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Search of human proteins with 44771211
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|44771211 mediator complex subunit 13-like [Homo sapiens]
(2210 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|44771211 mediator complex subunit 13-like [Homo sapiens] 4531 0.0
gi|102468717 mediator complex subunit 13 [Homo sapiens] 2164 0.0
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] 51 1e-05
gi|161016767 mucin 21 [Homo sapiens] 49 5e-05
gi|7657387 CCR4-NOT transcription complex, subunit 3 [Homo sapiens] 48 9e-05
gi|169173184 PREDICTED: hypothetical protein [Homo sapiens] 47 2e-04
gi|222418647 mucin 7, secreted precursor [Homo sapiens] 47 3e-04
gi|239755776 PREDICTED: similar to Mucin-19 [Homo sapiens] 47 3e-04
gi|239750277 PREDICTED: hypothetical protein XP_002347351 [Homo ... 47 3e-04
gi|239744587 PREDICTED: hypothetical protein XP_002343203 [Homo ... 47 3e-04
gi|222418649 mucin 7, secreted precursor [Homo sapiens] 47 3e-04
gi|222418645 mucin 7, secreted precursor [Homo sapiens] 47 3e-04
gi|55953110 retinoblastoma protein-binding zinc finger protein i... 47 3e-04
gi|20336260 retinoblastoma protein-binding zinc finger protein i... 47 3e-04
gi|20336258 retinoblastoma protein-binding zinc finger protein i... 47 3e-04
gi|20070107 orthodenticle homeobox 1 [Homo sapiens] 46 4e-04
gi|28559039 mediator complex subunit 1 [Homo sapiens] 46 5e-04
gi|87239981 tankyrase, TRF1-interacting ankyrin-related ADP-ribo... 46 5e-04
gi|186928829 dermokine isoform 4 precursor [Homo sapiens] 45 6e-04
gi|186928827 dermokine isoform 5 precursor [Homo sapiens] 45 6e-04
gi|186928825 dermokine isoform 3 precursor [Homo sapiens] 45 6e-04
gi|33504489 dermokine isoform 2 precursor [Homo sapiens] 45 6e-04
gi|217416332 trinucleotide repeat containing 6C isoform 1 [Homo ... 45 0.001
gi|33413425 trinucleotide repeat containing 6C isoform 2 [Homo s... 45 0.001
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 44 0.001
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 44 0.001
gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens] 44 0.001
gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens] 44 0.001
gi|110832843 TBP-associated factor 4 [Homo sapiens] 44 0.002
gi|192807286 zinc finger and BTB domain containing 4 [Homo sapiens] 44 0.002
>gi|44771211 mediator complex subunit 13-like [Homo sapiens]
Length = 2210
Score = 4531 bits (11752), Expect = 0.0
Identities = 2210/2210 (100%), Positives = 2210/2210 (100%)
Query: 1 MTAAANWVANGASLEDCHSNLFSLAELTGIKWRRYNFGGHGDCGPIISAPAQDDPILLSF 60
MTAAANWVANGASLEDCHSNLFSLAELTGIKWRRYNFGGHGDCGPIISAPAQDDPILLSF
Sbjct: 1 MTAAANWVANGASLEDCHSNLFSLAELTGIKWRRYNFGGHGDCGPIISAPAQDDPILLSF 60
Query: 61 IRCLQANLLCVWRRDVKPDCKELWIFWWGDEPNLVGVIHHELQVVEEGLWENGLSYECRT 120
IRCLQANLLCVWRRDVKPDCKELWIFWWGDEPNLVGVIHHELQVVEEGLWENGLSYECRT
Sbjct: 61 IRCLQANLLCVWRRDVKPDCKELWIFWWGDEPNLVGVIHHELQVVEEGLWENGLSYECRT 120
Query: 121 LLFKAIHNLLERCLMDKNFVRIGKWFVRPYEKDEKPVNKSEHLSCAFTFFLHGESNVCTS 180
LLFKAIHNLLERCLMDKNFVRIGKWFVRPYEKDEKPVNKSEHLSCAFTFFLHGESNVCTS
Sbjct: 121 LLFKAIHNLLERCLMDKNFVRIGKWFVRPYEKDEKPVNKSEHLSCAFTFFLHGESNVCTS 180
Query: 181 VEIAQHQPIYLINEEHIHMAQSSPAPFQVLVSPYGLNGTLTGQAYKMSDPATRKLIEEWQ 240
VEIAQHQPIYLINEEHIHMAQSSPAPFQVLVSPYGLNGTLTGQAYKMSDPATRKLIEEWQ
Sbjct: 181 VEIAQHQPIYLINEEHIHMAQSSPAPFQVLVSPYGLNGTLTGQAYKMSDPATRKLIEEWQ 240
Query: 241 YFYPMVLKKKEESKEEDELGYDDDFPVAVEVIVGGVRMVYPSAFVLISQNDIPVPQSVAS 300
YFYPMVLKKKEESKEEDELGYDDDFPVAVEVIVGGVRMVYPSAFVLISQNDIPVPQSVAS
Sbjct: 241 YFYPMVLKKKEESKEEDELGYDDDFPVAVEVIVGGVRMVYPSAFVLISQNDIPVPQSVAS 300
Query: 301 AGGHIAVGQQGLGSVKDPSNCGMPLTPPTSPEQAILGESGGMQSAASHLVSQDGGMITMH 360
AGGHIAVGQQGLGSVKDPSNCGMPLTPPTSPEQAILGESGGMQSAASHLVSQDGGMITMH
Sbjct: 301 AGGHIAVGQQGLGSVKDPSNCGMPLTPPTSPEQAILGESGGMQSAASHLVSQDGGMITMH 360
Query: 361 SPKRSGKIPPKLHNHMVHRVWKECILNRTQSKRSQMSTPTLEEEPASNPATWDFVDPTQR 420
SPKRSGKIPPKLHNHMVHRVWKECILNRTQSKRSQMSTPTLEEEPASNPATWDFVDPTQR
Sbjct: 361 SPKRSGKIPPKLHNHMVHRVWKECILNRTQSKRSQMSTPTLEEEPASNPATWDFVDPTQR 420
Query: 421 VSCSCSRHKLLKRCAVGPNRPPTVSQPGFSAGPSSSSSLPPPASSKHKTAERQEKGDKLQ 480
VSCSCSRHKLLKRCAVGPNRPPTVSQPGFSAGPSSSSSLPPPASSKHKTAERQEKGDKLQ
Sbjct: 421 VSCSCSRHKLLKRCAVGPNRPPTVSQPGFSAGPSSSSSLPPPASSKHKTAERQEKGDKLQ 480
Query: 481 KRPLIPFHHRPSVAEELCMEQDTPGQKLGLAGIDSSLEVSSSRKYDKQMAVPSRNTSKQM 540
KRPLIPFHHRPSVAEELCMEQDTPGQKLGLAGIDSSLEVSSSRKYDKQMAVPSRNTSKQM
Sbjct: 481 KRPLIPFHHRPSVAEELCMEQDTPGQKLGLAGIDSSLEVSSSRKYDKQMAVPSRNTSKQM 540
Query: 541 NLNPMDSPHSPISPLPPTLSPQPRGQETESLDPPSVPVNPALYGNGLELQQLSTLDDRTV 600
NLNPMDSPHSPISPLPPTLSPQPRGQETESLDPPSVPVNPALYGNGLELQQLSTLDDRTV
Sbjct: 541 NLNPMDSPHSPISPLPPTLSPQPRGQETESLDPPSVPVNPALYGNGLELQQLSTLDDRTV 600
Query: 601 LVGQRLPLMAEVSETALYCGIRPSNPESSEKWWHSYRLPPSDDAEFRPPELQGERCDAKM 660
LVGQRLPLMAEVSETALYCGIRPSNPESSEKWWHSYRLPPSDDAEFRPPELQGERCDAKM
Sbjct: 601 LVGQRLPLMAEVSETALYCGIRPSNPESSEKWWHSYRLPPSDDAEFRPPELQGERCDAKM 660
Query: 661 EVNSESTALQRLLAQPNKRFKIWQDKQPQLQPLHFLDPLPLSQQPGDSLGEVNDPYTFED 720
EVNSESTALQRLLAQPNKRFKIWQDKQPQLQPLHFLDPLPLSQQPGDSLGEVNDPYTFED
Sbjct: 661 EVNSESTALQRLLAQPNKRFKIWQDKQPQLQPLHFLDPLPLSQQPGDSLGEVNDPYTFED 720
Query: 721 GDIKYIFTANKKCKQGTEKDSLKKNKSEDGFGTKDVTTPGHSTPVPDGKNAMSIFSSATK 780
GDIKYIFTANKKCKQGTEKDSLKKNKSEDGFGTKDVTTPGHSTPVPDGKNAMSIFSSATK
Sbjct: 721 GDIKYIFTANKKCKQGTEKDSLKKNKSEDGFGTKDVTTPGHSTPVPDGKNAMSIFSSATK 780
Query: 781 TDVRQDNAAGRAGSSSLTQVTDLAPSLHDLDNIFDNSDDDELGAVSPALRSSKMPAVGTE 840
TDVRQDNAAGRAGSSSLTQVTDLAPSLHDLDNIFDNSDDDELGAVSPALRSSKMPAVGTE
Sbjct: 781 TDVRQDNAAGRAGSSSLTQVTDLAPSLHDLDNIFDNSDDDELGAVSPALRSSKMPAVGTE 840
Query: 841 DRPLGKDGRAAVPYPPTVADLQRMFPTPPSLEQHPAFSPVMNYKDGISSETVTALGMMES 900
DRPLGKDGRAAVPYPPTVADLQRMFPTPPSLEQHPAFSPVMNYKDGISSETVTALGMMES
Sbjct: 841 DRPLGKDGRAAVPYPPTVADLQRMFPTPPSLEQHPAFSPVMNYKDGISSETVTALGMMES 900
Query: 901 PMVSMVSTQLTEFKMEVEDGLGSPKPEEIKDFSYVHKVPSFQPFVGSSMFAPLKMLPSHC 960
PMVSMVSTQLTEFKMEVEDGLGSPKPEEIKDFSYVHKVPSFQPFVGSSMFAPLKMLPSHC
Sbjct: 901 PMVSMVSTQLTEFKMEVEDGLGSPKPEEIKDFSYVHKVPSFQPFVGSSMFAPLKMLPSHC 960
Query: 961 LLPLKIPDACLFRPSWAIPPKIEQLPMPPAATFIRDGYNNVPSVGSLADPDYLNTPQMNT 1020
LLPLKIPDACLFRPSWAIPPKIEQLPMPPAATFIRDGYNNVPSVGSLADPDYLNTPQMNT
Sbjct: 961 LLPLKIPDACLFRPSWAIPPKIEQLPMPPAATFIRDGYNNVPSVGSLADPDYLNTPQMNT 1020
Query: 1021 PVTLNSAAPASNSGAGVLPSPATPRFSVPTPRTPRTPRTPRGGGTASGQGSVKYDSTDQG 1080
PVTLNSAAPASNSGAGVLPSPATPRFSVPTPRTPRTPRTPRGGGTASGQGSVKYDSTDQG
Sbjct: 1021 PVTLNSAAPASNSGAGVLPSPATPRFSVPTPRTPRTPRTPRGGGTASGQGSVKYDSTDQG 1080
Query: 1081 SPASTPSTTRPLNSVEPATMQPIPEAHSLYVTLILSDSVMNIFKDRNFDSCCICACNMNI 1140
SPASTPSTTRPLNSVEPATMQPIPEAHSLYVTLILSDSVMNIFKDRNFDSCCICACNMNI
Sbjct: 1081 SPASTPSTTRPLNSVEPATMQPIPEAHSLYVTLILSDSVMNIFKDRNFDSCCICACNMNI 1140
Query: 1141 KGADVGLYIPDSSNEDQYRCTCGFSAIMNRKLGYNSGLFLEDELDIFGKNSDIGQAAERR 1200
KGADVGLYIPDSSNEDQYRCTCGFSAIMNRKLGYNSGLFLEDELDIFGKNSDIGQAAERR
Sbjct: 1141 KGADVGLYIPDSSNEDQYRCTCGFSAIMNRKLGYNSGLFLEDELDIFGKNSDIGQAAERR 1200
Query: 1201 LMMCQSTFLPQVEGTKKPQEPPISLLLLLQNQHTQPFASLNFLDYISSNNRQTLPCVSWS 1260
LMMCQSTFLPQVEGTKKPQEPPISLLLLLQNQHTQPFASLNFLDYISSNNRQTLPCVSWS
Sbjct: 1201 LMMCQSTFLPQVEGTKKPQEPPISLLLLLQNQHTQPFASLNFLDYISSNNRQTLPCVSWS 1260
Query: 1261 YDRVQADNNDYWTECFNALEQGRQYVDNPTGGKVDEALVRSATVHSWPHSNVLDISMLSS 1320
YDRVQADNNDYWTECFNALEQGRQYVDNPTGGKVDEALVRSATVHSWPHSNVLDISMLSS
Sbjct: 1261 YDRVQADNNDYWTECFNALEQGRQYVDNPTGGKVDEALVRSATVHSWPHSNVLDISMLSS 1320
Query: 1321 QDVVRMLLSLQPFLQDAIQKKRTGRTWENIQHVQGPLTWQQFHKMAGRGTYGSEESPEPL 1380
QDVVRMLLSLQPFLQDAIQKKRTGRTWENIQHVQGPLTWQQFHKMAGRGTYGSEESPEPL
Sbjct: 1321 QDVVRMLLSLQPFLQDAIQKKRTGRTWENIQHVQGPLTWQQFHKMAGRGTYGSEESPEPL 1380
Query: 1381 PIPTLLVGYDKDFLTISPFSLPFWERLLLDPYGGHRDVAYIVVCPENEALLEGAKTFFRD 1440
PIPTLLVGYDKDFLTISPFSLPFWERLLLDPYGGHRDVAYIVVCPENEALLEGAKTFFRD
Sbjct: 1381 PIPTLLVGYDKDFLTISPFSLPFWERLLLDPYGGHRDVAYIVVCPENEALLEGAKTFFRD 1440
Query: 1441 LSAVYEMCRLGQHKPICKVLRDGIMRVGKTVAQKLTDELVSEWFNQPWSGEENDNHSRLK 1500
LSAVYEMCRLGQHKPICKVLRDGIMRVGKTVAQKLTDELVSEWFNQPWSGEENDNHSRLK
Sbjct: 1441 LSAVYEMCRLGQHKPICKVLRDGIMRVGKTVAQKLTDELVSEWFNQPWSGEENDNHSRLK 1500
Query: 1501 LYAQVCRHHLAPYLATLQLDSSLLIPPKYQTPPAAAQGQATPGNAGPLAPNGSAAPPAGS 1560
LYAQVCRHHLAPYLATLQLDSSLLIPPKYQTPPAAAQGQATPGNAGPLAPNGSAAPPAGS
Sbjct: 1501 LYAQVCRHHLAPYLATLQLDSSLLIPPKYQTPPAAAQGQATPGNAGPLAPNGSAAPPAGS 1560
Query: 1561 AFNPTSNSSSTNPAASSSASGSSVPPVSSSASAPGISQISTTSSSGFSGSVGGQNPSTGG 1620
AFNPTSNSSSTNPAASSSASGSSVPPVSSSASAPGISQISTTSSSGFSGSVGGQNPSTGG
Sbjct: 1561 AFNPTSNSSSTNPAASSSASGSSVPPVSSSASAPGISQISTTSSSGFSGSVGGQNPSTGG 1620
Query: 1621 ISADRTQGNIGCGGDTDPGQSSSQPSQDGQESVTERERIGIPTEPDSADSHAHPPAVVIY 1680
ISADRTQGNIGCGGDTDPGQSSSQPSQDGQESVTERERIGIPTEPDSADSHAHPPAVVIY
Sbjct: 1621 ISADRTQGNIGCGGDTDPGQSSSQPSQDGQESVTERERIGIPTEPDSADSHAHPPAVVIY 1680
Query: 1681 MVDPFTYAAEEDSTSGNFWLLSLMRCYTEMLDNLPEHMRNSFILQIVPCQYMLQTMKDEQ 1740
MVDPFTYAAEEDSTSGNFWLLSLMRCYTEMLDNLPEHMRNSFILQIVPCQYMLQTMKDEQ
Sbjct: 1681 MVDPFTYAAEEDSTSGNFWLLSLMRCYTEMLDNLPEHMRNSFILQIVPCQYMLQTMKDEQ 1740
Query: 1741 VFYIQYLKSMAFSVYCQCRRPLPTQIHIKSLTGFGPAASIEMTLKNPERPSPIQLYSPPF 1800
VFYIQYLKSMAFSVYCQCRRPLPTQIHIKSLTGFGPAASIEMTLKNPERPSPIQLYSPPF
Sbjct: 1741 VFYIQYLKSMAFSVYCQCRRPLPTQIHIKSLTGFGPAASIEMTLKNPERPSPIQLYSPPF 1800
Query: 1801 ILAPIKDKQTELGETFGEASQKYNVLFVGYCLSHDQRWLLASCTDLHGELLETCVVNIAL 1860
ILAPIKDKQTELGETFGEASQKYNVLFVGYCLSHDQRWLLASCTDLHGELLETCVVNIAL
Sbjct: 1801 ILAPIKDKQTELGETFGEASQKYNVLFVGYCLSHDQRWLLASCTDLHGELLETCVVNIAL 1860
Query: 1861 PNRSRRSKVSARKIGLQKLWEWCIGIVQMTSLPWRVVIGRLGRLGHGELKDWSILLGECS 1920
PNRSRRSKVSARKIGLQKLWEWCIGIVQMTSLPWRVVIGRLGRLGHGELKDWSILLGECS
Sbjct: 1861 PNRSRRSKVSARKIGLQKLWEWCIGIVQMTSLPWRVVIGRLGRLGHGELKDWSILLGECS 1920
Query: 1921 LQTISKKLKDVCRMCGISAADSPSILSACLVAMEPQGSFVVMPDAVTMGSVFGRSTALNM 1980
LQTISKKLKDVCRMCGISAADSPSILSACLVAMEPQGSFVVMPDAVTMGSVFGRSTALNM
Sbjct: 1921 LQTISKKLKDVCRMCGISAADSPSILSACLVAMEPQGSFVVMPDAVTMGSVFGRSTALNM 1980
Query: 1981 QSSQLNTPQDASCTHILVFPTSSTIQVAPANYPNEDGFSPNNDDMFVDLPFPDDMDNDIG 2040
QSSQLNTPQDASCTHILVFPTSSTIQVAPANYPNEDGFSPNNDDMFVDLPFPDDMDNDIG
Sbjct: 1981 QSSQLNTPQDASCTHILVFPTSSTIQVAPANYPNEDGFSPNNDDMFVDLPFPDDMDNDIG 2040
Query: 2041 ILMTGNLHSSPNSSPVPSPGSPSGIGVGSHFQHSRSQGERLLSREAPEELKQQPLALGYF 2100
ILMTGNLHSSPNSSPVPSPGSPSGIGVGSHFQHSRSQGERLLSREAPEELKQQPLALGYF
Sbjct: 2041 ILMTGNLHSSPNSSPVPSPGSPSGIGVGSHFQHSRSQGERLLSREAPEELKQQPLALGYF 2100
Query: 2101 VSTAKAENLPQWFWSSCPQAQNQCPLFLKASLHHHISVAQTDELLPARNSQRVPHPLDSK 2160
