Guide to the Human Genome
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Name: CCR3 Sequence: fasta or formatted (355aa) NCBI GI: 30581170
Description:

CC chemokine receptor 3

Referenced in:

Chemokines and Their Receptors

Other entries for this name:
alt mRNA [355aa] CC chemokine receptor 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         19           2
 C cysteine            2.5          9           2
 D aspartate           2.5          9           2
 E glutamate           4.8         17           2
 F phenylalanine       7.6         27           2
 G glycine             4.2         15           1
 H histidine           3.7         13           1
 I isoleucine          7.9         28           2
 K lysine              3.1         11           3
 L leucine            14.4         51           2
 M methionine          3.1         11           1
 N asparagine          2.0          7           1
 P proline             3.7         13           2
 Q glutamine           0.6          2           1
 R arginine            5.4         19           2
 S serine              5.9         21           2
 T threonine           7.6         27           2
 V valine              8.7         31           4
 W tryptophan          1.4          5           1
 Y tyrosine            5.6         20           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   CC chemokine receptor 3 
CCR3                  1.000   CC chemokine receptor 3 
CCR1                  0.626   chemokine (C-C motif) receptor 1 
CCR2                  0.491   chemokine (C-C motif) receptor 2 isoform B 
CCR5                  0.489   chemokine (C-C motif) receptor 5 
CCR5                  0.489   chemokine (C-C motif) receptor 5 
CCR2                  0.457   chemokine (C-C motif) receptor 2 isoform A 
CCR4                  0.411   chemokine (C-C motif) receptor 4 
CCR8                  0.346   chemokine (C-C motif) receptor 8 
CX3CR1                0.345   chemokine (C-X3-C motif) receptor 1 
CCRL2                 0.329   chemokine (C-C motif) receptor-like 2 isoform 2 [Ho...
CCRL2                 0.329   chemokine (C-C motif) receptor-like 2 isoform 1 [Hom...
CCBP2                 0.284   chemokine binding protein 2 
CCR6                  0.280   chemokine (C-C motif) receptor 6 
CCR6                  0.280   chemokine (C-C motif) receptor 6 
CCR9                  0.277   chemokine (C-C motif) receptor 9 isoform B 
CCR9                  0.277   chemokine (C-C motif) receptor 9 isoform A 
CCR7                  0.264   chemokine (C-C motif) receptor 7 precursor 
XCR1                  0.248   XC chemokine receptor 1 
XCR1                  0.248   XC chemokine receptor 1 
CXCR4                 0.245   chemokine (C-X-C motif) receptor 4 isoform b 
CXCR4                 0.245   chemokine (C-X-C motif) receptor 4 isoform a 
IL8RB                 0.244   interleukin 8 receptor beta 
CXCR3                 0.237   chemokine (C-X-C motif) receptor 3 isoform B 
CXCR3                 0.237   chemokine (C-X-C motif) receptor 3 isoform A 
CXCR6                 0.235   G protein-coupled receptor TYMSTR 
IL8RA                 0.229   interleukin 8 receptor alpha 
CCRL1                 0.218   chemokine (C-C motif) receptor-like 1 
CCRL1                 0.218   chemokine (C-C motif) receptor-like 1 
AGTR1                 0.215   angiotensin II receptor, type 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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