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Search of human proteins with 4503925
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4503925 GATA binding protein 1 [Homo sapiens]
(413 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4503925 GATA binding protein 1 [Homo sapiens] 857 0.0
gi|224611699 GATA binding protein 2 isoform 1 [Homo sapiens] 242 5e-64
gi|20070352 GATA binding protein 2 isoform 1 [Homo sapiens] 242 5e-64
gi|50541959 GATA binding protein 3 isoform 1 [Homo sapiens] 234 8e-62
gi|4503929 GATA binding protein 3 isoform 2 [Homo sapiens] 232 4e-61
gi|224611701 GATA binding protein 2 isoform 2 [Homo sapiens] 214 1e-55
gi|17998698 GATA binding protein 5 [Homo sapiens] 207 1e-53
gi|33188461 GATA binding protein 4 [Homo sapiens] 202 5e-52
gi|40288197 GATA binding protein 6 [Homo sapiens] 192 6e-49
gi|90652851 zinc finger transcription factor TRPS1 [Homo sapiens] 70 3e-12
gi|157266269 GATA like protein-1 [Homo sapiens] 49 6e-06
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 40 0.005
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 40 0.005
gi|88759346 GATA zinc finger domain containing 1 [Homo sapiens] 39 0.009
gi|112421108 capicua homolog [Homo sapiens] 39 0.011
gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens] 38 0.015
gi|24497536 homeobox C13 [Homo sapiens] 38 0.015
gi|44955926 genetic suppressor element 1 isoform 1 [Homo sapiens] 38 0.015
gi|6912752 zinc finger protein 281 [Homo sapiens] 38 0.015
gi|31543543 retinoic acid induced 17 [Homo sapiens] 37 0.033
gi|239743232 PREDICTED: hypothetical protein XP_002342775 [Homo ... 35 0.12
gi|150378545 POM121 membrane glycoprotein (rat)-like [Homo sapiens] 35 0.12
gi|239754668 PREDICTED: mucin 12 [Homo sapiens] 35 0.16
gi|49574532 glycogen synthase kinase 3 alpha [Homo sapiens] 35 0.16
gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens] 34 0.21
gi|7706435 headcase [Homo sapiens] 34 0.21
gi|51479192 ring finger protein 1 [Homo sapiens] 34 0.21
gi|89026265 PREDICTED: mucin 12 [Homo sapiens] 34 0.28
gi|239743293 PREDICTED: mucin 12 [Homo sapiens] 34 0.28
gi|31542493 D site of albumin promoter (albumin D-box) binding p... 33 0.36
>gi|4503925 GATA binding protein 1 [Homo sapiens]
Length = 413
Score = 857 bits (2215), Expect = 0.0
Identities = 413/413 (100%), Positives = 413/413 (100%)
Query: 1 MEFPGLGSLGTSEPLPQFVDPALVSSTPESGVFFPSGPEGLDAAASSTAPSTATAAAAAL 60
MEFPGLGSLGTSEPLPQFVDPALVSSTPESGVFFPSGPEGLDAAASSTAPSTATAAAAAL
Sbjct: 1 MEFPGLGSLGTSEPLPQFVDPALVSSTPESGVFFPSGPEGLDAAASSTAPSTATAAAAAL 60
Query: 61 AYYRDAEAYRHSPVFQVYPLLNCMEGIPGGSPYAGWAYGKTGLYPASTVCPTREDSPPQA 120
AYYRDAEAYRHSPVFQVYPLLNCMEGIPGGSPYAGWAYGKTGLYPASTVCPTREDSPPQA
Sbjct: 61 AYYRDAEAYRHSPVFQVYPLLNCMEGIPGGSPYAGWAYGKTGLYPASTVCPTREDSPPQA 120
Query: 121 VEDLDGKGSTSFLETLKTERLSPDLLTLGPALPSSLPVPNSAYGGPDFSSTFFSPTGSPL 180
VEDLDGKGSTSFLETLKTERLSPDLLTLGPALPSSLPVPNSAYGGPDFSSTFFSPTGSPL
Sbjct: 121 VEDLDGKGSTSFLETLKTERLSPDLLTLGPALPSSLPVPNSAYGGPDFSSTFFSPTGSPL 180
Query: 181 NSAAYSSPKLRGTLPLPPCEARECVNCGATATPLWRRDRTGHYLCNACGLYHKMNGQNRP 240
NSAAYSSPKLRGTLPLPPCEARECVNCGATATPLWRRDRTGHYLCNACGLYHKMNGQNRP
Sbjct: 181 NSAAYSSPKLRGTLPLPPCEARECVNCGATATPLWRRDRTGHYLCNACGLYHKMNGQNRP 240
Query: 241 LIRPKKRLIVSKRAGTQCTNCQTTTTTLWRRNASGDPVCNACGLYYKLHQVNRPLTMRKD 300
LIRPKKRLIVSKRAGTQCTNCQTTTTTLWRRNASGDPVCNACGLYYKLHQVNRPLTMRKD
Sbjct: 241 LIRPKKRLIVSKRAGTQCTNCQTTTTTLWRRNASGDPVCNACGLYYKLHQVNRPLTMRKD 300
Query: 301 GIQTRNRKASGKGKKKRGSSLGGTGAAEGPAGGFMVVAGGSGSGNCGEVASGLTLGPPGT 360
GIQTRNRKASGKGKKKRGSSLGGTGAAEGPAGGFMVVAGGSGSGNCGEVASGLTLGPPGT