VSTAKAENLPQWFWSSCPQAQNQCPLFLKASLHHHISVAQTDELLPARNSQRVPHPLDSK
Sbjct: 2101 VSTAKAENLPQWFWSSCPQAQNQCPLFLKASLHHHISVAQTDELLPARNSQRVPHPLDSK 2160
Query: 2161 TTSDVLRFVLEQYNALSWLTCNPATQDRTSCLPVHFVVLTQLYNAIMNIL 2210
TTSDVLRFVLEQYNALSWLTCNPATQDRTSCLPVHFVVLTQLYNAIMNIL
Sbjct: 2161 TTSDVLRFVLEQYNALSWLTCNPATQDRTSCLPVHFVVLTQLYNAIMNIL 2210
>gi|102468717 mediator complex subunit 13 [Homo sapiens]
Length = 2174
Score = 2164 bits (5606), Expect = 0.0
Identities = 1210/2287 (52%), Positives = 1531/2287 (66%), Gaps = 194/2287 (8%)
Query: 4 AANWVANGASLEDCHSNLFSLAELTGIKWRRYNFGGHGDCGPIISAPAQDDPILLSFIRC 63
+A++V NGASLEDCH NLF LA+LTGIKW++Y + G PI+ ++DPIL SF RC
Sbjct: 2 SASFVPNGASLEDCHCNLFCLADLTGIKWKKYVWQGPTSA-PILFPVTEEDPILSSFSRC 60
Query: 64 LQANLLCVWRRDVKPDCKELWIFWWGDEPNLVGVIHHELQVVEEGLWENGLSYECRTLLF 123
L+A++L VWRRD +P +ELWIFWWG++P+ +IHH+L E+G+WENGLSYECRTLLF
Sbjct: 61 LKADVLGVWRRDQRPGRRELWIFWWGEDPSFADLIHHDLSEEEDGVWENGLSYECRTLLF 120
Query: 124 KAIHNLLERCLMDKNFVRIGKWFVRPYEKDEKPVNKSEHLSCAFTFFLHGESNVCTSVEI 183
KA+HNLLERCLM++NFVRIGKWFV+PYEKDEKP+NKSEHLSC+FTFFLHG+SNVCTSVEI
Sbjct: 121 KAVHNLLERCLMNRNFVRIGKWFVKPYEKDEKPINKSEHLSCSFTFFLHGDSNVCTSVEI 180
Query: 184 AQHQPIYLINEEHIHMAQSSPAPFQVLVSPYGLNGTLTGQAYKMSDPATRKLIEEWQYFY 243
QHQP+YL++EEHI +AQ S +PFQV++ P+GLNGTLTGQA+KMSD AT+KLI EW+ FY
Sbjct: 181 NQHQPVYLLSEEHITLAQQSNSPFQVILCPFGLNGTLTGQAFKMSDSATKKLIGEWKQFY 240
Query: 244 PM--VLKKKEESKEEDELGYDDDFPVAVEVIVGGVRMVYPSAFVLISQNDIPVPQSVASA 301
P+ LK+ E K+ED + ++DD AVEV+V GVRM+YP+ FVL+ Q+DIP P V S
Sbjct: 241 PISCCLKEMSEEKQED-MDWEDDSLAAVEVLVAGVRMIYPACFVLVPQSDIPTPSPVGST 299
Query: 302 GGHIAVGQQGL----GSVKDPSNCGMPLTPPTSPEQAILGESGGMQSAASHLVSQDGGMI 357
H + G+ S +DP+ + LTPPTSPE+ + +Q DG
Sbjct: 300 --HCSSSCLGVHQVPASTRDPAMSSVTLTPPTSPEEVQTVDPQSVQKWVKFSSVSDG-FN 356
Query: 358 TMHSPKRSGKIPPKLHNHMVHRVWKECILNRTQSKR--SQMSTPTLEEEPASNPATWDFV 415
+ + GKIP KL NH+V RVW+EC +NR Q+KR S S EE A+ A+WDFV
Sbjct: 357 SDSTSHHGGKIPRKLANHVVDRVWQECNMNRAQNKRKYSASSGGLCEEATAAKVASWDFV 416
Query: 416 DPTQRVSCSCSRHKLLKRCAVGPNRPPTVSQPGFSAGPSSSSSLPPPASSKHKTAERQEK 475
+ TQR +CSC RHK LK G Q G + + P KHKT E+QEK
Sbjct: 417 EATQRTNCSCLRHKNLKSRNAG--------QQGQAPSLGQQQQILP----KHKTNEKQEK 464
Query: 476 GDKLQKRPLIPFHHRPSVAEELCMEQDTPGQKLGLAGIDSSLEVSSSRKYDKQMAVPSRN 535
+K QKRPL PFHHR SV++++ M+ D+ Q+L ++ DS + S+ R D P +
Sbjct: 465 SEKPQKRPLTPFHHRVSVSDDVGMDADSASQRLVISAPDSQVRFSNIRTNDVAKT-PQMH 523
Query: 536 TSKQMNLNPMDSPHSPISPLPPTLSPQPRGQETESLDP-PSVPVNPALYGNGLE--LQQL 592
++ N SP PP LSP P E + PS P + Y L
Sbjct: 524 GTEMAN-----------SPQPPPLSPHPCDVVDEGVTKTPSTPQSQHFYQMPTPDPLVPS 572
Query: 593 STLDDRTVLVGQRLPLM-AEVSETALYCGIRPSNPESSEKW-WHSYRLPPSDDAEFRPPE 650
++DR + Q P E E +Y G + E W Y+ P D EF PP+
Sbjct: 573 KPMEDRIDSLSQSFPPQYQEAVEPTVYVGTAVNLEEDEANIAWKYYKFPKKKDVEFLPPQ 632
Query: 651 LQGERC--DAKMEVNSES-TALQRLLAQPNKRFKIWQDKQPQLQPLHFLDPLPLSQQPGD 707
L ++ D ES T++ L+ Q K K+ + Q Q + LS D
Sbjct: 633 LPSDKFKDDPVGPFGQESVTSVTELMVQCKKPLKVSDELVQQYQ----IKNQCLSAIASD 688
Query: 708 SLGEVN-DPYTFEDGDIKYIFTANKKCKQGTEKDSLKKNKSEDGFGTKDVTTPGHSTPVP 766
+ E DPY F +GD +++F +KK +Q +E+++ KK+K EDG T VT H
Sbjct: 689 AEQEPKIDPYAFVEGDEEFLFP-DKKDRQNSEREAGKKHKVEDG--TSSVTVLSHE---- 741
Query: 767 DGKNAMSIFSSATKTDVRQDNAAGRAGSSSLTQVTDLAPSLHDLDNIFDNSDDDELGAVS 826
++AMS+FS + K D + + R S+SL +DLA S DLDN+F NSD+DEL
Sbjct: 742 --EDAMSLFSPSIKQDAPRPTSHARPPSTSLIYDSDLAVSYTDLDNLF-NSDEDELTP-- 796
Query: 827 PALRSSKMPAVGTEDRPLGKDGRAAVPYPPT---VADLQRMFPTPPSLEQH-PAFSPV-M 881
SK A G++D+ K+ + P + ADL +M+PTPPSLEQH FSP+ M
Sbjct: 797 ----GSKKSANGSDDKASCKESKTGNLDPLSCISTADLHKMYPTPPSLEQHIMGFSPMNM 852
Query: 882 NYKDGISSETVTALGMMESPMVSMVSTQLTEFKMEVEDGLGSPKPEEIKDFSYVHKVPSF 941
N K+ S +T ++E S+ + +FK+EV++G SPKP EIKDFSYV+K +
Sbjct: 853 NNKEYGSMDTTPGGTVLEGNSSSIGA----QFKIEVDEGFCSPKPSEIKDFSYVYKPENC 908
Query: 942 QPFVGSSMFAPLKMLPSHCLLPLKIPDACLFRPSWAIPPKIEQLPMPPAATFIRDGYNNV 1001
Q VG SMFAPLK LPS L P+K+P+ C++R SW + K+E L P+ FI++G
Sbjct: 909 QILVGCSMFAPLKTLPSQYLPPIKLPEECIYRQSWTVG-KLELLSSGPSMPFIKEGD--- 964
Query: 1002 PSVGSLADPDY--LNTPQMNTPVTLN-SAAPASNSGAGVLPSPATPRFSVPTPRTPRTPR 1058
GS D +Y TPQ +T + S+AP SNSGAG+LPSP+TPRF PTPRTPRTPR
Sbjct: 965 ---GSNMDQEYGTAYTPQTHTSFGMPPSSAPPSNSGAGILPSPSTPRF--PTPRTPRTPR 1019
Query: 1059 TPRG-GGTASGQGSVKYDSTDQGSPASTPSTTRPLNSVEPATMQPIPEAHSLYVTLILSD 1117
TPRG GG AS QGSVKY+++D SPASTPST RPLNSVEPAT+ IPEAHSLYV LILS+
Sbjct: 1020 TPRGAGGPASAQGSVKYENSDLYSPASTPSTCRPLNSVEPATVPSIPEAHSLYVNLILSE 1079
Query: 1118 SVMNIFKDRNFDSCCICACNMNIKGADVGLYIPDSSNEDQYRCTCGFSAIMNRKLGYNSG 1177
SVMN+FKD NFDSCCIC CNMNIKGADVG+YIPD + E QYRCTCGFSA+MNRK G NSG
Sbjct: 1080 SVMNLFKDCNFDSCCICVCNMNIKGADVGVYIPDPTQEAQYRCTCGFSAVMNRKFGNNSG 1139
Query: 1178 LFLEDELDIFGKNSDIGQAAERRLMMCQSTFLPQVEGTKKPQEP-PISLLLLLQNQHTQP 1236
LFLEDELDI G+N+D G+ AE+R ++T V G K E L+LLLQ+Q T
Sbjct: 1140 LFLEDELDIIGRNTDCGKEAEKRFEALRATSAEHVNGGLKESEKLSDDLILLLQDQCTNL 1199
Query: 1237 FASLNFLDYISSNNRQTLPCVSWSYDRVQADNNDYWTECFNALEQGRQYVDNPTGGKVDE 1296
F+ D + P + V+ + D +C+ ALE GRQ++DN +GGKVDE
Sbjct: 1200 FSPFGAAD------QDPFPKSGVISNWVRVEERDCCNDCYLALEHGRQFMDNMSGGKVDE 1253
Query: 1297 ALVRSATVHSWPHSNVLDISMLSSQDVVRMLLSLQPFLQDAIQKKRTGRTWENIQHVQGP 1356
ALV+S+ +H W N D+SM SQD++RMLLSLQP LQDAIQKKRT R W VQGP
Sbjct: 1254 ALVKSSCLHPWSKRN--DVSMQCSQDILRMLLSLQPVLQDAIQKKRTVRPWG----VQGP 1307
Query: 1357 LTWQQFHKMAGRGTYGSEESPEPLPIPTLLVGYDKDFLTISPFSLPFWERLLLDPYGGHR 1416
LTWQQFHKMAGRG+YG++ESPEPLPIPT L+GYD D+L +SPF+LP+WERL+L+PYG R
Sbjct: 1308 LTWQQFHKMAGRGSYGTDESPEPLPIPTFLLGYDYDYLVLSPFALPYWERLMLEPYGSQR 1367
Query: 1417 DVAYIVVCPENEALLEGAKTFFRDLSAVYEMCRLGQHKPICKVLRDGIMRVGKTVAQKLT 1476
D+AY+V+CPENEALL GAK+FFRDL+A+YE CRLGQH+P+ ++L DGIMRVG T ++KL+
Sbjct: 1368 DIAYVVLCPENEALLNGAKSFFRDLTAIYESCRLGQHRPVSRLLTDGIMRVGSTASKKLS 1427
Query: 1477 DELVSEWFNQPWSGEENDNHSRLKLYAQVCRHHLAPYLATLQLDSSLLIPPKYQTPPAAA 1536
++LV+EWF+Q G N+ S+LKLYAQVCR+ L PYLA+L LDSSLL P P +
Sbjct: 1428 EKLVAEWFSQAADGN-NEAFSKLKLYAQVCRYDLGPYLASLPLDSSLLSQPNLVAP--TS 1484
Query: 1537 QGQATP------GNAGPLAPNGSAAPPAGSAFNPTS-----------NSSSTNPAASSSA 1579
Q TP GNA P+ + A A S TS NS+ T + SSS+
Sbjct: 1485 QSLITPPQMTNTGNAN--TPSATLASAASSTMTVTSGVAISTSVATANSTLTTASTSSSS 1542
Query: 1580 SGSSVPPVSS----------SASAPGISQISTTSSSGFSGSVGGQNPS---TGGISADRT 1626
S + VSS S ++ +ST +++ SG +GGQ S T GIS
Sbjct: 1543 SSNLNSGVSSNKLPSFPPFGSMNSNAAGSMSTQANTVQSGQLGGQQTSALQTAGIS---- 1598
Query: 1627 QGNIGCGGDTDPGQSSSQPSQ---DGQESVTERERIGIPTEPDSADSHA--HPPAVVIYM 1681
G+SSS P+Q D ES +R+++GIPT+ DSHA +PPA+V+Y+
Sbjct: 1599 ------------GESSSLPTQPHPDVSESTMDRDKVGIPTD---GDSHAVTYPPAIVVYI 1643
Query: 1682 VDPFTYAAEEDST-SGNFWLLSLMRCYTEMLDNLPEHMRNSFILQIVPCQYMLQTMKDE- 1739
+DPFTY ++ST S + W L L+RC+ EM+ LP H++++ +QI+PCQY+LQ +K E
Sbjct: 1644 IDPFTYENTDESTNSSSVWTLGLLRCFLEMVQTLPPHIKSTVSVQIIPCQYLLQPVKHED 1703
Query: 1740 QVFYIQYLKSMAFSVYCQCRRPLPTQIHIKSLTGFGPAASIEMTLKNPERPSPIQLYSPP 1799
+ Y Q+LKS+AFS + QCRRPLPT ++K+LTGFGP ++E L++P+RP I+LY+PP
Sbjct: 1704 REIYPQHLKSLAFSAFTQCRRPLPTSTNVKTLTGFGPGLAMETALRSPDRPECIRLYAPP 1763
Query: 1800 FILAPIKDKQTELGETFGEASQKYNVLFVGYCLSHDQRWLLASCTDLHGELLETCVVNIA 1859
FILAP+KDKQTELGETFGEA QKYNVLFVGYCLSHDQRW+LASCTDL+GELLETC++NI
Sbjct: 1764 FILAPVKDKQTELGETFGEAGQKYNVLFVGYCLSHDQRWILASCTDLYGELLETCIINID 1823
Query: 1860 LPNRSRRSKVSARKIGLQKLWEWCIGIVQMTSLPWRVVIGRLGRLGHGELKDWSILLGEC 1919
+PNR+RR K SARK GLQKLWEWC+G+VQM+SLPWRVVIGRLGR+GHGELKDWS LL
Sbjct: 1824 VPNRARRKKSSARKFGLQKLWEWCLGLVQMSSLPWRVVIGRLGRIGHGELKDWSCLLSRR 1883
Query: 1920 SLQTISKKLKDVCRMCGISAADSPSILSACLVAMEPQGSFVVMPDAVTMGSVFGRSTALN 1979
+LQ++SK+LKD+CRMCGISAADSPSILSACLVAMEPQGSFV+MPD+V+ GSVFGRST LN
Sbjct: 1884 NLQSLSKRLKDMCRMCGISAADSPSILSACLVAMEPQGSFVIMPDSVSTGSVFGRSTTLN 1943
Query: 1980 MQSSQLNTPQDASCTHILVFPTSSTIQVAPANYPNED---GFSPNND-----DMFVDLPF 2031
MQ+SQLNTPQD SCTHILVFPTS+++QVA A Y E+ F+PNND +F L
Sbjct: 1944 MQTSQLNTPQDTSCTHILVFPTSASVQVASATYTTENLDLAFNPNNDGADGMGIFDLLDT 2003
Query: 2032 PDDMDNDIGILMTGNLHSSPNSSPVPSPGSPSGIGVGSHFQHSRSQG-----ERLLSREA 2086
DD+D DI L +SP SPV SP GSH+ H G +RLLS E
Sbjct: 2004 GDDLDPDI----INILPASPTGSPVHSP--------GSHYPHGGDAGKGQSTDRLLSTEP 2051
Query: 2087 PEE---LKQQPLALGYFVSTAKAENLPQWFWSSCPQAQNQCPLFLKASLHHHISVAQTDE 2143
EE + QQPLALGYFVSTAKA LP WFWS+CPQAQ QCPLFLKASLH H+ Q+DE
Sbjct: 2052 HEEVPNILQQPLALGYFVSTAKAGPLPDWFWSACPQAQYQCPLFLKASLHLHVPSVQSDE 2111
Query: 2144 LLPARNSQRVPHPLDSKTTSDVLRFVLEQYNALSWLTCNPATQDRTSCLPVHFVVLTQLY 2203
LL +++S HPLDS TSDVLRFVLEQYNALSWLTC+PATQDR SCLP+HFVVL QLY
Sbjct: 2112 LLHSKHS----HPLDSNQTSDVLRFVLEQYNALSWLTCDPATQDRRSCLPIHFVVLNQLY 2167
Query: 2204 NAIMNIL 2210
N IMN+L
Sbjct: 2168 NFIMNML 2174
>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
Length = 2968
Score = 50.8 bits (120), Expect = 1e-05
Identities = 38/138 (27%), Positives = 64/138 (46%)
Query: 1538 GQATPGNAGPLAPNGSAAPPAGSAFNPTSNSSSTNPAASSSASGSSVPPVSSSASAPGIS 1597
G G A + AA PA S+ + +S+SSS++ ++SSS+S SS SSS+S+ S
Sbjct: 2593 GGCGTGGRNCSAASSRAASPASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2652
Query: 1598 QISTTSSSGFSGSVGGQNPSTGGISADRTQGNIGCGGDTDPGQSSSQPSQDGQESVTERE 1657
S++SSS S S + +T S+ + P ++ P++ +++ R
Sbjct: 2653 SSSSSSSSSSSSSSSSSSSTTDEDSSCSSDDEAAPAPTAGPSAQAALPTKATKQAGKARP 2712
Query: 1658 RIGIPTEPDSADSHAHPP 1675
P + A PP
Sbjct: 2713 SAHSPGKKTPAPQPQAPP 2730
Score = 44.3 bits (103), Expect = 0.001
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 1/126 (0%)
Query: 1551 NGSAAPPAGSAFNPTSNSSSTNPAASSSASGSSVPPVSSSASAPGISQISTTSSSGFSGS 1610
NG G ++S + +PA+SSS+S SS SSS+S+ S S++SSS S S
Sbjct: 2590 NGDGGCGTGGRNCSAASSRAASPASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2649
Query: 1611 VGGQNPSTGGISADRTQGNIGCGGDTDPGQSSSQPSQDGQESVTERERIGIPTEPDSADS 1670
+ S+ S+ + + D D SS + + + +PT+
Sbjct: 2650 SSSSSSSSSSSSSSSSSSSSSSTTDEDSSCSSDDEAAPA-PTAGPSAQAALPTKATKQAG 2708
Query: 1671 HAHPPA 1676
A P A
Sbjct: 2709 KARPSA 2714
Score = 43.1 bits (100), Expect = 0.003
Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 24/157 (15%)
Query: 1544 NAGPLAPNGSAAPPAGSAFNPTSNSSSTNPAASSSASGSS-------------------- 1583
+ P +P+ + A G+ + +S+SSS+ ++SSS+S SS
Sbjct: 2538 SGNPKSPDKAQAEQDGAEESESSSSSSSGSSSSSSSSSSSGSETEGEEEGDKNGDGGCGT 2597
Query: 1584 ----VPPVSSSASAPGISQISTTSSSGFSGSVGGQNPSTGGISADRTQGNIGCGGDTDPG 1639
SS A++P S S++SSS S S + S+ S+ + + +
Sbjct: 2598 GGRNCSAASSRAASPASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2657
Query: 1640 QSSSQPSQDGQESVTERERIGIPTEPDSADSHAHPPA 1676
