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Search of human proteins with 4503047
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4503047 cysteine-rich protein 1 (intestinal) [Homo sapiens]
(77 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4503047 cysteine-rich protein 1 (intestinal) [Homo sapiens] 180 3e-46
gi|4503049 cysteine-rich protein 2 [Homo sapiens] 129 5e-31
gi|116517305 cysteine-rich protein 3 [Homo sapiens] 111 1e-25
gi|4758086 cysteine and glycine-rich protein 1 isoform 1 [Homo s... 82 1e-16
gi|4503101 cysteine and glycine-rich protein 2 [Homo sapiens] 80 4e-16
gi|189083753 cysteine and glycine-rich protein 3 [Homo sapiens] 78 2e-15
gi|4502893 cysteine and glycine-rich protein 3 [Homo sapiens] 78 2e-15
gi|221316627 cysteine and glycine-rich protein 1 isoform 2 [Homo... 62 1e-10
gi|5453710 LIM and SH3 protein 1 [Homo sapiens] 59 8e-10
gi|47087157 nebulette non-muscle isoform [Homo sapiens] 58 2e-09
gi|51173715 actin-binding LIM protein 1 isoform c [Homo sapiens] 53 5e-08
gi|51173713 actin-binding LIM protein 1 isoform b [Homo sapiens] 53 5e-08
gi|51173711 actin-binding LIM protein 1 isoform a [Homo sapiens] 53 5e-08
gi|170172518 microtubule associated monoxygenase, calponin and L... 52 1e-07
gi|209862793 microtubule associated monoxygenase, calponin and L... 52 1e-07
gi|209862789 microtubule associated monoxygenase, calponin and L... 52 1e-07
gi|46049092 nebulin-related anchoring protein isoform C [Homo sa... 50 3e-07
gi|46049105 nebulin-related anchoring protein isoform S [Homo sa... 50 3e-07
gi|7662330 actin binding LIM protein family, member 3 [Homo sapi... 49 9e-07
gi|109638745 transforming growth factor beta 1 induced transcrip... 48 2e-06
gi|21361591 transforming growth factor beta 1 induced transcript... 48 2e-06
gi|197383100 PDZ and LIM domain 5 isoform b [Homo sapiens] 47 4e-06
gi|197383077 PDZ and LIM domain 5 isoform a [Homo sapiens] 47 4e-06
gi|194272207 actin binding LIM protein family, member 2 isoform ... 47 4e-06
gi|153792514 actin binding LIM protein family, member 2 isoform ... 47 4e-06
gi|194272204 actin binding LIM protein family, member 2 isoform ... 47 4e-06
gi|194272202 actin binding LIM protein family, member 2 isoform ... 47 4e-06
gi|194272200 actin binding LIM protein family, member 2 isoform ... 47 4e-06
gi|194272198 actin binding LIM protein family, member 2 isoform ... 47 4e-06
gi|194272196 actin binding LIM protein family, member 2 isoform ... 47 4e-06
>gi|4503047 cysteine-rich protein 1 (intestinal) [Homo sapiens]
Length = 77
Score = 180 bits (456), Expect = 3e-46
Identities = 77/77 (100%), Positives = 77/77 (100%)
Query: 1 MPKCPKCNKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPCYAAM 60
MPKCPKCNKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPCYAAM
Sbjct: 1 MPKCPKCNKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPCYAAM 60
Query: 61 FGPKGFGRGGAESHTFK 77
FGPKGFGRGGAESHTFK
Sbjct: 61 FGPKGFGRGGAESHTFK 77
>gi|4503049 cysteine-rich protein 2 [Homo sapiens]
Length = 208
Score = 129 bits (324), Expect = 5e-31
Identities = 50/73 (68%), Positives = 62/73 (84%)
Query: 4 CPKCNKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPCYAAMFGP 63
CP+C+K+VYFAE+VTSLGKDWHRPCL+CE+CGKTLT GGHAEH+G+PYC+ PCY +FGP
Sbjct: 126 CPRCSKKVYFAEKVTSLGKDWHRPCLRCERCGKTLTPGGHAEHDGQPYCHKPCYGILFGP 185
Query: 64 KGFGRGGAESHTF 76
KG G S+ +
Sbjct: 186 KGVNTGAVGSYIY 198
