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Search of human proteins with 42821110
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|42821110 hypothetical protein LOC340602 [Homo sapiens]
(503 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|42821110 hypothetical protein LOC340602 [Homo sapiens] 1009 0.0
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 86 8e-17
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 79 7e-15
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 76 6e-14
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 64 4e-10
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 63 7e-10
gi|163965366 nascent polypeptide-associated complex alpha subuni... 60 4e-09
gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens] 60 5e-09
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 60 6e-09
gi|112734870 hypothetical protein LOC57648 [Homo sapiens] 59 1e-08
gi|239752594 PREDICTED: hypothetical protein, partial [Homo sapi... 57 4e-08
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 57 5e-08
gi|82534351 microtubule-associated protein tau isoform 1 [Homo s... 56 7e-08
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho... 54 3e-07
gi|157785645 SPEG complex locus [Homo sapiens] 54 3e-07
gi|178557734 microtubule-associated protein tau isoform 6 [Homo ... 54 4e-07
gi|40353729 Ras and Rab interactor 3 [Homo sapiens] 54 4e-07
gi|42475970 synapse defective 1, Rho GTPase, homolog 1 [Homo sap... 53 7e-07
gi|239748777 PREDICTED: hypothetical protein [Homo sapiens] 52 1e-06
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 52 1e-06
gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo ... 52 1e-06
gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo ... 52 1e-06
gi|239508962 PREDICTED: hypothetical protein [Homo sapiens] 52 1e-06
gi|149773456 hypothetical protein LOC643314 [Homo sapiens] 52 2e-06
gi|23065526 growth arrest-specific 2 like 1 isoform a [Homo sapi... 51 3e-06
gi|19923777 growth arrest-specific 2 like 1 isoform a [Homo sapi... 51 3e-06
gi|18959210 WIRE protein [Homo sapiens] 51 3e-06
gi|21735552 mitogen-activated protein kinase kinase kinase 12 [H... 50 4e-06
gi|239743051 PREDICTED: hypothetical protein XP_002342747 [Homo ... 50 4e-06
gi|55741677 SET domain containing 1A [Homo sapiens] 50 4e-06
>gi|42821110 hypothetical protein LOC340602 [Homo sapiens]
Length = 503
Score = 1009 bits (2610), Expect = 0.0
Identities = 503/503 (100%), Positives = 503/503 (100%)
Query: 1 MATQSDMEKEQKHQQDEGQGGLNNETALASGDACGTGNQDPAASVTTVSSQASPSGGAAL 60
MATQSDMEKEQKHQQDEGQGGLNNETALASGDACGTGNQDPAASVTTVSSQASPSGGAAL
Sbjct: 1 MATQSDMEKEQKHQQDEGQGGLNNETALASGDACGTGNQDPAASVTTVSSQASPSGGAAL 60
Query: 61 SSSTAGSSAAAATSAAIFITDEASGLPIIAAVLTERHSDRQDCRSPHEVFGCVVPEGGSQ 120
SSSTAGSSAAAATSAAIFITDEASGLPIIAAVLTERHSDRQDCRSPHEVFGCVVPEGGSQ
Sbjct: 61 SSSTAGSSAAAATSAAIFITDEASGLPIIAAVLTERHSDRQDCRSPHEVFGCVVPEGGSQ 120
Query: 121 AAVGPQKATGHADEHLAQTKSPGNSRRRKQPCRNQAAPAQKPPGRRLFPEPLPPSSPGFR 180
AAVGPQKATGHADEHLAQTKSPGNSRRRKQPCRNQAAPAQKPPGRRLFPEPLPPSSPGFR
Sbjct: 121 AAVGPQKATGHADEHLAQTKSPGNSRRRKQPCRNQAAPAQKPPGRRLFPEPLPPSSPGFR 180
Query: 181 PSSYPCSGASTSSQATQPGPALLSHASEARPATRSRITLVASALRRRASGPGPVIRGCTA 240
PSSYPCSGASTSSQATQPGPALLSHASEARPATRSRITLVASALRRRASGPGPVIRGCTA
Sbjct: 181 PSSYPCSGASTSSQATQPGPALLSHASEARPATRSRITLVASALRRRASGPGPVIRGCTA 240
Query: 241 QPGPAFPHRATHLDPARLSPESAPGPARRGRASVPGPARRGCDSAPGPARRGRDSAPVSA 300
QPGPAFPHRATHLDPARLSPESAPGPARRGRASVPGPARRGCDSAPGPARRGRDSAPVSA
Sbjct: 241 QPGPAFPHRATHLDPARLSPESAPGPARRGRASVPGPARRGCDSAPGPARRGRDSAPVSA 300
Query: 301 PRGRDSAPGSARRGRDSAPGPALRVRTARSDAGHRSTSTTPGTGLRSRSTQQRSALLSRR 360
PRGRDSAPGSARRGRDSAPGPALRVRTARSDAGHRSTSTTPGTGLRSRSTQQRSALLSRR
Sbjct: 301 PRGRDSAPGSARRGRDSAPGPALRVRTARSDAGHRSTSTTPGTGLRSRSTQQRSALLSRR 360
Query: 361 SLSGSADENPSCGTGSERLAFQSRSGSPDPEVPSRASPPVWHAVRMRASSPSPPGRFFLP 420
SLSGSADENPSCGTGSERLAFQSRSGSPDPEVPSRASPPVWHAVRMRASSPSPPGRFFLP
Sbjct: 361 SLSGSADENPSCGTGSERLAFQSRSGSPDPEVPSRASPPVWHAVRMRASSPSPPGRFFLP 420
Query: 421 IPQQWDESSSSSYASNSSSPSRSPGLSPSSPSPEFLGLRSISTPSPESLRYALMPEFYAL 480
IPQQWDESSSSSYASNSSSPSRSPGLSPSSPSPEFLGLRSISTPSPESLRYALMPEFYAL
Sbjct: 421 IPQQWDESSSSSYASNSSSPSRSPGLSPSSPSPEFLGLRSISTPSPESLRYALMPEFYAL 480
Query: 481 SPVPPEEQAEIESTAHPATPPEP 503
SPVPPEEQAEIESTAHPATPPEP
Sbjct: 481 SPVPPEEQAEIESTAHPATPPEP 503
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 85.9 bits (211), Expect = 8e-17
Identities = 119/430 (27%), Positives = 166/430 (38%), Gaps = 66/430 (15%)
Query: 118 GSQAAVGPQKATGHADEHLAQTKSP---GNSRRRKQP----CRNQAAPAQKPPGRRLFPE 170
G + PQ + + +++SP G SR ++P RN + RR
Sbjct: 504 GHSRSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSH 563
Query: 171 PLPPSSPGFRPSSYPC----SGASTSSQATQPGPALLSHASEARPATRSRITLVASALRR 226
P++ G S P S + T ++ S +R R + + RR
Sbjct: 564 SRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARR 623
Query: 227 RASGPGPVIRGCTAQPGPAFPHRATHLDPARLSPESAPGPARRGRASVPGPARR-GCDSA 285
R+ PV R ++ R+ PAR + PARRGR+ PARR G +
Sbjct: 624 RSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRSGRSRS 683
Query: 286 PGPARRGRDSAPVSAPRGRDSAPGSARRGRDSAPGPALRVRTARSD--------AGHRST 337
PARRGR S + RGR + RRGR + P R R+ S + RS
Sbjct: 684 RTPARRGR-SRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQRRSR 742
Query: 338 STTPGTGLRSRSTQQRSALLS------------RRSLSGSADENPSCGTGSERLAFQSRS 385
S + +SR + +RS LS RRSLSGS +P S+ +SRS
Sbjct: 743 SNSSPEMKKSRISSRRSRSLSSPRSKAKSRLSLRRSLSGS---SPCPKQKSQTPPRRSRS 799
Query: 386 GSPDPEVPSRASPPVWHAVRMRASSPSPPGRFFLPIPQQWDESSSSSYAS-NSSSPSRSP 444
GS P+ SR P R SS SPP + P + SSSS + S +P R
Sbjct: 800 GSSQPKAKSRTPP------RRSRSSSSPPPKQKSKTPSRQSHSSSSPHPKVKSGTPPRQG 853
Query: 445 GLS-----------------PSSPSPEFLGLRSISTPSPESLRYALMPEFYALSPVPPEE 487
++ SSP PE L+S TPS S + P S PP +
Sbjct: 854 SITSPQANEQSVTPQRRSCFESSPDPE---LKS-RTPSRHSCSGSSPPR--VKSSTPPRQ 907
Query: 488 QAEIESTAHP 497
S+ P
Sbjct: 908 SPSRSSSPQP 917
Score = 65.9 bits (159), Expect = 8e-11
Identities = 113/450 (25%), Positives = 160/450 (35%), Gaps = 127/450 (28%)
Query: 130 GHADEHLAQT---KSPGNSRRRKQPCRNQAAPAQKPPGRRLFPEPLPPSSPGFR--PSSY 184
G + + LA T + P N P R+++ P PE LP SS PS
Sbjct: 375 GGSPQPLATTPLSQEPVNPPSEASPTRDRSPPKS--------PEKLPQSSSSESSPPSPQ 426
Query: 185 PCS---GASTSSQATQPGPALLSHAS-EARPATRSRITLVASALRRRASGPGPVIRGCTA 240
P AS+S ++ +P PA SH + P +++R A R ++
Sbjct: 427 PTKVSRHASSSPESPKPAPAPGSHREISSSPTSKNRSH--GRAKRDKSH----------- 473
Query: 241 QPGPAFPHRATHLDPARLSPESAPGPARRGRASVPGPARRGCDSAPGP------------ 288
+H R+ +P A+RGR+ P +RG + P
Sbjct: 474 ----------SHTPSRRMGRSRSPATAKRGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWG 523
Query: 289 ---------------------------------ARRGRDSAPVSAPRGRDSAPGSARRGR 315
ARRGR + A RGR + ARRGR
Sbjct: 524 RSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTPARRGR 583
Query: 316 DSAPGPALRVRTARSDAGHRSTSTTPGTGLRSRS---TQQRSALLS---RRSLSGSADEN 369
+ PA R +R+ RS S TP RSRS ++RS S RRS S S
Sbjct: 584 SRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRS---- 639
Query: 370 PSCGTGSERLAFQSRSGSPDPEVP-----SRASPPVWHAVRMRASSPS------------ 412
P+ +G R +R G P SR+ P + R R+ +P+
Sbjct: 640 PARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRSGRSRSRTPARRGRSRSRTPRR 699
Query: 413 ---------PPGRFFLPIPQQWDESSSSSYASNSSSPSRSPGLSPSSPSPEFLGL----- 458
GR PQ+ S SSS N S S+ S SSP + +
Sbjct: 700 GRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQRRSRSNSSPEMKKSRISSRRS 759
