INTU 28182

Name: INTU	Sequence: fasta or formatted (942aa)		NCBI GI: 44888833
Description: PDZ domain containing 6		Referenced in: Planar Cell Polarity PDZ Domain
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.2 40 2 C cysteine 2.1 20 2 D aspartate 6.1 57 2 E glutamate 7.5 71 3 F phenylalanine 3.3 31 2 G glycine 5.9 56 2 H histidine 2.7 25 2 I isoleucine 4.5 42 3 K lysine 6.9 65 3 L leucine 12.2 115 3 M methionine 1.4 13 1 N asparagine 3.3 31 1 P proline 5.5 52 2 Q glutamine 4.6 43 2 R arginine 4.1 39 2 S serine 9.3 88 3 T threonine 5.3 50 2 V valine 6.8 64 2 W tryptophan 1.1 10 1 Y tyrosine 3.2 30 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PDZ domain containing 6 MPDZ 0.009 multiple PDZ domain protein STXBP4 0.008 syntaxin binding protein 4 FRMPD2 0.007 FERM and PDZ domain containing 2 isoform 1 FRMPD2 0.007 FERM and PDZ domain containing 2 isoform 3 PARD3 0.007 partitioning-defective protein 3 homolog SRPK2 0.007 serine/arginine-rich protein-specific kinase 2 isofo... SRPK2 0.007 serine/arginine-rich protein-specific kinase 2 isofo... KIF6 0.006 kinesin family member 6 PDZD2 0.006 PDZ domain containing 2 PELP1 0.006 proline, glutamic acid and leucine rich protein 1 [... FAM133A 0.006 hypothetical protein LOC286499 INADL 0.006 InaD-like DLG2 0.005 chapsyn-110 isoform 3 DLG2 0.005 chapsyn-110 isoform 1 DLG2 0.005 chapsyn-110 isoform 2 NUCKS1 0.005 nuclear casein kinase and cyclin-dependent kinase su... RBL2 0.005 retinoblastoma-like 2 (p130) DLG1 0.005 discs, large homolog 1 isoform 1 DLG1 0.005 discs, large homolog 1 isoform 2 DLG4 0.005 post-synaptic density protein 95 isoform 1 DLG4 0.005 post-synaptic density protein 95 isoform 2 FRMPD4 0.005 FERM and PDZ domain containing 4 PARD3B 0.005 par-3 partitioning defective 3 homolog B isoform b ... ARHGEF11 0.005 Rho guanine nucleotide exchange factor (GEF) 11 isof... ARHGEF11 0.005 Rho guanine nucleotide exchange factor (GEF) 11 isofo... GCC2 0.005 GRIP and coiled-coil domain-containing 2 FRMPD3 0.004 PREDICTED: FERM and PDZ domain containing 3 FRMPD3 0.004 PREDICTED: FERM and PDZ domain containing 3 FRMPD3 0.004 PREDICTED: FERM and PDZ domain containing 3 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.