Guide to the Human Genome
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Name: STXBP4 Sequence: fasta or formatted (553aa) NCBI GI: 63999048
Description:

syntaxin binding protein 4

Referenced in:

PDZ Domain
ER, Golgi, and the Secretory Pathway
WW Domain

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         38           2
 C cysteine            1.6          9           1
 D aspartate           4.7         26           2
 E glutamate          10.1         56           2
 F phenylalanine       2.2         12           1
 G glycine             4.5         25           2
 H histidine           1.3          7           1
 I isoleucine          5.8         32           2
 K lysine              7.1         39           2
 L leucine            11.0         61           2
 M methionine          2.0         11           1
 N asparagine          5.1         28           2
 P proline             3.8         21           2
 Q glutamine           5.6         31           2
 R arginine            4.5         25           2
 S serine              9.6         53           2
 T threonine           5.8         32           2
 V valine              5.8         32           2
 W tryptophan          0.7          4           1
 Y tyrosine            2.0         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   syntaxin binding protein 4 
MLLT4                 0.033   myeloid/lymphoid or mixed-lineage leukemia (trithora...
MLLT4                 0.033   myeloid/lymphoid or mixed-lineage leukemia (trithora...
MLLT4                 0.033   myeloid/lymphoid or mixed-lineage leukemia (trithora...
MPDZ                  0.030   multiple PDZ domain protein 
PTPN13                0.028   protein tyrosine phosphatase, non-receptor type 13 i...
PTPN13                0.028   protein tyrosine phosphatase, non-receptor type 13 i...
PTPN13                0.028   protein tyrosine phosphatase, non-receptor type 13 i...
PTPN13                0.028   protein tyrosine phosphatase, non-receptor type 13 is...
LIN7A                 0.028   lin-7 homolog A 
PDZD2                 0.028   PDZ domain containing 2 
LIN7C                 0.027   lin-7 homolog C 
IL16                  0.026   interleukin 16 isoform 2 
DLG2                  0.026   chapsyn-110 isoform 3 
DLG2                  0.026   chapsyn-110 isoform 1 
DLG2                  0.026   chapsyn-110 isoform 2 
LIN7B                 0.026   lin-7 homolog B 
PARD3B                0.026   par-3 partitioning defective 3 homolog B isoform a ...
PARD3B                0.026   par-3 partitioning defective 3 homolog B isoform c ...
FHAD1                 0.026   forkhead-associated (FHA) phosphopeptide binding do...
RADIL                 0.024   Rap GTPase interactor 
DLG3                  0.024   synapse-associated protein 102 isoform a 
MAGI1                 0.024   membrane associated guanylate kinase, WW and PDZ dom...
MAGI1                 0.024   membrane associated guanylate kinase, WW and PDZ dom...
MAGI1                 0.024   membrane associated guanylate kinase, WW and PDZ dom...
UTRN                  0.024   utrophin 
PLEKHA7               0.023   pleckstrin homology domain containing, family A mem...
DLG4                  0.023   post-synaptic density protein 95 isoform 1 
DLG4                  0.023   post-synaptic density protein 95 isoform 2 
AKAP9                 0.023   A-kinase anchor protein 9 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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