Query: 459 RSISTP-SPESLRYALMPEFYALSPVPPEE 487
RS+S+P S R +L SP P ++
Sbjct: 760 RSLSSPRSKAKSRLSLRRSLSGSSPCPKQK 789
Score = 62.8 bits (151), Expect = 7e-10
Identities = 124/518 (23%), Positives = 178/518 (34%), Gaps = 76/518 (14%)
Query: 26 TALASGDACGTGNQDPAASVTTVSSQASPSGGAALSSSTAGSSAAAATSAAIFITDEASG 85
TA++ G A + A +S +P +L ++ A + A+ +A+ + AS
Sbjct: 2186 TAISLGTARPPPSMSAAGLAARMSQVPAPVPLMSLRTAPAANLASRIPAASAAAMNLASA 2245
Query: 86 -LPIIAAVLTERHSDRQDCRSPHEVFGCVVPEGGSQAAVGPQKATGHADEHLAQTKSPGN 144
P I + + D R+P + P+ A + +LA ++P
Sbjct: 2246 RTPAIPTAV-----NLADSRTP--------AAAAAMNLASPRTAVAPSAVNLADPRTPTA 2292
Query: 145 SRRRKQPCRNQAAPAQKPPGRRLFPEPLPPSSPGFRPSSYPCSGASTSSQATQPGPALLS 204
R AA A L PP++ + PSS A S+ P A
Sbjct: 2293 PAVNLAGARTPAALA----ALSLTGSGTPPTAANY-PSSSRTPQAPASANLVGPRSA--- 2344
Query: 205 HASEARPATRSRITLVASALRRRASGPGPVIRGCTAQPGPAFPHRATHLDPARLSPESAP 264
HA+ SR + ++ P + G P P A R SP
Sbjct: 2345 HATAPVNIAGSRTAAALAPASLTSARMAPALSGANLT-SPRVPLSAYERVSGRTSPPLLD 2403
Query: 265 GPARRGRASVPGPARRGCDSAPGPARR-----GRDSAPVSAPRGRDSAPGSAR------- 312
R S P +R + AP P+ R + P + + R P +
Sbjct: 2404 RARSRTPPSAPSQSRMTSERAPSPSSRMGQAPSQSLLPPAQDQPRSPVPSAFSDQSRCLI 2463
Query: 313 ------RGRDSAPGPALRVRTARSDAG-HRSTSTTPGTGL---------RSRSTQQRSAL 356
G S A V T S AG H + P G+ S QQ SAL
Sbjct: 2464 AQTTPVAGSQSLSSGA--VATTTSSAGDHNGMLSVPAPGVPHSDVGEPPASTGAQQPSAL 2521
Query: 357 LS------RRSLSGSADENPSCGTGSERLAFQSRSGSPDPEVPSRASPPVWHAVRMRASS 410
+ RRS S S+ + S + S + S SGS + + P R S
Sbjct: 2522 AALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALKRVPS 2581
Query: 411 PSPP-------GRFFLPIPQQWDESSSSSYASNSSSPSRSPGLSPSSPSPEFLGLRSIST 463
P+P GR P P + SSSS +S+SSS S S S SS S S S+
Sbjct: 2582 PTPAPKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2641
Query: 464 PSPESLRYALMPEFYALSPVPPEEQAEIESTAHPATPP 501
S S + SP P QA + A P PP
Sbjct: 2642 SSSSSS---------SPSPAKPGPQA-LPKPASPKKPP 2669
Score = 62.0 bits (149), Expect = 1e-09
Identities = 110/456 (24%), Positives = 170/456 (37%), Gaps = 63/456 (13%)
Query: 40 DPAASVTTVSSQASPSGGAALSSSTAGSSAAAATSAAIFITDEASGLPIIAAVLTERHSD 99
DP+ + S+++S + LS A A ++++ P++ AV +
Sbjct: 1366 DPSLDMKEQSTRSSGHSSSELSPD--------AVEKAGMSSNQSISSPVLDAVPRTPSRE 1417
Query: 100 RQDCRSPHEVFGCV--VPEGGSQAAVGP--QKATGHADEHLAQTKSPGNSRRRKQPCRNQ 155
R S E+ + P S++ P + +G H SPG + P R +
Sbjct: 1418 RSSSASSPEMKDGLPRTPSRRSRSGSSPGLRDGSGTPSRHSLSGSSPGMKDIPRTPSRGR 1477
Query: 156 AAPAQKPPGRRLFPEPLPPS-SPGFRPSSYPC-------SGASTSSQATQPGPALLSHAS 207
+ P + L P P S SP + C SG+ +S L S
Sbjct: 1478 SECDSSPEPKALPQTPRPRSRSPSSPELNNKCLTPQRERSGSESSVDQKTVARTPLGQRS 1537
Query: 208 EARPATRSRITLVASALRRRASGPGPVIRGCTAQPGPAFPHRATHLD---PARLSPE--- 261
+ + + AS R S P + T P + + +RLSP
Sbjct: 1538 RSGSSQELDVKPSASPQERSESDSSPDSKAKTRTPLRQRSRSGSSPEVDSKSRLSPRRSR 1597
Query: 262 SAPGPARRGRASVPGPARRGCDS-----APGPARRGRDSAPVSAPRGRDSAPGSARRGRD 316
S P + + A+ G DS AP P R S S+ +GR +P +
Sbjct: 1598 SGSSPEVKDKPRAAPRAQSGSDSSPEPKAPAPRALPRRSRSGSSSKGRGPSP-EGSSSTE 1656
Query: 317 SAPGPALRVRTARSDAGHRSTSTTPGTGLRSRSTQQRSALLSRRSLSGSADENPSCGTGS 376
S+P + RTAR R + ++P +SR+ +R + S L+ A
Sbjct: 1657 SSPEHPPKSRTAR-----RGSRSSPEPKTKSRTPPRRRSSRSSPELTRKA---------- 1701
Query: 377 ERLAFQSRSGSPDPEVPSRASPPVWHAVRMRASSPSPPGRFFLPIPQQWDESSSSSYASN 436
RL+ +SRS S PE SR P H SSP P ++S SS +
Sbjct: 1702 -RLSRRSRSASSSPETRSRTPPR--HRRSPSVSSPEPA-----------EKSRSSRRRRS 1747
Query: 437 SSSP-SRSPGLSPSSPSPEFLGL-RSISTPSPESLR 470
+SSP +++ SPSP+ GL RS S E R
Sbjct: 1748 ASSPRTKTTSRRGRSPSPKPRGLQRSRSRSRREKTR 1783
Score = 61.2 bits (147), Expect = 2e-09
Identities = 93/389 (23%), Positives = 149/389 (38%), Gaps = 52/389 (13%)
Query: 137 AQTKSPGNSRRRKQPCRNQAAPAQKPP---GRRLFPEPLPPSSPGFRPS-SYPCSGASTS 192
+ ++ SR ++ R+ ++P K RR P S R S SG+S
Sbjct: 726 SSSERKNKSRTSQRRSRSNSSPEMKKSRISSRRSRSLSSPRSKAKSRLSLRRSLSGSSPC 785
Query: 193 SQATQPGPALLSHASEARPATRSRITLVASALRRRASGPGPVIRGCTAQPGPAFPHRATH 252
+ P S + ++P +SR S R +S P P + T P R +H
Sbjct: 786 PKQKSQTPPRRSRSGSSQPKAKSRTPPRRS---RSSSSPPPKQKSKT-------PSRQSH 835
Query: 253 LDPARLSPESAPGPARRGRASVPG-------PARRGC-DSAPGPARRGR-----DSAPVS 299
+ + P R+G + P P RR C +S+P P + R + S
Sbjct: 836 SSSSPHPKVKSGTPPRQGSITSPQANEQSVTPQRRSCFESSPDPELKSRTPSRHSCSGSS 895
Query: 300 APRGRDSAPGSARRGRDSAPGPALRVRTARSDAGHRSTSTTPGTGLRSRSTQQRSALLSR 359
PR + S P R S+P P ++ + H +S+ + + SR+T +RS
Sbjct: 896 PPRVKSSTPPRQSPSRSSSPQPKVKAIISPRQRSHSGSSSPSPSRVTSRTTPRRS----- 950
Query: 360 RSLSGSADENPSCGTGSERLAFQSRSG--SPDPEVPSRASPPVWHA------VRMRASSP 411
RS+S P S L S SG SPD +V P H+ +++A +P
Sbjct: 951 RSVS------PCSNVESRLLPRYSHSGSSSPDTKVKPETPPRQSHSGSISPYPKVKAQTP 1004
Query: 412 SPPGRFFLPIPQQWDESSSSSYASNSSSPSRSPGLSPSSPSPE-FLGLRSI-----STPS 465
P P ++S S S S S G+ S+P E + G+ S+ S S
Sbjct: 1005 PGPSLSGSKSPCPQEKSKDSLVQSCPGSLSLCAGVKSSTPPGESYFGVSSLQLKGQSQTS 1064
Query: 466 PESLRYALMPEFYALSPVPPEEQAEIEST 494
P+ PE P Q++ +++
Sbjct: 1065 PDHRSDTSSPEVRQSHSESPSLQSKSQTS 1093
Score = 60.5 bits (145), Expect = 4e-09
Identities = 120/494 (24%), Positives = 176/494 (35%), Gaps = 70/494 (14%)
Query: 26 TALASGDACGTGNQDPAASVTTVSSQASPSGGAALSSSTAGSSAAAATSAAIFITDEASG 85
TA+A + P A ++ +P+ AALS + +G+ AA + T +A
Sbjct: 2275 TAVAPSAVNLADPRTPTAPAVNLAGARTPAALAALSLTGSGTPPTAANYPSSSRTPQA-- 2332
Query: 86 LPIIAAVLTERHSDRQDCRSPHEVFGCVVPEGGSQAAVGPQKATGH------ADEHLAQT 139
P A ++ R S H + + AA+ P T + +L
Sbjct: 2333 -PASANLVGPR--------SAHATAPVNIAGSRTAAALAPASLTSARMAPALSGANLTSP 2383
Query: 140 KSPGN-----SRRRKQPCRNQA---APAQKPPGRRLFPE--PLPPSSPGFRPSSYPCSGA 189
+ P + S R P ++A P P R+ E P P S G PS A
Sbjct: 2384 RVPLSAYERVSGRTSPPLLDRARSRTPPSAPSQSRMTSERAPSPSSRMGQAPSQSLLPPA 2443
Query: 190 STSSQATQPGPALLSHASEARPATRSRI----TLVASALRRRASGPGPVIRGCTAQPGPA 245
Q P P+ S S A + + +L + A+ S G G + P P
Sbjct: 2444 Q--DQPRSPVPSAFSDQSRCLIAQTTPVAGSQSLSSGAVATTTSSAGDH-NGMLSVPAPG 2500
Query: 246 FPHRATHLDPARLSPE-----SAPGPARRGRASVPGPARRGCDSAPGPARRGRDSAPVSA 300
PH PA + +A PA+ R+S + S+ + S+ S+
Sbjct: 2501 VPHSDVGEPPASTGAQQPSALAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSS 2560
Query: 301 PRGRDS------------------APGSA-RRGRDSAPGPALRVRTARSDAGHRSTSTTP 341
S AP A R GR P PA R R + S + S+S++
Sbjct: 2561 SDSEGSSLPVQPEVALKRVPSPTPAPKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSS 2620
Query: 342 GTGLRSRSTQQRSALLSRRSLSGSADENPS-CGTGSERLAFQSRSGSPDPEVPSRASP-- 398
+ S S+ S+ S S S S+ +PS G + L + P P SP
Sbjct: 2621 SSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPASPKKPPPGERRSRSPRK 2680
Query: 399 PVWHAVRMRASSPSP-PGRFFLPIPQQWDESSSSSYASNSSSPSRSPGLSPSSPSPEFLG 457
P+ R+ S SP R P P D+ SSSS S R SPS
Sbjct: 2681 PIDSLRDSRSLSYSPVERRRPSPQPSPRDQQSSSS-ERGSRRGQRGDSRSPSHK------ 2733
Query: 458 LRSISTPSPESLRY 471
R TPSP +R+
Sbjct: 2734 -RRRETPSPRPMRH 2746
Score = 58.9 bits (141), Expect = 1e-08
Identities = 80/298 (26%), Positives = 117/298 (39%), Gaps = 37/298 (12%)
Query: 131 HADEHLAQTKSPGNSRRRKQPCRNQAAPAQKPPGR-RLFPEPLPPSSPGFRPSSYPCSGA 189
H+ Q S +SRRR+ R++ P + R R P P S P+++ S +
Sbjct: 1821 HSRSPARQESSRTSSRRRRG--RSRTPPTSRKRSRSRTSPAPWKRSRSRASPATHRRSRS 1878
Query: 190 STSSQATQPGPALLSHASEARPATRSRITLVAS-------ALRRRASGPGPVIRGCTAQP 242
T + + + S S R +R+ +T S + RR S PV R +
Sbjct: 1879 RTPLISRRRSRSRTSPVSRRRSRSRTSVTRRRSRSRASPVSRRRSRSRTPPVTRRRSRSR 1938
Query: 243 GPAFPHRATHLDPA----RLSPESAPGPARRGRASVPGPARRGCDSAPGPARRGRD---S 295
P R+ P R + P RR R+ RR S P R R +
Sbjct: 1939 TPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRRSRSRTSPVTRRRSRSRT 1998
Query: 296 APVSAPRGRD-SAPGSARRGRDSAPGPALRVRT-------------ARSDAG--HRSTST 339