Score = 129 bits (323), Expect = 7e-31
Identities = 52/75 (69%), Positives = 64/75 (85%)
Query: 3 KCPKCNKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPCYAAMFG 62
KCPKC+K VYFAE+V+SLGKDWH+ CLKCE+C KTLT GGHAEH+GKP+C+ PCYA +FG
Sbjct: 4 KCPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYATLFG 63
Query: 63 PKGFGRGGAESHTFK 77
PKG GGA S+ ++
Sbjct: 64 PKGVNIGGAGSYIYE 78
>gi|116517305 cysteine-rich protein 3 [Homo sapiens]
Length = 204
Score = 111 bits (278), Expect = 1e-25
Identities = 43/73 (58%), Positives = 57/73 (78%)
Query: 4 CPKCNKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPCYAAMFGP 63
CP+C + V+FAE+V+SLGK+WHR CLKCE+C L+ GGHAEH G+PYC+ PCY A+FGP
Sbjct: 5 CPRCQQPVFFAEKVSSLGKNWHRFCLKCERCHSILSPGGHAEHNGRPYCHKPCYGALFGP 64
Query: 64 KGFGRGGAESHTF 76
+G GG S+ +
Sbjct: 65 RGVNIGGVGSYLY 77
Score = 108 bits (270), Expect = 9e-25
Identities = 42/66 (63%), Positives = 53/66 (80%)
Query: 4 CPKCNKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPCYAAMFGP 63
CP C + VYFAE+V SLG++WHRPCL+C++C KTLT+G HAEH+G PYC+ PCY +FGP
Sbjct: 124 CPGCGEPVYFAEKVMSLGRNWHRPCLRCQRCHKTLTAGSHAEHDGVPYCHVPCYGYLFGP 183
Query: 64 KGFGRG 69
KG G
Sbjct: 184 KGVNIG 189
>gi|4758086 cysteine and glycine-rich protein 1 isoform 1 [Homo
sapiens]
Length = 193
Score = 81.6 bits (200), Expect = 1e-16
Identities = 35/67 (52%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Query: 3 KCPKCNKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPCYAAMFG 62
+CP+C++ VY AE+V GK WH+ C +C KCGK L S A+ +G+ YC CYA FG
Sbjct: 118 RCPRCSQAVYAAEKVIGAGKSWHKACFRCAKCGKGLESTTLADKDGEIYCK-GCYAKNFG 176
Query: 63 PKGFGRG 69
PKGFG G
Sbjct: 177 PKGFGFG 183
Score = 62.0 bits (149), Expect = 1e-10
Identities = 30/67 (44%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 3 KCPKCNKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPCYAAMFG 62
KC C K VYFAE V G +H+ C C C K L S A H + YC CY +G
Sbjct: 9 KCGVCQKTVYFAEEVQCEGNSFHKSCFLCMVCKKNLDSTTVAVHGEEIYCK-SCYGKKYG 67
Query: 63 PKGFGRG 69
PKG+G G
Sbjct: 68 PKGYGYG 74
>gi|4503101 cysteine and glycine-rich protein 2 [Homo sapiens]
Length = 193
Score = 80.1 bits (196), Expect = 4e-16
Identities = 35/67 (52%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 3 KCPKCNKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPCYAAMFG 62
KC +C VY AE++ GK WH+ C +C KCGK+L S E EG+ YC CYA FG
Sbjct: 118 KCSRCGDSVYAAEKIIGAGKPWHKNCFRCAKCGKSLESTTLTEKEGEIYCK-GCYAKNFG 176
Query: 63 PKGFGRG 69
PKGFG G
Sbjct: 177 PKGFGYG 183
Score = 60.5 bits (145), Expect = 3e-10
Identities = 29/67 (43%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 3 KCPKCNKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPCYAAMFG 62
KC C + VY AE V G+ +HR C C C K L S A H+ + YC CY +G
Sbjct: 9 KCGACGRTVYHAEEVQCDGRSFHRCCFLCMVCRKNLDSTTVAIHDEEIYCK-SCYGKKYG 67
Query: 63 PKGFGRG 69
PKG+G G
Sbjct: 68 PKGYGYG 74
>gi|189083753 cysteine and glycine-rich protein 3 [Homo sapiens]
Length = 194
Score = 77.8 bits (190), Expect = 2e-15
Identities = 34/68 (50%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 3 KCPKCNKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPCYAAMFG 62
KCP+C K VY AE+V GK WH+ C +C CGK+L S + +G+ YC CYA FG
Sbjct: 119 KCPRCGKSVYAAEKVMGGGKPWHKTCFRCAICGKSLESTNVTDKDGELYCK-VCYAKNFG 177
Query: 63 PKGFGRGG 70
P G G GG
Sbjct: 178 PTGIGFGG 185
Score = 63.2 bits (152), Expect = 4e-11
Identities = 29/67 (43%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 3 KCPKCNKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPCYAAMFG 62
