IRF8 28869

Name: IRF8	Sequence: fasta or formatted (426aa)		NCBI GI: 4504567
Description: interferon regulatory factor 8		Referenced in: Interferon
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.4 23 1 C cysteine 3.3 14 1 D aspartate 4.7 20 2 E glutamate 8.5 36 3 F phenylalanine 4.9 21 2 G glycine 7.5 32 2 H histidine 1.4 6 2 I isoleucine 3.8 16 1 K lysine 5.4 23 1 L leucine 7.5 32 2 M methionine 2.3 10 1 N asparagine 2.1 9 1 P proline 6.8 29 3 Q glutamine 6.8 29 2 R arginine 7.3 31 2 S serine 6.8 29 2 T threonine 3.8 16 3 V valine 7.3 31 2 W tryptophan 1.6 7 2 Y tyrosine 2.8 12 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 interferon regulatory factor 8 IRF4 0.323 interferon regulatory factor 4 IRF9 0.223 interferon-stimulated transcription factor 3, gamma ... IRF6 0.211 interferon regulatory factor 6 IRF5 0.204 interferon regulatory factor 5 isoform c IRF5 0.204 interferon regulatory factor 5 isoform c IRF5 0.204 interferon regulatory factor 5 isoform c IRF5 0.201 interferon regulatory factor 5 isoform d IRF5 0.200 interferon regulatory factor 5 isoform a IRF5 0.200 interferon regulatory factor 5 isoform b IRF5 0.200 interferon regulatory factor 5 isoform b IRF3 0.121 interferon regulatory factor 3 IRF1 0.109 interferon regulatory factor 1 IRF2 0.107 interferon regulatory factor 2 IRF7 0.075 interferon regulatory factor 7 isoform d IRF7 0.075 interferon regulatory factor 7 isoform a IRF7 0.075 interferon regulatory factor 7 isoform b LOC100293297 0.037 PREDICTED: similar to hCG1785205 LOC100288352 0.037 PREDICTED: similar to hCG1785205 LOC100288352 0.037 PREDICTED: hypothetical protein XP_002343764 ANK3 0.008 ankyrin 3 isoform 1 ESYT1 0.007 extended synaptotagmin-like protein 1 PCDHA5 0.007 protocadherin alpha 5 isoform 1 precursor PCDHA5 0.007 protocadherin alpha 5 isoform 2 precursor NLRX1 0.006 NLR family member X1 isoform 1 NLRX1 0.006 NLR family member X1 isoform 2 FBRS 0.006 fibrosin ITIH5 0.006 inter-alpha trypsin inhibitor heavy chain precursor ... ITIH5 0.006 inter-alpha trypsin inhibitor heavy chain precursor... SEZ6L2 0.005 seizure related 6 homolog (mouse)-like 2 isoform 4 ... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.