3 T threonine 5.5 18 2 V valine 4.6 15 2 W tryptophan 2.8 9 1 Y tyrosine 2.2 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 interferon regulatory factor 1 IRF2 0.306 interferon regulatory factor 2 IRF8 0.143 interferon regulatory factor 8 IRF4 0.138 interferon regulatory factor 4 IRF5 0.129 interferon regulatory factor 5 isoform c IRF5 0.129 interferon regulatory factor 5 isoform b IRF5 0.129 interferon regulatory factor 5 isoform d IRF5 0.129 interferon regulatory factor 5 isoform c IRF5 0.129 interferon regulatory factor 5 isoform c IRF5 0.129 interferon regulatory factor 5 isoform b IRF5 0.129 interferon regulatory factor 5 isoform a IRF6 0.124 interferon regulatory factor 6 IRF9 0.115 interferon-stimulated transcription factor 3, gamma ... IRF3 0.086 interferon regulatory factor 3 IRF7 0.060 interferon regulatory factor 7 isoform d IRF7 0.060 interferon regulatory factor 7 isoform a IRF7 0.060 interferon regulatory factor 7 isoform b LOC100293297 0.029 PREDICTED: similar to hCG1785205 LOC100288352 0.029 PREDICTED: similar to hCG1785205 LOC100288352 0.029 PREDICTED: hypothetical protein XP_002343764 FAM133A 0.025 hypothetical protein LOC286499 C19orf55 0.018 hypothetical protein LOC148137 COL5A1 0.017 alpha 1 type V collagen preproprotein PRDM2 0.015 retinoblastoma protein-binding zinc finger protein i... PRDM2 0.015 retinoblastoma protein-binding zinc finger protein i... TOP1 0.012 DNA topoisomerase I DST 0.012 dystonin isoform 2 ESCO1 0.012 establishment of cohesion 1 homolog 1 C9orf79 0.012 chromosome 9 open reading frame 79 ZC3H4 0.012 zinc finger CCCH-type containing 4 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.