KC C K VY AE + G+ +H+ C C C K L S A HE + YC CY +G
Sbjct: 9 KCGACEKTVYHAEEIQCNGRSFHKTCFHCMACRKALDSTTVAAHESEIYCK-VCYGRRYG 67
Query: 63 PKGFGRG 69
PKG G G
Sbjct: 68 PKGIGYG 74
>gi|4502893 cysteine and glycine-rich protein 3 [Homo sapiens]
Length = 194
Score = 77.8 bits (190), Expect = 2e-15
Identities = 34/68 (50%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 3 KCPKCNKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPCYAAMFG 62
KCP+C K VY AE+V GK WH+ C +C CGK+L S + +G+ YC CYA FG
Sbjct: 119 KCPRCGKSVYAAEKVMGGGKPWHKTCFRCAICGKSLESTNVTDKDGELYCK-VCYAKNFG 177
Query: 63 PKGFGRGG 70
P G G GG
Sbjct: 178 PTGIGFGG 185
Score = 63.2 bits (152), Expect = 4e-11
Identities = 29/67 (43%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 3 KCPKCNKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPCYAAMFG 62
KC C K VY AE + G+ +H+ C C C K L S A HE + YC CY +G
Sbjct: 9 KCGACEKTVYHAEEIQCNGRSFHKTCFHCMACRKALDSTTVAAHESEIYCK-VCYGRRYG 67
Query: 63 PKGFGRG 69
PKG G G
Sbjct: 68 PKGIGYG 74
>gi|221316627 cysteine and glycine-rich protein 1 isoform 2 [Homo
sapiens]
Length = 140
Score = 62.0 bits (149), Expect = 1e-10
Identities = 30/67 (44%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 3 KCPKCNKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPCYAAMFG 62
KC C K VYFAE V G +H+ C C C K L S A H + YC CY +G
Sbjct: 9 KCGVCQKTVYFAEEVQCEGNSFHKSCFLCMVCKKNLDSTTVAVHGEEIYCK-SCYGKKYG 67
Query: 63 PKGFGRG 69
PKG+G G
Sbjct: 68 PKGYGYG 74
Score = 28.9 bits (63), Expect = 0.93
Identities = 10/20 (50%), Positives = 15/20 (75%)
Query: 3 KCPKCNKEVYFAERVTSLGK 22
+CP+C++ VY AE+V GK
Sbjct: 118 RCPRCSQAVYAAEKVIGAGK 137
>gi|5453710 LIM and SH3 protein 1 [Homo sapiens]
Length = 261
Score = 58.9 bits (141), Expect = 8e-10
Identities = 24/52 (46%), Positives = 29/52 (55%)
Query: 2 PKCPKCNKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCN 53
P C +C K VY E+V L K WH+ C CE C TL + +E KPYCN
Sbjct: 3 PNCARCGKIVYPTEKVNCLDKFWHKACFHCETCKMTLNMKNYKGYEKKPYCN 54
>gi|47087157 nebulette non-muscle isoform [Homo sapiens]
Length = 270
Score = 57.8 bits (138), Expect = 2e-09
Identities = 23/52 (44%), Positives = 29/52 (55%)
Query: 2 PKCPKCNKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCN 53
P+C +C K VY E+V L K WH+ C CE C L + +E KPYCN
Sbjct: 3 PQCARCGKVVYPTEKVNCLDKYWHKGCFHCEVCKMALNMNNYKGYEKKPYCN 54
>gi|51173715 actin-binding LIM protein 1 isoform c [Homo sapiens]
Length = 746
Score = 53.1 bits (126), Expect = 5e-08
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 4 CPKCNKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPCYAAMFGP 63
C C +++ + + +L K WH C KC+ CGK LT G + +G PYC Y +FG
Sbjct: 166 CAGCGRDIKNGQALLALDKQWHLGCFKCKSCGKVLT-GEYISKDGAPYCEKD-YQGLFGV 223
Query: 64 K 64
K
Sbjct: 224 K 224
Score = 31.2 bits (69), Expect = 0.19
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 2/66 (3%)
Query: 4 CPKCNKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPCYAAMFGP 63
C KC E E + K +H C C+ CG L GG G+ C Y M+G
Sbjct: 39 CHKCG-EPCKGEVLRVQTKHFHIKCFTCKVCGCDLAQGGFFIKNGEYLCTLD-YQRMYGT 96
Query: 64 KGFGRG 69
+ G G
Sbjct: 97 RCHGCG 102
Score = 29.3 bits (64), Expect = 0.71
Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
Query: 3 KCPKCNKEVYFAERVTSLG-KDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPC 56
KC C++ + +V G K +H C +C +C + T G +G + C
Sbjct: 224 KCEACHQ--FITGKVLEAGDKHYHPSCARCSRCNQMFTEGEEMYLQGSTVWHPDC 276
