IRF5 4742

Name: IRF5	Sequence: fasta or formatted (488aa)		NCBI GI: 148833488
Description: interferon regulatory factor 5 isoform c		Referenced in: Interferon
Other entries for this name: alt prot [498aa] interferon regulatory factor 5 isoform b alt mRNA [488aa] interferon regulatory factor 5 isoform c alt prot [514aa] interferon regulatory factor 5 isoform d alt prot [498aa] interferon regulatory factor 5 isoform b alt mRNA [488aa] interferon regulatory factor 5 isoform c alt prot [504aa] interferon regulatory factor 5 isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.7 28 2 C cysteine 2.0 10 1 D aspartate 4.7 23 1 E glutamate 7.4 36 8 F phenylalanine 4.1 20 2 G glycine 6.1 30 1 H histidine 1.8 9 2 I isoleucine 3.9 19 1 K lysine 4.5 22 2 L leucine 11.3 55 3 M methionine 1.6 8 1 N asparagine 2.9 14 1 P proline 13.1 64 3 Q glutamine 7.2 35 2 R arginine 5.3 26 2 S serine 5.7 28 1 T threonine 3.5 17 1 V valine 4.7 23 2 W tryptophan 2.3 11 1 Y tyrosine 2.0 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 interferon regulatory factor 5 isoform c IRF5 1.000 interferon regulatory factor 5 isoform c IRF5 1.000 interferon regulatory factor 5 isoform c IRF5 0.992 interferon regulatory factor 5 isoform b IRF5 0.992 interferon regulatory factor 5 isoform b IRF5 0.989 interferon regulatory factor 5 isoform a IRF5 0.981 interferon regulatory factor 5 isoform d IRF6 0.428 interferon regulatory factor 6 IRF4 0.184 interferon regulatory factor 4 IRF8 0.175 interferon regulatory factor 8 IRF3 0.150 interferon regulatory factor 3 IRF7 0.138 interferon regulatory factor 7 isoform d IRF7 0.138 interferon regulatory factor 7 isoform a IRF7 0.133 interferon regulatory factor 7 isoform b IRF9 0.122 interferon-stimulated transcription factor 3, gamma ... IRF2 0.087 interferon regulatory factor 2 IRF1 0.084 interferon regulatory factor 1 MLL4 0.032 myeloid/lymphoid or mixed-lineage leukemia 4 MLL2 0.027 myeloid/lymphoid or mixed-lineage leukemia 2 KDM6B 0.026 lysine (K)-specific demethylase 6B LOC100288352 0.021 PREDICTED: hypothetical protein XP_002343764 MNT 0.020 MAX binding protein LOC100293297 0.020 PREDICTED: similar to hCG1785205 LOC100288352 0.020 PREDICTED: similar to hCG1785205 VASP 0.019 vasodilator-stimulated phosphoprotein WBP11 0.019 WW domain binding protein 11 UBN2 0.019 ubinuclein 2 LOC100134663 0.018 PREDICTED: hypothetical protein, partial FLJ22184 0.017 PREDICTED: hypothetical protein FLJ22184 GGN 0.017 gametogenetin Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.