Sbjct: 301 GIQTRNRKASGKGKKKRGSSLGGTGAAEGPAGGFMVVAGGSGSGNCGEVASGLTLGPPGT 360
Query: 361 AHLYQGLGPVVLSGPVSHLMPFPGPLLGSPTGSFPTGPMPPTTSTTVVAPLSS 413
AHLYQGLGPVVLSGPVSHLMPFPGPLLGSPTGSFPTGPMPPTTSTTVVAPLSS
Sbjct: 361 AHLYQGLGPVVLSGPVSHLMPFPGPLLGSPTGSFPTGPMPPTTSTTVVAPLSS 413
>gi|224611699 GATA binding protein 2 isoform 1 [Homo sapiens]
Length = 480
Score = 242 bits (617), Expect = 5e-64
Identities = 127/205 (61%), Positives = 143/205 (69%), Gaps = 11/205 (5%)
Query: 122 EDLDG-KGSTSFLETLKTER---LSPDLLTLGPALPSSLPVPNSAYGGP----DFSSTFF 173
ED DG K S E++K E L P L T+G + P+P P D+SS F
Sbjct: 206 EDKDGVKYQVSLTESMKMESGSPLRPGLATMGTQPATHHPIPTYPSYVPAAAHDYSSGLF 265
Query: 174 SPTGSPLNSAAYSSPKLRGTLPLPPC-EARECVNCGATATPLWRRDRTGHYLCNACGLYH 232
P G A+ +PK R C E RECVNCGATATPLWRRD TGHYLCNACGLYH
Sbjct: 266 HPGGFLGGPASSFTPKQRSKAR--SCSEGRECVNCGATATPLWRRDGTGHYLCNACGLYH 323
Query: 233 KMNGQNRPLIRPKKRLIVSKRAGTQCTNCQTTTTTLWRRNASGDPVCNACGLYYKLHQVN 292
KMNGQNRPLI+PK+RL ++RAGT C NCQTTTTTLWRRNA+GDPVCNACGLYYKLH VN
Sbjct: 324 KMNGQNRPLIKPKRRLSAARRAGTCCANCQTTTTTLWRRNANGDPVCNACGLYYKLHNVN 383
Query: 293 RPLTMRKDGIQTRNRKASGKGKKKR 317
RPLTM+K+GIQTRNRK S K KK +
Sbjct: 384 RPLTMKKEGIQTRNRKMSNKSKKSK 408
Score = 29.6 bits (65), Expect = 5.2
Identities = 35/95 (36%), Positives = 39/95 (41%), Gaps = 27/95 (28%)
Query: 319 SSLGGTGAAEGPAGGFMVVAGGSGSGNCGEVASGLTLGPPGTAHLYQGLGPVVLSGPVSH 378
S+ GG G GP + GGSG G+ VAS LT P AH SG SH
Sbjct: 129 SAAGGPG---GPLSVYPGAGGGSGGGSGSSVAS-LT---PTAAH----------SG--SH 169
Query: 379 LMPFPGPLLGSPTGSFPTGPMPPTTSTTVVAPLSS 413
L FP PT P P TT +P SS
Sbjct: 170 LFGFP------PTPPKEVSPDPSTTG--AASPASS 196
>gi|20070352 GATA binding protein 2 isoform 1 [Homo sapiens]
Length = 480
Score = 242 bits (617), Expect = 5e-64
Identities = 127/205 (61%), Positives = 143/205 (69%), Gaps = 11/205 (5%)
Query: 122 EDLDG-KGSTSFLETLKTER---LSPDLLTLGPALPSSLPVPNSAYGGP----DFSSTFF 173
ED DG K S E++K E L P L T+G + P+P P D+SS F
Sbjct: 206 EDKDGVKYQVSLTESMKMESGSPLRPGLATMGTQPATHHPIPTYPSYVPAAAHDYSSGLF 265
Query: 174 SPTGSPLNSAAYSSPKLRGTLPLPPC-EARECVNCGATATPLWRRDRTGHYLCNACGLYH 232
P G A+ +PK R C E RECVNCGATATPLWRRD TGHYLCNACGLYH
Sbjct: 266 HPGGFLGGPASSFTPKQRSKAR--SCSEGRECVNCGATATPLWRRDGTGHYLCNACGLYH 323
Query: 233 KMNGQNRPLIRPKKRLIVSKRAGTQCTNCQTTTTTLWRRNASGDPVCNACGLYYKLHQVN 292
KMNGQNRPLI+PK+RL ++RAGT C NCQTTTTTLWRRNA+GDPVCNACGLYYKLH VN
Sbjct: 324 KMNGQNRPLIKPKRRLSAARRAGTCCANCQTTTTTLWRRNANGDPVCNACGLYYKLHNVN 383
Query: 293 RPLTMRKDGIQTRNRKASGKGKKKR 317
RPLTM+K+GIQTRNRK S K KK +
Sbjct: 384 RPLTMKKEGIQTRNRKMSNKSKKSK 408
Score = 29.6 bits (65), Expect = 5.2
Identities = 35/95 (36%), Positives = 39/95 (41%), Gaps = 27/95 (28%)
Query: 319 SSLGGTGAAEGPAGGFMVVAGGSGSGNCGEVASGLTLGPPGTAHLYQGLGPVVLSGPVSH 378
S+ GG G GP + GGSG G+ VAS LT P AH SG SH
Sbjct: 129 SAAGGPG---GPLSVYPGAGGGSGGGSGSSVAS-LT---PTAAH----------SG--SH 169
Query: 379 LMPFPGPLLGSPTGSFPTGPMPPTTSTTVVAPLSS 413
L FP PT P P TT +P SS
Sbjct: 170 LFGFP------PTPPKEVSPDPSTTG--AASPASS 196
>gi|50541959 GATA binding protein 3 isoform 1 [Homo sapiens]
Length = 444
Score = 234 bits (598), Expect = 8e-62
Identities = 109/154 (70%), Positives = 122/154 (79%), Gaps = 9/154 (5%)
Query: 166 PDFSSTFFSPT----GSPLNSAAYSSPKLRGTLPLPPCEARECVNCGATATPLWRRDRTG 221
P++SS F P+ GSP S PK R + E RECVNCGAT+TPLWRRD TG
Sbjct: 227 PEYSSGLFPPSSLLGGSPTGFGCKSRPKARSST-----EGRECVNCGATSTPLWRRDGTG 281
Query: 222 HYLCNACGLYHKMNGQNRPLIRPKKRLIVSKRAGTQCTNCQTTTTTLWRRNASGDPVCNA 281
HYLCNACGLYHKMNGQNRPLI+PK+RL ++RAGT C NCQTTTTTLWRRNA+GDPVCNA
Sbjct: 282 HYLCNACGLYHKMNGQNRPLIKPKRRLSAARRAGTSCANCQTTTTTLWRRNANGDPVCNA 341
Query: 282 CGLYYKLHQVNRPLTMRKDGIQTRNRKASGKGKK 315