>gi|51173713 actin-binding LIM protein 1 isoform b [Homo sapiens]
Length = 718
Score = 53.1 bits (126), Expect = 5e-08
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 4 CPKCNKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPCYAAMFGP 63
C C +++ + + +L K WH C KC+ CGK LT G + +G PYC Y +FG
Sbjct: 166 CAGCGRDIKNGQALLALDKQWHLGCFKCKSCGKVLT-GEYISKDGAPYCEKD-YQGLFGV 223
Query: 64 K 64
K
Sbjct: 224 K 224
Score = 31.2 bits (69), Expect = 0.19
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 2/66 (3%)
Query: 4 CPKCNKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPCYAAMFGP 63
C KC E E + K +H C C+ CG L GG G+ C Y M+G
Sbjct: 39 CHKCG-EPCKGEVLRVQTKHFHIKCFTCKVCGCDLAQGGFFIKNGEYLCTLD-YQRMYGT 96
Query: 64 KGFGRG 69
+ G G
Sbjct: 97 RCHGCG 102
Score = 29.3 bits (64), Expect = 0.71
Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
Query: 3 KCPKCNKEVYFAERVTSLG-KDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPC 56
KC C++ + +V G K +H C +C +C + T G +G + C
Sbjct: 224 KCEACHQ--FITGKVLEAGDKHYHPSCARCSRCNQMFTEGEEMYLQGSTVWHPDC 276
>gi|51173711 actin-binding LIM protein 1 isoform a [Homo sapiens]
Length = 778
Score = 53.1 bits (126), Expect = 5e-08
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 4 CPKCNKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPCYAAMFGP 63
C C +++ + + +L K WH C KC+ CGK LT G + +G PYC Y +FG
Sbjct: 226 CAGCGRDIKNGQALLALDKQWHLGCFKCKSCGKVLT-GEYISKDGAPYCEKD-YQGLFGV 283
Query: 64 K 64
K
Sbjct: 284 K 284
Score = 31.2 bits (69), Expect = 0.19
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 2/66 (3%)
Query: 4 CPKCNKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPCYAAMFGP 63
C KC E E + K +H C C+ CG L GG G+ C Y M+G
Sbjct: 99 CHKCG-EPCKGEVLRVQTKHFHIKCFTCKVCGCDLAQGGFFIKNGEYLCTLD-YQRMYGT 156
Query: 64 KGFGRG 69
+ G G
Sbjct: 157 RCHGCG 162
Score = 29.3 bits (64), Expect = 0.71
Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
Query: 3 KCPKCNKEVYFAERVTSLG-KDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPC 56
KC C++ + +V G K +H C +C +C + T G +G + C
Sbjct: 284 KCEACHQ--FITGKVLEAGDKHYHPSCARCSRCNQMFTEGEEMYLQGSTVWHPDC 336
>gi|170172518 microtubule associated monoxygenase, calponin and LIM
domain containing 3 isoform 3 [Homo sapiens]
Length = 966
Score = 51.6 bits (122), Expect = 1e-07
Identities = 26/57 (45%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 4 CPKCNKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGGHAE--HEGKPYCN-HPCY 57
C C K VY ER+++ GK +HR C KCE C TL +A +GK YC H CY
Sbjct: 764 CYFCQKRVYVMERLSAEGKFFHRSCFKCEYCATTLRLSAYAYDIEDGKFYCKPHYCY 820
>gi|209862793 microtubule associated monoxygenase, calponin and LIM
domain containing 3 isoform 2 [Homo sapiens]
Length = 1073
Score = 51.6 bits (122), Expect = 1e-07
Identities = 26/57 (45%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 4 CPKCNKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGGHAE--HEGKPYCN-HPCY 57
C C K VY ER+++ GK +HR C KCE C TL +A +GK YC H CY
Sbjct: 888 CYFCQKRVYVMERLSAEGKFFHRSCFKCEYCATTLRLSAYAYDIEDGKFYCKPHYCY 944
>gi|209862789 microtubule associated monoxygenase, calponin and LIM
domain containing 3 isoform 1 [Homo sapiens]
Length = 2002
Score = 51.6 bits (122), Expect = 1e-07
Identities = 26/57 (45%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 4 CPKCNKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGGHAE--HEGKPYCN-HPCY 57
C C K VY ER+++ GK +HR C KCE C TL +A +GK YC H CY