SSS S S T E ++ ++A + P+
Sbjct: 2658 SSSSSSSSSSSSSSTTDEDSSCSSDDEAAPAPTAGPS 2694
Score = 41.6 bits (96), Expect = 0.009
Identities = 25/77 (32%), Positives = 47/77 (61%)
Query: 1534 AAAQGQATPGNAGPLAPNGSAAPPAGSAFNPTSNSSSTNPAASSSASGSSVPPVSSSASA 1593
AA+ A+P ++ + + S++ + S+ + +S+SSS++ ++SSS+S SS SSS+S+
Sbjct: 2604 AASSRAASPASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2663
Query: 1594 PGISQISTTSSSGFSGS 1610
S S+T+ S S
Sbjct: 2664 SSSSSSSSTTDEDSSCS 2680
Score = 39.3 bits (90), Expect = 0.043
Identities = 35/142 (24%), Positives = 52/142 (36%), Gaps = 5/142 (3%)
Query: 1532 PPAAAQGQATPGNAGPLAPNGSAAPPAGSAFNPTSNSSSTNPAASSSASGSSVPPVSSSA 1591
PPAA G + P P A +G A G + + +P + + + SSS+
Sbjct: 2505 PPAA--GSSEPKAPWPKATDGDLAQEPGPGLTFEDSGNPKSPDKAQAEQDGAEESESSSS 2562
Query: 1592 SAPGISQISTTSSSGFSGSVG---GQNPSTGGISADRTQGNIGCGGDTDPGQSSSQPSQD 1648
S+ G S S++SSS S + G G GG + P SSS S
Sbjct: 2563 SSSGSSSSSSSSSSSGSETEGEEEGDKNGDGGCGTGGRNCSAASSRAASPASSSSSSSSS 2622
Query: 1649 GQESVTERERIGIPTEPDSADS 1670
S + + S+ S
Sbjct: 2623 SSSSSSSSSSSSSSSSSSSSSS 2644
Score = 37.7 bits (86), Expect = 0.13
Identities = 24/84 (28%), Positives = 45/84 (53%)
Query: 1536 AQGQATPGNAGPLAPNGSAAPPAGSAFNPTSNSSSTNPAASSSASGSSVPPVSSSASAPG 1595
A A+ ++ + + S++ + S+ + +S+SSS++ ++SSS+S SS SSS+S+
Sbjct: 2609 AASPASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2668
Query: 1596 ISQISTTSSSGFSGSVGGQNPSTG 1619
S + SS S P+ G
Sbjct: 2669 SSSTTDEDSSCSSDDEAAPAPTAG 2692
Score = 36.2 bits (82), Expect = 0.37
Identities = 26/138 (18%), Positives = 59/138 (42%), Gaps = 5/138 (3%)
Query: 1533 PAAAQGQATPGNAGPLAPNGSAAPPAGSAFNPTSNSSSTNPAASSSASGSSVPPVSSSAS 1592
PA++ ++ ++ + + S++ + S+ + +S+SSS++ ++SSS+S SS SSS+S
Sbjct: 2612 PASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2671
Query: 1593 APGISQISTTSSSGFSGSVGGQN-----PSTGGISADRTQGNIGCGGDTDPGQSSSQPSQ 1647
++ G + P+ A + + + G P P
Sbjct: 2672 TTDEDSSCSSDDEAAPAPTAGPSAQAALPTKATKQAGKARPSAHSPGKKTPAPQPQAPPP 2731
Query: 1648 DGQESVTERERIGIPTEP 1665
+ + + + G + P
Sbjct: 2732 QPTQPLQPKAQAGAKSRP 2749
>gi|161016767 mucin 21 [Homo sapiens]
Length = 566
Score = 48.9 bits (115), Expect = 5e-05
Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 1/119 (0%)
Query: 1540 ATPGNAGPLAPNGSAAPPAGSAFNPTSNSSSTNPAASSSASGSSVPPVSSSASAPGISQI 1599
+TP + A N ++ + A T++ SST + +S+A+ S SS AS S+
Sbjct: 291 STPSSGANTATNSESSTTSSGANTATNSDSSTTSSGASTATNSESSTTSSGASTATNSES 350
Query: 1600 STTSSSGFSGSVGGQNPSTGGIS-ADRTQGNIGCGGDTDPGQSSSQPSQDGQESVTERE 1657
STTSS + + G + ++ G S A ++ + G + S S + G + T E
Sbjct: 351 STTSSGASTATNSGSSTTSSGTSTATNSESSTVSSGASTATTSESSTTSSGASTATNSE 409
Score = 46.6 bits (109), Expect = 3e-04
Identities = 40/150 (26%), Positives = 60/150 (40%), Gaps = 9/150 (6%)
Query: 1527 PKYQTPPAAAQGQATPGNAGPLAPNGSAAPPAGSAFNPTSNSSSTNPAASSSASGSSVPP 1586
P A +T + A N ++ + A T++ SST + +S+A+ S
Sbjct: 128 PSSGASTATNSDSSTTSSGASTATNSDSSTTSSEASTATNSESSTTSSGASTATNSESST 187
Query: 1587 VSSSASAPGISQISTTSSSGFSGSVGGQNPST---GGISADRTQGNIGCGGDTDPGQSSS 1643
VSS AS S+ STT SSG S + ++ +T G + + G T SS
Sbjct: 188 VSSRASTATNSESSTT-SSGASTATNSESRTTSNGAGTATNSESSTTSSGASTATNSESS 246
Query: 1644 QPSQ-----DGQESVTERERIGIPTEPDSA 1668
PS ES T G T +S+
Sbjct: 247 TPSSGAGTATNSESSTTSSGAGTATNSESS 276
Score = 44.3 bits (103), Expect = 0.001
Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 3/120 (2%)
Query: 1540 ATPGNAGPLAPNGSAAPPAGSAFNPTSNSSSTNPAASSSASGSSVPPVSSSASAPGISQI 1599
+T + A N ++ P+ A T++ SST + +S+A+ S SS AS S+
Sbjct: 111 STTSSGASTATNSESSTPSSGASTATNSDSSTTSSGASTATNSDSSTTSSEASTATNSES 170
Query: 1600 STTSSSGFSGSVGGQNP--STGGISADRTQGNIGCGGDTDPGQSSSQPSQDGQESVTERE 1657
STT SSG S + ++ S+ +A ++ + G + S S+ + +G + T E
Sbjct: 171 STT-SSGASTATNSESSTVSSRASTATNSESSTTSSGASTATNSESRTTSNGAGTATNSE 229
Score = 43.1 bits (100), Expect = 0.003
Identities = 26/87 (29%), Positives = 43/87 (49%)
Query: 1534 AAAQGQATPGNAGPLAPNGSAAPPAGSAFNPTSNSSSTNPAASSSASGSSVPPVSSSASA 1593
A G +T + A N ++ + A T++ SST + +S+A+ S VSS AS
Sbjct: 360 ATNSGSSTTSSGTSTATNSESSTVSSGASTATTSESSTTSSGASTATNSESSTVSSGAST 419
Query: 1594 PGISQISTTSSSGFSGSVGGQNPSTGG 1620
S+ STTSS + + G + ++ G
Sbjct: 420 ATNSESSTTSSGANTATNSGSSVTSAG 446
Score = 42.0 bits (97), Expect = 0.007
Identities = 28/124 (22%), Positives = 56/124 (45%), Gaps = 4/124 (3%)
Query: 1536 AQGQATPGNAGPLAPNGSAAPPAGSAFNPTSNSSSTNPAASSSASGSSVPPVSSSASAPG 1595
++ + T AG + S+ +G++ +NS S+ P++ + + +S +SS +
Sbjct: 213 SESRTTSNGAGTATNSESSTTSSGAS--TATNSESSTPSSGAGTATNSESSTTSSGAGTA 270
Query: 1596 ISQISTTSSSGFSGSVGGQN--PSTGGISADRTQGNIGCGGDTDPGQSSSQPSQDGQESV 1653
+ S+T SSG S ++ PS+G +A ++ + G S S + G +
Sbjct: 271 TNSESSTVSSGISTVTNSESSTPSSGANTATNSESSTTSSGANTATNSDSSTTSSGASTA 330
Query: 1654 TERE 1657
T E
Sbjct: 331 TNSE 334
Score = 42.0 bits (97), Expect = 0.007
Identities = 26/125 (20%), Positives = 57/125 (45%), Gaps = 2/125 (1%)
Query: 1535 AAQGQATPGNAGPLAPNGSAAPPAGSAFNPTSNSSSTNPAASSSASGSSVPPVSSSASAP 1594
A +++ ++G S + S + +NS S+ P++ ++ + +S +SS +
Sbjct: 255 ATNSESSTTSSGAGTATNSESSTVSSGISTVTNSESSTPSSGANTATNSESSTTSSGANT 314
Query: 1595 GISQISTTSSSGFSGSVGGQNPST--GGISADRTQGNIGCGGDTDPGQSSSQPSQDGQES 1652
+ S+T+SSG S + ++ +T G +A ++ + G + S S + G +
Sbjct: 315 ATNSDSSTTSSGASTATNSESSTTSSGASTATNSESSTTSSGASTATNSGSSTTSSGTST 374
Query: 1653 VTERE 1657
T E
Sbjct: 375 ATNSE 379
Score = 41.6 bits (96), Expect = 0.009
Identities = 30/120 (25%), Positives = 54/120 (45%), Gaps = 3/120 (2%)
Query: 1540 ATPGNAGPLAPNGSAAPPAGSAFNPTSNSSSTNPAASSSASGSSVPPVSSSASAPGISQI 1599
+T + A N ++ P+ A T++ SST + + +A+ S VSS S S+
Sbjct: 231 STTSSGASTATNSESSTPSSGAGTATNSESSTTSSGAGTATNSESSTVSSGISTVTNSE- 289
Query: 1600 STTSSSGFSGSVGGQNPST--GGISADRTQGNIGCGGDTDPGQSSSQPSQDGQESVTERE 1657
S+T SSG + + ++ +T G +A + + G + S S + G + T E
Sbjct: 290 SSTPSSGANTATNSESSTTSSGANTATNSDSSTTSSGASTATNSESSTTSSGASTATNSE 349
Score = 41.6 bits (96), Expect = 0.009
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 3/112 (2%)
Query: 1540 ATPGNAGPLAPNGSAAPPAGSAFNPTSNSSSTNPAASSSASGSSVPPVSSSASAPGISQI 1599
+T + A N ++ + A T++ SST + +S+A+ S VSS AS S+
Sbjct: 336 STTSSGASTATNSESSTTSSGASTATNSGSSTTSSGTSTATNSESSTVSSGASTATTSES 395
Query: 1600 STTSSSGFSGSVGGQNP--STGGISADRTQGNIGCGGDTDPGQSSSQPSQDG 1649
STT SSG S + ++ S+G +A ++ + G S S + G
Sbjct: 396 STT-SSGASTATNSESSTVSSGASTATNSESSTTSSGANTATNSGSSVTSAG 446
Score = 40.8 bits (94), Expect = 0.015
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 1551 NGSAAPPAGSAFNPTSNSSSTNPAASSSASGSSVPPVSSSASAPGISQISTTSSSGFSGS 1610
N ++ P+ A T++ SST + +++A+ S SS AS S+ STT SSG S +
Sbjct: 287 NSESSTPSSGANTATNSESSTTSSGANTATNSDSSTTSSGASTATNSESSTT-SSGASTA 345
Query: 1611 VGGQNPST--GGISADRTQGNIGCGGDTDPGQSSSQPSQDGQESVTERE 1657
++ +T G +A + + G + S S G + T E
Sbjct: 346 TNSESSTTSSGASTATNSGSSTTSSGTSTATNSESSTVSSGASTATTSE 394
Score = 39.3 bits (90), Expect = 0.043
Identities = 29/132 (21%), Positives = 60/132 (45%), Gaps = 7/132 (5%)
Query: 1533 PAAAQGQATPGNAGPLAPNGSAAPPAGSAFNPTSNSSSTNPAASSSASGSSV-----PPV 1587
P++ AT + + + A + S+ + S++TN +S+++SG+S
Sbjct: 293 PSSGANTATNSESSTTSSGANTATNSDSSTTSSGASTATNSESSTTSSGASTATNSESST 352
Query: 1588 SSSASAPGISQISTTSSSGFSGSVGGQNP--STGGISADRTQGNIGCGGDTDPGQSSSQP 1645
+SS ++ + S+T+SSG S + ++ S+G +A ++ + G + S S
Sbjct: 353 TSSGASTATNSGSSTTSSGTSTATNSESSTVSSGASTATTSESSTTSSGASTATNSESST 412
Query: 1646 SQDGQESVTERE 1657
G + T E
Sbjct: 413 VSSGASTATNSE 424
Score = 38.5 bits (88), Expect = 0.074
Identities = 28/111 (25%), Positives = 48/111 (43%), Gaps = 1/111 (0%)
Query: 1548 LAPNGSAAPPAGSAFNPTSNSSSTNPAASSSASGSSVPPVSSSASAPGISQISTTSSSGF 1607
+A N ++ + A T++ SST + +S+A+ S SS AS S STTSS
Sbjct: 104 IATNSESSTTSSGASTATNSESSTPSSGASTATNSDSSTTSSGASTATNSDSSTTSSEAS 163
Query: 1608 SGSVG-GQNPSTGGISADRTQGNIGCGGDTDPGQSSSQPSQDGQESVTERE 1657
+ + S+G +A ++ + + S S + G + T E
Sbjct: 164 TATNSESSTTSSGASTATNSESSTVSSRASTATNSESSTTSSGASTATNSE 214
Score = 37.7 bits (86), Expect = 0.13
Identities = 29/117 (24%), Positives = 52/117 (44%), Gaps = 3/117 (2%)
Query: 1540 ATPGNAGPLAPNGSAAPPAGSAFNPTSNSSSTNPAASSSASGSSVPPVSSSASAPGISQI 1599
+TP + A N ++ + A T++ SST + S+ + S SS A+ S+
Sbjct: 246 STPSSGAGTATNSESSTTSSGAGTATNSESSTVSSGISTVTNSESSTPSSGANTATNSES 305
Query: 1600 STTSSSGFSGSVGGQNPST--GGISADRTQGNIGCGGDTDPGQSSSQPSQDGQESVT 1654
STTSS G + + + +T G +A ++ + G + S S + G + T
Sbjct: 306 STTSS-GANTATNSDSSTTSSGASTATNSESSTTSSGASTATNSESSTTSSGASTAT 361
Score = 35.4 bits (80), Expect = 0.63
Identities = 32/131 (24%), Positives = 51/131 (38%), Gaps = 9/131 (6%)
Query: 1536 AQGQATPGNAGPLAPNGSAAPPAGSAFNPTSNSSS--------TNPAASSSASGSSVPPV 1587
+ G +T N+G + + S + TSN S T + S+A+ S V
Sbjct: 39 SSGASTATNSGSSVTSSGVSTATISGSSVTSNGVSIVTNSEFHTTSSGISTATNSEFSTV 98
Query: 1588 SSSASAPGISQISTTSSSGFSGSVG-GQNPSTGGISADRTQGNIGCGGDTDPGQSSSQPS 1646
SS S S+ STTSS + + PS+G +A + + G + S S +
Sbjct: 99 SSGISIATNSESSTTSSGASTATNSESSTPSSGASTATNSDSSTTSSGASTATNSDSSTT 158
Query: 1647 QDGQESVTERE 1657
+ T E
Sbjct: 159 SSEASTATNSE 169
Score = 33.5 bits (75), Expect = 2.4
Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 9/111 (8%)
Query: 1558 AGSAFNPTSNSSSTNPAASSSASGSSVPPVSSSASAPGISQISTTSSSGFSGSVGGQNPS 1617
+G + S SS+T+ AS++ + S P S +++A S+T+SSG S + + +
Sbjct: 100 SGISIATNSESSTTSSGASTATNSESSTPSSGASTATNSD--SSTTSSGASTATNSDSST 157
Query: 1618 TGGISADRTQGNIGCGGDTDPGQSSSQPSQDGQESVTERERIGIPTEPDSA 1668
T ++ T T G S++ S ES T R T +S+
Sbjct: 158 TSSEASTATNSE---SSTTSSGASTATNS----ESSTVSSRASTATNSESS 201
Score = 32.3 bits (72), Expect = 5.3
Identities = 20/80 (25%), Positives = 38/80 (47%)
Query: 1540 ATPGNAGPLAPNGSAAPPAGSAFNPTSNSSSTNPAASSSASGSSVPPVSSSASAPGISQI 1599
AT + ++ S A + S+ + S++TN +S+ +SG+S S S++ +
Sbjct: 375 ATNSESSTVSSGASTATTSESSTTSSGASTATNSESSTVSSGASTATNSESSTTSSGANT 434
Query: 1600 STTSSSGFSGSVGGQNPSTG 1619
+T S S + + G TG
Sbjct: 435 ATNSGSSVTSAGSGTAALTG 454
Score = 31.6 bits (70), Expect = 9.0
Identities = 18/55 (32%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 1568 SSSTNPAASSSASGSSVPPVSSSASAPGISQISTTSSSGFSGSVGGQNPSTGGIS 1622
++++N ++S+ +GSSV +SS AS S S TSS + ++ G + ++ G+S
Sbjct: 21 ATNSNETSTSANTGSSV--ISSGASTATNSGSSVTSSGVSTATISGSSVTSNGVS 73
Score = 31.6 bits (70), Expect = 9.0
Identities = 32/138 (23%), Positives = 60/138 (43%), Gaps = 22/138 (15%)
Query: 1553 SAAPPAGSAFNPTSNSSSTNPAASSSASGSSVPPVS-SSASAPGISQIS-----TTS--- 1603
S + GS+ + S++TN +S ++SG S +S SS ++ G+S ++ TTS
