Guide to the Human Genome
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Name: ZBTB4 Sequence: fasta or formatted (1013aa) NCBI GI: 192807286
Description:

zinc finger and BTB domain containing 4

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt mRNA [1013aa] zinc finger and BTB domain containing 4
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.7        119           3
 C cysteine            1.7         17           1
 D aspartate           2.1         21           1
 E glutamate           7.5         76           6
 F phenylalanine       2.1         21           2
 G glycine            12.1        123           5
 H histidine           2.1         21           1
 I isoleucine          2.1         21           2
 K lysine              3.6         36           2
 L leucine             6.2         63           2
 M methionine          0.9          9           1
 N asparagine          1.3         13           1
 P proline            13.4        136           5
 Q glutamine           2.8         28           1
 R arginine            6.9         70           2
 S serine              9.4         95          16
 T threonine           5.8         59           3
 V valine              4.8         49           2
 W tryptophan          0.8          8           1
 Y tyrosine            2.8         28           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger and BTB domain containing 4 
ZBTB4                 1.000   zinc finger and BTB domain containing 4 
ZBTB38                0.095   zinc finger and BTB domain containing 38 
ZBTB33                0.056   kaiso 
ZNF628                0.039   zinc finger protein 628 
HIC1                  0.031   hypermethylated in cancer 1 isoform 2 
HIC1                  0.031   hypermethylated in cancer 1 isoform 1 
ZNF746                0.029   zinc finger protein 746 
ZNF683                0.028   zinc finger protein 683 
ZNF683                0.028   zinc finger protein 683 
ZNF596                0.028   zinc finger protein 596 
ZNF596                0.028   zinc finger protein 596 
ZNF596                0.028   zinc finger protein 596 
ZNF358                0.027   zinc finger protein 358 
ZNF498                0.026   zinc finger and SCAN domain containing 25 
PRDM1                 0.026   PR domain containing 1, with ZNF domain isoform 1 [...
PRDM1                 0.026   PR domain containing 1, with ZNF domain isoform 2 [H...
ZNF398                0.026   zinc finger 398 isoform b 
ZNF398                0.026   zinc finger 398 isoform a 
LOC647678             0.025   PREDICTED: similar to zinc finger protein 347 [Homo...
LOC647678             0.025   PREDICTED: similar to zinc finger protein 347 [Homo...
LOC100287477          0.025   PREDICTED: hypothetical protein XP_002343697 
ZNF14                 0.025   zinc finger protein 14 
ZNF625                0.025   zinc finger protein 625 
ZNF837                0.025   zinc finger protein 837 isoform 1 
ZNF837                0.025   zinc finger protein 837 isoform 2 
ZNF282                0.025   zinc finger protein 282 
FIZ1                  0.025   FLT3-interacting zinc finger 1 
LOC729747             0.025   similar to zinc finger protein 709 
ZNF267                0.024   zinc finger protein 267 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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