Sbjct: 764 CYFCQKRVYVMERLSAEGKFFHRSCFKCEYCATTLRLSAYAYDIEDGKFYCKPHYCY 820
>gi|46049092 nebulin-related anchoring protein isoform C [Homo
sapiens]
Length = 1695
Score = 50.4 bits (119), Expect = 3e-07
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 4 CPKCNKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCN 53
C +C VY AE+++ + + WH+ C CE C L+ H+ KPYC+
Sbjct: 6 CSRCGYGVYPAEKISCIDQIWHKACFHCEVCKMMLSVNNFVSHQKKPYCH 55
>gi|46049105 nebulin-related anchoring protein isoform S [Homo
sapiens]
Length = 1730
Score = 50.4 bits (119), Expect = 3e-07
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 4 CPKCNKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCN 53
C +C VY AE+++ + + WH+ C CE C L+ H+ KPYC+
Sbjct: 6 CSRCGYGVYPAEKISCIDQIWHKACFHCEVCKMMLSVNNFVSHQKKPYCH 55
>gi|7662330 actin binding LIM protein family, member 3 [Homo
sapiens]
Length = 683
Score = 48.9 bits (115), Expect = 9e-07
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 4 CPKCNKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPCYAAMFGP 63
C C +E+ + + +L K WH C KC+ C LT G + +G PYC Y A FG
Sbjct: 151 CAGCKEEIKHGQSLLALDKQWHVSCFKCQTCSVILT-GEYISKDGVPYCESD-YHAQFGI 208
Query: 64 K 64
K
Sbjct: 209 K 209
Score = 32.7 bits (73), Expect = 0.065
Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
Query: 3 KCPKCNKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPCYAAMFG 62
+C C ++ E +++LG+ +H C C C K G GK C +M
Sbjct: 81 RCDSC-RDFITGEVISALGRTYHPKCFVCSLCRKPFPIGDKVTFSGKECVCQTCSQSMAS 139
Query: 63 PK 64
K
Sbjct: 140 SK 141
>gi|109638745 transforming growth factor beta 1 induced transcript 1
isoform 1 [Homo sapiens]
Length = 461
Score = 47.8 bits (112), Expect = 2e-06
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 2 PKCPKCNKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPCYAAMF 61
P+C CN+ + + VT+LG WH C CG+ G E EG+PYC + +F
Sbjct: 285 PRCGFCNQPIRH-KMVTALGTHWHPEHFCCVSCGEPFGDEGFHEREGRPYCRRD-FLQLF 342
Query: 62 GPKGFGRGG 70
P+ G G
Sbjct: 343 APRCQGCQG 351
Score = 43.1 bits (100), Expect = 5e-05
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Query: 4 CPKCNKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPCYAAMFGP 63
C CNK + + VT+LG+ WH C C L E +G P+C CY F P
Sbjct: 228 CGSCNKPIA-GQVVTALGRAWHPEHFVCGGCSTALGGSSFFEKDGAPFCPE-CYFERFSP 285
Query: 64 K 64
+
Sbjct: 286 R 286
Score = 42.7 bits (99), Expect = 6e-05
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 17 VTSLGKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPCYAAMFG 62
V++LG+ +H C C + LT G E GKPYC PC+ +FG
Sbjct: 417 VSALGRRFHPDHFTCTFCLRPLTKGSFQERAGKPYC-QPCFLKLFG 461
Score = 42.0 bits (97), Expect = 1e-04
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 2 PKCPKCNKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPCYA 58
P+C C + +++L WH C C +C + G EHEG+P C + +A
Sbjct: 344 PRCQGCQGPI-LDNYISALSALWHPDCFVCRECFAPFSGGSFFEHEGRPLCENHFHA 399
>gi|21361591 transforming growth factor beta 1 induced transcript 1
isoform 2 [Homo sapiens]
Length = 444
Score = 47.8 bits (112), Expect = 2e-06
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 2 PKCPKCNKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPCYAAMF 61
P+C CN+ + + VT+LG WH C CG+ G E EG+PYC + +F
Sbjct: 268 PRCGFCNQPIRH-KMVTALGTHWHPEHFCCVSCGEPFGDEGFHEREGRPYCRRD-FLQLF 325
Query: 62 GPKGFGRGG 70
P+ G G
Sbjct: 326 APRCQGCQG 334
Score = 43.1 bits (100), Expect = 5e-05