Sbjct: 28 STSANTGSSVISSGASTATNSGSSVTSSGVSTATISGSSVTSNGVSIVTNSEFHTTSSGI 87
Query: 1604 -----------SSGFSGSVGGQNPST--GGISADRTQGNIGCGGDTDPGQSSSQPSQDGQ 1650
SSG S + ++ +T G +A ++ + G + S S + G
Sbjct: 88 STATNSEFSTVSSGISIATNSESSTTSSGASTATNSESSTPSSGASTATNSDSSTTSSGA 147
Query: 1651 ESVTERERIGIPTEPDSA 1668
+ T + +E +A
Sbjct: 148 STATNSDSSTTSSEASTA 165
>gi|7657387 CCR4-NOT transcription complex, subunit 3 [Homo sapiens]
Length = 753
Score = 48.1 bits (113), Expect = 9e-05
Identities = 56/195 (28%), Positives = 77/195 (39%), Gaps = 30/195 (15%)
Query: 1518 QLDSSLLIPPKYQT--PPAAAQGQATPGNAG---PLAPNGSAAPPAGSAFNPTSNSSSTN 1572
Q S +PP Y + PPAA+ TPGN G P AP + P A A P+ NS +
Sbjct: 312 QHPQSPAVPPTYPSGPPPAASALSTTPGNNGVPAPAAPPSALGPKASPA--PSHNSGTPA 369
Query: 1573 PAASSSA----SG--------SSVPPVSSSASAPGISQISTTSSSGFSGSVGGQNPST-- 1618
P A + A SG SV P G S++S+S G G QN +T
Sbjct: 370 PYAQAVAPPAPSGPSTTQPRPPSVQPSGGGGGGSGGGGSSSSSNSSAGGGAGKQNGATSY 429
Query: 1619 GGISADRTQ--GNIGCGGDTDPGQSSSQPS--QDGQESVTERERIGIPT-----EPDSAD 1669
+ AD GG+ Q+ PS + S ++ PT P S +
Sbjct: 430 SSVVADSPAEVALSSSGGNNASSQALGPPSGPHNPPPSTSKEPSAAAPTGAGGVAPGSGN 489
Query: 1670 SHAHPPAVVIYMVDP 1684
+ P +V V+P
Sbjct: 490 NSGGPSLLVPLPVNP 504
Score = 43.5 bits (101), Expect = 0.002
Identities = 38/121 (31%), Positives = 54/121 (44%), Gaps = 8/121 (6%)
Query: 977 AIPPKIEQLPMPPAATFIRD--GYNNVPSVGSLADPDYLNTPQMNTPVTLNSAAPASNSG 1034
A+PP P PPAA+ + G N VP+ A P L P+ + + NS PA +
Sbjct: 318 AVPPTYPSGP-PPAASALSTTPGNNGVPAPA--APPSALG-PKASPAPSHNSGTPAPYAQ 373
Query: 1035 AGVLPSPATPRFSVPTPRTPRTPRTPRGGGTASGQGSVKYDSTDQGSPASTPSTTRPLNS 1094
A P+P+ P S PR P + GGG + G GS ++ G A + +S
Sbjct: 374 AVAPPAPSGP--STTQPRPPSVQPSGGGGGGSGGGGSSSSSNSSAGGGAGKQNGATSYSS 431
Query: 1095 V 1095
V
Sbjct: 432 V 432
>gi|169173184 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1230
Score = 47.4 bits (111), Expect = 2e-04
Identities = 44/128 (34%), Positives = 64/128 (50%), Gaps = 10/128 (7%)
Query: 1534 AAAQGQATPGNAGPLAPNGSAAP-PAGSAFNPTSNSSSTNPA----ASSSASGSSVPPVS 1588
++A G +TP N+G +P+ S A P+ S + S S ++ P+ AS SAS +S+P S
Sbjct: 23 SSASGASTPSNSGWASPSASGASIPSDSGWASPSASGASTPSNSGWASFSASWASIPSDS 82
Query: 1589 SSASAPGISQISTTSSSGFS--GSVGGQNPSTGGISADRTQG-NIGCGGDTDPGQS-SSQ 1644
AS P S ST S SG++ + G PS G ++ G +I P S +S
Sbjct: 83 GWAS-PSASWASTPSDSGWASPSASGASIPSDSGWASPSVSGASIPSAFWASPSASGAST 141
Query: 1645 PSQDGQES 1652
PS G S
Sbjct: 142 PSDSGWAS 149
Score = 39.7 bits (91), Expect = 0.033
Identities = 44/154 (28%), Positives = 66/154 (42%), Gaps = 13/154 (8%)
Query: 1515 ATLQLDSSLLIPPKYQTPPAAAQGQATPGNAGPLAPNGSAAPPAGSAFNPTSNSSSTNPA 1574
A+ DS P + G A+P +G P+ A P+ S + S+S +P+
Sbjct: 92 ASTPSDSGWASPSASGASIPSDSGWASPSVSGASIPSAFWASPSASGASTPSDSGWASPS 151
Query: 1575 AS----SSASGSSVPPV-----SSSASAPGISQISTTSSSGF-SGSVGGQNPSTGGISAD 1624
AS SS SG + P S+S ++ S ST S SG+ S SV +PST S+
Sbjct: 152 ASWASTSSDSGWASPSASWTSPSASCASSSASGASTPSDSGWASPSVFWVSPSTSWASSP 211
Query: 1625 RTQGNIGCGGDTDPGQSSS---QPSQDGQESVTE 1655
G D+ SS+ PS G + ++
Sbjct: 212 SDFGWASTPSDSGWASSSASCISPSASGASTSSD 245
Score = 38.5 bits (88), Expect = 0.074
Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 17/132 (12%)
Query: 1534 AAAQGQATPGNAGPLAPNGSAAPPAGSAFNPTSNSSSTNPA------------ASSSASG 1581
++A + ++G + P+ S A + S + S+S S++P+ AS SASG
Sbjct: 274 SSASWDSITSDSGWVCPSASWASSSASWASAPSDSGSSSPSVSRASTLSVSGWASFSASG 333
Query: 1582 SSVPPVSSSASAPGISQISTTSSSGF---SGSVGGQNPSTGGISADRTQGNIGCGGDTDP 1638
+S P S ++ S +STTS SG+ S S + +G S + + G + P
Sbjct: 334 ASAPS-DSGWTSHSASGVSTTSDSGWASPSASGASTSSDSGWASPSASWASPSASGASTP 392
Query: 1639 GQSS-SQPSQDG 1649
S + PS G
Sbjct: 393 SDSGWASPSASG 404
Score = 36.2 bits (82), Expect = 0.37
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 1535 AAQGQATPGNAGPLAPNGSAAPPAGSAFNPTSNSSSTNPAASSSASGSSVPPVSSSASAP 1594
+A G +T ++G +P+ S A P+ S + S+S +P SASG+S+P S+ + P
Sbjct: 362 SASGASTSSDSGWASPSASWASPSASGASTPSDSGWASP----SASGASMP--SAPSLCP 415
Query: 1595 GISQISTTSSSGFS 1608
G T+ +GF+
Sbjct: 416 GSCFPQLTARTGFT 429
Score = 35.8 bits (81), Expect = 0.48
Identities = 35/101 (34%), Positives = 49/101 (48%), Gaps = 18/101 (17%)
Query: 1557 PAGSAFNPTSNSSSTNPA----ASSSASGSSVPPVSSSASAPGISQISTTSSSGFSGSVG 1612
P+GS + +S S ++ P+ AS SASG+S+P S AS P S ST S+SG++
Sbjct: 15 PSGSGWASSSASGASTPSNSGWASPSASGASIPSDSGWAS-PSASGASTPSNSGWASF-- 71
Query: 1613 GQNPSTGGISADRTQGNIGCGGDTDPGQS-SSQPSQDGQES 1652
+ S I +D G P S +S PS G S
Sbjct: 72 --SASWASIPSD--------SGWASPSASWASTPSDSGWAS 102
Score = 33.5 bits (75), Expect = 2.4
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 1545 AGPLAPNGSA-APPAGSAFNPTSNSSSTNPAASSSASGSSVPPVSSSASAPGISQISTTS 1603
+G P+GS A + S + SNS +P SASG+S+P S AS P S ST S
Sbjct: 10 SGVSTPSGSGWASSSASGASTPSNSGWASP----SASGASIPSDSGWAS-PSASGASTPS 64
Query: 1604 SSGFS 1608
+SG++
Sbjct: 65 NSGWA 69
Score = 33.5 bits (75), Expect = 2.4
Identities = 36/154 (23%), Positives = 58/154 (37%), Gaps = 45/154 (29%)
Query: 1540 ATPGNAGPLAPNGSAAPPAGSAFNPTSNSSSTNPA-------------------ASSSAS 1580
+TP ++G + + S P+ S + +S+S +P+ ASSSAS
Sbjct: 218 STPSDSGWASSSASCISPSASGASTSSDSGWASPSASWVSTSTSRASTSSDSGWASSSAS 277
Query: 1581 GSSV----------------------PPVSSSASAPGISQISTTSSSGFS--GSVGGQNP 1616
S+ P S +S+P +S+ ST S SG++ + G P
Sbjct: 278 WDSITSDSGWVCPSASWASSSASWASAPSDSGSSSPSVSRASTLSVSGWASFSASGASAP 337
Query: 1617 STGGISADRTQG--NIGCGGDTDPGQSSSQPSQD 1648
S G ++ G G P S + S D
Sbjct: 338 SDSGWTSHSASGVSTTSDSGWASPSASGASTSSD 371
Score = 32.3 bits (72), Expect = 5.3
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 15/90 (16%)
Query: 1535 AAQGQATPGNAGPLAPNGSAAPPAGSAFNPTSNSSSTNPAASSSASGSSVPPVSSSAS-- 1592
+A G + P ++G + + S + TS+S +P+AS +++ S S SAS
Sbjct: 330 SASGASAPSDSGWTSHSASGV-------STTSDSGWASPSASGASTSSDSGWASPSASWA 382
Query: 1593 APGISQISTTSSSGFSGSVGGQNPSTGGIS 1622
+P S ST S SG++ +PS G S
Sbjct: 383 SPSASGASTPSDSGWA------SPSASGAS 406
Score = 32.0 bits (71), Expect = 6.9
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 11/105 (10%)
Query: 1515 ATLQLDSSLLIPPKYQTPPAAAQGQATPGNAGPLAPNGSA-APPAGSAFNPTSNSSSTNP 1573
A+ DS P + + G A+ +G AP+ S + S + TS+S +P
Sbjct: 302 ASAPSDSGSSSPSVSRASTLSVSGWASFSASGASAPSDSGWTSHSASGVSTTSDSGWASP 361
Query: 1574 AAS----------SSASGSSVPPVSSSASAPGISQISTTSSSGFS 1608
+AS +S S S P +S AS P S ++ S+SG S
Sbjct: 362 SASGASTSSDSGWASPSASWASPSASGASTPSDSGWASPSASGAS 406
>gi|222418647 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 46.6 bits (109), Expect = 3e-04
Identities = 38/152 (25%), Positives = 62/152 (40%), Gaps = 4/152 (2%)
Query: 1526 PPKYQTPPAAAQGQATPGNAGPLAPNGSAAPPAGSAFNPTSNSSSTNPAASSSASGSSVP 1585
PP PP TP +A AP S+APP +A PT +++ P +SS+ ++
Sbjct: 179 PPSSSAPPETTAAPPTP-SATTQAPPSSSAPPETTAAPPTPPATTPAPPSSSAPPETTAA 237
Query: 1586 PVSSSASAPGISQIST---TSSSGFSGSVGGQNPSTGGISADRTQGNIGCGGDTDPGQSS 1642
P + SA+ P S T++ + S +PS+ + T T SS
Sbjct: 238 PPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETTAAPPTPSATTPAPPSS 297
Query: 1643 SQPSQDGQESVTERERIGIPTEPDSADSHAHP 1674
P + +T PD++++ A P
Sbjct: 298 PAPQETTAAPITTPNSSPTTLAPDTSETSAAP 329
Score = 45.4 bits (106), Expect = 6e-04
Identities = 36/131 (27%), Positives = 53/131 (40%), Gaps = 15/131 (11%)
Query: 974 PSWAIPPKIEQLPMPPAATFIRDGYNNVPSVGSLADPDYLNTPQMNTPVTLNSAAPASNS 1033
PS + PP+ P P AT ++ P + A P TP TP L+S+AP +
Sbjct: 203 PSSSAPPETTAAPPTPPATTPAPPSSSAPPETTAAPP----TPSATTPAPLSSSAPPETT 258
Query: 1034 GAGVLPSPAT--PRFSVPTPRTPRTPRTPRGGGTASGQGSVKYDSTDQGSPASTPSTTRP 1091
PS T P + P T P TP A ++T +P +TP+++
Sbjct: 259 AVPPTPSATTLDPSSASAPPETTAAPPTPSATTPAPPSSPAPQETT--AAPITTPNSS-- 314
Query: 1092 LNSVEPATMQP 1102
P T+ P
Sbjct: 315 -----PTTLAP 320
Score = 40.4 bits (93), Expect = 0.019
Identities = 56/199 (28%), Positives = 81/199 (40%), Gaps = 20/199 (10%)
Query: 921 LGSPKPEEIKDFSYVHKVPSFQPFVGSSMFAPLKMLPSHCLLPLKIPD--ACLFRPSWAI 978
L KP K + +HK +P + S P K H P K PD + + P+
Sbjct: 52 LAHQKPFIRKSYKCLHK--RCRPKLPPSPNNPPKFPNPH--QPPKHPDKNSSVVNPTLVA 107
Query: 979 PPKIEQLPMPPAATFIRDGYNNV---PSVGSLADPDYLNTPQ-MNTPVTLNSAAPASNSG 1034
+I + P A+T I N + +++ + +NT + T +NS AP +
Sbjct: 108 TTQIPSVTFPSASTKITTLPNVTFLPQNATTISSRENVNTSSSVATLAPVNSPAPQDTTA 167
Query: 1035 AGVLPS---PATPRFSVPTPRTPRTPRTPRGGGTASGQGSVKYDSTDQGSPASTPSTT-- 1089
A PS PA P S P P T P TP A S ++T +P + P+TT
Sbjct: 168 APPTPSATTPAPPSSSAP-PETTAAPPTPSATTQAPPSSSAPPETT--AAPPTPPATTPA 224
Query: 1090 RPLNSVEPAT--MQPIPEA 1106
P +S P T P P A
Sbjct: 225 PPSSSAPPETTAAPPTPSA 243
Score = 40.4 bits (93), Expect = 0.019
Identities = 43/187 (22%), Positives = 69/187 (36%), Gaps = 15/187 (8%)
Query: 1510 LAPYLATLQLDSSLLIPPKYQTPPAAAQGQATPGN-AGPLAPNGSAAPPAGSAFNPTSNS 1568
LAP + D++ P T PA A P A P P+ + P S+ P + +
Sbjct: 154 LAPVNSPAPQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTA 213
Query: 1569 SSTNPAASSSASGSSVPPVSSSASAPGISQISTTSSSGFSGSVGGQNPSTGGISADRTQG 1628
+ P A++ A SS P ++A+ P S T+ + S S P T + +
Sbjct: 214 APPTPPATTPAPPSSSAPPETTAAPP---TPSATTPAPLSSSA---PPETTAVPPTPSAT 267
Query: 1629 NIGCGGDTDPGQSSSQPSQDGQESVTERERIGIPTEPDSADSHAHPPAVVIYMVDPFTYA 1688
+ DP +S+ P P+ P ++ A P + P T A
Sbjct: 268 TL------DPSSASAPPETTAAPPTPSATTPAPPSSPAPQETTAAP--ITTPNSSPTTLA 319
Query: 1689 AEEDSTS 1695
+ TS
Sbjct: 320 PDTSETS 326
Score = 38.1 bits (87), Expect = 0.096
Identities = 33/116 (28%), Positives = 44/116 (37%), Gaps = 10/116 (8%)
Query: 975 SWAIPPKIEQLPMPPAATFIRDGYNNVPSVGSLADPDYLNTPQMNTPVTLNSAAPASNSG 1034
S + PP+ +P P+AT + + P + A P TP TP +S AP +
Sbjct: 250 SSSAPPETTAVPPTPSATTLDPSSASAPPETTAAPP----TPSATTPAPPSSPAPQETTA 305
Query: 1035 AGVLPSPATPRFSVPTPRTPRTPRTPRGGGTASGQGSVKYDSTDQGSPASTPSTTR 1090
A P T S PT P T T T SV +T P S P +
Sbjct: 306 A-----PITTPNSSPTTLAPDTSET-SAAPTHQTTTSVTTQTTTTKQPTSAPGQNK 355
Score = 35.4 bits (80), Expect = 0.63
Identities = 52/204 (25%), Positives = 69/204 (33%), Gaps = 33/204 (16%)
Query: 924 PKPEEIKDFSYVHKVPSFQPFVGSSMFAPLKMLPSHCLLPLKIPDACLFRPSWAIP--PK 981
P P F H+ P P SS+ P + + +IP S I P
Sbjct: 76 PSPNNPPKFPNPHQPPK-HPDKNSSVVNPTLVATT------QIPSVTFPSASTKITTLPN 128
Query: 982 IEQLPMPPAATFIRDGYNNVPSVGSLADPDYLN---------TPQMNTPVTLNSAAPASN 1032
+ LP R+ N SV +LA + TP TP +S+AP
Sbjct: 129 VTFLPQNATTISSRENVNTSSSVATLAPVNSPAPQDTTAAPPTPSATTPAPPSSSAPPET 188
Query: 1033 SGAGVLPSPAT---PRFSVP-----TPRTPRTPRTPRGGGTASGQGSVKYDSTDQGSPAS 1084
+ A PS T P S P P TP P T T + S T P
Sbjct: 189 TAAPPTPSATTQAPPSSSAPPETTAAPPTP--PAT-----TPAPPSSSAPPETTAAPPTP 241