CGLYYKLH +NRPLTM+K+GIQTRNRK S K KK
Sbjct: 342 CGLYYKLHNINRPLTMKKEGIQTRNRKMSSKSKK 375
>gi|4503929 GATA binding protein 3 isoform 2 [Homo sapiens]
Length = 443
Score = 232 bits (592), Expect = 4e-61
Identities = 108/154 (70%), Positives = 121/154 (78%), Gaps = 10/154 (6%)
Query: 166 PDFSSTFFSPT----GSPLNSAAYSSPKLRGTLPLPPCEARECVNCGATATPLWRRDRTG 221
P++SS F P+ GSP S PK R + RECVNCGAT+TPLWRRD TG
Sbjct: 227 PEYSSGLFPPSSLLGGSPTGFGCKSRPKARSST------GRECVNCGATSTPLWRRDGTG 280
Query: 222 HYLCNACGLYHKMNGQNRPLIRPKKRLIVSKRAGTQCTNCQTTTTTLWRRNASGDPVCNA 281
HYLCNACGLYHKMNGQNRPLI+PK+RL ++RAGT C NCQTTTTTLWRRNA+GDPVCNA
Sbjct: 281 HYLCNACGLYHKMNGQNRPLIKPKRRLSAARRAGTSCANCQTTTTTLWRRNANGDPVCNA 340
Query: 282 CGLYYKLHQVNRPLTMRKDGIQTRNRKASGKGKK 315
CGLYYKLH +NRPLTM+K+GIQTRNRK S K KK
Sbjct: 341 CGLYYKLHNINRPLTMKKEGIQTRNRKMSSKSKK 374
>gi|224611701 GATA binding protein 2 isoform 2 [Homo sapiens]
Length = 466
Score = 214 bits (545), Expect = 1e-55
Identities = 119/205 (58%), Positives = 133/205 (64%), Gaps = 25/205 (12%)
Query: 122 EDLDG-KGSTSFLETLKTER---LSPDLLTLGPALPSSLPVPNSAYGGP----DFSSTFF 173
ED DG K S E++K E L P L T+G + P+P P D+SS F
Sbjct: 206 EDKDGVKYQVSLTESMKMESGSPLRPGLATMGTQPATHHPIPTYPSYVPAAAHDYSSGLF 265
Query: 174 SPTGSPLNSAAYSSPKLRGTLPLPPC-EARECVNCGATATPLWRRDRTGHYLCNACGLYH 232
P G A+ +PK R C E RECVNCGATATPLWRRD TGHYLCNACGLYH
Sbjct: 266 HPGGFLGGPASSFTPKQRSKAR--SCSEGRECVNCGATATPLWRRDGTGHYLCNACGLYH 323
Query: 233 KMNGQNRPLIRPKKRLIVSKRAGTQCTNCQTTTTTLWRRNASGDPVCNACGLYYKLHQVN 292
KMNGQNRPLI+PK+RL TTTTTLWRRNA+GDPVCNACGLYYKLH VN
Sbjct: 324 KMNGQNRPLIKPKRRL--------------TTTTTLWRRNANGDPVCNACGLYYKLHNVN 369
Query: 293 RPLTMRKDGIQTRNRKASGKGKKKR 317
RPLTM+K+GIQTRNRK S K KK +
Sbjct: 370 RPLTMKKEGIQTRNRKMSNKSKKSK 394
Score = 29.6 bits (65), Expect = 5.2
Identities = 35/95 (36%), Positives = 39/95 (41%), Gaps = 27/95 (28%)
Query: 319 SSLGGTGAAEGPAGGFMVVAGGSGSGNCGEVASGLTLGPPGTAHLYQGLGPVVLSGPVSH 378
S+ GG G GP + GGSG G+ VAS LT P AH SG SH
Sbjct: 129 SAAGGPG---GPLSVYPGAGGGSGGGSGSSVAS-LT---PTAAH----------SG--SH 169
Query: 379 LMPFPGPLLGSPTGSFPTGPMPPTTSTTVVAPLSS 413
L FP PT P P TT +P SS
Sbjct: 170 LFGFP------PTPPKEVSPDPSTTG--AASPASS 196
>gi|17998698 GATA binding protein 5 [Homo sapiens]
Length = 397
Score = 207 bits (528), Expect = 1e-53
Identities = 142/360 (39%), Positives = 173/360 (48%), Gaps = 50/360 (13%)
Query: 4 PGLGSLGTSEPLPQFVDPALVSSTPESGVFFPSGPEGLDAAASSTAPSTATAAAAALAYY 63
PG GS P FV PA V S P+ + AA TATA ++A
Sbjct: 26 PGAGS-------PMFVPPARVPSMLSYLSGCEPSPQPPELAARPGWAQTATADSSAFGPG 78
Query: 64 RDAEAYRHSPVFQVYPLLNCMEGIPGGSPYAGWAYGKTGLYPASTVCPTREDSPPQAVED 123
H P +P + G PG AG G+ G + P + + P
Sbjct: 79 SPHPPAAHPPGATAFPFAHSPSG-PGSGGSAG---GRDGSAYQGALLPREQFAAP----- 129
Query: 124 LDGKGSTSFLETLKTERLSPDLLTLGPALPSSLPVPNSAYGGPDFSSTFFSPTGSPLN-S 182
LG + +S AY PD + ++ T P + S
Sbjct: 130 ------------------------LGRPVGTSYSATYPAYVSPDVAQSW---TAGPFDGS 162
Query: 183 AAYSSPKLRGT-----LPLPPCEARECVNCGATATPLWRRDRTGHYLCNACGLYHKMNGQ 237
+ P R T L P E RECVNCGA +TPLWRRD TGHYLCNACGLYHKMNG
Sbjct: 163 VLHGLPGRRPTFVSDFLEEFPGEGRECVNCGALSTPLWRRDGTGHYLCNACGLYHKMNGV 222
Query: 238 NRPLIRPKKRLIVSKRAGTQCTNCQTTTTTLWRRNASGDPVCNACGLYYKLHQVNRPLTM 297
NRPL+RP+KRL S+RAG CTNC TT TTLWRRN+ G+PVCNACGLY KLH V RPL M
Sbjct: 223 NRPLVRPQKRLSSSRRAGLCCTNCHTTNTTLWRRNSEGEPVCNACGLYMKLHGVPRPLAM 282
Query: 298 RKDGIQTRNRKASGKGKKKRGSSLGGTGAAEGPAGGFMVVAGGSGSGNCGEVASGLTLGP 357
+K+ IQTR RK K RGSS A+ P+ + + S +AS + GP
Sbjct: 283 KKESIQTRKRKPKTIA-KARGSSGSTRNASASPSAVASTDSSAATSKAKPSLASPVCPGP 341
>gi|33188461 GATA binding protein 4 [Homo sapiens]
Length = 442
Score = 202 bits (514), Expect = 5e-52