+PV+ R R ++P + RR R P PA+R R+ +RS RS S
Sbjct: 1999 SPVTRRRSRSRTSPVTRRRSRSRTP-PAIRRRSRSRTPLLPRKRSRSRSPLAIRRRSRSR 2057
Query: 340 TPGTGLRSRSTQQRSALLSRRSLSGSADENPSCGTGSERLAFQSRSGSPDPEVPSRAS 397
TP T RS + + RRS SGS+ + T A ++ SGS P V +S
Sbjct: 2058 TPRTARGKRSLTRSPPAIRRRSASGSSSDRSRSATPP---ATRNHSGSRTPPVALNSS 2112
Score = 53.9 bits (128), Expect = 3e-07
Identities = 79/310 (25%), Positives = 114/310 (36%), Gaps = 16/310 (5%)
Query: 115 PEGGSQAAVGPQKATGHADEHLAQTKSPGNSRRRKQPCR---NQAAPAQKPPGRRLFPEP 171
PEG S P+ SP + + P R ++++P R
Sbjct: 1649 PEGSSSTESSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRSR 1708
Query: 172 LPPSSPGFRPSSYPCSGASTSSQATQPGPALLSHASEARPATRSRITLVASALRRRASGP 231
SSP R + P S S + P PA S +S R + S T S RR P
Sbjct: 1709 SASSSPETRSRTPPRHRRSPS--VSSPEPAEKSRSSRRRRSASSPRTKTTS---RRGRSP 1763
Query: 232 GPVIRGCTAQPGPAFPH--RATHLDPARLSPESAPGPARRGRASVPGPARRGCDS---AP 286
P RG + R T S +S +R R+ RR S +
Sbjct: 1764 SPKPRGLQRSRSRSRREKTRTTRRRDRSGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSR 1823
Query: 287 GPARRGRDSAPVSAPRGRDSAPGSARRGRDS--APGPALRVRTARSDAGHRSTSTTPGTG 344
PAR+ RGR P ++R+ S +P P R R+ S A HR + +
Sbjct: 1824 SPARQESSRTSSRRRRGRSRTPPTSRKRSRSRTSPAPWKRSRSRASPATHRRSRSRTPLI 1883
Query: 345 LRSRSTQQRSALLSRRSLSGSADENPSCGTGSERLAFQSRSGSPDPEVPSRASPPVWHAV 404
R RS + S + RRS S ++ + + ++ + RS S P V R S
Sbjct: 1884 SRRRSRSRTSPVSRRRSRSRTSVTRRRSRSRASPVS-RRRSRSRTPPVTRRRSRSRTPTT 1942
Query: 405 RMRASSPSPP 414
R R+ S +PP
Sbjct: 1943 RRRSRSRTPP 1952
Score = 51.2 bits (121), Expect = 2e-06
Identities = 95/396 (23%), Positives = 135/396 (34%), Gaps = 70/396 (17%)
Query: 123 VGPQKATGHADEHLAQTKSPGNSRRRKQPCRNQAAPAQKPPGRRLFPEPLPPSSPGFRPS 182
+G + TG + E P ++ P + + + G SS P
Sbjct: 1339 LGTEMNTGFSSEVKEDLNGPFLNQLETDPSLDMKEQSTRSSGH---------SSSELSPD 1389
Query: 183 SYPCSGASTSSQATQP-------GPALLSHASEARPATRSRITLVASALRRRASGPGPVI 235
+ +G S++ + P P+ +S + P + + S R S PG
Sbjct: 1390 AVEKAGMSSNQSISSPVLDAVPRTPSRERSSSASSPEMKDGLPRTPSRRSRSGSSPG--- 1446
Query: 236 RGCTAQPGPAFPHRATHLDPARLSPESAPGPARRGRASVPGPARRGCDSAPGPARRGRDS 295
+ G P R + S P + P R CDS+P P
Sbjct: 1447 ----LRDGSGTPSRHSL---------SGSSPGMKDIPRTPSRGRSECDSSPEP------K 1487
Query: 296 APVSAPRGRDSAPGSA---------RRGRDSAPGPALRVRTARSDAGHRSTSTT------ 340
A PR R +P S +R R + + AR+ G RS S +
Sbjct: 1488 ALPQTPRPRSRSPSSPELNNKCLTPQRERSGSESSVDQKTVARTPLGQRSRSGSSQELDV 1547
Query: 341 -PGTGLRSRSTQQRS--------ALLSRRSLSGSADENPSCGTGSERLAFQSRSGS-PDP 390
P + RS S L +RS SGS+ E S S R +SRSGS P+
Sbjct: 1548 KPSASPQERSESDSSPDSKAKTRTPLRQRSRSGSSPEVDSKSRLSPR---RSRSGSSPEV 1604
Query: 391 EVPSRASPPVWHAVRMRASSPSPPGRFFLPIPQQWDESSSSSYASNSSSPSRSPGLSPSS 450
+ RA+P A SSP P +P++ SSS S S S SP
Sbjct: 1605 KDKPRAAP---RAQSGSDSSPEPKAPAPRALPRRSRSGSSSKGRGPSPEGSSSTESSPEH 1661
Query: 451 PSPEFLGLRSISTPSPESLRYALMPEFYALSPVPPE 486
P P+ R S SPE + P S PE
Sbjct: 1662 P-PKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPE 1696
Score = 48.1 bits (113), Expect = 2e-05
Identities = 90/372 (24%), Positives = 124/372 (33%), Gaps = 100/372 (26%)
Query: 162 PPGRRLFPEPLPPSSPGFRPSSYPCSGAS--------------TSSQATQP------GPA 201
P R F P PS + CSG+S + S + QP P
Sbjct: 867 PQRRSCFESSPDPELKSRTPSRHSCSGSSPPRVKSSTPPRQSPSRSSSPQPKVKAIISPR 926
Query: 202 LLSHASEARPATRSRITLVASALRRRASGPGPVIRGCTAQPGPAFPHRATHLDPARLSPE 261
SH+ + P+ SR+T + R R+ P + P + H + ++ PE
Sbjct: 927 QRSHSGSSSPSP-SRVTSRTTPRRSRSVSPCSNVESRLL---PRYSHSGSSSPDTKVKPE 982
Query: 262 SAPGPARRGRASV---------PGPARRGCDSAPGPARRGRDSAPVSAPRG--------R 304
+ P + G S PGP+ G S P P + +DS S P
Sbjct: 983 TPPRQSHSGSISPYPKVKAQTPPGPSLSGSKS-PCPQEKSKDSLVQSCPGSLSLCAGVKS 1041
Query: 305 DSAPGSA------------------RRGRDSAP--------GPALRVRTARSDAGHRSTS 338
+ PG + R S+P P+L+ ++ S G RS S
Sbjct: 1042 STPPGESYFGVSSLQLKGQSQTSPDHRSDTSSPEVRQSHSESPSLQSKSQTSPKGGRSRS 1101
Query: 339 TTPGTGLRSRS--TQQRSALLSRRSLSGSADENPSCGTGSERLAFQSRSGSPDPEVPSR- 395
++P T L SRS Q R SA G E+ FQS S S P V S
Sbjct: 1102 SSPVTELASRSPIRQDRGEF--------SASPMLKSGMSPEQSRFQSDSSS-YPTVDSNS 1152
Query: 396 ----------------ASPPVWHAVRMRASSPSPPGRFFLPIPQQWDESSSSSYASNSSS 439
A PP A +SP F P P Q SS + +
Sbjct: 1153 LLGQSRLETAESKEKMALPPQEDA----TASPPRQKDKFSPFPVQDRPESSLVFKDTLRT 1208
Query: 440 PSRSPGLSPSSP 451
P R + SSP
Sbjct: 1209 PPRERSGAGSSP 1220
Score = 46.2 bits (108), Expect = 7e-05
Identities = 49/210 (23%), Positives = 72/210 (34%), Gaps = 29/210 (13%)
Query: 259 SPESAPGP-ARRGRASVPGPARRGCDSAPGPARRGRDSAPVSAPRGRDSAPGSARRGRDS 317
S + P P +RR S + D++ +R +A GR +P S RRG
Sbjct: 248 SRSTTPAPKSRRAHRSTSADSASSSDTSRSRSRSAAAKTHTTALAGRSPSPASGRRGEGD 307
Query: 318 APGPALRVRTARSDAGHRSTSTTPGTGLRSRSTQQRSALLSRRSLSGSADENPSCGTGSE 377
AP + + + + + P + + ++ +R S S
Sbjct: 308 APFSEPGTTSTQRPSSPETATKQPSSPYEDKDKDKKEKSATRPSPSPERSSTGPEPPAPT 367
Query: 378 RLAFQSRSGSPDP-----------EVPSRASPPVWHAVRMRASSPSPPGRFFLPIPQQWD 426
L + GSP P PS ASP SPP P++
Sbjct: 368 PLLAERHGGSPQPLATTPLSQEPVNPPSEASP---------TRDRSPP-----KSPEKLP 413
Query: 427 ESSSSSYASNSSSP---SRSPGLSPSSPSP 453
+SSSS + S P SR SP SP P
Sbjct: 414 QSSSSESSPPSPQPTKVSRHASSSPESPKP 443
Score = 45.4 bits (106), Expect = 1e-04
Identities = 96/435 (22%), Positives = 145/435 (33%), Gaps = 85/435 (19%)
Query: 100 RQDCRSPHEVFGCVVPEGGSQAAVGPQKATGHADEHLAQTKSPGNSRRRKQPCRNQAAPA 159
+Q P + + V S++ QK + +++S R RK+ + + +
Sbjct: 161 KQPAPEPPKPYSLVRESSSSRSPTPKQKKKKKKKDRGRRSESSSPRRERKKSSKKKKHRS 220
Query: 160 QKPPGRRLFPEPLPPSSPGFRP-------SSYPCSGASTSSQATQPGPALLSHASEAR-- 210
+ +R P P S + S+ P + + ++T A S S +R
Sbjct: 221 ESESKKRKHRSPTPKSKRKSKDKKRKRSRSTTPAPKSRRAHRSTSADSASSSDTSRSRSR 280
Query: 211 -PATRSRITLVAS-----ALRRRASGPGPVIR-GCTAQPGPAFPHRAT------------ 251
A ++ T +A A RR G P G T+ P+ P AT
Sbjct: 281 SAAAKTHTTALAGRSPSPASGRRGEGDAPFSEPGTTSTQRPSSPETATKQPSSPYEDKDK 340
Query: 252 ---HLDPARLSP---ESAPGP----------ARRGRASVP---GPARRGCDSAPGPARRG 292
R SP S+ GP R G + P P + + P A
Sbjct: 341 DKKEKSATRPSPSPERSSTGPEPPAPTPLLAERHGGSPQPLATTPLSQEPVNPPSEASPT 400
Query: 293 RDSAPVSAPR------GRDSAPGS------ARRGRDSAPGPALRVRTARSDAGHRSTSTT 340
RD +P +P +S+P S +R S P + A + HR S++
Sbjct: 401 RDRSPPKSPEKLPQSSSSESSPPSPQPTKVSRHASSSPESP----KPAPAPGSHREISSS 456
Query: 341 PGTGLRSRSTQQRSALLSRRSLSGSADENPSCGTGSERLAF-----QSRSGSPDPEVPSR 395
P + RS +R S PS G R +SRS +P SR
Sbjct: 457 PTSKNRSHGRAKRDK---------SHSHTPSRRMGRSRSPATAKRGRSRSRTPTKRGHSR 507
Query: 396 ASPPVWHAVRM-----RASSPSPPGRFFLPIPQQWDESSSSSYASNSSSPSRSPGLSPSS 450
+ P W R R+ SP GR P W S ++ S S R S
Sbjct: 508 SRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRG---RSHS 564
Query: 451 PSPEFLGLRSISTPS 465
SP G TP+
Sbjct: 565 RSPATRGRSRSRTPA 579
Score = 40.4 bits (93), Expect = 0.004
Identities = 66/266 (24%), Positives = 95/266 (35%), Gaps = 29/266 (10%)
Query: 249 RATHLDPARLSPESAPGPARRGRASVPGPARRGCDSAPGPARRGRDSAPVSAPRGRDSAP 308
R++ + LSP++ S+ P D+ P R R S+ S+P +D P
Sbjct: 1377 RSSGHSSSELSPDAVEKAGMSSNQSISSPV---LDAVPRTPSRERSSS-ASSPEMKDGLP 1432
Query: 309 GSARRGRDSAPGPALRVRTAR--------SDAGHRSTSTTPGTGLRSRSTQQRSALLSR- 359
+ R S P LR + S G + TP G + L +
Sbjct: 1433 RTPSRRSRSGSSPGLRDGSGTPSRHSLSGSSPGMKDIPRTPSRGRSECDSSPEPKALPQT 1492
Query: 360 ---RSLSGSADE-NPSCGTGSERLAFQSRSGSPDPEVPSRASPPVWHAVRMRASSPSPPG 415
RS S S+ E N C T + RSGS + V + R R+ S
Sbjct: 1493 PRPRSRSPSSPELNNKCLTPQ-----RERSGS-ESSVDQKTVARTPLGQRSRSGSSQELD 1546
Query: 416 RFFLPIPQQWDESSSSSYA-SNSSSPSRSPGLSPSSPSPEFLGLRSISTPSPESLRYALM 474
PQ+ ES SS + + + +P R S SSP + S S SP R
Sbjct: 1547 VKPSASPQERSESDSSPDSKAKTRTPLRQRSRSGSSPEVD-----SKSRLSPRRSRSGSS 1601
