STBD1 28713

Name: STBD1	Sequence: fasta or formatted (358aa)		NCBI GI: 4503977
Description: starch binding domain 1		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.7 24 2 C cysteine 1.1 4 1 D aspartate 4.7 17 1 E glutamate 8.1 29 2 F phenylalanine 2.8 10 1 G glycine 11.2 40 3 H histidine 3.9 14 1 I isoleucine 2.0 7 1 K lysine 4.5 16 1 L leucine 8.1 29 2 M methionine 2.0 7 1 N asparagine 4.2 15 1 P proline 4.7 17 1 Q glutamine 4.7 17 2 R arginine 4.5 16 1 S serine 10.1 36 2 T threonine 4.2 15 1 V valine 8.1 29 2 W tryptophan 3.4 12 2 Y tyrosine 1.1 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 starch binding domain 1 JMJD1C 0.017 jumonji domain containing 1C isoform a JMJD1C 0.017 jumonji domain containing 1C isoform b FLJ37078 0.015 hypothetical protein LOC222183 MED1 0.013 mediator complex subunit 1 RXRG 0.011 retinoid X receptor, gamma isoform a COL23A1 0.011 collagen, type XXIII, alpha 1 UNCX 0.011 UNC homeobox COL2A1 0.011 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.011 collagen, type II, alpha 1 isoform 2 precursor [Hom... LOC100294395 0.011 PREDICTED: similar to serum response factor-related... ONECUT3 0.010 one cut homeobox 3 NKX1-2 0.010 NK1 homeobox 2 LOC100293604 0.010 PREDICTED: hypothetical protein NKX1-2 0.010 PREDICTED: NK1 homeobox 2 NKX1-2 0.010 PREDICTED: NK1 homeobox 2 LOC100287837 0.010 PREDICTED: hypothetical protein XP_002343157 NKX1-2 0.010 PREDICTED: NK1 homeobox 2 COL7A1 0.010 alpha 1 type VII collagen precursor CREB3L3 0.010 cAMP responsive element binding protein 3-like 3 [Ho... C10orf12 0.010 hypothetical protein LOC26148 COL6A2 0.008 alpha 2 type VI collagen isoform 2C2a' precursor [H... COL6A2 0.008 alpha 2 type VI collagen isoform 2C2a precursor [Ho... COL6A2 0.008 alpha 2 type VI collagen isoform 2C2 precursor [Hom... TBC1D5 0.008 TBC1 domain family, member 5 isoform b TBC1D5 0.008 TBC1 domain family, member 5 isoform b IQSEC1 0.008 IQ motif and Sec7 domain 1 isoform b NFE2L3 0.008 nuclear factor erythroid 2-like 3 COL28A1 0.008 collagen, type XXVIII precursor COL25A1 0.008 collagen, type XXV, alpha 1 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.