Guide to the Human Genome
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Name: IL8RA Sequence: fasta or formatted (350aa) NCBI GI: 4504681
Description:

interleukin 8 receptor alpha

Referenced in:

Chemokines and Their Receptors
Interleukins and Their Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.3         22           2
 C cysteine            2.9         10           1
 D aspartate           3.4         12           2
 E glutamate           2.6          9           1
 F phenylalanine       6.9         24           2
 G glycine             4.9         17           1
 H histidine           2.9         10           1
 I isoleucine          5.7         20           2
 K lysine              3.1         11           1
 L leucine            16.3         57           3
 M methionine          3.4         12           1
 N asparagine          5.1         18           2
 P proline             3.4         12           2
 Q glutamine           2.0          7           1
 R arginine            5.1         18           2
 S serine              6.6         23           3
 T threonine           5.4         19           1
 V valine              8.6         30           2
 W tryptophan          1.7          6           1
 Y tyrosine            3.7         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   interleukin 8 receptor alpha 
IL8RB                 0.740   interleukin 8 receptor beta 
CCR6                  0.334   chemokine (C-C motif) receptor 6 
CCR6                  0.334   chemokine (C-C motif) receptor 6 
CXCR3                 0.305   chemokine (C-X-C motif) receptor 3 isoform B 
CXCR3                 0.305   chemokine (C-X-C motif) receptor 3 isoform A 
CCR4                  0.292   chemokine (C-C motif) receptor 4 
CCR9                  0.280   chemokine (C-C motif) receptor 9 isoform B 
CCR9                  0.280   chemokine (C-C motif) receptor 9 isoform A 
CXCR4                 0.279   chemokine (C-X-C motif) receptor 4 isoform b 
CXCR4                 0.279   chemokine (C-X-C motif) receptor 4 isoform a 
CXCR5                 0.276   Burkitt lymphoma receptor 1 isoform 1 
CXCR5                 0.276   Burkitt lymphoma receptor 1 isoform 2 
CCR7                  0.274   chemokine (C-C motif) receptor 7 precursor 
CCR8                  0.261   chemokine (C-C motif) receptor 8 
CCBP2                 0.258   chemokine binding protein 2 
CCR2                  0.255   chemokine (C-C motif) receptor 2 isoform B 
CCR2                  0.255   chemokine (C-C motif) receptor 2 isoform A 
CCR5                  0.243   chemokine (C-C motif) receptor 5 
CCR5                  0.243   chemokine (C-C motif) receptor 5 
CCRL1                 0.239   chemokine (C-C motif) receptor-like 1 
CCRL1                 0.239   chemokine (C-C motif) receptor-like 1 
CCR1                  0.236   chemokine (C-C motif) receptor 1 
XCR1                  0.235   XC chemokine receptor 1 
XCR1                  0.235   XC chemokine receptor 1 
CCR3                  0.233   CC chemokine receptor 3 
CCR3                  0.233   CC chemokine receptor 3 
CX3CR1                0.226   chemokine (C-X3-C motif) receptor 1 
AGTR1                 0.224   angiotensin II receptor, type 1 
AGTR1                 0.224   angiotensin II receptor, type 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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