Identities = 110/217 (50%), Positives = 128/217 (58%), Gaps = 19/217 (8%)
Query: 200 EARECVNCGATATPLWRRDRTGHYLCNACGLYHKMNGQNRPLIRPKKRLIVSKRAGTQCT 259
E RECVNCGA +TPLWRRD TGHYLCNACGLYHKMNG NRPLI+P++RL S+R G C
Sbjct: 213 EGRECVNCGAMSTPLWRRDGTGHYLCNACGLYHKMNGINRPLIKPQRRLSASRRVGLSCA 272
Query: 260 NCQTTTTTLWRRNASGDPVCNACGLYYKLHQVNRPLTMRKDGIQTRNRKASGKGKKKRGS 319
NCQTTTTTLWRRNA G+PVCNACGLY KLH V RPL MRK+GIQTR RK K K
Sbjct: 273 NCQTTTTTLWRRNAEGEPVCNACGLYMKLHGVPRPLAMRKEGIQTRKRKPKNLNKSK--- 329
Query: 320 SLGGTGAAEGPAGGFMVVAGGSGSGNCGEVASGLTLGP----PGTAHLY-------QGLG 368
T AA + +G S + + +S + P PG + Y Q
Sbjct: 330 ----TPAAPSGSESLPPASGASSNSSNATTSSSEEMRPIKTEPGLSSHYGHSSSVSQTFS 385
Query: 369 PVVLSGPVSHLMPFPGPLLGSPTG-SFPTGPMPPTTS 404
+SG + P L SP G + P P T+S
Sbjct: 386 VSAMSGHGPSIHPVLSALKLSPQGYASPVSQSPQTSS 422
>gi|40288197 GATA binding protein 6 [Homo sapiens]
Length = 595
Score = 192 bits (487), Expect = 6e-49
Identities = 108/230 (46%), Positives = 127/230 (55%), Gaps = 27/230 (11%)
Query: 157 PVPNSAYGGPDFSSTFFSPTGSPLNSAAYSSPKLRGTLPLPP------------CEAREC 204
P P S Y G + + P G P + S + R PLP E+REC
Sbjct: 334 PSPYSPYVGAPLTPAW--PAG-PFETPVLHSLQSRAGAPLPVPRGPSADLLEDLSESREC 390
Query: 205 VNCGATATPLWRRDRTGHYLCNACGLYHKMNGQNRPLIRPKKRLIVSKRAGTQCTNCQTT 264
VNCG+ TPLWRRD TGHYLCNACGLY KMNG +RPLI+P+KR+ S+R G C NC TT
Sbjct: 391 VNCGSIQTPLWRRDGTGHYLCNACGLYSKMNGLSRPLIKPQKRVPSSRRLGLSCANCHTT 450
Query: 265 TTTLWRRNASGDPVCNACGLYYKLHQVNRPLTMRKDGIQTRNRKASGKGKKKRGSSLGGT 324
TTTLWRRNA G+PVCNACGLY KLH V RPL M+K+GIQTR RK K K S
Sbjct: 451 TTTLWRRNAEGEPVCNACGLYMKLHGVPRPLAMKKEGIQTRKRKPKNINKSKTCSGNSNN 510
Query: 325 GAAEGPAGGFMVVAGGSGSGNCGEVASGLTLGPPGTAHLYQGLGPVVLSG 374
P + S S +C + S P T G G V++G
Sbjct: 511 SIPMTP------TSTSSNSDDCSKNTS------PTTQPTASGAGAPVMTG 548
>gi|90652851 zinc finger transcription factor TRPS1 [Homo sapiens]
Length = 1294
Score = 70.5 bits (171), Expect = 3e-12
Identities = 40/99 (40%), Positives = 54/99 (54%), Gaps = 13/99 (13%)
Query: 235 NGQNRPLIRPKKRLIVSKRAGTQCTNCQTTTTTLWRRNASGDPVCNACGLYYKLHQVNRP 294
+G+N+ + L + +G C NC TT T+LWR+NA+G VCNACGLY KLH RP
Sbjct: 886 SGENKSKDESQSLLRRRRGSGVFCANCLTTKTSLWRKNANGGYVCNACGLYQKLHSTPRP 945
Query: 295 LTMRKDG-----IQTRNRK--------ASGKGKKKRGSS 320
L + K I+ R RK A K++RGS+
Sbjct: 946 LNIIKQNNGEQIIRRRTRKRLNPEALQAEQLNKQQRGSN 984
Score = 53.9 bits (128), Expect = 3e-07
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 204 CVNCGATATPLWRRDRTGHYLCNACGLYHKMNGQNRPL 241
C NC T T LWR++ G Y+CNACGLY K++ RPL
Sbjct: 909 CANCLTTKTSLWRKNANGGYVCNACGLYQKLHSTPRPL 946
>gi|157266269 GATA like protein-1 [Homo sapiens]
Length = 271
Score = 49.3 bits (116), Expect = 6e-06
Identities = 37/135 (27%), Positives = 50/135 (37%), Gaps = 39/135 (28%)
Query: 150 PALPSSLPVPNSAYGGPDFSSTFFSPTGSPLNSAAYSSPKLRGTLPLPPCEARECVNCGA 209
P S P A GGP P G+ +SA + E R C +C
Sbjct: 168 PCSSRSQESPADAVGGPAAH-----PGGTEAHSAGSEA-----------LEPRRCASCRT 211
Query: 210 TATPLWRRDRTGHYLCNACGLYHKMNGQNRPLIRPKKRLIVSKRAGTQCTNCQTTTTTLW 269
TPLWR G LCNACG+ + K+ GT+C++C
Sbjct: 212 QRTPLWRDAEDGTPLCNACGIRY-------------------KKYGTRCSSCWLVP---- 248
Query: 270 RRNASGDPVCNACGL 284
R+N +C CG+
Sbjct: 249 RKNVQPKRLCGRCGV 263
Score = 43.9 bits (102), Expect = 3e-04
Identities = 16/31 (51%), Positives = 21/31 (67%)
Query: 257 QCTNCQTTTTTLWRRNASGDPVCNACGLYYK 287
+C +C+T T LWR G P+CNACG+ YK
Sbjct: 205 RCASCRTQRTPLWRDAEDGTPLCNACGIRYK 235
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 39.7 bits (91), Expect = 0.005
Identities = 31/93 (33%), Positives = 38/93 (40%), Gaps = 15/93 (16%)
Query: 315 KKRGSSLGGTGAAEGPAGGFMVVAGGSGSGNCGEVASGLTLGPPGTAHLYQGLGPVVLS- 373
