MED13 87

Name: MED13	Sequence: fasta or formatted (2174aa)		NCBI GI: 102468717
Description: mediator complex subunit 13		Referenced in: Nuclear Receptors RNA Polymerase and General Transcription Factors
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.9 129 2 C cysteine 2.9 62 2 D aspartate 5.8 127 2 E glutamate 5.5 120 3 F phenylalanine 3.7 80 2 G glycine 5.8 127 2 H histidine 2.3 50 2 I isoleucine 3.7 80 2 K lysine 5.0 108 3 L leucine 9.2 199 3 M methionine 2.3 50 1 N asparagine 4.1 90 2 P proline 8.0 173 3 Q glutamine 5.1 111 4 R arginine 3.8 82 2 S serine 11.0 240 6 T threonine 6.0 130 2 V valine 6.0 130 2 W tryptophan 1.4 30 2 Y tyrosine 2.6 56 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 mediator complex subunit 13 MED13L 0.483 mediator complex subunit 13-like LOC100131251 0.007 PREDICTED: hypothetical protein LOC100131251 0.007 PREDICTED: hypothetical protein MUC3B 0.005 PREDICTED: mucin 3B, cell surface associated, parti... MUC21 0.005 mucin 21 LOC729792 0.005 PREDICTED: hypothetical protein LOC729792 0.005 PREDICTED: hypothetical protein LOC729792 0.005 PREDICTED: hypothetical protein LOC100294501 0.005 PREDICTED: hypothetical protein LOC100294249 0.005 PREDICTED: hypothetical protein XP_002344067 LOC100294238 0.005 PREDICTED: hypothetical protein LOC100294204 0.005 PREDICTED: hypothetical protein LOC100294136 0.005 PREDICTED: hypothetical protein LOC100294091 0.005 PREDICTED: hypothetical protein LOC730401 0.005 PREDICTED: hypothetical protein CDKN2AIP 0.005 CDKN2A interacting protein RGAG1 0.005 retrotransposon gag domain containing 1 TNRC18 0.005 trinucleotide repeat containing 18 LOC100131514 0.005 PREDICTED: similar to hCG1747327, partial NUP98 0.005 nucleoporin 98kD isoform 4 NUP98 0.005 nucleoporin 98kD isoform 3 NUP98 0.005 nucleoporin 98kD isoform 1 NUP98 0.005 nucleoporin 98kD isoform 2 ATF7IP 0.005 activating transcription factor 7 interacting protei... PCLO 0.005 piccolo isoform 2 PCLO 0.005 piccolo isoform 1 UBAP2 0.004 ubiquitin associated protein 2 MUC5AC 0.004 mucin 5AC AP3D1 0.004 adaptor-related protein complex 3, delta 1 subunit ... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.