Query: 475 PEFYALSPVPPEEQAEIESTAHPATP 500
PE P Q+ +S+ P P
Sbjct: 1602 PEVKDKPRAAPRAQSGSDSSPEPKAP 1627
Score = 40.0 bits (92), Expect = 0.005
Identities = 72/316 (22%), Positives = 110/316 (34%), Gaps = 84/316 (26%)
Query: 21 GLNNETALASGDACGTGNQDPAASVTTVSSQASPSGGAALSSSTAGSSAAAATSAAIFIT 80
G +ALA+ ++S ++ SS +S S + SSS++GSS++
Sbjct: 2514 GAQQPSALAALQPAKERRSSSSSSSSSSSSSSSSSSSS--SSSSSGSSSS---------D 2562
Query: 81 DEASGLPIIAAVLTERHSDRQDCRSPHEVFGCVVPEGGSQAAVGPQKATGHADEHLAQTK 140
E S LP+ V +R VP + T
Sbjct: 2563 SEGSSLPVQPEVALKR-----------------VP---------------------SPTP 2584
Query: 141 SPGNSRRRKQPCRNQAAPAQKPPGRRLFPEPLPPSSPGFRPSSYPCSGASTSSQATQPGP 200
+P + R +P PEP P SS S +S+SS
Sbjct: 2585 APKEAVREGRP-----------------PEPTPAKRKRRSSSSSSSSSSSSSSS------ 2621
Query: 201 ALLSHASEARPATRSRITLVASALRRRASGPGPVIRGCTAQPGPAFPHRATHLDPARLSP 260
S +S + ++ S + +S+ +S P P G A P PA P + + SP
Sbjct: 2622 ---SSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPASPKKPPPGERRSRSP 2678
Query: 261 ESAPGPARRGRASVPGPARRGCDSAPGPARRGRDSAPVSAPRGR------DSAPGSARRG 314
R R+ P R P P RD S+ RG DS S +R
Sbjct: 2679 RKPIDSLRDSRSLSYSPVER---RRPSPQPSPRDQQSSSSERGSRRGQRGDSRSPSHKRR 2735
Query: 315 RDSAPGPALRVRTARS 330
R++ +R R++RS
Sbjct: 2736 RETPSPRPMRHRSSRS 2751
Score = 37.4 bits (85), Expect = 0.032
Identities = 56/225 (24%), Positives = 81/225 (36%), Gaps = 34/225 (15%)
Query: 288 PARRGRDSAPVSAPRGRDSAPGSARRGRDSA--PGPALRVRTARSDAGHRSTSTTPGTGL 345
P RR R++ P P S R S+ P P + + + D G RS S++P
Sbjct: 153 PQRRAREA---KQPAPEPPKPYSLVRESSSSRSPTPKQKKKKKKKDRGRRSESSSP---- 205
Query: 346 RSRSTQQRSALLSRRSLSGSADENPSCGTGSERLAFQSRSGSPDPEVPSRASPPVWHAVR 405
R ++ S RS S S + + SP P+ S+ R
Sbjct: 206 -RRERKKSSKKKKHRSESESK---------------KRKHRSPTPK--SKRKSKDKKRKR 247
Query: 406 MRASSPSPPGRFFLPIPQQWDESSSSSYASNSSS---PSRSPGLSPSSPSP----EFLGL 458
R+++P+P R SSS + S S S + + L+ SPSP G
Sbjct: 248 SRSTTPAPKSRRAHRSTSADSASSSDTSRSRSRSAAAKTHTTALAGRSPSPASGRRGEGD 307
Query: 459 RSISTPSPESLRYALMPEFYALSPVPPEEQAEIESTAHPATPPEP 503
S P S + PE P P E + + AT P P
Sbjct: 308 APFSEPGTTSTQRPSSPETATKQPSSPYEDKDKDKKEKSATRPSP 352
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 79.3 bits (194), Expect = 7e-15
Identities = 102/389 (26%), Positives = 150/389 (38%), Gaps = 48/389 (12%)
Query: 119 SQAAVGPQKATGHADEHLAQTKSPGNSRRRKQPCRNQAAPAQKPPGRRLFPEPLPPSSPG 178
S+ +V P + +G +H K S K P + + + +++ G ++
Sbjct: 426 SRVSVSPGRTSGKVTKHKGTEKRESPSPAPK-PRKVELSESEEDKGGKMAAADSVQQRRQ 484
Query: 179 FRPSSYPCSGASTSSQATQPGPALLSHASEARPATRSRITLVASALRRRASGPGPVIRGC 238
+R + S S SS +++ SH R R + R++ P P R
Sbjct: 485 YRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHS------PSRSASPSP--RKR 536
Query: 239 TAQPGPAFPHRATHLDPA---RLSPESAPGPARRGRASVPGPARRGCDSAPGPARRGRDS 295
+ P R + P R SP AP P RR R P P RR +P P RR
Sbjct: 537 QKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRR-RTPTPPPRRR--TPSPPPRRRSPSP 593
Query: 296 APVSAPRGRDSAPGSARRGRDSAPGPALRVRTARSDAGHRSTSTTPGTGLRSRS-TQQRS 354
S P R +P + R ++P P + R + S R S +P RS T++RS
Sbjct: 594 RRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRS 653
Query: 355 ALLSRRSLSGSADENPSCGTGSERLAFQSRSGSPDPEVPSRASPPVWHAVRMRASSPSPP 414
LS + GS +PS T R SP P R SP +SSP P
Sbjct: 654 PSLSSKHRKGS---SPSRSTREAR--------SPQPN--KRHSPSPRPRAPQTSSSPPPV 700
Query: 415 GRFFLPIPQQWDESSSSSYASNSSSPSRSPGLSPSSPSPEFLGLRSISTPSPESLRYALM 474
R +SSS S SPS P + S +PE ++ ++PSP+S+R
Sbjct: 701 RR----------GASSSPQRRQSPSPSTRP-IRRVSRTPEPKKIKKAASPSPQSVRRVSS 749
Query: 475 PEFYALSPVPPEEQAEIESTAHPATPPEP 503
+ SP P ++ P PP P
Sbjct: 750 SRSVSGSPEPAAKK--------PPAPPSP 770
Score = 62.8 bits (151), Expect = 7e-10
Identities = 102/396 (25%), Positives = 142/396 (35%), Gaps = 78/396 (19%)
Query: 138 QTKSPGNSRRRKQPCRNQAAPAQKPPGRRLFPEPLPPSSPGFRPSSYPCSGASTSSQATQ 197
+++S S RR+ R + +P ++ P RR+ P P R S P SS
Sbjct: 303 RSRSRSYSPRRRPSPRRRPSPRRRTPPRRM------PPPPRHRRSRSPVRRRRRSS---- 352
Query: 198 PGPALLSHASEARPATRSRITLVASALRRRASGPGPVIRGCTAQPGPAFPHRATHLDP-- 255
A LS +S + ++RSR P P + T P
Sbjct: 353 ---ASLSGSSSSSSSSRSR-------------------------SPPKKPPKRTSSPPRK 384
Query: 256 -ARLSPESAPGPARRGRASVPGPARRGCDSAPGPARRGRD-SAPVSAPRGRDSAPGSARR 313
RLSP ++P P RR R S P +P P + R + VS GR S + +
Sbjct: 385 TRRLSPSASP-PRRRHRPSPPATPPPKTRHSPTPQQSNRTRKSRVSVSPGRTSGKVTKHK 443
Query: 314 GRD--SAPGPALRVR-----TARSDAGHRSTSTTPGTGLRSRSTQQRSALLSRRSLSGSA 366
G + +P PA + R + D G + + R Q + + S S S
Sbjct: 444 GTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSSSE 503
Query: 367 DENPSCG------TGSERLAFQSRSGSPDPEVPS---------RASPPVWHAVRMRASSP 411
DE P G R SRS SP P R SP R R+ SP
Sbjct: 504 DERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPSP 563
Query: 412 S-PPGRFFLPIPQQWDESSSSSYASNSSSPSR-SPGL----SPSSPSPEFLGLRSISTPS 465
+ PP R P P + S S SP R SP + SPS P R+ S P
Sbjct: 564 APPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKR----RTASPPP 619
Query: 466 PESLRYALMP---EFYALSPVPPEEQAEIESTAHPA 498
P R + P + SP P + + + P+
Sbjct: 620 PPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPS 655
Score = 45.1 bits (105), Expect = 2e-04
Identities = 81/332 (24%), Positives = 114/332 (34%), Gaps = 45/332 (13%)
Query: 146 RRRKQPCRNQAAPAQKPPGRRL-FPEPLPPSSPGFRPSSYPCSGAS---TSSQATQPGPA 201
+ K+ R + ++ P R+ P P SSP R S + T S++ P P
Sbjct: 156 KEEKESSREKRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAP- 214
Query: 202 LLSHASEARPATRSRITLVASALRRRASGPGPVIRGCTAQPGPAFPHRATHLDPARLSPE 261
E P V + A+ +++ +P P + + + +
Sbjct: 215 ---EKKEKTPELPEPSVKVKEPSVQEATSTSDILKVPKPEPIPEPKEPSPEKNSKKEKEK 271
Query: 262 SAPGPARRGRASVPGPARRGCDSAPGPARRGRDSAPVSAPRGRDSAPGSARRGRDSAPGP 321
P R R+ R S P RR R + +PR R P RR P P
Sbjct: 272 EKTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRR---PSPRRR-----PSP 323
Query: 322 ALRVRTARSDAGHRSTSTTPGTGLRSRSTQQRSALLSRRSLSGSADENPSCGTGSERLAF 381
R R P RSRS +R S SLSGS+ + S
Sbjct: 324 RRRTPPRRMPP--------PPRHRRSRSPVRRRRR-SSASLSGSSSSSSS---------- 364
Query: 382 QSRSGSPDPEVPSRASPPVWHAVRMRASSPSPPGRFFLPIP-------QQWDESSSSSYA 434
SRS SP + P R S P R + S SPP R P P + + S
Sbjct: 365 -SRSRSPPKKPPKRTSSPP-RKTRRLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQSNR 422
Query: 435 SNSSSPSRSPGLSPSSPSPEFLGLRSISTPSP 466
+ S S SPG + S + G +PSP
Sbjct: 423 TRKSRVSVSPGRT-SGKVTKHKGTEKRESPSP 453
Score = 38.1 bits (87), Expect = 0.019
Identities = 42/160 (26%), Positives = 62/160 (38%), Gaps = 12/160 (7%)
Query: 136 LAQTKSPGNS---RRRKQPCRNQAAPAQKPPGRRLFPEPLPPSSPGFRPSSYPCS-GAST 191
+ + +SP S R+ P R+ P +R P P P +P S P GAS+
Sbjct: 648 VTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRP-RAPQTSSSPPPVRRGASS 706
Query: 192 SSQATQPGPALLSHASEARPATRSRITLVASALRRRAS-GPGPVIRGCTAQPGPAFPHRA 250
S Q Q S + RP R T +++ AS P V R +++ P A
Sbjct: 707 SPQRRQ------SPSPSTRPIRRVSRTPEPKKIKKAASPSPQSVRRVSSSRSVSGSPEPA 760
Query: 251 THLDPARLSPESAPGPARRGRASVPGPARRGCDSAPGPAR 290
PA SP + P+ +VP + +P P R
Sbjct: 761 AKKPPAPPSPVQSQSPSTNWSPAVPVKKAKSPTPSPSPPR 800
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 76.3 bits (186), Expect = 6e-14
Identities = 104/391 (26%), Positives = 142/391 (36%), Gaps = 39/391 (9%)
Query: 98 SDRQDCRSPHEVFGCVVPEG---GSQAAVGPQKATGHADEHLAQTKSPGNSRRRKQPCRN 154
S D RSP + EG GSQ + G + + + G S +R
Sbjct: 267 SHYSDSRSPSRLSPKHRDEGRKTGSQRSSGSRSPSPSGGSGWGSPQRNGGSGQRSGAHGG 326
Query: 155 QAAPAQKPPGRRLFPEPLPPSSPGFRPSSYPCSGASTSSQATQP-----GPALLSHASEA 209
+ A PP + P P + P G + S + P G A
Sbjct: 327 RPGSAHSPPDKPSSPSPRVRDKAAAAAPTPPARGKESPSPRSAPSSQGRGGRAAGGAGRR 386