K +G+ GG G G GGF GG G G G G GPPG L+Q P + S
Sbjct: 61 KPKGAGAGGGGGGFGGGGGF---GGGGGGGGGGSFGGG---GPPGLGGLFQAGMPKLRST 114
Query: 374 --------GPVSHLMPFPGPLLGSPTGSFPTGP 398
G L+P G + S P+GP
Sbjct: 115 ANRDNDSGGSRPPLLPPGGRSTSAKPFSPPSGP 147
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 39.7 bits (91), Expect = 0.005
Identities = 31/93 (33%), Positives = 38/93 (40%), Gaps = 15/93 (16%)
Query: 315 KKRGSSLGGTGAAEGPAGGFMVVAGGSGSGNCGEVASGLTLGPPGTAHLYQGLGPVVLS- 373
K +G+ GG G G GGF GG G G G G GPPG L+Q P + S
Sbjct: 61 KPKGAGAGGGGGGFGGGGGF---GGGGGGGGGGSFGGG---GPPGLGGLFQAGMPKLRST 114
Query: 374 --------GPVSHLMPFPGPLLGSPTGSFPTGP 398
G L+P G + S P+GP
Sbjct: 115 ANRDNDSGGSRPPLLPPGGRSTSAKPFSPPSGP 147
>gi|88759346 GATA zinc finger domain containing 1 [Homo sapiens]
Length = 269
Score = 38.9 bits (89), Expect = 0.009
Identities = 26/101 (25%), Positives = 39/101 (38%), Gaps = 37/101 (36%)
Query: 258 CTNCQTTTTTLWRRNASGDPVCNACGLYYKLHQVNRPLTMRKDGIQTRNRKASGKGKKKR 317
C+ C+TT++++W++ A G+ +C+ C +G+G
Sbjct: 9 CSVCKTTSSSMWKKGAQGEILCHHC---------------------------TGRG---- 37
Query: 318 GSSLGGTGAAEGPAGGFMVVAGGSGSGNCGEVASGLTLGPP 358
G GA G AGG GGSG G G T P
Sbjct: 38 --GAGSGGAGSGAAGG----TGGSGGGGFGAATFASTSATP 72
>gi|112421108 capicua homolog [Homo sapiens]
Length = 1608
Score = 38.5 bits (88), Expect = 0.011
Identities = 52/195 (26%), Positives = 75/195 (38%), Gaps = 15/195 (7%)
Query: 12 SEPLPQFVDPALVSSTPESGVFFPSGPEGLDAAASSTAPSTATAAAAALAYYRDA-EAYR 70
S+ P V S+TP + P GP A + +A A ++ Y A +A R
Sbjct: 1112 SQAPPSLVYTVATSTTPPAATILPKGPPAPATATPAPTSPFPSATAGSMTYSLVAPKAQR 1171
Query: 71 HSPVFQVYPLLNCMEGIPGGSPYAGWAYGKTGLYPASTVCPTREDSPPQAVEDLDGKGST 130
SP + + IP GS AG A G+ G P + P P +L+G+ +
Sbjct: 1172 PSPK-APQKVKAAIASIPVGSFEAG-ASGRPGPAPRQPLEPGPVREPTAPESELEGQPTP 1229
Query: 131 SFLETLKTERLSPDLLTLGPALPSSLPVPNSAYGGPDFSSTFFSPTGSPLNSAAYSSP-- 188
L E +P + P LP SA G +S F P +S+ + P
Sbjct: 1230 PAPPPL-PETWTPTARS-SPPLPPPAEERTSAKGPETMASKF------PSSSSDWRVPGQ 1281
Query: 189 --KLRGTLPLPPCEA 201
+ RG P PP A
Sbjct: 1282 GLENRGEPPTPPSPA 1296
>gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens]
Length = 1970
Score = 38.1 bits (87), Expect = 0.015
Identities = 60/207 (28%), Positives = 81/207 (39%), Gaps = 43/207 (20%)
Query: 4 PGLGSLGT------SEPLPQF-VDPALV----SSTPESGVFFPSGPEGLDAAASSTAPST 52
PGLG+ G S P P + PA+ +TP G + PS G+ A+ +PS
Sbjct: 1491 PGLGAAGPTGMFFGSAPSPMGGISPAMTPWNQGATPAYGAWSPSVGSGMTPGAAGFSPSA 1550
Query: 53 ATAAAAALAYYRDAEAYRHSPVFQVYPLLNCMEGIPG-GSPYAGWAYGKTGLYPASTVCP 111
A+ A+ Y SP + P G PG SPY P + P
Sbjct: 1551 ASDASGFSPGY--------SPAWSPTP---GSPGSPGPSSPYIP--------SPGGAMSP 1591
Query: 112 TREDSPPQAVEDLDGKGSTSFLETLKTERLSPDLLTLGPALPSSLPV-PNSAYGGPDFSS 170
+ + P A E G T ++ SP + P PS P PN + P +S
Sbjct: 1592 SYSPTSP-AYEPRSPGGYTP-----QSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSP 1645
Query: 171 TFFSPTGSPLNSAAYS--SPKLRGTLP 195
T SP+ SP S +YS SP T P
Sbjct: 1646 T--SPSYSP-TSPSYSPTSPSYSPTSP 1669
>gi|24497536 homeobox C13 [Homo sapiens]
Length = 330
Score = 38.1 bits (87), Expect = 0.015
Identities = 31/86 (36%), Positives = 34/86 (39%), Gaps = 10/86 (11%)
Query: 326 AAEGPAGGFMVVAGGSGSGNCGEVASGLTLGPPGTAHLYQGLGPVVLSGPVSHLMP-FPG 384
AAE GG GG G G G G + PG A GLG S P SH P
Sbjct: 23 AAESGIGG----GGGGGGGGTGGAGGGCSGASPGKAPSMDGLGS---SCPASHCRDLLPH 75
Query: 385 PLLGSPTGSFPTGPMPPTTSTTVVAP 410
P+LG P P G T + AP
Sbjct: 76 PVLGRPPA--PLGAPQGAVYTDIPAP 99
>gi|44955926 genetic suppressor element 1 isoform 1 [Homo sapiens]
Length = 1217
Score = 38.1 bits (87), Expect = 0.015