Query: 1085 TPSTTRPLNSVEPATMQPIPEAHS 1108
+ +T PL+S P +P S
Sbjct: 242 SATTPAPLSSSAPPETTAVPPTPS 265
Score = 31.6 bits (70), Expect = 9.0
Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 10/75 (13%)
Query: 1527 PKYQTPPAAAQGQATPGNAGPLAPNGS-------AAPPAGSAFNPTSNSSSTNP---AAS 1576
P+ T ++ + T + LAP S AAPP SA P SSS P AA
Sbjct: 133 PQNATTISSRENVNTSSSVATLAPVNSPAPQDTTAAPPTPSATTPAPPSSSAPPETTAAP 192
Query: 1577 SSASGSSVPPVSSSA 1591
+ S ++ P SSSA
Sbjct: 193 PTPSATTQAPPSSSA 207
>gi|239755776 PREDICTED: similar to Mucin-19 [Homo sapiens]
Length = 1950
Score = 46.6 bits (109), Expect = 3e-04
Identities = 37/115 (32%), Positives = 53/115 (46%), Gaps = 8/115 (6%)
Query: 1527 PKYQTPPAAAQGQATPGNAGPLAP-NGSAAPPAGSAFNPTSNSSSTNPAASSSASGSSVP 1585
P+ A G +TPG AGP A +GS AGS T++ ++ ++ SS SG++ P
Sbjct: 1614 PRVSGATPAVGGGSTPGEAGPGATVSGSTGVSAGSI---TASPGASATSSESSKSGTTGP 1670
Query: 1586 PVSSSASAPGISQISTTSSSGFSGSVGGQNPSTGGISADRTQGNIGCGGDTDPGQ 1640
V G + TSS G SG G ST G ++ T G + PG+
Sbjct: 1671 SVGGKT---GATSSEATSSEGMSGVTGQSLGSTAGSDSEIT-AKTSFTGSSPPGK 1721
Score = 43.5 bits (101), Expect = 0.002
Identities = 35/147 (23%), Positives = 66/147 (44%), Gaps = 19/147 (12%)
Query: 1550 PNGSAAPPAGSAFNPTSNSSSTNPAASSSASG---SSVPPVSSSASA--PGISQISTTSS 1604
P+ +A+ PA + + + ++ P +G +SVP +S+S +A G+ + T +
Sbjct: 1526 PSTAASIPAITTSSSETTGTTLGPLTEPFTTGITETSVPIISTSGNAGMTGVVSPTVTGA 1585
Query: 1605 SGFSGSVGGQNPSTGGISADRTQGNIG----------CGGDTDPGQSSSQPSQDGQESVT 1654
SG +G+ GG + +T G +++ T G GG + PG++ + G V+
Sbjct: 1586 SGMAGTTGGVDAATTGAASENTSERAGTPRVSGATPAVGGGSTPGEAGPGATVSGSTGVS 1645
Query: 1655 ERERIGIP----TEPDSADSHAHPPAV 1677
P T +S+ S P+V
Sbjct: 1646 AGSITASPGASATSSESSKSGTTGPSV 1672
Score = 33.9 bits (76), Expect = 1.8
Identities = 28/120 (23%), Positives = 47/120 (39%), Gaps = 3/120 (2%)
Query: 1533 PAAAQGQATPGNAGPLAPNGSAAPPAGSAFNPTSNSSSTNPAASSSASGSSVPPVSSSAS 1592
P + G ATPG G P A ++F + S + + A P VS++++
Sbjct: 1795 PVVSPG-ATPGAPGSSTPG--EADIGNTSFGKSGKSGHDSLTVLNPAFLRRTPTVSAAST 1851
Query: 1593 APGISQISTTSSSGFSGSVGGQNPSTGGISADRTQGNIGCGGDTDPGQSSSQPSQDGQES 1652
T ++S + ++ G P T G T G G + G S+ + G+ S
Sbjct: 1852 TSSPVSKHTDAASATAVTISGSKPGTPGTPGGATSGGKITSGWSSSGTSTGSSNTPGEIS 1911
>gi|239750277 PREDICTED: hypothetical protein XP_002347351 [Homo
sapiens]
Length = 2134
Score = 46.6 bits (109), Expect = 3e-04
Identities = 37/115 (32%), Positives = 53/115 (46%), Gaps = 8/115 (6%)
Query: 1527 PKYQTPPAAAQGQATPGNAGPLAP-NGSAAPPAGSAFNPTSNSSSTNPAASSSASGSSVP 1585
P+ A G +TPG AGP A +GS AGS T++ ++ ++ SS SG++ P
Sbjct: 1798 PRVSGATPAVGGGSTPGEAGPGATVSGSTGVSAGSI---TASPGASATSSESSKSGTTGP 1854
Query: 1586 PVSSSASAPGISQISTTSSSGFSGSVGGQNPSTGGISADRTQGNIGCGGDTDPGQ 1640
V G + TSS G SG G ST G ++ T G + PG+
Sbjct: 1855 SVGGKT---GATSSEATSSEGMSGVTGQSLGSTAGSDSEIT-AKTSFTGSSPPGK 1905
Score = 43.5 bits (101), Expect = 0.002
Identities = 35/147 (23%), Positives = 66/147 (44%), Gaps = 19/147 (12%)
Query: 1550 PNGSAAPPAGSAFNPTSNSSSTNPAASSSASG---SSVPPVSSSASA--PGISQISTTSS 1604
P+ +A+ PA + + + ++ P +G +SVP +S+S +A G+ + T +
Sbjct: 1710 PSTAASIPAITTSSSETTGTTLGPLTEPFTTGITETSVPIISTSGNAGMTGVVSPTVTGA 1769
Query: 1605 SGFSGSVGGQNPSTGGISADRTQGNIG----------CGGDTDPGQSSSQPSQDGQESVT 1654
SG +G+ GG + +T G +++ T G GG + PG++ + G V+
Sbjct: 1770 SGMAGTTGGVDAATTGAASENTSERAGTPRVSGATPAVGGGSTPGEAGPGATVSGSTGVS 1829
Query: 1655 ERERIGIP----TEPDSADSHAHPPAV 1677
P T +S+ S P+V
Sbjct: 1830 AGSITASPGASATSSESSKSGTTGPSV 1856
Score = 33.9 bits (76), Expect = 1.8
Identities = 28/120 (23%), Positives = 47/120 (39%), Gaps = 3/120 (2%)
Query: 1533 PAAAQGQATPGNAGPLAPNGSAAPPAGSAFNPTSNSSSTNPAASSSASGSSVPPVSSSAS 1592
P + G ATPG G P A ++F + S + + A P VS++++
Sbjct: 1979 PVVSPG-ATPGAPGSSTPG--EADIGNTSFGKSGKSGHDSLTVLNPAFLRRTPTVSAAST 2035
Query: 1593 APGISQISTTSSSGFSGSVGGQNPSTGGISADRTQGNIGCGGDTDPGQSSSQPSQDGQES 1652
T ++S + ++ G P T G T G G + G S+ + G+ S
Sbjct: 2036 TSSPVSKHTDAASATAVTISGSKPGTPGTPGGATSGGKITSGWSSSGTSTGSSNTPGEIS 2095
>gi|239744587 PREDICTED: hypothetical protein XP_002343203 [Homo
sapiens]
Length = 2134
Score = 46.6 bits (109), Expect = 3e-04
Identities = 37/115 (32%), Positives = 53/115 (46%), Gaps = 8/115 (6%)
Query: 1527 PKYQTPPAAAQGQATPGNAGPLAP-NGSAAPPAGSAFNPTSNSSSTNPAASSSASGSSVP 1585
P+ A G +TPG AGP A +GS AGS T++ ++ ++ SS SG++ P
Sbjct: 1798 PRVSGETPAVGGGSTPGEAGPGATVSGSTGVSAGSI---TASPGASATSSESSKSGTTGP 1854
Query: 1586 PVSSSASAPGISQISTTSSSGFSGSVGGQNPSTGGISADRTQGNIGCGGDTDPGQ 1640
V G + TSS G SG G ST G ++ T G + PG+
Sbjct: 1855 SVGGKT---GATSSEATSSEGMSGVTGQSLGSTAGSDSEIT-AKTSFTGSSPPGK 1905
Score = 43.5 bits (101), Expect = 0.002
Identities = 35/147 (23%), Positives = 66/147 (44%), Gaps = 19/147 (12%)
Query: 1550 PNGSAAPPAGSAFNPTSNSSSTNPAASSSASG---SSVPPVSSSASA--PGISQISTTSS 1604
P+ +A+ PA + + + ++ P +G +SVP +S+S +A G+ + T +
Sbjct: 1710 PSTAASIPAITTSSSETTGTTLGPLTEPFTTGITETSVPIISTSGNAGMTGVVSPTVTGA 1769
Query: 1605 SGFSGSVGGQNPSTGGISADRTQGNIG----------CGGDTDPGQSSSQPSQDGQESVT 1654
SG +G+ GG + +T G +++ T G GG + PG++ + G V+
Sbjct: 1770 SGMAGTTGGVDAATTGAASENTSERAGTPRVSGETPAVGGGSTPGEAGPGATVSGSTGVS 1829
Query: 1655 ERERIGIP----TEPDSADSHAHPPAV 1677
P T +S+ S P+V
Sbjct: 1830 AGSITASPGASATSSESSKSGTTGPSV 1856
Score = 33.5 bits (75), Expect = 2.4
Identities = 28/120 (23%), Positives = 47/120 (39%), Gaps = 3/120 (2%)
Query: 1533 PAAAQGQATPGNAGPLAPNGSAAPPAGSAFNPTSNSSSTNPAASSSASGSSVPPVSSSAS 1592
P + G ATPG G P A ++F + S + + A P VS++++
Sbjct: 1979 PVVSPG-ATPGAPGSSTPG--EADIGNTSFGKSGKSGHDSLTVLNPAFLRRTPTVSAAST 2035
Query: 1593 APGISQISTTSSSGFSGSVGGQNPSTGGISADRTQGNIGCGGDTDPGQSSSQPSQDGQES 1652
T ++S + ++ G P T G T G G + G S+ + G+ S
Sbjct: 2036 TSSPVSKHTDAASATAVTISGSKPGTPGTPGGATSGGKITSGWSSSGTSTGASNTPGEIS 2095
>gi|222418649 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 46.6 bits (109), Expect = 3e-04
Identities = 38/152 (25%), Positives = 62/152 (40%), Gaps = 4/152 (2%)
Query: 1526 PPKYQTPPAAAQGQATPGNAGPLAPNGSAAPPAGSAFNPTSNSSSTNPAASSSASGSSVP 1585
PP PP TP +A AP S+APP +A PT +++ P +SS+ ++
Sbjct: 179 PPSSSAPPETTAAPPTP-SATTQAPPSSSAPPETTAAPPTPPATTPAPPSSSAPPETTAA 237
Query: 1586 PVSSSASAPGISQIST---TSSSGFSGSVGGQNPSTGGISADRTQGNIGCGGDTDPGQSS 1642
P + SA+ P S T++ + S +PS+ + T T SS
Sbjct: 238 PPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETTAAPPTPSATTPAPPSS 297
Query: 1643 SQPSQDGQESVTERERIGIPTEPDSADSHAHP 1674
P + +T PD++++ A P
Sbjct: 298 PAPQETTAAPITTPNSSPTTLAPDTSETSAAP 329
Score = 45.4 bits (106), Expect = 6e-04
Identities = 36/131 (27%), Positives = 53/131 (40%), Gaps = 15/131 (11%)
Query: 974 PSWAIPPKIEQLPMPPAATFIRDGYNNVPSVGSLADPDYLNTPQMNTPVTLNSAAPASNS 1033
PS + PP+ P P AT ++ P + A P TP TP L+S+AP +
Sbjct: 203 PSSSAPPETTAAPPTPPATTPAPPSSSAPPETTAAPP----TPSATTPAPLSSSAPPETT 258
Query: 1034 GAGVLPSPAT--PRFSVPTPRTPRTPRTPRGGGTASGQGSVKYDSTDQGSPASTPSTTRP 1091
PS T P + P T P TP A ++T +P +TP+++
Sbjct: 259 AVPPTPSATTLDPSSASAPPETTAAPPTPSATTPAPPSSPAPQETT--AAPITTPNSS-- 314
Query: 1092 LNSVEPATMQP 1102
P T+ P
Sbjct: 315 -----PTTLAP 320
Score = 40.4 bits (93), Expect = 0.019
Identities = 56/199 (28%), Positives = 81/199 (40%), Gaps = 20/199 (10%)
Query: 921 LGSPKPEEIKDFSYVHKVPSFQPFVGSSMFAPLKMLPSHCLLPLKIPD--ACLFRPSWAI 978
L KP K + +HK +P + S P K H P K PD + + P+
Sbjct: 52 LAHQKPFIRKSYKCLHK--RCRPKLPPSPNNPPKFPNPH--QPPKHPDKNSSVVNPTLVA 107
Query: 979 PPKIEQLPMPPAATFIRDGYNNV---PSVGSLADPDYLNTPQ-MNTPVTLNSAAPASNSG 1034
+I + P A+T I N + +++ + +NT + T +NS AP +
Sbjct: 108 TTQIPSVTFPSASTKITTLPNVTFLPQNATTISSRENVNTSSSVATLAPVNSPAPQDTTA 167
Query: 1035 AGVLPS---PATPRFSVPTPRTPRTPRTPRGGGTASGQGSVKYDSTDQGSPASTPSTT-- 1089
A PS PA P S P P T P TP A S ++T +P + P+TT
Sbjct: 168 APPTPSATTPAPPSSSAP-PETTAAPPTPSATTQAPPSSSAPPETT--AAPPTPPATTPA 224
Query: 1090 RPLNSVEPAT--MQPIPEA 1106
P +S P T P P A
Sbjct: 225 PPSSSAPPETTAAPPTPSA 243
Score = 40.4 bits (93), Expect = 0.019
Identities = 43/187 (22%), Positives = 69/187 (36%), Gaps = 15/187 (8%)
Query: 1510 LAPYLATLQLDSSLLIPPKYQTPPAAAQGQATPGN-AGPLAPNGSAAPPAGSAFNPTSNS 1568
LAP + D++ P T PA A P A P P+ + P S+ P + +
Sbjct: 154 LAPVNSPAPQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTA 213
Query: 1569 SSTNPAASSSASGSSVPPVSSSASAPGISQISTTSSSGFSGSVGGQNPSTGGISADRTQG 1628
+ P A++ A SS P ++A+ P S T+ + S S P T + +
Sbjct: 214 APPTPPATTPAPPSSSAPPETTAAPP---TPSATTPAPLSSSA---PPETTAVPPTPSAT 267
Query: 1629 NIGCGGDTDPGQSSSQPSQDGQESVTERERIGIPTEPDSADSHAHPPAVVIYMVDPFTYA 1688
+ DP +S+ P P+ P ++ A P + P T A
Sbjct: 268 TL------DPSSASAPPETTAAPPTPSATTPAPPSSPAPQETTAAP--ITTPNSSPTTLA 319
Query: 1689 AEEDSTS 1695
+ TS
Sbjct: 320 PDTSETS 326
Score = 38.1 bits (87), Expect = 0.096
Identities = 33/116 (28%), Positives = 44/116 (37%), Gaps = 10/116 (8%)
Query: 975 SWAIPPKIEQLPMPPAATFIRDGYNNVPSVGSLADPDYLNTPQMNTPVTLNSAAPASNSG 1034
S + PP+ +P P+AT + + P + A P TP TP +S AP +
Sbjct: 250 SSSAPPETTAVPPTPSATTLDPSSASAPPETTAAPP----TPSATTPAPPSSPAPQETTA 305
Query: 1035 AGVLPSPATPRFSVPTPRTPRTPRTPRGGGTASGQGSVKYDSTDQGSPASTPSTTR 1090
A P T S PT P T T T SV +T P S P +
Sbjct: 306 A-----PITTPNSSPTTLAPDTSET-SAAPTHQTTTSVTTQTTTTKQPTSAPGQNK 355
Score = 35.4 bits (80), Expect = 0.63
Identities = 52/204 (25%), Positives = 69/204 (33%), Gaps = 33/204 (16%)
Query: 924 PKPEEIKDFSYVHKVPSFQPFVGSSMFAPLKMLPSHCLLPLKIPDACLFRPSWAIP--PK 981
P P F H+ P P SS+ P + + +IP S I P
Sbjct: 76 PSPNNPPKFPNPHQPPK-HPDKNSSVVNPTLVATT------QIPSVTFPSASTKITTLPN 128
Query: 982 IEQLPMPPAATFIRDGYNNVPSVGSLADPDYLN---------TPQMNTPVTLNSAAPASN 1032
+ LP R+ N SV +LA + TP TP +S+AP
Sbjct: 129 VTFLPQNATTISSRENVNTSSSVATLAPVNSPAPQDTTAAPPTPSATTPAPPSSSAPPET 188
Query: 1033 SGAGVLPSPAT---PRFSVP-----TPRTPRTPRTPRGGGTASGQGSVKYDSTDQGSPAS 1084
+ A PS T P S P P TP P T T + S T P
Sbjct: 189 TAAPPTPSATTQAPPSSSAPPETTAAPPTP--PAT-----TPAPPSSSAPPETTAAPPTP 241
Query: 1085 TPSTTRPLNSVEPATMQPIPEAHS 1108
+ +T PL+S P +P S
Sbjct: 242 SATTPAPLSSSAPPETTAVPPTPS 265
Score = 31.6 bits (70), Expect = 9.0
Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 10/75 (13%)
Query: 1527 PKYQTPPAAAQGQATPGNAGPLAPNGS-------AAPPAGSAFNPTSNSSSTNP---AAS 1576
P+ T ++ + T + LAP S AAPP SA P SSS P AA
Sbjct: 133 PQNATTISSRENVNTSSSVATLAPVNSPAPQDTTAAPPTPSATTPAPPSSSAPPETTAAP 192
Query: 1577 SSASGSSVPPVSSSA 1591
+ S ++ P SSSA
Sbjct: 193 PTPSATTQAPPSSSA 207
>gi|222418645 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 46.6 bits (109), Expect = 3e-04
