Guide to the Human Genome
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Name: CCR8 Sequence: fasta or formatted (355aa) NCBI GI: 4885121
Description:

chemokine (C-C motif) receptor 8

Referenced in:

Chemokines and Their Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.9         14           1
 C cysteine            3.9         14           2
 D aspartate           3.4         12           1
 E glutamate           2.0          7           1
 F phenylalanine       7.9         28           2
 G glycine             3.1         11           1
 H histidine           2.5          9           1
 I isoleucine          7.3         26           2
 K lysine              4.8         17           2
 L leucine            13.8         49           3
 M methionine          2.8         10           1
 N asparagine          3.1         11           1
 P proline             2.3          8           1
 Q glutamine           4.5         16           2
 R arginine            2.5          9           1
 S serine              9.0         32           3
 T threonine           6.5         23           2
 V valine              9.6         34           2
 W tryptophan          1.1          4           1
 Y tyrosine            5.9         21           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   chemokine (C-C motif) receptor 8 
CCR4                  0.431   chemokine (C-C motif) receptor 4 
CCR2                  0.384   chemokine (C-C motif) receptor 2 isoform B 
CCR5                  0.381   chemokine (C-C motif) receptor 5 
CCR5                  0.381   chemokine (C-C motif) receptor 5 
CCR1                  0.375   chemokine (C-C motif) receptor 1 
CCR2                  0.369   chemokine (C-C motif) receptor 2 isoform A 
CX3CR1                0.352   chemokine (C-X3-C motif) receptor 1 
CCR3                  0.347   CC chemokine receptor 3 
CCR3                  0.347   CC chemokine receptor 3 
CCBP2                 0.291   chemokine binding protein 2 
XCR1                  0.276   XC chemokine receptor 1 
XCR1                  0.276   XC chemokine receptor 1 
CCR6                  0.272   chemokine (C-C motif) receptor 6 
CCR6                  0.272   chemokine (C-C motif) receptor 6 
IL8RB                 0.269   interleukin 8 receptor beta 
CXCR4                 0.259   chemokine (C-X-C motif) receptor 4 isoform b 
CXCR4                 0.259   chemokine (C-X-C motif) receptor 4 isoform a 
IL8RA                 0.258   interleukin 8 receptor alpha 
CCR9                  0.252   chemokine (C-C motif) receptor 9 isoform B 
CCR9                  0.252   chemokine (C-C motif) receptor 9 isoform A 
CCR7                  0.249   chemokine (C-C motif) receptor 7 precursor 
CCRL1                 0.232   chemokine (C-C motif) receptor-like 1 
CCRL1                 0.232   chemokine (C-C motif) receptor-like 1 
CXCR5                 0.230   Burkitt lymphoma receptor 1 isoform 1 
CCRL2                 0.230   chemokine (C-C motif) receptor-like 2 isoform 2 [Ho...
CCRL2                 0.230   chemokine (C-C motif) receptor-like 2 isoform 1 [Hom...
CXCR5                 0.229   Burkitt lymphoma receptor 1 isoform 2 
AGTR1                 0.217   angiotensin II receptor, type 1 
AGTR1                 0.217   angiotensin II receptor, type 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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