HOXC13 23923

Name: HOXC13	Sequence: fasta or formatted (330aa)		NCBI GI: 24497536
Description: homeobox C13		Referenced in: HOX Genes
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.5 28 2 C cysteine 2.1 7 1 D aspartate 3.3 11 2 E glutamate 4.8 16 1 F phenylalanine 2.1 7 1 G glycine 11.2 37 10 H histidine 3.3 11 1 I isoleucine 2.1 7 1 K lysine 5.8 19 2 L leucine 7.0 23 3 M methionine 1.2 4 1 N asparagine 1.5 5 1 P proline 10.9 36 3 Q glutamine 3.9 13 2 R arginine 5.2 17 3 S serine 11.2 37 3 T threonine 3.6 12 2 V valine 5.5 18 2 W tryptophan 1.5 5 1 Y tyrosine 5.2 17 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 homeobox C13 HOXA13 0.381 homeobox A13 HOXD13 0.357 homeobox D13 HOXB13 0.318 homeobox B13 HOXA10 0.107 homeobox A10 isoform a HOXD11 0.101 homeobox D11 HOXD9 0.096 homeobox D9 HOXA11 0.087 homeobox A11 HOXD12 0.085 homeobox D12 HOXC11 0.082 homeobox C11 HOXC12 0.081 homeobox C12 HOXC10 0.079 homeobox C10 HOXA4 0.078 homeobox A4 HOXD10 0.078 homeobox D10 HOXB9 0.075 homeobox B9 HOXA10 0.073 homeobox A10 isoform b HOXA9 0.072 homeobox A9 HOXC9 0.072 homeobox C9 CDX4 0.069 caudal type homeobox 4 EN2 0.067 engrailed homeobox 2 PDX1 0.066 pancreatic and duodenal homeobox 1 MEOX1 0.066 mesenchyme homeobox 1 isoform 3 MEOX1 0.066 mesenchyme homeobox 1 isoform 1 GBX1 0.064 gastrulation brain homeo box 1 CDX2 0.064 caudal type homeobox 2 HOXD4 0.063 homeobox D4 HOXA5 0.063 homeobox A5 HOXC8 0.063 homeobox C8 HOXC5 0.061 homeobox C5 CDX1 0.061 caudal type homeobox 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.