Identities = 38/152 (25%), Positives = 62/152 (40%), Gaps = 4/152 (2%)
Query: 1526 PPKYQTPPAAAQGQATPGNAGPLAPNGSAAPPAGSAFNPTSNSSSTNPAASSSASGSSVP 1585
PP PP TP +A AP S+APP +A PT +++ P +SS+ ++
Sbjct: 179 PPSSSAPPETTAAPPTP-SATTQAPPSSSAPPETTAAPPTPPATTPAPPSSSAPPETTAA 237
Query: 1586 PVSSSASAPGISQIST---TSSSGFSGSVGGQNPSTGGISADRTQGNIGCGGDTDPGQSS 1642
P + SA+ P S T++ + S +PS+ + T T SS
Sbjct: 238 PPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETTAAPPTPSATTPAPPSS 297
Query: 1643 SQPSQDGQESVTERERIGIPTEPDSADSHAHP 1674
P + +T PD++++ A P
Sbjct: 298 PAPQETTAAPITTPNSSPTTLAPDTSETSAAP 329
Score = 45.4 bits (106), Expect = 6e-04
Identities = 36/131 (27%), Positives = 53/131 (40%), Gaps = 15/131 (11%)
Query: 974 PSWAIPPKIEQLPMPPAATFIRDGYNNVPSVGSLADPDYLNTPQMNTPVTLNSAAPASNS 1033
PS + PP+ P P AT ++ P + A P TP TP L+S+AP +
Sbjct: 203 PSSSAPPETTAAPPTPPATTPAPPSSSAPPETTAAPP----TPSATTPAPLSSSAPPETT 258
Query: 1034 GAGVLPSPAT--PRFSVPTPRTPRTPRTPRGGGTASGQGSVKYDSTDQGSPASTPSTTRP 1091
PS T P + P T P TP A ++T +P +TP+++
Sbjct: 259 AVPPTPSATTLDPSSASAPPETTAAPPTPSATTPAPPSSPAPQETT--AAPITTPNSS-- 314
Query: 1092 LNSVEPATMQP 1102
P T+ P
Sbjct: 315 -----PTTLAP 320
Score = 40.4 bits (93), Expect = 0.019
Identities = 56/199 (28%), Positives = 81/199 (40%), Gaps = 20/199 (10%)
Query: 921 LGSPKPEEIKDFSYVHKVPSFQPFVGSSMFAPLKMLPSHCLLPLKIPD--ACLFRPSWAI 978
L KP K + +HK +P + S P K H P K PD + + P+
Sbjct: 52 LAHQKPFIRKSYKCLHK--RCRPKLPPSPNNPPKFPNPH--QPPKHPDKNSSVVNPTLVA 107
Query: 979 PPKIEQLPMPPAATFIRDGYNNV---PSVGSLADPDYLNTPQ-MNTPVTLNSAAPASNSG 1034
+I + P A+T I N + +++ + +NT + T +NS AP +
Sbjct: 108 TTQIPSVTFPSASTKITTLPNVTFLPQNATTISSRENVNTSSSVATLAPVNSPAPQDTTA 167
Query: 1035 AGVLPS---PATPRFSVPTPRTPRTPRTPRGGGTASGQGSVKYDSTDQGSPASTPSTT-- 1089
A PS PA P S P P T P TP A S ++T +P + P+TT
Sbjct: 168 APPTPSATTPAPPSSSAP-PETTAAPPTPSATTQAPPSSSAPPETT--AAPPTPPATTPA 224
Query: 1090 RPLNSVEPAT--MQPIPEA 1106
P +S P T P P A
Sbjct: 225 PPSSSAPPETTAAPPTPSA 243
Score = 40.4 bits (93), Expect = 0.019
Identities = 43/187 (22%), Positives = 69/187 (36%), Gaps = 15/187 (8%)
Query: 1510 LAPYLATLQLDSSLLIPPKYQTPPAAAQGQATPGN-AGPLAPNGSAAPPAGSAFNPTSNS 1568
LAP + D++ P T PA A P A P P+ + P S+ P + +
Sbjct: 154 LAPVNSPAPQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTA 213
Query: 1569 SSTNPAASSSASGSSVPPVSSSASAPGISQISTTSSSGFSGSVGGQNPSTGGISADRTQG 1628
+ P A++ A SS P ++A+ P S T+ + S S P T + +
Sbjct: 214 APPTPPATTPAPPSSSAPPETTAAPP---TPSATTPAPLSSSA---PPETTAVPPTPSAT 267
Query: 1629 NIGCGGDTDPGQSSSQPSQDGQESVTERERIGIPTEPDSADSHAHPPAVVIYMVDPFTYA 1688
+ DP +S+ P P+ P ++ A P + P T A
Sbjct: 268 TL------DPSSASAPPETTAAPPTPSATTPAPPSSPAPQETTAAP--ITTPNSSPTTLA 319
Query: 1689 AEEDSTS 1695
+ TS
Sbjct: 320 PDTSETS 326
Score = 38.1 bits (87), Expect = 0.096
Identities = 33/116 (28%), Positives = 44/116 (37%), Gaps = 10/116 (8%)
Query: 975 SWAIPPKIEQLPMPPAATFIRDGYNNVPSVGSLADPDYLNTPQMNTPVTLNSAAPASNSG 1034
S + PP+ +P P+AT + + P + A P TP TP +S AP +
Sbjct: 250 SSSAPPETTAVPPTPSATTLDPSSASAPPETTAAPP----TPSATTPAPPSSPAPQETTA 305
Query: 1035 AGVLPSPATPRFSVPTPRTPRTPRTPRGGGTASGQGSVKYDSTDQGSPASTPSTTR 1090
A P T S PT P T T T SV +T P S P +
Sbjct: 306 A-----PITTPNSSPTTLAPDTSET-SAAPTHQTTTSVTTQTTTTKQPTSAPGQNK 355
Score = 35.4 bits (80), Expect = 0.63
Identities = 52/204 (25%), Positives = 69/204 (33%), Gaps = 33/204 (16%)
Query: 924 PKPEEIKDFSYVHKVPSFQPFVGSSMFAPLKMLPSHCLLPLKIPDACLFRPSWAIP--PK 981
P P F H+ P P SS+ P + + +IP S I P
Sbjct: 76 PSPNNPPKFPNPHQPPK-HPDKNSSVVNPTLVATT------QIPSVTFPSASTKITTLPN 128
Query: 982 IEQLPMPPAATFIRDGYNNVPSVGSLADPDYLN---------TPQMNTPVTLNSAAPASN 1032
+ LP R+ N SV +LA + TP TP +S+AP
Sbjct: 129 VTFLPQNATTISSRENVNTSSSVATLAPVNSPAPQDTTAAPPTPSATTPAPPSSSAPPET 188
Query: 1033 SGAGVLPSPAT---PRFSVP-----TPRTPRTPRTPRGGGTASGQGSVKYDSTDQGSPAS 1084
+ A PS T P S P P TP P T T + S T P
Sbjct: 189 TAAPPTPSATTQAPPSSSAPPETTAAPPTP--PAT-----TPAPPSSSAPPETTAAPPTP 241
Query: 1085 TPSTTRPLNSVEPATMQPIPEAHS 1108
+ +T PL+S P +P S
Sbjct: 242 SATTPAPLSSSAPPETTAVPPTPS 265
Score = 31.6 bits (70), Expect = 9.0
Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 10/75 (13%)
Query: 1527 PKYQTPPAAAQGQATPGNAGPLAPNGS-------AAPPAGSAFNPTSNSSSTNP---AAS 1576
P+ T ++ + T + LAP S AAPP SA P SSS P AA
Sbjct: 133 PQNATTISSRENVNTSSSVATLAPVNSPAPQDTTAAPPTPSATTPAPPSSSAPPETTAAP 192
Query: 1577 SSASGSSVPPVSSSA 1591
+ S ++ P SSSA
Sbjct: 193 PTPSATTQAPPSSSA 207
>gi|55953110 retinoblastoma protein-binding zinc finger protein
isoform c [Homo sapiens]
Length = 1481
Score = 46.6 bits (109), Expect = 3e-04
Identities = 53/178 (29%), Positives = 76/178 (42%), Gaps = 26/178 (14%)
Query: 1511 APYLATLQLDSS----LLIPPKYQTPPAAAQGQATPGNAGPLAPNGSAAPPAGSAF---- 1562
+P L T L S LLIP +PP PL P P+ SA
Sbjct: 747 SPALQTPSLSSGQLPPLLIPTDPSSPPPCPPVLTVATPPPPLLPTVPLPAPSSSASPHPC 806
Query: 1563 -NPTSNSSSTNP----AASSSASGSSVPPVS--SSASAPG-----ISQISTTSSSGFSGS 1610
+P SN+++ +P + + S S S +PPV SA++PG S S++SSS FS S
Sbjct: 807 PSPLSNATAQSPLPILSPTVSPSPSPIPPVEPLMSAASPGPPTLSSSSSSSSSSSSFSSS 866
Query: 1611 VGGQNPSTGGISADRTQGNIGCGGDTDPGQSSSQPSQDGQESVTERERIGIPTEPDSA 1668
+PS +SA ++ GD +S P ++ E E + EP SA
Sbjct: 867 SSSSSPSPPPLSA---ISSVVSSGD---NLEASLPMISFKQEELENEGLKPREEPQSA 918
>gi|20336260 retinoblastoma protein-binding zinc finger protein
isoform b [Homo sapiens]
Length = 1682
Score = 46.6 bits (109), Expect = 3e-04
Identities = 53/178 (29%), Positives = 76/178 (42%), Gaps = 26/178 (14%)
Query: 1511 APYLATLQLDSS----LLIPPKYQTPPAAAQGQATPGNAGPLAPNGSAAPPAGSAF---- 1562
+P L T L S LLIP +PP PL P P+ SA
Sbjct: 948 SPALQTPSLSSGQLPPLLIPTDPSSPPPCPPVLTVATPPPPLLPTVPLPAPSSSASPHPC 1007
Query: 1563 -NPTSNSSSTNP----AASSSASGSSVPPVS--SSASAPG-----ISQISTTSSSGFSGS 1610
+P SN+++ +P + + S S S +PPV SA++PG S S++SSS FS S
Sbjct: 1008 PSPLSNATAQSPLPILSPTVSPSPSPIPPVEPLMSAASPGPPTLSSSSSSSSSSSSFSSS 1067
Query: 1611 VGGQNPSTGGISADRTQGNIGCGGDTDPGQSSSQPSQDGQESVTERERIGIPTEPDSA 1668
+PS +SA ++ GD +S P ++ E E + EP SA
Sbjct: 1068 SSSSSPSPPPLSA---ISSVVSSGD---NLEASLPMISFKQEELENEGLKPREEPQSA 1119
>gi|20336258 retinoblastoma protein-binding zinc finger protein
isoform a [Homo sapiens]
Length = 1718
Score = 46.6 bits (109), Expect = 3e-04
Identities = 53/178 (29%), Positives = 76/178 (42%), Gaps = 26/178 (14%)
Query: 1511 APYLATLQLDSS----LLIPPKYQTPPAAAQGQATPGNAGPLAPNGSAAPPAGSAF---- 1562
+P L T L S LLIP +PP PL P P+ SA
Sbjct: 948 SPALQTPSLSSGQLPPLLIPTDPSSPPPCPPVLTVATPPPPLLPTVPLPAPSSSASPHPC 1007
Query: 1563 -NPTSNSSSTNP----AASSSASGSSVPPVS--SSASAPG-----ISQISTTSSSGFSGS 1610
+P SN+++ +P + + S S S +PPV SA++PG S S++SSS FS S
Sbjct: 1008 PSPLSNATAQSPLPILSPTVSPSPSPIPPVEPLMSAASPGPPTLSSSSSSSSSSSSFSSS 1067
Query: 1611 VGGQNPSTGGISADRTQGNIGCGGDTDPGQSSSQPSQDGQESVTERERIGIPTEPDSA 1668
+PS +SA ++ GD +S P ++ E E + EP SA
Sbjct: 1068 SSSSSPSPPPLSA---ISSVVSSGD---NLEASLPMISFKQEELENEGLKPREEPQSA 1119
>gi|20070107 orthodenticle homeobox 1 [Homo sapiens]
Length = 354
Score = 46.2 bits (108), Expect = 4e-04
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 1/114 (0%)
Query: 1531 TPPAAAQGQATPGNAGPLAPNGSAAPPAGSAFNPTSNSSS-TNPAASSSASGSSVPPVSS 1589
TPPA + ++ +A + N +AA AG NP + +SS + PAASS S +S+ P S+
Sbjct: 128 TPPAVSSSASSSSSASSSSANPAAAAAAGLGGNPVAAASSLSTPAASSIWSPASISPGSA 187
Query: 1590 SASAPGISQISTTSSSGFSGSVGGQNPSTGGISADRTQGNIGCGGDTDPGQSSS 1643
AS ++ S++ +T S + G G G P SSS
Sbjct: 188 PASVSVPEPLAAPSNTSCMQRSVAAGAATAAASYPMSYGQGGSYGQGYPTPSSS 241
>gi|28559039 mediator complex subunit 1 [Homo sapiens]
Length = 1581
Score = 45.8 bits (107), Expect = 5e-04
Identities = 45/177 (25%), Positives = 75/177 (42%), Gaps = 41/177 (23%)
Query: 1531 TPPAAAQGQATPGNAG-PLAPNGSAAPP--------------------------AGSAFN 1563
TPP + G +PG+AG P G A PP +GS +
Sbjct: 1032 TPPTSTGGSKSPGSAGRSQTPPGVATPPIPKITIQIPKGTVMVGKPSSHSQYTSSGSVSS 1091
Query: 1564 PTSNSSSTNPAASSSASGSSVPPVSSSASAPGISQISTT--SSSGFSGSVGGQNPSTGG- 1620
S S ++ ++SSS++ +S SS + S++S++ SS G SGS +N S G
Sbjct: 1092 SGSKSHHSHSSSSSSSASTSGKMKSSKSEGSSSSKLSSSMYSSQGSSGSSQSKNSSQSGG 1151
Query: 1621 --ISADRTQGNIGCGGDTDPGQSSSQPSQDGQESVTERERIGIPTEPDSADSHAHPP 1675
S+ T+ + G + + +PS S+ ++P+ + SH+ PP
Sbjct: 1152 KPGSSPITKHGLSSGSSSTKMKPQGKPSSLMNPSL---------SKPNISPSHSRPP 1199
Score = 41.6 bits (96), Expect = 0.009
Identities = 42/142 (29%), Positives = 60/142 (42%), Gaps = 19/142 (13%)
Query: 1525 IPPKYQTPPAAAQGQATPGNAGPLAPNGSAAPP---AGSAFNPTSNSSSTNPAASSSASG 1581
I P + PP + A+P P P S A +GS + S +SS++ SSS G
Sbjct: 1191 ISPSHSRPPGGSDKLASPMKPVPGTPPSSKAKSPISSGSGGSHMSGTSSSSGMKSSSGLG 1250
Query: 1582 SSVPPVSSSASAPGISQISTTSSSGFSGSVGGQNPSTGGISADRTQGNIGCGGDTDPGQS 1641
SS S S P S T SSS FS S G S +Q G + G+S
Sbjct: 1251 SSG---SLSQKTPPSSNSCTASSSSFSSS---------GSSMSSSQNQHG----SSKGKS 1294
Query: 1642 SSQPSQDGQESVTERERIGIPT 1663
S+ + +V ++ + G+ T
Sbjct: 1295 PSRNKKPSLTAVIDKLKHGVVT 1316
>gi|87239981 tankyrase, TRF1-interacting ankyrin-related ADP-ribose
polymerase [Homo sapiens]
Length = 1327
Score = 45.8 bits (107), Expect = 5e-04
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 1545 AGPLAPNGSAAPPAGSAFNPTSNSSSTNPAASSSASGSSVPPVSSSASAPGISQISTTSS 1604
A P+ P S + AG A NP + S+ +P++SSS + SS SSS S+PG S + +
Sbjct: 101 AAPVVPAVSTSSAAGVAPNPAGSGSNNSPSSSSSPTSSS----SSSPSSPGSSLAESPEA 156
Query: 1605 SGFSGSV----GGQNPSTG 1619
+G S + G P TG
Sbjct: 157 AGVSSTAPLGPGAAGPGTG 175
Score = 43.1 bits (100), Expect = 0.003
Identities = 48/185 (25%), Positives = 71/185 (38%), Gaps = 27/185 (14%)
Query: 1507 RHHLAPYLATLQLDSSLLIPPKYQTPP-----AAAQGQATPGNAGPLAP-----NGSAAP 1556
+HH + LQ PP PP A A+P +G LAP +G A P
Sbjct: 8 QHHHHHHQQQLQPAPGASAPPPPPPPPLSPGLAPGTTPASPTASG-LAPFASPRHGLALP 66
Query: 1557 PAGSAFNPTSNSSSTNPAASSSASGSSVPPVSSSASAPGISQISTTSSSGFSGSVGGQNP 1616
+ +P S +P +S S+ + + A+AP + +ST+S++G + NP
Sbjct: 67 EGDGSRDPPDRPRSPDPVDGTSCC-STTSTICTVAAAPVVPAVSTSSAAGVA-----PNP 120
Query: 1617 STGGISADRTQGNIGCGGDTDPGQSSSQPSQDGQESVTERERIGI----PTEPDSADSHA 1672
+ G N + SSS PS G E G+ P P +A
Sbjct: 121 AGSG------SNNSPSSSSSPTSSSSSSPSSPGSSLAESPEAAGVSSTAPLGPGAAGPGT 174
Query: 1673 HPPAV 1677
PAV
Sbjct: 175 GVPAV 179
>gi|186928829 dermokine isoform 4 precursor [Homo sapiens]
Length = 386
Score = 45.4 bits (106), Expect = 6e-04
Identities = 39/127 (30%), Positives = 46/127 (36%), Gaps = 5/127 (3%)
Query: 1530 QTPPAAAQGQATPGNAGPLAPNGSAAPPAGSAFNPTSNSSSTNPAASSSASGSS----VP 1585
Q P G P N G A P GS N TNP S S GSS