Identities = 44/170 (25%), Positives = 69/170 (40%), Gaps = 21/170 (12%)
Query: 4 PGLGSLGTSEPLPQFVDPALVSSTPESGVFFPSGPEGLDAAASSTAPSTATAAAAALAYY 63
P LG L T+ V+P ++ +P +G PSG +A S+ A +++ AAA
Sbjct: 11 PSLGMLSTATRTTATVNP--LTPSPLNGALVPSGSPATSSALSAQAAPSSSFAAALRKLA 68
Query: 64 RDAEAYR-----------HSPVFQVYPLLNCMEGIPGGS---PYAGWAYGKTGLYPASTV 109
+ AE R SP + + +P G P G + T P T+
Sbjct: 69 KQAEEPRGSSLSSESSPVSSPATNHSSPASTPKRVPMGPIIVPPGGHSVPSTP--PVVTI 126
Query: 110 CPTREDS---PPQAVEDLDGKGSTSFLETLKTERLSPDLLTLGPALPSSL 156
PT+ + ++ +D + S+ E L E P GPA+PS L
Sbjct: 127 APTKTVNGVWRSESRQDAGSRSSSGGRERLIVEPPLPQEKAGGPAIPSHL 176
>gi|6912752 zinc finger protein 281 [Homo sapiens]
Length = 895
Score = 38.1 bits (87), Expect = 0.015
Identities = 26/81 (32%), Positives = 32/81 (39%), Gaps = 1/81 (1%)
Query: 322 GGTGAAEGPAGGFMVVAGGSGSGNCGEVASGLTLGPPGTAHLYQGLGPVV-LSGPVSHLM 380
GGTG++ G G GG G G+ G A P G L PV + P
Sbjct: 12 GGTGSSGGSGSGGGGSGGGGGGGSSGRRAEMEPTFPQGMVMFNHRLPPVTSFTRPAGSAA 71
Query: 381 PFPGPLLGSPTGSFPTGPMPP 401
P P +L S T + P PP
Sbjct: 72 PPPQCVLSSSTSAAPAAEPPP 92
>gi|31543543 retinoic acid induced 17 [Homo sapiens]
Length = 1067
Score = 37.0 bits (84), Expect = 0.033
Identities = 46/200 (23%), Positives = 74/200 (37%), Gaps = 23/200 (11%)
Query: 3 FPGLGSLGTSEP----------LPQFVDPALVSSTPESGVFFPSGPEGLDAAASSTAPST 52
+PG G G S P +P P + P + + AAA++TA +T
Sbjct: 244 YPGSGGFGASYPGGPNAPAGMGIPPHTRPPADFTQPAA-----AAAAAAVAAAAATATAT 298
Query: 53 ATAAAAALAYYRDAEAYRHSPVFQVYPLLNCMEGIPGGSPYAGWAYGKTGLYPASTVCPT 112
ATA AAL ++ + ++ P+ + PG A A+ + P+
Sbjct: 299 ATATVAALQETQNKDINQYGPMGPTQAYNSQFMNQPGPRGPASMGGSMNPASMAAGMTPS 358
Query: 113 REDSPPQAVEDLDGKGSTSFLETLKTERLSPDLLTLGPALPSSLPVPNSAY---GGPDFS 169
PP + G + F +R+ P GP P SLP+ N G P++
Sbjct: 359 GMSGPPMGMNQPRPPGISPF--GTHGQRM-PQQTYPGPR-PQSLPIQNIKRPYPGEPNYG 414
Query: 170 STFFSPTGS-PLNSAAYSSP 188
+ + P P Y +P
Sbjct: 415 NQQYGPNSQFPTQPGQYPAP 434
>gi|239743232 PREDICTED: hypothetical protein XP_002342775 [Homo
sapiens]
Length = 834
Score = 35.0 bits (79), Expect = 0.12
Identities = 50/188 (26%), Positives = 68/188 (36%), Gaps = 27/188 (14%)
Query: 3 FPGLGSLGTSEPLPQFVDPALVSSTPESGVFFPSGPEGLDAAASSTAPSTATAAAAALAY 62
F GL S TS P + A S+ S F G + +++ ST STATAA+ +
Sbjct: 392 FTGLAS-ATSAVAP--ITSASPSTDSASKPAFGFGINSVSSSSVSTTTSTATAASQPFLF 448
Query: 63 YR-DAEAYRHSPVFQVYPLLNCMEGIPGGSPYAGWAYGKTGLYPASTVCPTREDSPPQAV 121
A A +P GS + +GK P +T T S P AV
Sbjct: 449 GAPQASAASFTPAM--------------GSIFQ---FGKPPALPTTTTVTTFSQSLPTAV 491
Query: 122 EDLDGKGSTSFLETLKTERLSPDLLTLGPALPSSLPVPNSAYGGPDFSSTFFSPTGSPLN 181
+ F L T PA S + S P F+ F S SPL
Sbjct: 492 PTATSSSAADF------SGFGSTLATSAPATSSQPTLTFSNTSTPTFNIPFGSSAKSPLP 545
Query: 182 SAAYSSPK 189
S ++P+
Sbjct: 546 SYPGANPQ 553
>gi|150378545 POM121 membrane glycoprotein (rat)-like [Homo sapiens]
Length = 987
Score = 35.0 bits (79), Expect = 0.12
Identities = 50/188 (26%), Positives = 68/188 (36%), Gaps = 27/188 (14%)
Query: 3 FPGLGSLGTSEPLPQFVDPALVSSTPESGVFFPSGPEGLDAAASSTAPSTATAAAAALAY 62
F GL S TS P + A S+ S F G + +++ ST STATAA+ +
Sbjct: 543 FTGLAS-ATSAVAP--ITSASPSTDSASKPAFGFGINSVSSSSVSTTTSTATAASQPFLF 599
Query: 63 YR-DAEAYRHSPVFQVYPLLNCMEGIPGGSPYAGWAYGKTGLYPASTVCPTREDSPPQAV 121
A A +P GS + +GK P +T T S P AV
Sbjct: 600 GAPQASAASFTPAM--------------GSIFQ---FGKPPALPTTTTVTTFSQSLPTAV 642
Query: 122 EDLDGKGSTSFLETLKTERLSPDLLTLGPALPSSLPVPNSAYGGPDFSSTFFSPTGSPLN 181
+ F L T PA S + S P F+ F S SPL
Sbjct: 643 PTATSSSAADF------SGFGSTLATSAPATSSQPTLTFSNTSTPTFNIPFGSSAKSPLP 696
Query: 182 SAAYSSPK 189
S ++P+
Sbjct: 697 SYPGANPQ 704
>gi|239754668 PREDICTED: mucin 12 [Homo sapiens]
Length = 1952