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Query: 4 CPKCNKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPCYAAMFGP 63
C CNK + + VT+LG+ WH C C L E +G P+C CY F P
Sbjct: 211 CGSCNKPIA-GQVVTALGRAWHPEHFVCGGCSTALGGSSFFEKDGAPFCPE-CYFERFSP 268
Query: 64 K 64
+
Sbjct: 269 R 269
Score = 42.7 bits (99), Expect = 6e-05
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 17 VTSLGKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPCYAAMFG 62
V++LG+ +H C C + LT G E GKPYC PC+ +FG
Sbjct: 400 VSALGRRFHPDHFTCTFCLRPLTKGSFQERAGKPYC-QPCFLKLFG 444
Score = 42.0 bits (97), Expect = 1e-04
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 2 PKCPKCNKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPCYA 58
P+C C + +++L WH C C +C + G EHEG+P C + +A
Sbjct: 327 PRCQGCQGPI-LDNYISALSALWHPDCFVCRECFAPFSGGSFFEHEGRPLCENHFHA 382
>gi|197383100 PDZ and LIM domain 5 isoform b [Homo sapiens]
Length = 487
Score = 46.6 bits (109), Expect = 4e-06
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 2 PKCPKCNKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPCYAAMF 61
P+C +C +++ E +++L + WH C C CGK + + +G+PYC Y A+F
Sbjct: 368 PECGRCQRKI-LGEVISALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETD-YYALF 425
Query: 62 G 62
G
Sbjct: 426 G 426
Score = 43.1 bits (100), Expect = 5e-05
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Query: 2 PKCPKCNKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPCYAAMF 61
P C CN +V + +LGK WH C C T+ G E +G YC CY F
Sbjct: 309 PMCAHCN-QVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYC-ELCYEKFF 366
Query: 62 GPK 64
P+
Sbjct: 367 APE 369
Score = 29.6 bits (65), Expect = 0.55
Identities = 12/43 (27%), Positives = 18/43 (41%)
Query: 19 SLGKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPCYAAMF 61
+LG WH C C C ++L + KP C ++ F
Sbjct: 445 ALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPLCKKHAHSVNF 487
>gi|197383077 PDZ and LIM domain 5 isoform a [Homo sapiens]
Length = 596
Score = 46.6 bits (109), Expect = 4e-06
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 2 PKCPKCNKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPCYAAMF 61
P+C +C +++ E +++L + WH C C CGK + + +G+PYC Y A+F
Sbjct: 477 PECGRCQRKI-LGEVISALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETD-YYALF 534
Query: 62 G 62
G
Sbjct: 535 G 535
Score = 43.1 bits (100), Expect = 5e-05
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Query: 2 PKCPKCNKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPCYAAMF 61
P C CN +V + +LGK WH C C T+ G E +G YC CY F
Sbjct: 418 PMCAHCN-QVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYC-ELCYEKFF 475
Query: 62 GPK 64
P+
Sbjct: 476 APE 478
Score = 29.6 bits (65), Expect = 0.55
Identities = 12/43 (27%), Positives = 18/43 (41%)
Query: 19 SLGKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPCYAAMF 61
+LG WH C C C ++L + KP C ++ F
Sbjct: 554 ALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPLCKKHAHSVNF 596
>gi|194272207 actin binding LIM protein family, member 2 isoform 7
[Homo sapiens]
Length = 470
Score = 46.6 bits (109), Expect = 4e-06
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 4 CPKCNKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPCYAAMFG 62
C C E+ + + +L K WH C KC+ CGK L + + +G PYC Y A FG
Sbjct: 153 CGGCGTEIKNGQALVALDKHWHLGCFKCKSCGK-LLNAEYISKDGLPYCEAD-YHAKFG 209
Score = 28.9 bits (63), Expect = 0.93
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 22 KDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPCYAAMFGPKGF 66
