CXCR5 28341

Name: CXCR5	Sequence: fasta or formatted (372aa)		NCBI GI: 4502415
Description: Burkitt lymphoma receptor 1 isoform 1		Referenced in: Chemokines and Their Receptors
Other entries for this name: alt prot [327aa] Burkitt lymphoma receptor 1 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.8 29 1 C cysteine 3.8 14 2 D aspartate 2.7 10 1 E glutamate 4.0 15 1 F phenylalanine 6.5 24 2 G glycine 4.6 17 1 H histidine 4.0 15 2 I isoleucine 4.3 16 1 K lysine 2.4 9 1 L leucine 16.4 61 3 M methionine 1.9 7 1 N asparagine 3.8 14 2 P proline 3.8 14 1 Q glutamine 2.4 9 1 R arginine 5.6 21 2 S serine 6.7 25 2 T threonine 6.2 23 2 V valine 8.6 32 2 W tryptophan 1.9 7 1 Y tyrosine 2.7 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 Burkitt lymphoma receptor 1 isoform 1 CXCR5 0.870 Burkitt lymphoma receptor 1 isoform 2 CXCR3 0.298 chemokine (C-X-C motif) receptor 3 isoform B CXCR3 0.298 chemokine (C-X-C motif) receptor 3 isoform A IL8RB 0.280 interleukin 8 receptor beta CCR7 0.275 chemokine (C-C motif) receptor 7 precursor IL8RA 0.257 interleukin 8 receptor alpha CXCR4 0.250 chemokine (C-X-C motif) receptor 4 isoform b CXCR4 0.250 chemokine (C-X-C motif) receptor 4 isoform a CCR9 0.242 chemokine (C-C motif) receptor 9 isoform B CCR9 0.242 chemokine (C-C motif) receptor 9 isoform A CCR6 0.222 chemokine (C-C motif) receptor 6 CCR6 0.222 chemokine (C-C motif) receptor 6 CCR8 0.218 chemokine (C-C motif) receptor 8 CCR4 0.218 chemokine (C-C motif) receptor 4 CCR2 0.209 chemokine (C-C motif) receptor 2 isoform B CCR2 0.209 chemokine (C-C motif) receptor 2 isoform A CCR5 0.208 chemokine (C-C motif) receptor 5 CCR5 0.208 chemokine (C-C motif) receptor 5 CCBP2 0.208 chemokine binding protein 2 CCR1 0.202 chemokine (C-C motif) receptor 1 CCR10 0.201 CC chemokine receptor 10 CCR3 0.198 CC chemokine receptor 3 CCR3 0.198 CC chemokine receptor 3 CX3CR1 0.196 chemokine (C-X3-C motif) receptor 1 CCRL1 0.194 chemokine (C-C motif) receptor-like 1 CCRL1 0.194 chemokine (C-C motif) receptor-like 1 XCR1 0.190 XC chemokine receptor 1 XCR1 0.190 XC chemokine receptor 1 CXCR6 0.182 G protein-coupled receptor TYMSTR Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.