Score = 34.7 bits (78), Expect = 0.16
Identities = 51/189 (26%), Positives = 68/189 (35%), Gaps = 24/189 (12%)
Query: 29 ESGVFFPSGPEGLDAAASSTAPSTATAAAAALAYYRDAEAYRHSPVFQVYPLLNCMEGIP 88
E F S P D S A +T++ + H+ F P M G+
Sbjct: 996 EKSTTFYSSPRSPDTTLSP-ASTTSSGVSEESTTSHSRPGSTHTTAF---PGSTTMPGVS 1051
Query: 89 GGSPYAGWAYGKTG--LYPASTVCPTREDSPPQAVEDLDGKGSTSFLETLKTERLSPDLL 146
S + + G T L P ST T P++ G GST L PD
Sbjct: 1052 QESTASHSSPGSTDTTLSPRST---TASSLGPESTTFHSGPGSTE-------TTLLPDNT 1101
Query: 147 TLGPALPSSLPVPNSAYGGPDFSSTFFSPTGSPLN---SAAYSS-PKLRGTLPLPPCEAR 202
T L +S PV +S+ G P T SP GS S + S P + T+P PP
Sbjct: 1102 TASGLLEASTPV-HSSTGSP---RTTLSPAGSTTRQGESTTFQSWPSSKDTMPAPPTTTS 1157
Query: 203 ECVNCGATA 211
V T+
Sbjct: 1158 AFVELSTTS 1166
>gi|49574532 glycogen synthase kinase 3 alpha [Homo sapiens]
Length = 483
Score = 34.7 bits (78), Expect = 0.16
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 5/50 (10%)
Query: 310 SGKGKKKRGSSLGGTGAAEGPAGGFMVVAGGSGSGNCGEVASGLTLGPPG 359
+G GK G+ GG GA+ G GGSG G G +G + PPG
Sbjct: 46 TGGGKASVGAMGGGVGASSSGGG-----PGGSGGGGSGGPGAGTSFPPPG 90
Score = 30.0 bits (66), Expect = 4.0
Identities = 27/90 (30%), Positives = 33/90 (36%), Gaps = 4/90 (4%)
Query: 311 GKGKKKRGSSL---GGTGAAEGPAGGFMVVAGGSGSGNCGEVASGLTLGPPGTAHLYQGL 367
G G+ + S GG G G GG GG+G G A G +G + G
Sbjct: 13 GSGRARTSSFAEPGGGGGGGGGGPGGSASGPGGTGGGKASVGAMGGGVGASSSGGGPGGS 72
Query: 368 GPVVLSGP-VSHLMPFPGPLLGSPTGSFPT 396
G GP P PG LG +G T
Sbjct: 73 GGGGSGGPGAGTSFPPPGVKLGRDSGKVTT 102
>gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens]
Length = 1192
Score = 34.3 bits (77), Expect = 0.21
Identities = 33/108 (30%), Positives = 38/108 (35%), Gaps = 13/108 (12%)
Query: 308 KASGKGKKKRGSSLGGTGAAEGPAGGFMVVAGGSGSGNCGEVASGLTLGPPGTAHLYQGL 367
++ GK + K S GTGA+ A AGG GS G G G +G
Sbjct: 214 ESEGKPRVKGSKSSAGTGASVS-AAATAAAAGGGGSTASTSGGVGAGAGARGKLSPRKGK 272
Query: 368 -----------GPVVLSGPVSHLMPFPGPLLGSPTGSF-PTGPMPPTT 403
GP S P L P P P S P GP PP T
Sbjct: 273 SKTLDNSDLHPGPPAGSPPPLTLPPTPSPATAVTAASAQPPGPAPPIT 320
>gi|7706435 headcase [Homo sapiens]
Length = 543
Score = 34.3 bits (77), Expect = 0.21
Identities = 18/61 (29%), Positives = 27/61 (44%)
Query: 299 KDGIQTRNRKASGKGKKKRGSSLGGTGAAEGPAGGFMVVAGGSGSGNCGEVASGLTLGPP 358
K G + + +SG ++ +L GAA AGG + A G G+ G +G G
Sbjct: 8 KGGRKNKRANSSGDEQENGAGALAAAGAAGAAAGGALAAAAGCGAAAAGAPGAGGAAGAG 67
Query: 359 G 359
G
Sbjct: 68 G 68
>gi|51479192 ring finger protein 1 [Homo sapiens]
Length = 406
Score = 34.3 bits (77), Expect = 0.21
Identities = 21/48 (43%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Query: 314 KKKRGSSLGGTGAAEGPAGGFMVVAGGSG---SGNCGEVASGLTLGPP 358
K+ RG GG+ G GG V GG+G SG+ G G TLGPP
Sbjct: 201 KRPRGGGAGGSSVGTG-GGGTGGVGGGAGSEDSGDRGGTLGGGTLGPP 247
>gi|89026265 PREDICTED: mucin 12 [Homo sapiens]
Length = 978
Score = 33.9 bits (76), Expect = 0.28
Identities = 51/189 (26%), Positives = 67/189 (35%), Gaps = 24/189 (12%)
Query: 29 ESGVFFPSGPEGLDAAASSTAPSTATAAAAALAYYRDAEAYRHSPVFQVYPLLNCMEGIP 88
E F S P D S A +T++ + H+ F P M G+
Sbjct: 25 EKSTTFYSSPRSPDTTLSP-ASTTSSGVSEESTTSHSRPGSTHTTAF---PGSTTMPGVS 80
Query: 89 GGSPYAGWAYGKTG--LYPASTVCPTREDSPPQAVEDLDGKGSTSFLETLKTERLSPDLL 146
S + + G T L P ST T P++ G GST L PD
Sbjct: 81 QESTASHSSPGSTDTTLSPGST---TASSLGPESTTFHSGPGSTE-------TTLLPDNT 130
Query: 147 TLGPALPSSLPVPNSAYGGPDFSSTFFSPTGSPLN---SAAYSS-PKLRGTLPLPPCEAR 202
T L +S PV +S+ G P T SP GS S + S P + T P PP
Sbjct: 131 TASGLLEASTPV-HSSTGSPH---TTLSPAGSTTRQGESTTFQSWPNSKDTTPAPPTTTS 186
Query: 203 ECVNCGATA 211
V T+
Sbjct: 187 AFVELSTTS 195
>gi|239743293 PREDICTED: mucin 12 [Homo sapiens]