K +H C C+ CG L GG +G+ C Y ++G + F
Sbjct: 41 KYFHIKCFVCKACGCDLAEGGFFVRQGEYICTLD-YQRLYGTRCF 84
Score = 28.9 bits (63), Expect = 0.93
Identities = 15/54 (27%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Query: 3 KCPKCNKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPC 56
+C C++ + E V++LGK +H C C C G GK C
Sbjct: 82 RCFSCDQFIE-GEVVSALGKTYHPDCFVCAVCRLPFPPGDRVTFNGKECMCQKC 134
>gi|153792514 actin binding LIM protein family, member 2 isoform 6
[Homo sapiens]
Length = 521
Score = 46.6 bits (109), Expect = 4e-06
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 4 CPKCNKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPCYAAMFG 62
C C E+ + + +L K WH C KC+ CGK L + + +G PYC Y A FG
Sbjct: 153 CGGCGTEIKNGQALVALDKHWHLGCFKCKSCGK-LLNAEYISKDGLPYCEAD-YHAKFG 209
Score = 28.9 bits (63), Expect = 0.93
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 22 KDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPCYAAMFGPKGF 66
K +H C C+ CG L GG +G+ C Y ++G + F
Sbjct: 41 KYFHIKCFVCKACGCDLAEGGFFVRQGEYICTLD-YQRLYGTRCF 84
Score = 28.9 bits (63), Expect = 0.93
Identities = 15/54 (27%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Query: 3 KCPKCNKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPC 56
+C C++ + E V++LGK +H C C C G GK C
Sbjct: 82 RCFSCDQFIE-GEVVSALGKTYHPDCFVCAVCRLPFPPGDRVTFNGKECMCQKC 134
>gi|194272204 actin binding LIM protein family, member 2 isoform 5
[Homo sapiens]
Length = 531
Score = 46.6 bits (109), Expect = 4e-06
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 4 CPKCNKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPCYAAMFG 62
C C E+ + + +L K WH C KC+ CGK L + + +G PYC Y A FG
Sbjct: 153 CGGCGTEIKNGQALVALDKHWHLGCFKCKSCGK-LLNAEYISKDGLPYCEAD-YHAKFG 209
Score = 28.9 bits (63), Expect = 0.93
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 22 KDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPCYAAMFGPKGF 66
K +H C C+ CG L GG +G+ C Y ++G + F
Sbjct: 41 KYFHIKCFVCKACGCDLAEGGFFVRQGEYICTLD-YQRLYGTRCF 84
Score = 28.9 bits (63), Expect = 0.93
Identities = 15/54 (27%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Query: 3 KCPKCNKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPC 56
+C C++ + E V++LGK +H C C C G GK C
Sbjct: 82 RCFSCDQFIE-GEVVSALGKTYHPDCFVCAVCRLPFPPGDRVTFNGKECMCQKC 134
>gi|194272202 actin binding LIM protein family, member 2 isoform 4
[Homo sapiens]
Length = 559
Score = 46.6 bits (109), Expect = 4e-06
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 4 CPKCNKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPCYAAMFG 62
C C E+ + + +L K WH C KC+ CGK L + + +G PYC Y A FG
Sbjct: 153 CGGCGTEIKNGQALVALDKHWHLGCFKCKSCGK-LLNAEYISKDGLPYCEAD-YHAKFG 209
Score = 28.9 bits (63), Expect = 0.93
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 22 KDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPCYAAMFGPKGF 66
K +H C C+ CG L GG +G+ C Y ++G + F
Sbjct: 41 KYFHIKCFVCKACGCDLAEGGFFVRQGEYICTLD-YQRLYGTRCF 84
Score = 28.9 bits (63), Expect = 0.93
Identities = 15/54 (27%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Query: 3 KCPKCNKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPC 56
+C C++ + E V++LGK +H C C C G GK C
Sbjct: 82 RCFSCDQFIE-GEVVSALGKTYHPDCFVCAVCRLPFPPGDRVTFNGKECMCQKC 134
>gi|194272200 actin binding LIM protein family, member 2 isoform 3
[Homo sapiens]
Length = 572
Score = 46.6 bits (109), Expect = 4e-06