Sbjct: 189 QGAPWGQGGNGGPPNFGTNTQGAVAQPGYGSVRASNQNEGCTNPPPSGSGGGSSNSGGGS 248
Query: 1586 PVSSSASAPGISQISTTSSSGFSGSVGGQNPSTGGISADRTQGNIGCGGDTDPGQSSSQP 1645
S +S G + + SS S G + + G S+ + GN G G D G SS
Sbjct: 249 GSQSGSSGSGSNGDNNNGSSSGGSSSGSSSGGSSGGSSGGSSGNSG-GSRGDSGSESSWG 307
Query: 1646 SQDGQES 1652
S G S
Sbjct: 308 SSTGSSS 314
Score = 40.8 bits (94), Expect = 0.015
Identities = 36/136 (26%), Positives = 58/136 (42%), Gaps = 9/136 (6%)
Query: 1526 PPKYQTPPAAAQGQATPGNAGPLAPNGSAA----PPAGSAFNPTSNSSSTNPAASSSASG 1581
PP + T A Q PG A N + PP+GS +++ + + SS SG
Sbjct: 201 PPNFGTNTQGAVAQ--PGYGSVRASNQNEGCTNPPPSGSGGGSSNSGGGSGSQSGSSGSG 258
Query: 1582 SSVPPVSSSASAPGISQISTTSSSGFSGSVGGQNPSTGGISADR-TQGNIGCGGDTDPGQ 1640
S+ + S+S S S+ SSG GS GG + ++GG D ++ + G + G
Sbjct: 259 SNGDNNNGSSSGGSSSGSSSGGSSG--GSSGGSSGNSGGSRGDSGSESSWGSSTGSSSGN 316
Query: 1641 SSSQPSQDGQESVTER 1656
+G + E+
Sbjct: 317 HGGSGGGNGHKPGCEK 332
>gi|186928827 dermokine isoform 5 precursor [Homo sapiens]
Length = 398
Score = 45.4 bits (106), Expect = 6e-04
Identities = 39/127 (30%), Positives = 46/127 (36%), Gaps = 5/127 (3%)
Query: 1530 QTPPAAAQGQATPGNAGPLAPNGSAAPPAGSAFNPTSNSSSTNPAASSSASGSS----VP 1585
Q P G P N G A P GS N TNP S S GSS
Sbjct: 189 QGAPWGQGGNGGPPNFGTNTQGAVAQPGYGSVRASNQNEGCTNPPPSGSGGGSSNSGGGS 248
Query: 1586 PVSSSASAPGISQISTTSSSGFSGSVGGQNPSTGGISADRTQGNIGCGGDTDPGQSSSQP 1645
S +S G + + SS S G + + G S+ + GN G G D G SS
Sbjct: 249 GSQSGSSGSGSNGDNNNGSSSGGSSSGSSSGGSSGGSSGGSSGNSG-GSRGDSGSESSWG 307
Query: 1646 SQDGQES 1652
S G S
Sbjct: 308 SSTGSSS 314
Score = 40.8 bits (94), Expect = 0.015
Identities = 36/136 (26%), Positives = 58/136 (42%), Gaps = 9/136 (6%)
Query: 1526 PPKYQTPPAAAQGQATPGNAGPLAPNGSAA----PPAGSAFNPTSNSSSTNPAASSSASG 1581
PP + T A Q PG A N + PP+GS +++ + + SS SG
Sbjct: 201 PPNFGTNTQGAVAQ--PGYGSVRASNQNEGCTNPPPSGSGGGSSNSGGGSGSQSGSSGSG 258
Query: 1582 SSVPPVSSSASAPGISQISTTSSSGFSGSVGGQNPSTGGISADR-TQGNIGCGGDTDPGQ 1640
S+ + S+S S S+ SSG GS GG + ++GG D ++ + G + G
Sbjct: 259 SNGDNNNGSSSGGSSSGSSSGGSSG--GSSGGSSGNSGGSRGDSGSESSWGSSTGSSSGN 316
Query: 1641 SSSQPSQDGQESVTER 1656
+G + E+
Sbjct: 317 HGGSGGGNGHKPGCEK 332
Score = 36.2 bits (82), Expect = 0.37
Identities = 29/121 (23%), Positives = 51/121 (42%), Gaps = 13/121 (10%)
Query: 1532 PPAAAQGQATPGNAGPLAPNGSAAPPAGSAFNPTSNSSSTNPAASSSASGSSVPPVSSSA 1591
PP+ + G ++ G +GS + +GS N +N+ S++ +SS SSS
Sbjct: 233 PPSGSGGGSSNSGGG----SGSQSGSSGSGSNGDNNNGSSSGGSSSG---------SSSG 279
Query: 1592 SAPGISQISTTSSSGFSGSVGGQNPSTGGISADRTQGNIGCGGDTDPGQSSSQPSQDGQE 1651
+ G S ++ +SG S G S G + + + G GG +P + +
Sbjct: 280 GSSGGSSGGSSGNSGGSRGDSGSESSWGSSTGSSSGNHGGSGGGNGHKPGCEKPGNEARG 339
Query: 1652 S 1652
S
Sbjct: 340 S 340
>gi|186928825 dermokine isoform 3 precursor [Homo sapiens]
Length = 416
Score = 45.4 bits (106), Expect = 6e-04
Identities = 39/127 (30%), Positives = 46/127 (36%), Gaps = 5/127 (3%)
Query: 1530 QTPPAAAQGQATPGNAGPLAPNGSAAPPAGSAFNPTSNSSSTNPAASSSASGSS----VP 1585
Q P G P N G A P GS N TNP S S GSS
Sbjct: 189 QGAPWGQGGNGGPPNFGTNTQGAVAQPGYGSVRASNQNEGCTNPPPSGSGGGSSNSGGGS 248
Query: 1586 PVSSSASAPGISQISTTSSSGFSGSVGGQNPSTGGISADRTQGNIGCGGDTDPGQSSSQP 1645
S +S G + + SS S G + + G S+ + GN G G D G SS
Sbjct: 249 GSQSGSSGSGSNGDNNNGSSSGGSSSGSSSGGSSGGSSGGSSGNSG-GSRGDSGSESSWG 307
Query: 1646 SQDGQES 1652
S G S
Sbjct: 308 SSTGSSS 314
Score = 40.8 bits (94), Expect = 0.015
Identities = 36/136 (26%), Positives = 58/136 (42%), Gaps = 9/136 (6%)
Query: 1526 PPKYQTPPAAAQGQATPGNAGPLAPNGSAA----PPAGSAFNPTSNSSSTNPAASSSASG 1581
PP + T A Q PG A N + PP+GS +++ + + SS SG
Sbjct: 201 PPNFGTNTQGAVAQ--PGYGSVRASNQNEGCTNPPPSGSGGGSSNSGGGSGSQSGSSGSG 258
Query: 1582 SSVPPVSSSASAPGISQISTTSSSGFSGSVGGQNPSTGGISADR-TQGNIGCGGDTDPGQ 1640
S+ + S+S S S+ SSG GS GG + ++GG D ++ + G + G
Sbjct: 259 SNGDNNNGSSSGGSSSGSSSGGSSG--GSSGGSSGNSGGSRGDSGSESSWGSSTGSSSGN 316
Query: 1641 SSSQPSQDGQESVTER 1656
+G + E+
Sbjct: 317 HGGSGGGNGHKPGCEK 332
Score = 36.2 bits (82), Expect = 0.37
Identities = 29/121 (23%), Positives = 51/121 (42%), Gaps = 13/121 (10%)
Query: 1532 PPAAAQGQATPGNAGPLAPNGSAAPPAGSAFNPTSNSSSTNPAASSSASGSSVPPVSSSA 1591
PP+ + G ++ G +GS + +GS N +N+ S++ +SS SSS
Sbjct: 233 PPSGSGGGSSNSGGG----SGSQSGSSGSGSNGDNNNGSSSGGSSSG---------SSSG 279
Query: 1592 SAPGISQISTTSSSGFSGSVGGQNPSTGGISADRTQGNIGCGGDTDPGQSSSQPSQDGQE 1651
+ G S ++ +SG S G S G + + + G GG +P + +
Sbjct: 280 GSSGGSSGGSSGNSGGSRGDSGSESSWGSSTGSSSGNHGGSGGGNGHKPGCEKPGNEARG 339
Query: 1652 S 1652
S
Sbjct: 340 S 340
>gi|33504489 dermokine isoform 2 precursor [Homo sapiens]
Length = 476
Score = 45.4 bits (106), Expect = 6e-04
Identities = 39/127 (30%), Positives = 46/127 (36%), Gaps = 5/127 (3%)
Query: 1530 QTPPAAAQGQATPGNAGPLAPNGSAAPPAGSAFNPTSNSSSTNPAASSSASGSS----VP 1585
Q P G P N G A P GS N TNP S S GSS
Sbjct: 189 QGAPWGQGGNGGPPNFGTNTQGAVAQPGYGSVRASNQNEGCTNPPPSGSGGGSSNSGGGS 248
Query: 1586 PVSSSASAPGISQISTTSSSGFSGSVGGQNPSTGGISADRTQGNIGCGGDTDPGQSSSQP 1645
S +S G + + SS S G + + G S+ + GN G G D G SS
Sbjct: 249 GSQSGSSGSGSNGDNNNGSSSGGSSSGSSSGGSSGGSSGGSSGNSG-GSRGDSGSESSWG 307
Query: 1646 SQDGQES 1652
S G S
Sbjct: 308 SSTGSSS 314
Score = 40.8 bits (94), Expect = 0.015
Identities = 36/136 (26%), Positives = 58/136 (42%), Gaps = 9/136 (6%)
Query: 1526 PPKYQTPPAAAQGQATPGNAGPLAPNGSAA----PPAGSAFNPTSNSSSTNPAASSSASG 1581
PP + T A Q PG A N + PP+GS +++ + + SS SG
Sbjct: 201 PPNFGTNTQGAVAQ--PGYGSVRASNQNEGCTNPPPSGSGGGSSNSGGGSGSQSGSSGSG 258
Query: 1582 SSVPPVSSSASAPGISQISTTSSSGFSGSVGGQNPSTGGISADR-TQGNIGCGGDTDPGQ 1640
S+ + S+S S S+ SSG GS GG + ++GG D ++ + G + G
Sbjct: 259 SNGDNNNGSSSGGSSSGSSSGGSSG--GSSGGSSGNSGGSRGDSGSESSWGSSTGSSSGN 316
Query: 1641 SSSQPSQDGQESVTER 1656
+G + E+
Sbjct: 317 HGGSGGGNGHKPGCEK 332
>gi|217416332 trinucleotide repeat containing 6C isoform 1 [Homo
sapiens]
Length = 1726
Score = 44.7 bits (104), Expect = 0.001
Identities = 45/148 (30%), Positives = 66/148 (44%), Gaps = 23/148 (15%)
Query: 1527 PKYQTPPAAAQGQ-----ATPGNAGPLAPNGSAAPPAGSAFNPTSNSSSTNPAAS---SS 1578
P+ T P + Q A P N PN + P S+ NP N+ TN + +
Sbjct: 156 PQESTEPQTSTSQNVSFSAQPQNLNTDGPNNTN--PMNSSPNPI-NAMQTNGLPNWGMAV 212
Query: 1579 ASGSSVPPVSSS---ASAPGISQISTTSSSGFSGSVGGQ---NPSTGGISADRTQGNIGC 1632
G+ +PP A+ +SQ+S S+ G S SV G NP+TG ++ +QGN
Sbjct: 213 GMGAIIPPHLQGLPGANGSSVSQVSGGSAEGISNSVWGLSPGNPATGNSNSGFSQGN--- 269
Query: 1633 GGDTDPGQSSSQPSQDGQESVTERERIG 1660
GDT S+ Q+G S ++E G
Sbjct: 270 -GDT--VNSALSAKQNGSSSAVQKEGSG 294
>gi|33413425 trinucleotide repeat containing 6C isoform 2 [Homo
sapiens]
Length = 1690
Score = 44.7 bits (104), Expect = 0.001
Identities = 45/148 (30%), Positives = 66/148 (44%), Gaps = 23/148 (15%)
Query: 1527 PKYQTPPAAAQGQ-----ATPGNAGPLAPNGSAAPPAGSAFNPTSNSSSTNPAAS---SS 1578
P+ T P + Q A P N PN + P S+ NP N+ TN + +
Sbjct: 156 PQESTEPQTSTSQNVSFSAQPQNLNTDGPNNTN--PMNSSPNPI-NAMQTNGLPNWGMAV 212
Query: 1579 ASGSSVPPVSSS---ASAPGISQISTTSSSGFSGSVGGQ---NPSTGGISADRTQGNIGC 1632
G+ +PP A+ +SQ+S S+ G S SV G NP+TG ++ +QGN
Sbjct: 213 GMGAIIPPHLQGLPGANGSSVSQVSGGSAEGISNSVWGLSPGNPATGNSNSGFSQGN--- 269
Query: 1633 GGDTDPGQSSSQPSQDGQESVTERERIG 1660
GDT S+ Q+G S ++E G
Sbjct: 270 -GDT--VNSALSAKQNGSSSAVQKEGSG 294
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 44.3 bits (103), Expect = 0.001
Identities = 42/137 (30%), Positives = 56/137 (40%), Gaps = 24/137 (17%)
Query: 979 PPKIEQLPMPPAATFIRDGYNNVPSVGSLADPDYLNTPQMNTPVTLNSAAPASNSGAGVL 1038
PP+ ++ MPP P VGS PD + P +TP + S S G
Sbjct: 161 PPEPQRNRMPPPR----------PDVGS--KPDSIPPPVPSTPRPIQS----SPHNRGSP 204
Query: 1039 PSPATPRFSVPTPRTPRTPRTPRGGGTASGQGSVKYDSTDQGSPAST-----PSTTRPLN 1093
P P PR P P TP P P GTA G GS++ SP S P+ +R L+
Sbjct: 205 PVPGGPRQPSPGP-TP--PPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALD 261
Query: 1094 SVEPATMQPIPEAHSLY 1110
P P+ S++
Sbjct: 262 DKPPPPPPPVGNRPSIH 278
Score = 40.0 bits (92), Expect = 0.025
Identities = 43/158 (27%), Positives = 54/158 (34%), Gaps = 25/158 (15%)
Query: 1526 PPKYQTPPAAAQGQATPGNAGPLAPNGSAAPPAGSAFNPT--------SNSSSTNPAASS 1577
PP TP +A QA P P P PP+ S + T S SSST P S
Sbjct: 292 PPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSP 351
Query: 1578 SASGSSVPPVSSSASAPGISQISTTSSSGFSGSVGGQNPSTGGISADRTQGNIGCGGDTD 1637
SG PP S P G SG + P + S R
Sbjct: 352 GRSGPLPPPPSERPPPP------VRDPPGRSGPLPPPPPVSRNGSTSRAL---------- 395
Query: 1638 PGQSSSQPSQDGQESVTERERIGIPTEPDSADSHAHPP 1675
+ PS+ G +S R +P + SA + PP
Sbjct: 396 -PATPQLPSRSGVDSPRSGPRPPLPPDRPSAGAPPPPP 432
Score = 35.8 bits (81), Expect = 0.48
Identities = 31/98 (31%), Positives = 39/98 (39%), Gaps = 15/98 (15%)
Query: 1521 SSLLIPPKYQTPPAAAQGQATPGNAGPLAPNGSAAPPAGSAFNPTSNSSSTNPAASSSAS 1580
S L PP + PP + PG +GPL P PP S TS + P S +
Sbjct: 354 SGPLPPPPSERPPPPVRDP--PGRSGPLPP-----PPPVSRNGSTSRALPATPQLPSRSG 406
Query: 1581 GSS--------VPPVSSSASAPGISQISTTSSSGFSGS 1610
S +PP SA AP ST+ +GF S
Sbjct: 407 VDSPRSGPRPPLPPDRPSAGAPPPPPPSTSIRNGFQDS 444
Score = 32.7 bits (73), Expect = 4.1
Identities = 37/149 (24%), Positives = 53/149 (35%), Gaps = 8/149 (5%)
Query: 439 NRPPTVSQPGFSAGPSSSSSLPPPASSKHKTAERQEKGDKLQKRPLIPFHHRPSVAEELC 498
NRPP P + PP + E +P +P RPS + +
Sbjct: 248 NRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAP 307
Query: 499 MEQDTPGQKLGLAGIDSSLEVSSSRKYDKQMAVPSRNTSKQMNLNPMDSP-HSPISPLPP 557
P + L SSS D+ +P RN S + P+ SP S P PP
Sbjct: 308 PPPPPPSRPG-----PPPLPPSSSGN-DETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPP 361
Query: 558 TLSPQPRGQETESLDPPSVPVNPALYGNG 586
+ P P ++ P +P P + NG
Sbjct: 362 SERPPPPVRDPPGRSGP-LPPPPPVSRNG 389
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 44.3 bits (103), Expect = 0.001
Identities = 42/137 (30%), Positives = 56/137 (40%), Gaps = 24/137 (17%)
Query: 979 PPKIEQLPMPPAATFIRDGYNNVPSVGSLADPDYLNTPQMNTPVTLNSAAPASNSGAGVL 1038
PP+ ++ MPP P VGS PD + P +TP + S S G
Sbjct: 161 PPEPQRNRMPPPR----------PDVGS--KPDSIPPPVPSTPRPIQS----SPHNRGSP 204
Query: 1039 PSPATPRFSVPTPRTPRTPRTPRGGGTASGQGSVKYDSTDQGSPAST-----PSTTRPLN 1093
P P PR P P TP P P GTA G GS++ SP S P+ +R L+
Sbjct: 205 PVPGGPRQPSPGP-TP--PPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALD 261
Query: 1094 SVEPATMQPIPEAHSLY 1110
P P+ S++
Sbjct: 262 DKPPPPPPPVGNRPSIH 278
Score = 40.0 bits (92), Expect = 0.025
Identities = 43/158 (27%), Positives = 54/158 (34%), Gaps = 25/158 (15%)
Query: 1526 PPKYQTPPAAAQGQATPGNAGPLAPNGSAAPPAGSAFNPT--------SNSSSTNPAASS 1577
PP TP +A QA P P P PP+ S + T S SSST P S