Length = 5478
Score = 33.9 bits (76), Expect = 0.28
Identities = 51/189 (26%), Positives = 67/189 (35%), Gaps = 24/189 (12%)
Query: 29 ESGVFFPSGPEGLDAAASSTAPSTATAAAAALAYYRDAEAYRHSPVFQVYPLLNCMEGIP 88
E F S P D S A +T++ + H+ F P M G+
Sbjct: 3246 EKSTTFYSSPRSPDTTLSP-ASTTSSGVSEESTTSHSRPGSTHTTAF---PGSTTMPGVS 3301
Query: 89 GGSPYAGWAYGKTG--LYPASTVCPTREDSPPQAVEDLDGKGSTSFLETLKTERLSPDLL 146
S + + G T L P ST T P++ G GST L PD
Sbjct: 3302 QESTASHSSPGSTDTTLSPGST---TASSLGPESTTFHSGPGSTE-------TTLLPDNT 3351
Query: 147 TLGPALPSSLPVPNSAYGGPDFSSTFFSPTGSPLN---SAAYSS-PKLRGTLPLPPCEAR 202
T L +S PV +S+ G P T SP GS S + S P + T P PP
Sbjct: 3352 TASGLLEASTPV-HSSTGSPH---TTLSPAGSTTRQGESTTFQSWPNSKDTTPAPPTTTS 3407
Query: 203 ECVNCGATA 211
V T+
Sbjct: 3408 AFVELSTTS 3416
Score = 32.7 bits (73), Expect = 0.62
Identities = 50/189 (26%), Positives = 67/189 (35%), Gaps = 24/189 (12%)
Query: 29 ESGVFFPSGPEGLDAAASSTAPSTATAAAAALAYYRDAEAYRHSPVFQVYPLLNCMEGIP 88
E F S P D S A +T++ + H+ F P M G+
Sbjct: 1689 EKSTTFYSSPRSPDTTLSP-ASTTSSGVSEESTTSHSRPGSTHTTAF---PGSTTMPGVS 1744
Query: 89 GGSPYAGWAYGKTG--LYPASTVCPTREDSPPQAVEDLDGKGSTSFLETLKTERLSPDLL 146
S + + G T L P ST T P++ GST L PD
Sbjct: 1745 QESTASHSSPGSTDTTLSPGST---TASSLGPESTTFHSSPGSTE-------TTLLPDNT 1794
Query: 147 TLGPALPSSLPVPNSAYGGPDFSSTFFSPTGSPLN---SAAYSS-PKLRGTLPLPPCEAR 202
T L +S PV +S+ G P T SP GS S + S P + T+P PP
Sbjct: 1795 TASGLLEASTPV-HSSTGSPH---TTLSPAGSTTRQGESTTFQSWPSSKDTMPAPPTTTS 1850
Query: 203 ECVNCGATA 211
V T+
Sbjct: 1851 AFVELSTTS 1859
Score = 32.3 bits (72), Expect = 0.81
Identities = 50/189 (26%), Positives = 66/189 (34%), Gaps = 24/189 (12%)
Query: 29 ESGVFFPSGPEGLDAAASSTAPSTATAAAAALAYYRDAEAYRHSPVFQVYPLLNCMEGIP 88
E F S P D S A +T++ + H+ F P M G+
Sbjct: 4329 EKSTTFYSSPRSPDTTLSP-ASTTSSGVSEESTTSHSRPGSMHTTAF---PSSTTMPGVS 4384
Query: 89 GGSPYAGWAYGKTG--LYPASTVCPTREDSPPQAVEDLDGKGSTSFLETLKTERLSPDLL 146
S + + G T L P ST T P++ GST L PD
Sbjct: 4385 QESTASHSSPGSTDTTLSPGST---TASSLGPESTTFHSSPGSTE-------TTLLPDNT 4434
Query: 147 TLGPALPSSLPVPNSAYGGPDFSSTFFSPTGSPLN---SAAYSS-PKLRGTLPLPPCEAR 202
T L +S PV +S+ G P T SP GS S + S P + T P PP
Sbjct: 4435 TASGLLEASTPV-HSSTGSPH---TTLSPAGSTTRQGESTTFQSWPNSKDTTPAPPTTTS 4490
Query: 203 ECVNCGATA 211
V T+
Sbjct: 4491 AFVELSTTS 4499
>gi|31542493 D site of albumin promoter (albumin D-box) binding
protein [Homo sapiens]
Length = 325
Score = 33.5 bits (75), Expect = 0.36
Identities = 38/138 (27%), Positives = 51/138 (36%), Gaps = 9/138 (6%)
Query: 283 GLYYKLHQVNRPLTMRKDGIQTRNRKASGKGKKKRGSSLGGTGAAEGPAGGFMVVAGGSG 342
GL L ++P ++ + RKA+ G L G A+ PAG VV GGS
Sbjct: 30 GLRSLLQGTSKPKEPASCLLKEKERKAALPAATTPGPGLETAGPADAPAGA--VVGGGSP 87
Query: 343 SGNCGEVASGLTLGP-------PGTAHLYQGLGPVVLSGPVSHLMPFPGPLLGSPTGSFP 395
G G V + L P P Y L +L + P PG P+ +
Sbjct: 88 RGRPGPVPAPGLLAPLLWERTLPFGDVEYVDLDAFLLEHGLPPSPPPPGGPSPEPSPART 147
Query: 396 TGPMPPTTSTTVVAPLSS 413
P P S +P SS
Sbjct: 148 PAPSPGPGSCGSASPRSS 165
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.133 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,895,718
Number of Sequences: 37866
Number of extensions: 1280473
Number of successful extensions: 5853
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 223
Number of HSP's that attempted gapping in prelim test: 5197
Number of HSP's gapped (non-prelim): 814
length of query: 413
length of database: 18,247,518
effective HSP length: 105
effective length of query: 308
effective length of database: 14,271,588
effective search space: 4395649104
effective search space used: 4395649104
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.