Query: 210 RPATRSRITLVASALRRRASGPGPVIRGCTAQPGPAFPHRATH-LDPARLSPESAPGPAR 268
R R R R R+S P RG +P PA P ++ L AR S +S G
Sbjct: 387 RRRRRRR-------RRSRSSASAPRRRG-RRRPRPAPPRGSSRSLSRARSSSDSGSGRGA 438
Query: 269 RGRASVPGPARRGCDSAPGPARRGRDSAPVSAPRGRDSAPGS-ARRG------RDSAPGP 321
G PG R G +R ++ P + P +PG+ RRG +PGP
Sbjct: 439 PGPGPEPGSER----GHGGHGKRAKERPPRARPASTSPSPGAHGRRGGPEGKSSSRSPGP 494
Query: 322 ALRV-RTARSDAGHRSTSTTPGTGLRSRSTQQRSALLSRRSLSGSADENPSCGTGSERLA 380
R ++RS + RS S SRS + L + G A + + T + R
Sbjct: 495 HPRSWSSSRSPSKSRSRSAEKRPHSPSRSPSPKKPLSRDKDGEGRARHSEAEATRARR-- 552
Query: 381 FQSRSGSPDPEVPSRASPPVWHAVRMRASSPSPPGRFFLPIPQQWDESSSSSYASNSSSP 440
RS S P R P + R S+ P ++ P P SS Y++ S S
Sbjct: 553 ---RSRSYSPIRKRRRDSPSFMEPRRITSARKRPIPYYRPSPSSSSSCLSSDYSTRSHSR 609
Query: 441 SRSPGLSPSSPSPEFLGLRSIS-----TPSP 466
S SPG S S S G RS + TPSP
Sbjct: 610 SPSPGHSHGSYSSRSHGTRSRTRSPSRTPSP 640
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 63.5 bits (153), Expect = 4e-10
Identities = 121/448 (27%), Positives = 162/448 (36%), Gaps = 106/448 (23%)
Query: 117 GGSQAAVGPQKATGHADEHLAQTKSPGNSRRRKQPCRNQAAPAQKPP--GRRLFPEPLPP 174
GG A P+ A T+S G S R PA +PP GR P
Sbjct: 63 GGIGGATIPESAP-----RAGPTRSAGTSSRN---------PASRPPASGRGERAPPAKN 108
Query: 175 SSPGFRPSSYPCSGASTSSQATQPGP----ALLSHASEA----RPATRSRITLVASALRR 226
+SPG P S +S T+PGP L A E + + + +++ RR
Sbjct: 109 TSPG------PVSSPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARR 162
Query: 227 RASGPGPVIRGCTAQPGPAFPHRA----THLDPARLSPESAPGPARRGRASVPGPARRGC 282
SGP P P PA R+ T + R +P + P P G A
Sbjct: 163 DTSGPTP------GTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHS 216
Query: 283 DSAPGPARRGRDSA-----------------PVSAP-RGRDSAPGSARR-GRDSAPGP-- 321
+ P PA R R SA P+S+P R SA G+ R S P P
Sbjct: 217 TTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKG 276
Query: 322 --ALR---VRTARSDA----GHRSTS----TTPGTGLRSRSTQQRSALLSRRSLSGS--- 365
ALR V R DA G S+S +P L+S++ A SL+
Sbjct: 277 LQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAALQSQAPPTLPATPHSSSLTCQLAT 336
Query: 366 ----ADENPSCGTGSERLAFQSRSGSPDPEVPSRASPPVWHAVRMRASS--PSPPGRFFL 419
A +PS + L SP PS+A+ + S PSPP
Sbjct: 337 PLPLAPPSPSAPPSLQTLP------SPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLA 390
Query: 420 PIPQQWDESSSSSYASNSSSPSRSPGLSP-SSPSPEFLGLRSISTPSPESLRYALMPEFY 478
P Q + + SP SP LSP ++PSP+ +P +L L+ +
Sbjct: 391 TPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQ----------APNALAVHLLQAPF 440
Query: 479 ALSPVPPEEQAEIESTAHP-----ATPP 501
+ P PP QA A P ATPP
Sbjct: 441 SPPPSPP-VQAPFSPPASPPVSPSATPP 467
Score = 58.2 bits (139), Expect = 2e-08
Identities = 90/344 (26%), Positives = 123/344 (35%), Gaps = 55/344 (15%)
Query: 187 SGASTSSQATQPGPALLSHASEARPATRSRITLVASALRRRASGPG--PVIRGCTAQPGP 244
+GA+ + A + P LL+ P +T A + A G P+ G
Sbjct: 10 AGAAARTPAAR-APGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGA 68
Query: 245 AFPHRATHLDPARLSPESAPGPARRGRASVPGPARRGCDSAPGPARRGRDSAPVSAPRGR 304
P A P R + S+ PA R AS G P + PVS+P GR
Sbjct: 69 TIPESAPRAGPTRSAGTSSRNPASRPPASGRGER--------APPAKNTSPGPVSSP-GR 119
Query: 305 DSAPGSARRGRDSAPGPALRVRTARSDAGHRSTSTTPGTGLRSRSTQQRSALL--SRRSL 362
A G+ R G G LR+ + A ++T +RSAL +RR
Sbjct: 120 --ASGTTRPGPLGQKG--LRISAEETVARGKAT-----------EAPKRSALSAGARRDT 164
Query: 363 SGSADENPSCGTGSERLAFQSRSGSPDPEVPSRASPP-------VWHAVRMRASSPSPPG 415
SG PS A + G P P +R PP V A + PSP
Sbjct: 165 SGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAA 224
Query: 416 RFFLPIPQQWDESSSSSYASNSSSPSRSPGLS-------------PSSPSPEFLGLRSIS 462
R P + +S S+S++P SP S PS P P+ GL+++
Sbjct: 225 R-RRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPK--GLQALR 281
Query: 463 TPSPESLRYALMPEFYALSPVP---PEEQAEIESTAHPATPPEP 503
P R P LS P P A ++S A P P P
Sbjct: 282 PPQVTPPRKDAAPALGPLSSSPLATPSPSAALQSQAPPTLPATP 325
Score = 52.8 bits (125), Expect = 7e-07
Identities = 106/420 (25%), Positives = 153/420 (36%), Gaps = 71/420 (16%)
Query: 124 GPQKATGHADEHLAQTKSPGNSRRR------KQPCRNQ--------AAPAQKPPGRRLFP 169
GP+K+ A EH SP RR ++P ++PA+ P R P
Sbjct: 204 GPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTP 263
Query: 170 E-PLPPSSP------GFRP--------SSYPCSGASTSSQATQPGP--ALLSHASEARPA 212
P PS P RP + P G +SS P P AL S A PA
Sbjct: 264 RAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAALQSQAPPTLPA 323
Query: 213 TRSRITLVASALRRRASGPGPVIRGCTAQPGPAFPHRATHLDPARLSPESAP-----GPA 267
T +S+L + + P P+ A P P+ P L +P S P
Sbjct: 324 TPH-----SSSLTCQLATPLPL-----APPSPSAPPSLQTLPSPPATPPSQATTSLGSPT 373
Query: 268 RRGRAS-VPGPARRGCDSAPGPARRGRDSAPVSAPRGRDSAPGSARRGRDSAPGP-ALRV 325
+ S +P P + P A P+ AP ++P + S P AL V
Sbjct: 374 LQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAV 433
Query: 326 RTARSDAGHRSTSTTPGTGLRSRSTQQRSALLSRRSLSGSADENPSCGTGSERLAFQSRS 385
++ S P +++ + S +S S + + PS ++ S
Sbjct: 434 HLLQAPF-----SPPPSPPVQAPFSPPASPPVSP-SATPPSQAPPSLAAPPLQVP-PSPP 486
Query: 386 GSPDPEVPSRASPPVWHAVRMRASSP--SPPGRFFLPIPQQWDESSSSSYASNSSSPSRS 443
SP P PS PP +A P +PP + P PQ ++ + S P+
Sbjct: 487 ASP-PMSPSATPPP-------QAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASF 538
Query: 444 PGLSPSSPSPEFLGLRSISTPSPESLRYALMPEFYALSPVPPEEQAEIESTAHPATPPEP 503
PG +P SPS L + ++TP P++ P L VPP A A P PP P
Sbjct: 539 PGQAPFSPSAS-LPMSPLATPPPQAPPVLAAP----LLQVPPSPPASPTLQA-PRRPPTP 592
Score = 48.5 bits (114), Expect = 1e-05
Identities = 96/379 (25%), Positives = 134/379 (35%), Gaps = 38/379 (10%)
Query: 139 TKSPGNSRRRKQPCRNQAAPAQKPPGRRLFPEPLPPSSPGFRPSSYPCSGASTSSQATQP 198
T SP +RR + P P R P PP+ G R S S ST T+P
Sbjct: 171 TPSPAMARRSRAAGTEVGLPRPAPSAR-----PRPPTE-GPRKSVSSASEHST----TEP 220
Query: 199 GPALLSHASEA----RPATRSRITLVASALRRRASGPGPVIRGCTAQPGPAFPHRATHLD 254
PA S RPA+RS ++ A+ L A GP RG PA P +
Sbjct: 221 SPAARRRPSAGGGLQRPASRS-LSSSATPLSSPARS-GPSARGTPR--APAHPSQPKPKG 276
Query: 255 PARLSPESAPGPARRGRASVPGPARRGCDSAPGPARRGRDSAPVSAPRGRDSAPGSARRG 314
L P P R+ A GP + P P+ + AP + P S+ + +
Sbjct: 277 LQALRPPQVT-PPRKDAAPALGPLSSSPLATPSPSAALQSQAPPTLPATPHSSSLTCQLA 335
Query: 315 RD---SAPGPALRVRTARSDAGHRSTSTTPGTGLRSRSTQQRSALLSRRSLSGSADENPS 371
+ P P+ + + + T L S + Q + L LS A P
Sbjct: 336 TPLPLAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQ 395
Query: 372 CGTGSERLAFQSRSGSPDPEVPSRASPPVWHAVRMRASSPSPPGRFFLPIPQQWDESSS- 430
LA P P ASPP+ +P+ L P S
Sbjct: 396 APPA---LALPPLQAPPSPP----ASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPV 448
Query: 431 SSYASNSSSPSRSPGLSPSSPSPEFLGLRSI----STPSPESLRYALMPEFYALSPV--P 484
+ S +SP SP +P S +P L + S P+ + + P A P+ P
Sbjct: 449 QAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAP 508
Query: 485 PEEQAEIESTAHP--ATPP 501
P + A+ A P ATPP
Sbjct: 509 PLQLAKPPPQAPPALATPP 527
Score = 42.0 bits (97), Expect = 0.001
Identities = 85/351 (24%), Positives = 115/351 (32%), Gaps = 84/351 (23%)
Query: 158 PAQKPPGRRLFPEPLPPSSPGFRPSSYPCSGASTSSQATQPGPALLSHASEARPATRSRI 217
P Q PP L P PPS P S P S +T S Q AL H +A
Sbjct: 393 PPQAPPALALPPLQAPPSPPA----SPPLSPLATPS--PQAPNALAVHLLQA-------- 438
Query: 218 TLVASALRRRASGPGPVIRGCTAQPGPAFPHRATHLDPARLSPESAPGPARRGRASVPGP 277
+ P P ++ P P + + P+ P AP VP
Sbjct: 439 --------PFSPPPSPPVQ------APFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPS 484
Query: 278 ARRGCDSAPGPARRGRDSAPVSAPRGRDSAPGSARRGRDSAPGPALRVRTARSDAGHRST 337
+P + P++AP P + AP PAL
Sbjct: 485 PPASPPMSPSATPPPQAPPPLAAP------PLQLAKPPPQAP-PAL-------------- 523
Query: 338 STTPGTGLRSRSTQQRSALLSRRSLSGSADENPSCGTGSERLAFQSRSGSPDPEVPSRAS 397