Sbjct: 292 PPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSP 351
Query: 1578 SASGSSVPPVSSSASAPGISQISTTSSSGFSGSVGGQNPSTGGISADRTQGNIGCGGDTD 1637
SG PP S P G SG + P + S R
Sbjct: 352 GRSGPLPPPPSERPPPP------VRDPPGRSGPLPPPPPVSRNGSTSRAL---------- 395
Query: 1638 PGQSSSQPSQDGQESVTERERIGIPTEPDSADSHAHPP 1675
+ PS+ G +S R +P + SA + PP
Sbjct: 396 -PATPQLPSRSGVDSPRSGPRPPLPPDRPSAGAPPPPP 432
Score = 35.8 bits (81), Expect = 0.48
Identities = 31/98 (31%), Positives = 39/98 (39%), Gaps = 15/98 (15%)
Query: 1521 SSLLIPPKYQTPPAAAQGQATPGNAGPLAPNGSAAPPAGSAFNPTSNSSSTNPAASSSAS 1580
S L PP + PP + PG +GPL P PP S TS + P S +
Sbjct: 354 SGPLPPPPSERPPPPVRDP--PGRSGPLPP-----PPPVSRNGSTSRALPATPQLPSRSG 406
Query: 1581 GSS--------VPPVSSSASAPGISQISTTSSSGFSGS 1610
S +PP SA AP ST+ +GF S
Sbjct: 407 VDSPRSGPRPPLPPDRPSAGAPPPPPPSTSIRNGFQDS 444
Score = 32.7 bits (73), Expect = 4.1
Identities = 37/149 (24%), Positives = 53/149 (35%), Gaps = 8/149 (5%)
Query: 439 NRPPTVSQPGFSAGPSSSSSLPPPASSKHKTAERQEKGDKLQKRPLIPFHHRPSVAEELC 498
NRPP P + PP + E +P +P RPS + +
Sbjct: 248 NRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAP 307
Query: 499 MEQDTPGQKLGLAGIDSSLEVSSSRKYDKQMAVPSRNTSKQMNLNPMDSP-HSPISPLPP 557
P + L SSS D+ +P RN S + P+ SP S P PP
Sbjct: 308 PPPPPPSRPG-----PPPLPPSSSGN-DETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPP 361
Query: 558 TLSPQPRGQETESLDPPSVPVNPALYGNG 586
+ P P ++ P +P P + NG
Sbjct: 362 SERPPPPVRDPPGRSGP-LPPPPPVSRNG 389
>gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]
Length = 2285
Score = 44.3 bits (103), Expect = 0.001
Identities = 39/115 (33%), Positives = 55/115 (47%), Gaps = 14/115 (12%)
Query: 1511 APYLATLQLDSSLLIPPKYQTPPAAAQGQATPGNA-GPLAPNGSAAPPAGSAFNPTSNSS 1569
+P LA LQ + P Y P + P + PN SA PP A+ +S
Sbjct: 178 SPGLAALQSGGGGGLEP-YAGPQQNSHDHGFPNHQYNSYYPNRSAYPPPAPAYALSSPRG 236
Query: 1570 STNPAASSSASGSSVPPVSSSASAPGISQISTTSSSGFS----GSVGGQNPSTGG 1620
T + +++A+GS PP SSSASA ++SSS F+ G++GG PS G
Sbjct: 237 GTPGSGAAAAAGSKPPP-SSSASA-------SSSSSSFAQQRFGAMGGGGPSAAG 283
Score = 34.7 bits (78), Expect = 1.1
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 11/97 (11%)
Query: 986 PMPPAATFIRDGYNNVPSVGSLADPDYLNTPQMNTPVTLNSAAPASNSGAGVLPSPATPR 1045
P+ PAA N +P D + P MN ++ A + G + +P P+
Sbjct: 713 PLSPAAV----PGNQMPPRPPSGQSDSIMHPSMN------QSSIAQDRGY-MQRNPQMPQ 761
Query: 1046 FSVPTPRTPRTPRTPRGGGTASGQGSVKYDSTDQGSP 1082
+S P P + +PR P GG +G GS + +S P
Sbjct: 762 YSSPQPGSALSPRQPSGGQIHTGMGSYQQNSMGSYGP 798
Score = 31.6 bits (70), Expect = 9.0
Identities = 56/267 (20%), Positives = 90/267 (33%), Gaps = 38/267 (14%)
Query: 395 QMSTPTLEEEPASNPATWDFVDPTQRVSCSCSRHKLLKRCAVGPNRPPTVSQPGFSAGPS 454
Q S P ++ PA P+ + S+ + A P + QP S
Sbjct: 521 QPSQPPHQQSPAPYPSQQSTTQQHPQSQPPYSQPQ-----AQSPYQQQQPQQPAPSTLSQ 575
Query: 455 SSSSLPPPASSKHKTAERQEKGDKLQKRPLIPFHHRPSVAEELCME-----------QDT 503
++ P + +TA Q++ Q+ F + S A + Q
Sbjct: 576 QAAYPQPQSQQSQQTAYSQQRFPPPQELSQDSFGSQASSAPSMTSSKGGQEDMNLSLQSR 635
Query: 504 PGQKLGLAGIDSSLEVSSSRKYDKQMAVPSRNTSKQMNLNPMDSPHSP-ISPLPPTL--- 559
P L+G L + + ++ ++S+ NP SP SP SP P +
Sbjct: 636 PSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGP 695
Query: 560 SPQPRGQETESLDPPSVPVNP-ALYGNGL---------------ELQQLSTLDDRTVLVG 603
SP P G S P++P A+ GN + + Q S DR +
Sbjct: 696 SPSPVGSPASVAQSRSGPLSPAAVPGNQMPPRPPSGQSDSIMHPSMNQSSIAQDRGYM-- 753
Query: 604 QRLPLMAEVSETALYCGIRPSNPESSE 630
QR P M + S + P P +
Sbjct: 754 QRNPQMPQYSSPQPGSALSPRQPSGGQ 780
Score = 31.6 bits (70), Expect = 9.0
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 10/102 (9%)
Query: 1533 PAAAQGQATPG--NAGPLAPNGSAAPPAGSAFNPTSN-------SSSTNPAASSSASGSS 1583
P +G +PG +G + G + PA S F+P ++ S +P S ++ S
Sbjct: 650 PMGTEGALSPGVSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQS 709
Query: 1584 VPPVSSSASAPGISQISTTSSSGFSGSVGGQNPSTGGISADR 1625
S A+ PG +Q+ SG S S+ + + I+ DR
Sbjct: 710 RSGPLSPAAVPG-NQMPPRPPSGQSDSIMHPSMNQSSIAQDR 750
>gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]
Length = 2068
Score = 44.3 bits (103), Expect = 0.001
Identities = 39/115 (33%), Positives = 55/115 (47%), Gaps = 14/115 (12%)
Query: 1511 APYLATLQLDSSLLIPPKYQTPPAAAQGQATPGNA-GPLAPNGSAAPPAGSAFNPTSNSS 1569
+P LA LQ + P Y P + P + PN SA PP A+ +S
Sbjct: 178 SPGLAALQSGGGGGLEP-YAGPQQNSHDHGFPNHQYNSYYPNRSAYPPPAPAYALSSPRG 236
Query: 1570 STNPAASSSASGSSVPPVSSSASAPGISQISTTSSSGFS----GSVGGQNPSTGG 1620
T + +++A+GS PP SSSASA ++SSS F+ G++GG PS G
Sbjct: 237 GTPGSGAAAAAGSKPPP-SSSASA-------SSSSSSFAQQRFGAMGGGGPSAAG 283
Score = 34.7 bits (78), Expect = 1.1
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 11/97 (11%)
Query: 986 PMPPAATFIRDGYNNVPSVGSLADPDYLNTPQMNTPVTLNSAAPASNSGAGVLPSPATPR 1045
P+ PAA N +P D + P MN ++ A + G + +P P+
Sbjct: 713 PLSPAAV----PGNQMPPRPPSGQSDSIMHPSMN------QSSIAQDRGY-MQRNPQMPQ 761
Query: 1046 FSVPTPRTPRTPRTPRGGGTASGQGSVKYDSTDQGSP 1082
+S P P + +PR P GG +G GS + +S P
Sbjct: 762 YSSPQPGSALSPRQPSGGQIHTGMGSYQQNSMGSYGP 798
Score = 31.6 bits (70), Expect = 9.0
Identities = 56/267 (20%), Positives = 90/267 (33%), Gaps = 38/267 (14%)
Query: 395 QMSTPTLEEEPASNPATWDFVDPTQRVSCSCSRHKLLKRCAVGPNRPPTVSQPGFSAGPS 454
Q S P ++ PA P+ + S+ + A P + QP S
Sbjct: 521 QPSQPPHQQSPAPYPSQQSTTQQHPQSQPPYSQPQ-----AQSPYQQQQPQQPAPSTLSQ 575
Query: 455 SSSSLPPPASSKHKTAERQEKGDKLQKRPLIPFHHRPSVAEELCME-----------QDT 503
++ P + +TA Q++ Q+ F + S A + Q
Sbjct: 576 QAAYPQPQSQQSQQTAYSQQRFPPPQELSQDSFGSQASSAPSMTSSKGGQEDMNLSLQSR 635
Query: 504 PGQKLGLAGIDSSLEVSSSRKYDKQMAVPSRNTSKQMNLNPMDSPHSP-ISPLPPTL--- 559
P L+G L + + ++ ++S+ NP SP SP SP P +
Sbjct: 636 PSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGP 695
Query: 560 SPQPRGQETESLDPPSVPVNP-ALYGNGL---------------ELQQLSTLDDRTVLVG 603
SP P G S P++P A+ GN + + Q S DR +
Sbjct: 696 SPSPVGSPASVAQSRSGPLSPAAVPGNQMPPRPPSGQSDSIMHPSMNQSSIAQDRGYM-- 753
Query: 604 QRLPLMAEVSETALYCGIRPSNPESSE 630
QR P M + S + P P +
Sbjct: 754 QRNPQMPQYSSPQPGSALSPRQPSGGQ 780
Score = 31.6 bits (70), Expect = 9.0
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 10/102 (9%)
Query: 1533 PAAAQGQATPG--NAGPLAPNGSAAPPAGSAFNPTSN-------SSSTNPAASSSASGSS 1583
P +G +PG +G + G + PA S F+P ++ S +P S ++ S
Sbjct: 650 PMGTEGALSPGVSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQS 709
Query: 1584 VPPVSSSASAPGISQISTTSSSGFSGSVGGQNPSTGGISADR 1625
S A+ PG +Q+ SG S S+ + + I+ DR
Sbjct: 710 RSGPLSPAAVPG-NQMPPRPPSGQSDSIMHPSMNQSSIAQDR 750
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 43.9 bits (102), Expect = 0.002
Identities = 41/172 (23%), Positives = 67/172 (38%), Gaps = 26/172 (15%)
Query: 1508 HHLAPYLATLQLDSSLLIP-PKYQTPPAAAQGQATPGNAGPLAPNGSAAPPAGSAFNPTS 1566
H AP ++ + + L+P PK P Q TP G AP AAP +A P +
Sbjct: 209 HAAAPAVSLVNNGPAALLPLPKPAAPGTVIQ---TPPFVGAAAPPAPAAPSPPAAPAPAA 265
Query: 1567 NSSSTNPAASSSASGSSVP--PVSSSASAPGISQISTTSSSGFSGSVGGQNPSTGGISAD 1624
+++ P + A+ + P P +AP + + + G +G+ P+ GG +
Sbjct: 266 PAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPA-- 323
Query: 1625 RTQGNIGCGGDTDPGQSSSQPSQDGQESVTERERIGIPTEPDSADSHAHPPA 1676
G G PG +++ P+ G+ E A PPA
Sbjct: 324 ------GVSGQPGPGAAAAAPAP------------GVKAESPKRVVQAAPPA 357
Score = 33.5 bits (75), Expect = 2.4
Identities = 30/114 (26%), Positives = 45/114 (39%), Gaps = 15/114 (13%)
Query: 1521 SSLLIPPKYQT-PPAAAQGQATPGNAGPLAPNGSAAPPAGSAFNPTSNSSSTNPAASSSA 1579
++L PP + PP AA P A G+A PA +A P S P A+++A
Sbjct: 278 ATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAA 337
Query: 1580 SGSSV------------PPVSSSASAPGISQISTTSSSGFSGSVGGQNPSTGGI 1621
V PP + + +A G ST +S ++ G PS +
Sbjct: 338 PAPGVKAESPKRVVQAAPPAAQTLAASG--PASTAASMVIGPTMQGALPSPAAV 389
Score = 32.3 bits (72), Expect = 5.3
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Query: 1539 QATPGNAGPLAPNGSAAPPAGSAFNPTSNSSSTNPAA---SSSASGSSVPPVSSSASAPG 1595
QA P A LA +G A+ A PT + +PAA + + + +P ++ A
Sbjct: 352 QAAPPAAQTLAASGPASTAASMVIGPTMQGALPSPAAVPPPAPGTPTGLPKGAAGAVTQS 411
Query: 1596 ISQISTTSSSGFSGSV 1611
+S+ T ++SG ++
Sbjct: 412 LSRTPTATTSGIRATL 427
Score = 32.0 bits (71), Expect = 6.9
Identities = 31/120 (25%), Positives = 42/120 (35%), Gaps = 14/120 (11%)
Query: 1530 QTPPAAAQGQATPGNAGPLAPNGSAAPPAGSAFNPTSNSSSTNPAASSSASGSSVPPVSS 1589
+ PPA G+A PG GP P PP S P + PAA PP S
Sbjct: 88 EPPPA---GRARPGGGGPQRP----GPP--SPRRPLVPAGPAPPAAKLRP-----PPEGS 133
Query: 1590 SASAPGISQISTTSSSGFSGSVGGQNPSTGGISADRTQGNIGCGGDTDPGQSSSQPSQDG 1649
+ S + + ++ G P+ A R G G PG +P+ G
Sbjct: 134 AGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGPGKPAGPG 193
Score = 31.6 bits (70), Expect = 9.0
Identities = 22/70 (31%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Query: 1527 PKYQTPPAAAQGQATPGNAGPLAP-NGSAAPPAGSAFNPTSNSSSTNPAASSSASGSSVP 1585
P PPAA G+AG AP +AA AG P + PAA ++ +G
Sbjct: 116 PAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPG 175
Query: 1586 PVSSSASAPG 1595
P PG
Sbjct: 176 PGPGPGPGPG 185
>gi|192807286 zinc finger and BTB domain containing 4 [Homo sapiens]
Length = 1013
Score = 43.9 bits (102), Expect = 0.002
Identities = 42/135 (31%), Positives = 63/135 (46%), Gaps = 29/135 (21%)
Query: 1542 PGNAGPLAPNGSAAPPAGSAFNPTSNSSSTNPAASSSASG--SSVPPVSSSASA-PGISQ 1598
P G APN + A S+ + +S+SSS++ +ASSS+S SS PP S AS+ P + +
Sbjct: 68 PPATGGAAPNPATTTAASSSSSSSSSSSSSSSSASSSSSSSSSSPPPASPPASSPPRVLE 127
Query: 1599 ISTTSSSGFSGSV-------------GGQNPSTGGISA-------DRTQGNIGCGGD--- 1635
+ ++ FS + GG + I A R QG +G GGD
Sbjct: 128 LPGVPAAAFSDVLNFIYSARLALPGGGGDGAAVAEIGALGRRLGISRLQG-LGEGGDAWV 186
Query: 1636 --TDPGQSSSQPSQD 1648
T ++SQP +D
Sbjct: 187 PPTPAPMATSQPEED 201
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.132 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98,986,579
Number of Sequences: 37866
Number of extensions: 5354759
Number of successful extensions: 34610
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 126
Number of HSP's successfully gapped in prelim test: 733
Number of HSP's that attempted gapping in prelim test: 26109
Number of HSP's gapped (non-prelim): 7802
length of query: 2210
length of database: 18,247,518
effective HSP length: 118
effective length of query: 2092
effective length of database: 13,779,330
effective search space: 28826358360
effective search space used: 28826358360
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 70 (31.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.