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 4 CPKCNKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPCYAAMFG 62
C C E+ + + +L K WH C KC+ CGK L + + +G PYC Y A FG
Sbjct: 153 CGGCGTEIKNGQALVALDKHWHLGCFKCKSCGK-LLNAEYISKDGLPYCEAD-YHAKFG 209
Score = 28.9 bits (63), Expect = 0.93
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 22 KDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPCYAAMFGPKGF 66
K +H C C+ CG L GG +G+ C Y ++G + F
Sbjct: 41 KYFHIKCFVCKACGCDLAEGGFFVRQGEYICTLD-YQRLYGTRCF 84
Score = 28.9 bits (63), Expect = 0.93
Identities = 15/54 (27%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Query: 3 KCPKCNKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPC 56
+C C++ + E V++LGK +H C C C G GK C
Sbjct: 82 RCFSCDQFIE-GEVVSALGKTYHPDCFVCAVCRLPFPPGDRVTFNGKECMCQKC 134
>gi|194272198 actin binding LIM protein family, member 2 isoform 2
[Homo sapiens]
Length = 611
Score = 46.6 bits (109), Expect = 4e-06
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 4 CPKCNKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPCYAAMFG 62
C C E+ + + +L K WH C KC+ CGK L + + +G PYC Y A FG
Sbjct: 153 CGGCGTEIKNGQALVALDKHWHLGCFKCKSCGK-LLNAEYISKDGLPYCEAD-YHAKFG 209
Score = 28.9 bits (63), Expect = 0.93
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 22 KDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPCYAAMFGPKGF 66
K +H C C+ CG L GG +G+ C Y ++G + F
Sbjct: 41 KYFHIKCFVCKACGCDLAEGGFFVRQGEYICTLD-YQRLYGTRCF 84
Score = 28.9 bits (63), Expect = 0.93
Identities = 15/54 (27%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Query: 3 KCPKCNKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPC 56
+C C++ + E V++LGK +H C C C G GK C
Sbjct: 82 RCFSCDQFIE-GEVVSALGKTYHPDCFVCAVCRLPFPPGDRVTFNGKECMCQKC 134
>gi|194272196 actin binding LIM protein family, member 2 isoform 1
[Homo sapiens]
Length = 645
Score = 46.6 bits (109), Expect = 4e-06
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 4 CPKCNKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPCYAAMFG 62
C C E+ + + +L K WH C KC+ CGK L + + +G PYC Y A FG
Sbjct: 153 CGGCGTEIKNGQALVALDKHWHLGCFKCKSCGK-LLNAEYISKDGLPYCEAD-YHAKFG 209
Score = 28.9 bits (63), Expect = 0.93
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 22 KDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPCYAAMFGPKGF 66
K +H C C+ CG L GG +G+ C Y ++G + F
Sbjct: 41 KYFHIKCFVCKACGCDLAEGGFFVRQGEYICTLD-YQRLYGTRCF 84
Score = 28.9 bits (63), Expect = 0.93
Identities = 15/54 (27%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Query: 3 KCPKCNKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPC 56
+C C++ + E V++LGK +H C C C G GK C
Sbjct: 82 RCFSCDQFIE-GEVVSALGKTYHPDCFVCAVCRLPFPPGDRVTFNGKECMCQKC 134
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.139 0.492
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,882,682
Number of Sequences: 37866
Number of extensions: 179814
Number of successful extensions: 2044
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 138
Number of HSP's successfully gapped in prelim test: 160
Number of HSP's that attempted gapping in prelim test: 1224
Number of HSP's gapped (non-prelim): 1001
length of query: 77
length of database: 18,247,518
effective HSP length: 49
effective length of query: 28
effective length of database: 16,392,084
effective search space: 458978352
effective search space used: 458978352
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.