+T P L S S G A +PS LA +P P+ P +
Sbjct: 524 ATPPLQALPSPPA----------SFPGQAPFSPSASLPMSPLA------TPPPQAPPVLA 567
Query: 398 PPVWHAVRMRASSPSPPGRFFLPIPQQWDESSSSSYASN-------SSSPSRSPGLSPSS 450
P+ PSPP L P++ + S + P P SPSS
Sbjct: 568 APLLQV------PPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSS 621
Query: 451 --PSPEFLGLRSISTPSPESLR-YALMPEFYALSPVPPEEQAEIESTAHPA 498
P+ G S +T +PE LR Y PE A + PP+ + + HPA
Sbjct: 622 TLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAEL---AACHPA 669
Score = 41.2 bits (95), Expect = 0.002
Identities = 69/289 (23%), Positives = 98/289 (33%), Gaps = 52/289 (17%)
Query: 151 PCRNQAAPAQKPPGRR--------LFPEPLPPSSPGFRPSSYPCSGA---------STSS 193
P +P+ PP + L P PP+SP PS+ P A +
Sbjct: 455 PASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAK 514
Query: 194 QATQPGPALLSHASEARPATRSRI----------TLVASALRRRASGPGPVIRGCTAQPG 243
Q PAL + +A P+ + +L S L PV+ Q
Sbjct: 515 PPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVP 574
Query: 244 PAFPHRATHLDPAR---LSPESAPGPARRGRASVPG----PARRGCDSAPGPARRGRDSA 296
P+ P T P R P+++ R A PG P+R + GP G S+
Sbjct: 575 PSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSS 634
Query: 297 PVSAP---RGRDSAP--GSARRGRDSA-------------PGPALRVRTARSDAGHRSTS 338
S P RG DS P G+A A P P L R A +
Sbjct: 635 ATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPA 694
Query: 339 TTPGTGLRSRSTQQRSALLSRRSLSGSADENPSCGTGSERLAFQSRSGS 387
T PG+ + + S G+ D PS GT + A + +G+
Sbjct: 695 TGPGSADGLCTIYETEGPESATPAPGALDPGPSPGTSGGKAAAGAGAGA 743
Score = 37.4 bits (85), Expect = 0.032
Identities = 78/329 (23%), Positives = 112/329 (34%), Gaps = 40/329 (12%)
Query: 157 APAQKPPGRRLFPEPLPPSSPGFRPSSYPCSGASTS-----SQATQPGPALLSHASEARP 211
AP PP + PP+SP PS+ P S A S Q PA + A P
Sbjct: 438 APFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATP 497
Query: 212 ATRSRITLVASALRRRASGP-------GPVIRGCTAQP------GPAFPHRATHLDPARL 258
++ L A L+ P P ++ + P P P + + P
Sbjct: 498 PPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLAT 557
Query: 259 SPESAPGPARRGRASVP--GPARRGCDSAPGPARRGRDSAPVSAPR-----GRDSAPGSA 311
P AP VP PA + P G D++ VS PR P +
Sbjct: 558 PPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTS-VSGPRLTLALAPGPPPPPS 616
Query: 312 RRGRDSAPGPALRVRTARSDAGHRSTSTTPGTGLRS-RSTQQRSALLSRRSLSGSADENP 370
R + GP L AGH S++T+ LR S + A S + A +P
Sbjct: 617 RSPSSTLSGPDL--------AGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHP 668
Query: 371 SCGT--GSERLAFQSRSGSPDPEVPSRASPPVWHAVRMRASSPSPPGRFFLPIPQQWDES 428
+ + + LAF+ G+P P P+ P + + P P P D
Sbjct: 669 AAWSRGPAPPLAFRGAPGAPLPWPPA-TGPGSADGLCTIYETEGPESA--TPAPGALDPG 725
Query: 429 SSSSYASNSSSPSRSPGLSPSSPSPEFLG 457
S + ++ G S SP LG
Sbjct: 726 PSPGTSGGKAAAGAGAGASSRSPKQARLG 754
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 62.8 bits (151), Expect = 7e-10
Identities = 104/389 (26%), Positives = 142/389 (36%), Gaps = 65/389 (16%)
Query: 145 SRRRKQPCRNQAAPAQKPPGRRLFPEPLPPSSPGFRPSSYPCSGASTSSQATQPGP---- 200
S R P R PA GR P +SPG P S +S T+PGP
Sbjct: 73 SAPRAGPTRTSRPPAS---GRGERAPPAKNTSPG------PVSSPGRASGTTRPGPLGQK 123
Query: 201 ALLSHASEA----RPATRSRITLVASALRRRASGPGPVIRGCTAQPGPAFPHRA----TH 252
L A E + + + +++ RR SGP P P PA R+ T
Sbjct: 124 GLRISAEETVARGKATEAPKRSALSAGARRDTSGPTP------GTPSPAMARRSRAAGTE 177
Query: 253 LDPARLSPESAPGPARRGRASVPGPARRGCDSAPGPARRGRDSA--PVSAPRGRDSAPGS 310
+ R +P + P P G A + P PA R R SA + P R + +
Sbjct: 178 VGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSA 237
Query: 311 ARRGRDSAPGPALRVRTARSDAGHRSTSTTPGTGLRSRSTQQRSALLSRRSLSGSADENP 370
+ GP+ R T R+ A H S G AL + D P
Sbjct: 238 TPLSSPARSGPSAR-GTPRAPA-HPSQPKPKGL----------QALRPPQVTPPRKDAAP 285
Query: 371 SCG-TGSERLAFQSRSGSPDPEVP----SRASPPVWHAVRMRASSPSP---PGRFFLPIP 422
+ G S LA S S P P P + SPP + S SP FLP P
Sbjct: 286 ALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSP 345
Query: 423 QQWDESSSSSYASNSSS--PSRSPGLSPSSPSPEFLGLRSISTPSPE---SLRYALMPEF 477
++ A + + P ++P P+SP L ++TPSP+ +L L+
Sbjct: 346 PLSPLATPPPQAPPALALPPLQAPPSPPASPP-----LSPLATPSPQAPNALAVHLLQAP 400
Query: 478 YALSPVPPEEQAEIESTAHP-----ATPP 501
++ P PP QA A P ATPP
Sbjct: 401 FSPPPSPP-VQAPFSPPASPPVSPSATPP 428
Score = 55.8 bits (133), Expect = 9e-08
Identities = 96/397 (24%), Positives = 143/397 (36%), Gaps = 55/397 (13%)
Query: 124 GPQKATGHADEHLAQTKSPGNSRRRKQPCRNQAAPAQKPPGRRLFPEPLPPSSPGFRPSS 183
GP+K+ A EH SP RR + Q+P R L P SSP
Sbjct: 195 GPRKSVSSASEHSTTEPSPAARRR-----PSAGGGLQRPASRSLSSSATPLSSP------ 243
Query: 184 YPCSGASTSSQATQPGPALLSHASEARPATRSRITLVASALRRRASGP--GPVIRGCTAQ 241
+ + S++ T PA H S+ +P + R+ + P GP+ A
Sbjct: 244 ---ARSGPSARGTPRAPA---HPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLAT 297
Query: 242 PGPAFPHRATHLDPARLSPESAPGPARRGRASVPGPARRGCDS-APGPARRGRDSAPVSA 300
P P+ P + + P P + S+ P + S P P + P A
Sbjct: 298 PSPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQA 357
Query: 301 P--------RGRDSAPGSARRGRDSAPGP----ALRVRTARSDAGHRSTSTTPGTGLRSR 348
P + S P S + P P AL V ++ S P +++
Sbjct: 358 PPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQA-----PFSPPPSPPVQAP 412
Query: 349 STQQRSALLSRRSLSGSADENPSCGTGSERLAFQSRSGSPDPEVPSRASPPVWHAVRMRA 408
+ S +S S + + PS ++ S SP P PS PP +A
Sbjct: 413 FSPPASPPVS-PSATPPSQAPPSLAAPPLQVP-PSPPASP-PMSPSATPPP-------QA 462
Query: 409 SSP--SPPGRFFLPIPQQWDESSSSSYASNSSSPSRSPGLSPSSPSPEFLGLRSISTPSP 466
P +PP + P PQ ++ + S P+ PG +P SPS L + ++TP P
Sbjct: 463 PPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSAS-LPMSPLATPPP 521
Query: 467 ESLRYALMPEFYALSPVPPEEQAEIESTAHPATPPEP 503
++ P L VPP A A P PP P
Sbjct: 522 QAPPVLAAP----LLQVPPSPPASPTLQA-PRRPPTP 553
Score = 38.1 bits (87), Expect = 0.019
Identities = 102/446 (22%), Positives = 148/446 (33%), Gaps = 52/446 (11%)
Query: 42 AASVTTVSSQASPSGGAALSSSTAGSSAAAATSAAIFITDEASGLPIIAAVLTERHSDRQ 101
++ + T S A PS A S T S A S A + G P + A + S
Sbjct: 292 SSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQAT----TSLGSPTLQATHSFLPSP-- 345
Query: 102 DCRSPHEVFGCVVPEGGSQAAVGPQKA--TGHADEHLAQTKSPGNSRRRKQPCRNQAAPA 159
P P+ A+ P +A + A L+ +P AP
Sbjct: 346 ----PLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPF 401
Query: 160 QKPPGRRLFPEPLPPSSPGFRPSSYPCSGASTS-----SQATQPGPALLSHASEARPATR 214
PP + PP+SP PS+ P S A S Q PA + A P +
Sbjct: 402 SPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQ 461
Query: 215 SRITLVASALRRRASGP-------GPVIRGCTAQP------GPAFPHRATHLDPARLSPE 261
+ L A L+ P P ++ + P P P + + P P
Sbjct: 462 APPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPP 521
Query: 262 SAPGPARRGRASVP--GPARRGCDSAPGPARRGRDSAPVSAPR-----GRDSAPGSARRG 314
AP VP PA + P G D++ VS PR P +R
Sbjct: 522 QAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTS-VSGPRLTLALAPGPPPPPSRSP 580
Query: 315 RDSAPGPALRVRTARSDAGHRSTSTTPGTGLRS-RSTQQRSALLSRRSLSGSADENPSCG 373
+ GP L AGH S++T+ LR S + A S + A +P+
Sbjct: 581 SSTLSGPDL--------AGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAW 632
Query: 374 T--GSERLAFQSRSGSPDPEVPSRASPPVWHAVRMRASSPSPPGRFFLPIPQQWDESSSS 431
+ + LAF+ G+P P P+ P + + P P P D S
Sbjct: 633 SRGPAPPLAFRGAPGAPLPWPPA-TGPGSADGLCTIYETEGPESA--TPAPGALDPGPSP 689
Query: 432 SYASNSSSPSRSPGLSPSSPSPEFLG 457
+ ++ G S SP LG
Sbjct: 690 GTSGGKAAAGAGAGASSRSPKQARLG 715
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 60.5 bits (145), Expect = 4e-09
Identities = 113/477 (23%), Positives = 167/477 (35%), Gaps = 47/477 (9%)
Query: 43 ASVTTVSSQASPSGGAALSSSTAGSSAAAATSAAI---FITDEASGLPIIAAVLTERHSD 99
