Guide to the Human Genome
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Name: NRAP Sequence: fasta or formatted (1730aa) NCBI GI: 46049105
Description:

nebulin-related anchoring protein isoform S

Referenced in:

LIM Domain Proteins
Muscle

Other entries for this name:
alt prot [1695aa] nebulin-related anchoring protein isoform C
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.7        167           2
 C cysteine            1.0         17           1
 D aspartate           5.7         98           3
 E glutamate           6.6        115           2
 F phenylalanine       2.6         45           1
 G glycine             5.4         93           2
 H histidine           3.8         65           2
 I isoleucine          2.9         51           2
 K lysine              9.5        165           4
 L leucine             8.6        148           3
 M methionine          2.7         47           2
 N asparagine          3.6         63           2
 P proline             3.8         65           2
 Q glutamine           6.0        103           2
 R arginine            5.7         98           2
 S serine              7.6        131           2
 T threonine           4.3         74           2
 V valine              4.4         76           2
 W tryptophan          1.0         18           1
 Y tyrosine            5.3         91           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nebulin-related anchoring protein isoform S 
NRAP                  0.795   nebulin-related anchoring protein isoform C 
NEB                   0.336   nebulin 
LOC100134308          0.088   PREDICTED: similar to nebulin 
NEBL                  0.049   nebulette sarcomeric isoform 
LOC100133732          0.039   PREDICTED: similar to nebulin 
NEBL                  0.029   nebulette non-muscle isoform 
LASP1                 0.023   LIM and SH3 protein 1 
CRIP3                 0.008   cysteine-rich protein 3 
CRIP2                 0.008   cysteine-rich protein 2 
CSRP3                 0.007   cysteine and glycine-rich protein 3 
CSRP3                 0.007   cysteine and glycine-rich protein 3 
CRIP1                 0.007   cysteine-rich protein 1 (intestinal) 
CSRP2                 0.007   cysteine and glycine-rich protein 2 
CSRP1                 0.006   cysteine and glycine-rich protein 1 isoform 1 
LIMA1                 0.006   LIM domain and actin binding 1 isoform c 
LIMA1                 0.006   LIM domain and actin binding 1 isoform a 
LIMA1                 0.006   LIM domain and actin binding 1 isoform b 
XIRP2                 0.006   xin actin-binding repeat containing 2 isoform 2 [Ho...
ABLIM3                0.005   actin binding LIM protein family, member 3 
CSRP1                 0.005   cysteine and glycine-rich protein 1 isoform 2 [Homo...
LIMD2                 0.005   LIM domain containing 2 
FHL1                  0.005   four and a half LIM domains 1 isoform 2 
FHL1                  0.005   four and a half LIM domains 1 isoform 2 
FHL1                  0.005   four and a half LIM domains 1 isoform 3 
FHL1                  0.005   four and a half LIM domains 1 isoform 5 
FHL1                  0.005   four and a half LIM domains 1 isoform 2 
ABLIM2                0.005   actin binding LIM protein family, member 2 isoform ...
ABLIM2                0.005   actin binding LIM protein family, member 2 isoform ...
ABLIM2                0.005   actin binding LIM protein family, member 2 isoform ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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