A T ++ SP GG A S + AAT + T G P A
Sbjct: 1194 APTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPP---- 1249
Query: 100 RQDCRSPHEVFGCVVPEGGSQ--AAVGPQKATGHADEHLAQTKSPGNSRRRKQPCRNQAA 157
SP P+G AA P G A +P P +
Sbjct: 1250 -----SPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVT----PPSPKGG 1300
Query: 158 PAQKPPGRRLFPEPLPPSSPGFRPSSYPCSGASTSSQATQPGP------ALLSHASEARP 211
PA PP P P SP P + P GA T T P P + +S+ P
Sbjct: 1301 PATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGP 1360
Query: 212 ATRSRITLVASALRRRASGPGPVIRGCTAQPGPAFPH-RATHLDPA--RLSPESAPG-PA 267
T S + GP + + + GPA P + PA LSP+ AP P
Sbjct: 1361 TTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPV 1420
Query: 268 RRGRASVPGPARRGCDSAPGPARRGRDSAP-VSAPRGRDSAPGSARRGRDSAPGPALRVR 326
R A+ P +G + P AP SAP+G + P S + PA+
Sbjct: 1421 TREGAATPS---KGDLTPPAVTPVSLKKAPATSAPKGGPATPSS----KGDPTLPAVTPP 1473
Query: 327 TARSDAGHRSTSTTPGTGLRSRSTQQRSALLSRRSLSGSADENPSCGTGSERLAFQSRSG 386
+ + + +T+ + A + S E P+ S R +
Sbjct: 1474 SPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPAT-PSSRRDPIAPTAT 1532
Query: 387 SPDPEVPSRASPPVWHAVRMRASSPSPPGRFFLPIPQQWDESSSSSYASNSSSPSRSPGL 446
+ P+ +P + + PSP +P P++ + SS A SS P+ +P
Sbjct: 1533 LLSKKTPATLAPKE-ALIPPAMTVPSPKKTPAIPTPKEAPATPSSKEA--SSPPAVTPST 1589
Query: 447 SPSSPSP-EFLGLRSISTPSPESLRYALMPEFYALSPVPPEE-QAEIESTAHPATPP 501
+PSP E L ++++PSP+ P A++P PE+ A P +PP
Sbjct: 1590 YKGAPSPKELLIPPAVTSPSPKE-----APTPPAVTPPSPEKGPATPAPKGTPTSPP 1641
Score = 53.5 bits (127), Expect = 4e-07
Identities = 102/445 (22%), Positives = 157/445 (35%), Gaps = 59/445 (13%)
Query: 43 ASVTTVSSQASPSGGAALSSSTAGSSAAAATSAAIFITDEASGLPIIAAVLTERHSDRQD 102
A ++ SP GG A S + A T + G P AA + +
Sbjct: 985 APTPPAATPPSPKGGPATPSPKGAPTPPAVTPPS------PKGSP--AATPFPKGASTPP 1036
Query: 103 CRSPHEVFGCV----VPEGG--SQAAVGPQKATGHADEHLAQTKSPGNSRRRKQPCRNQA 156
+P G +P+G + AA P G A L +P + P +
Sbjct: 1037 AATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAAT----PPSPKG 1092
Query: 157 APAQKPPGRRLFPEPLPPSSPGFRPSSYPCSGASTSSQATQPGPALLSHASEARPATRSR 216
PA P P P SP ++ P GA T+ AT P P A P +
Sbjct: 1093 GPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSP----KGGLATPPPKGA 1148
Query: 217 ITLVASALRRRASG-PGPVIRGCTAQPGPAFPHRATHLDPARLSPESAP------GPARR 269
T A+ G P +G P P L A SP+ AP P+ +
Sbjct: 1149 PTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGL--ATPSPKGAPTTPAATPPSPK 1206
Query: 270 GRASVPGPARRGCDSAPG---PARRGRDSAPVSAPRGRDSAPGS---ARRGRDSAPGPAL 323
G + P P +G + P P+ +G + P +P+G + P + + +G + P P
Sbjct: 1207 GGLATPSP--KGAPTTPAATPPSPKGGLATP--SPKGAPTTPAATPPSPKGGPATPPP-- 1260
Query: 324 RVRTARSDAGHRSTSTTPGTGLRSRSTQQRSALLSRRSLSGSADENPSCGTGSERLAF-Q 382
+ A + S G A+++ S G +P G + A
Sbjct: 1261 --KGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPP 1318
Query: 383 SRSGSPDPEVPSRASPPVWHAVRMRASSPSPPGRFFLPIPQQWDESSSSSYASNSSSPSR 442
S GSP P A P + PSP G LP +++ S ++PS
Sbjct: 1319 SPKGSPGTPPPKGAPTP------PAVTPPSPKGTPTLP-------ATTPSSKGGPTTPSS 1365
Query: 443 SPGLSPSSPSPEFLGLRSISTPSPE 467
G +P + +P G +++ PSP+
Sbjct: 1366 KEGPTPPAATPSHKGGPAMTPPSPK 1390
Score = 45.8 bits (107), Expect = 9e-05
Identities = 118/527 (22%), Positives = 169/527 (32%), Gaps = 79/527 (14%)
Query: 37 GNQDPAASVTTVSSQASPSGGAAL---SSSTAGSSAAAATSAAIFITDEASGLPIIAAV- 92
G+ P + +SS SP + L S S GS + AT+ + G P +AV
Sbjct: 813 GSAGPDTPIGNLSSPVSPVEASFLPENSLSFQGSKDSPATTHSP-TPPSPKGAPTPSAVT 871
Query: 93 -LTERHSDRQDCRSPH-EVFGCVVPEGGSQAAVGPQKA-----TGHADEHLAQTKSPGNS 145
L+ + +P V P+ G A P++A T + + T +P
Sbjct: 872 PLSPKGVTLPPKETPTPSVVNLPFPKEGP-ATPAPKQAPALSMTSSSPKKARATPAPKGI 930
Query: 146 RRRKQPCRNQAAPAQKPPGRRLFPE-------PLPPS----SPGFRPSSYPCSGASTSSQ 194
P PA PP + P P PP+ SP P++ GA T
Sbjct: 931 PASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPA 990
Query: 195 ATQPGPALLSHASEARPATRSRITLVASALRRRASGPG--PVIRGCTAQPGPAFPH---- 248
AT P P A P+ + T A P P +G + P P
Sbjct: 991 ATPPSP----KGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGS 1046
Query: 249 -------RATHLDPARLSPESAPGPARRGRASVPGPARRGCDSAPGPARRGRDSAPVSAP 301
+ PA P GPA P P + P P +P AP
Sbjct: 1047 PAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPP---AATPPSPKGGPATPSPKGAP 1103
Query: 302 RGRDSAPGSARRGRDSAP---GPALRVRTARSDAGHRSTSTTPGTGLRSRSTQQRSALLS 358
+ P S + G + P P T S G +T G +T
Sbjct: 1104 MPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGL 1163
Query: 359 RRSLSGSADENPSCGTGSER--LAFQSRSGSPDPEVPSRASP--------PVWHAVRMRA 408
A P+ S + LA S G+P + SP P A
Sbjct: 1164 ATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAA 1223
Query: 409 SSPSPPGRFFLPIPQQWDESSSSSYASNSSSPSRSPGLSPSSPSPEFLGLRSISTPSPES 468
+ PSP G P P + + ++ A+ SP P P +P + +P S
Sbjct: 1224 TPPSPKGGLATPSP----KGAPTTPAATPPSPKGGPATPPPKGAP------TPPAATPPS 1273
Query: 469 LRYALMPEFYALSPVP----PEEQAEIESTAHP--------ATPPEP 503
L+ L + +P P P +T+ P ATPP P
Sbjct: 1274 LKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSP 1320
Score = 40.8 bits (94), Expect = 0.003
Identities = 110/530 (20%), Positives = 179/530 (33%), Gaps = 104/530 (19%)
Query: 41 PAASVTTVSSQASPSGGAALSSSTAGSSAAAATSA----------------AIFITDEAS 84
P + T ++ S GG SS G + AAT + AI
Sbjct: 1343 PKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAI---PSPK 1399
Query: 85 GLPIIAAVLTERHSDRQDCRSPHEVFGCVVPEGG------------------SQAAVGPQ 126
G P AV+ S ++ +P G P G S GP
Sbjct: 1400 GDPTSPAVIP--LSPKKAPATPVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPA 1457
Query: 127 KATGHADEHLAQTKSPGNSRRRKQPCRNQAAPAQKPPGRRLFPEPL-PPSSPGFRPSSYP 185
+ D L P ++ P Q A + P P P+ P+ P PSS P
Sbjct: 1458 TPSSKGDPTLPAVTPPS---PKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSS-P 1513
Query: 186 CSGASTSSQATQPGPALLSHASEARPATRS-RITLVASALRRRASGPGPVIRGCTAQPGP 244
+T S P + S+ PAT + + L+ A+ + P I T + P
Sbjct: 1514 KEVPATPSSRRDPIAPTATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIP--TPKEAP 1571
Query: 245 AFPHRATHLDPARLSPESAPGPARRGRASVP----GPARRGCDSAPGPARRGRDSAPVS- 299
A P P ++P + G +P P+ + + P + P +
Sbjct: 1572 ATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTSPSPKEAPTPPAVTPPSPEKGPATP 1631
Query: 300 APRGRDSAPGSARRG-RDSAPGPALRVRTARSDAGHRSTSTTPGTGLRSRSTQQRSALLS 358
AP+G ++P +DS PA + G + G + T + L++
Sbjct: 1632 APKGTPTSPPVTPSSLKDSPTSPA----SVTCKMGATVPQASKGLPAKKGPTALKEVLVA 1687
Query: 359 RRSLSGSADENPSCGTGSERLAFQSRSGS-------PDPEVPSRASPPVWHAVRMRASSP 411
A E+ T R Q++ S PDP + + P + +P
Sbjct: 1688 ------PAPESTPIITAPTRKGPQTKKSSATSPPICPDPSAKNGSKGP------LSTVAP 1735
Query: 412 SPPGRFFLPIPQQWDESSSSSYASNSSSPSRSPGLSPSS------------PSPEFLGLR 459
+P LP+ + +++ AS+S +P S +S P PE +
Sbjct: 1736 AP----LLPVQKDSSKTAKGKDASHSPKGPLAPPESKASTPLTAAAFEKVLPKPESASVS 1791
Query: 460 SISTPSPESLRYALMPEFYALSPVPPEEQ-------AEIESTAHPATPPE 502
+ +P P SL A P + +PP++Q +ES + P P +
Sbjct: 1792 AAPSP-PVSLPLAPSP----VPTLPPKQQFLPSSPGLVLESPSKPLAPAD 1836
>gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]
Length = 1682
Score = 60.1 bits (144), Expect = 5e-09
Identities = 108/419 (25%), Positives = 132/419 (31%), Gaps = 105/419 (25%)
Query: 141 SPGNSRRRKQPCRNQAAPAQKPPGRRLFPEPLPPSSPGFRPSSYPCSGASTSS--QATQP 198
SPG RRR C ++ PPG L P PLPP P P P G +TS Q T+P
Sbjct: 224 SPGGKRRRG--CNSEQTGL--PPGLPLPPPPLPPPPPPPPPPPPPLPGLATSPPFQLTKP 279
Query: 199 GPALLSHASEARPATRSRITLVASALRRRASGPGPVIRGCTAQPGPAFPHRATHLDPARL 258
G H P + R P P P PA+ H RL
Sbjct: 280 GLWSTLHGDAWGPERKGSAPPERQEQRHSLPHPYP-------YPAPAY---TAHPPGHRL 329
Query: 259 SPESAPGPARRGRASVPGPARRGCDSAPGPARRGRDSAPVSAPRGRDSAPGSARRGR-DS 317
P + PGP R PG GC P + P G D +R R DS
Sbjct: 330 VPAAPPGPGPR----PPGAESHGC-------------LPATRPPGSDLRESRVQRSRMDS 372
Query: 318 APGPALRVR--------------TARSDAGHRSTST-----TPGTGLRSRSTQQRSAL-- 356
+ PA T S + S++T P G+ Q AL
Sbjct: 373 SVSPAATTACVPYAPSRPPGLPGTTTSSSSSSSSNTGLRGVEPNPGIPGADHYQTPALEV 432
Query: 357 --LSRRSLSGSADENPSCG--TGSERLAFQSRSGSPDPEVPSR----ASPPVW-HAVRMR 407
R S + P G + L+ SP P R PP W R
Sbjct: 433 SHHGRLGPSAHSSRKPFLGAPAATPHLSLPPGPSSPPPPPCPRLLRPPPPPAWLKGPACR 492
Query: 408 AS------------------SPSPP-------------GRFFL-----PIPQQWDESSSS 431
A+ P+PP RF + P ++S
Sbjct: 493 AAREDGEILEELFFGTEGPPRPAPPPLPHREGFLGPPASRFSVGTQDSHTPPTPPTPTTS 552
Query: 432 SYASNSSSPSRSPGLSPSSPSPEFLGLRSISTPSPESLRY-----ALMPEFYALSPVPP 485
S SNS S S SP S P P +L P P S L+P AL P PP
Sbjct: 553 SSNSNSGSHSSSPAGPVSFPPPPYLARSIDPLPRPPSPAQNPQDPPLVPLTLALPPAPP 611
Score = 45.1 bits (105), Expect = 2e-04
Identities = 92/389 (23%), Positives = 126/389 (32%), Gaps = 57/389 (14%)
Query: 121 AAVGPQKATGHADEH--LAQTKSPGNSRRRKQPCRNQAAPAQKPPGRRL---FPEPLPPS 175
A GP A+ H L T+ PG+ R + R++ + P + PP
Sbjct: 333 APPGPGPRPPGAESHGCLPATRPPGSDLRESRVQRSRMDSSVSPAATTACVPYAPSRPPG 392
Query: 176 SPGFRPSSYPCSGASTSSQATQPGPALLSHASEARPAT----RSRITLVASALRRRASGP 231
PG SS S ++T + +P P + PA R+ A + R+ G
Sbjct: 393 LPGTTTSSSSSSSSNTGLRGVEPNPGIPGADHYQTPALEVSHHGRLGPSAHSSRKPFLGA 452
Query: 232 GPVIRGCTAQPGPAFPHRATHLDPARLSPESAPGPARRGRASVPGPARRGCDSAPGPARR 291
+ PGP+ P P L P P A + GPA R
Sbjct: 453 PAATPHLSLPPGPSSPPPPP--CPRLLRPPPPP-------AWLKGPACRAAREDGEILEE 503
Query: 292 ---GRDSAPVSAPRGRDSAPGSARRGRDSAPGPALRVRTARSDAGHRSTSTTPGTGLRSR 348
G + P AP P R P PA R D+ T TP T
Sbjct: 504 LFFGTEGPPRPAP------PPLPHREGFLGP-PASRFSVGTQDSHTPPTPPTPTTS---- 552
Query: 349 STQQRSALLSRRSLSGSADENPSCGTGSERLAFQSRSGSPDPEVPSRASPPVWHAVRMRA 408
S S SGS +P+ + +RS P P PS A P
Sbjct: 553 ---------SSNSNSGSHSSSPAGPVSFPPPPYLARSIDPLPRPPSPAQNP--------Q 595
Query: 409 SSPSPPGRFFLP--IPQQWDESSSSSYASNSS-----SPSRSPGLSPSSPSPEFLGLRSI 461
P P LP P +++S S+ S S ++P + P P P L
Sbjct: 596 DPPLVPLTLALPPAPPSSCHQNTSGSFRRPESPRPRVSFPKTPEVGP-GPPPGPLSKAPQ 654
Query: 462 STPSPESLRYALMPEFYALSPVPPEEQAE 490
P A P + P P E+Q E
Sbjct: 655 PVPPGVGELPARGPRLFDFPPTPLEDQFE 683
Score = 39.7 bits (91), Expect = 0.006
Identities = 81/388 (20%), Positives = 131/388 (33%), Gaps = 44/388 (11%)
Query: 115 PEGGSQAAVGPQKATGHADEHLAQTKSPGNSRRRKQPCRNQAAPAQK-PPGRRLFPEPLP 173
P + P A T + ++ P P K PP + P P P
Sbjct: 737 PTDTAPTTTAPAVAVTTTTTTTTTTTATQEEEKKPPPALPPPPPLAKFPPPSQPQPPPPP 796
Query: 174 PSSPGFRPSSYP--------CSGASTSSQATQPGPALLSHASEARPATRSRITLVASALR 225
P SP S C + ++ +T+PGP + S P+ + + ++A
Sbjct: 797 PPSPASLLKSLASVLEGQKYCYRGTGAAVSTRPGPLPTTQYSPGPPSGATALPPTSAAPS 856
Query: 226 RRASGPGPVIRGC---TAQPGPAFPHRATHLD--PARLSPESAPG----PARRGRASVPG 276
+ S P P + GP R + P ++P P P R + V
Sbjct: 857 AQGS-PQPSASSSSQFSTSGGPWARERRAGEEPVPGPMTPTQPPPPLSLPPARSESEVLE 915
Query: 277 PARRGCD--------SAPGPARRGRDSAPVSAPRGRDSAPGSARR--GRDSAPGPALRVR 326
R C+ SA PA + P + R P A+ G +A + + R
Sbjct: 916 EISRACETLVERVGRSATDPADPVDTAEPADSGTERLLPPAQAKEEAGGVAAVSGSCKRR 975
Query: 327 TARSDAGHRSTSTTPGTGLRSRSTQQRSALLSRRSLSGSADENPSCGTGSERLAFQSRSG 386
HR + R + R+ ++ S + SE + + +S
Sbjct: 976 QKEHQKEHRRHRRACKDSVGRRPREGRAKAKAKVPKEKSRRVLGNLDLQSEEIQGREKS- 1034
Query: 387 SPDPEVPSRASPPVWHAVRMRASSPSPPGRFFLPIPQQWDESSSSSYASNSSSPSRSPGL 446
PD S+A PP ++P+PP P P S+S + +PG
Sbjct: 1035 RPDLGGASKAKPP---------TAPAPPS---APAPSAQPTPPSAS-VPGKKAREEAPG- 1080
Query: 447 SPSSPSPEFLGLRSISTPSPESLRYALM 474
P + L LRS+S P+ L+ L+
Sbjct: 1081 PPGVSRADMLKLRSLSEGPPKELKIRLI 1108
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 59.7 bits (143), Expect = 6e-09
Identities = 109/422 (25%), Positives = 162/422 (38%), Gaps = 65/422 (15%)
Query: 111 GCVVPEGGSQAAVGPQKATGHADEHLAQTKSPGNSRRRKQPCRNQAAPAQKPPGRRLFPE 170
G +PE +A GP ++ G + + A R P +N +
Sbjct: 67 GATIPESAPRA--GPTRSAGTSSRNPASRPPASGRGERAPPAKNTS-------------- 110
Query: 171 PLPPSSPGFRPSSYPCSGASTSSQATQPGPALLSHASEAR-PATRS-RITLVASALRRRA 228
P P SSPG SG + Q G + + + AR AT + + + +++ RR
Sbjct: 111 PGPVSSPG------RASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDT 164
Query: 229 SGPGPVIRGCTAQPGPAFPHRA----THLDPARLSPESAPGPARRGRASVPGPARRGCDS 284
SGP P P PA R+ T + R +P + P P G A +
Sbjct: 165 SGPTP------GTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTT 218
Query: 285 APGPARRGRDSA--PVSAPRGRDSAPGSARRGRDSAPGPALRVRTARSDAGHRSTSTTPG 342
P PA R R SA + P R + + + GP+ R T R+ A H S G
Sbjct: 219 EPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSAR-GTPRAPA-HPSQPKPKG 276
Query: 343 -TGLR--SRSTQQRSALLSRRSLSGSADENPS-CGTGSERLAFQSRSGSPDPEVPSRASP 398
LR + ++ A + LS S PS GT + + + +P P SP
Sbjct: 277 LQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAATPLP-ATLPPSP 335
Query: 399 PVWHAVRMRASSPS-PPGRFFLPIPQQWDESSSSSYASNSSSPSRSPGL----------- 446
P+ + + SPS PP LP P S + S ++ P ++P
Sbjct: 336 PLATPLPLAPPSPSAPPSLQTLPSPPATPPSQAP--PSMTTPPMQAPPSLQTIPPIQVPH 393
Query: 447 SPSSPS----PEFLGLRSI-STPSPESLRYALMPEFYALSPVPPEEQAEIESTAHPA-TP 500
S +SPS P L L S+ +T S S F +S P + QA + S + PA TP
Sbjct: 394 SLTSPSLQAPPSPLALSSLQATTSLGSPTLQATHSFLTMS--PRQTQASLTSPSRPASTP 451
Query: 501 PE 502
P+
Sbjct: 452 PD 453
Score = 58.2 bits (139), Expect = 2e-08
Identities = 88/337 (26%), Positives = 125/337 (37%), Gaps = 68/337 (20%)
Query: 214 RSRITLVASALRRRASGPGPVIRGCTAQPGPAFPHRATHLDPARLSPESAPGPARR---- 269
R + A+A A PG + T +P P P + PA L A G R
Sbjct: 5 RDKAKAGAAARTPAARAPGLL----TPRP-PGSPRPPPPVTPAALRVLGAAGAVGRKPLA 59
Query: 270 ------GRASVPGPA-RRGCDSAPGPARRGRDSAPVSAPRGRDSAPGSARRGRDSAPGPA 322
G A++P A R G + G + R S P ++ RG + P ++++PGP
Sbjct: 60 ERAGGIGGATIPESAPRAGPTRSAGTSSRNPASRPPASGRGERAPPA-----KNTSPGPV 114
Query: 323 LRVRTARSDAGHRSTSTTPG-------------TGLRSRSTQ--QRSALLS--RRSLSGS 365
S G S +T PG T R ++T+ +RSAL + RR SG
Sbjct: 115 -------SSPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGP 167
Query: 366 ADENPSCGTGSERLAFQSRSGSPDPEVPSRASPP-------VWHAVRMRASSPSPPGRFF 418
PS A + G P P +R PP V A + PSP R
Sbjct: 168 TPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARR- 226
Query: 419 LPIPQQWDESSSSSYASNSSSPSRSPGLS-------------PSSPSPEFLGLRSISTPS 465
P + +S S+S++P SP S PS P P+ GL+++ P
Sbjct: 227 RPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPK--GLQALRPPQ 284
Query: 466 PESLRYALMPEFYALSPVPPEEQAEIESTAHPATPPE 502
R P LS P + + A P PP+
Sbjct: 285 VTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPD 321
Score = 53.1 bits (126), Expect = 6e-07
Identities = 108/401 (26%), Positives = 149/401 (37%), Gaps = 61/401 (15%)
Query: 124 GPQKATGHADEHLAQTKSPGNSRRRKQPCRNQAAPAQKPPGRRLFPEPLPPSSPGFRPSS 183
GP+K+ A EH SP RR + Q+P R L P SSP
Sbjct: 204 GPRKSVSSASEHSTTEPSPAARRR-----PSAGGGLQRPASRSLSSSATPLSSP------ 252
Query: 184 YPCSGASTSSQATQPGPALLSHASEARPATRSRITL---------VASALRRRASGP--G 232
+ + S++ T PA H S+ +P + A AL +S P
Sbjct: 253 ---ARSGPSARGTPRAPA---HPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLAT 306
Query: 233 PVIRGCTAQPGPAFPHRATHLDPARLSPESAPGPARRGRASVPGPARRGCDSAPGPARRG 292
P G A+P P + AT L PA L P S P + P P SAP P+ +
Sbjct: 307 PSPSGTKARPVPPPDNAATPL-PATL-PPSPP-------LATPLPLAPPSPSAP-PSLQT 356
Query: 293 RDSAPVSAPRGRDSAPGSARRGRDSAPGPALRVRTARSDAGHRSTSTT---PGTGLRSRS 349
S P + P AP S AP P+L+ H TS + P + L S
Sbjct: 357 LPSPPATPP---SQAPPSMTTPPMQAP-PSLQT-IPPIQVPHSLTSPSLQAPPSPLALSS 411
Query: 350 TQQRSALLSRRSLSGSADENPSCGTGSERLAFQSRSGSPDPEVPS-------RASPPVWH 402
Q ++L S + + S L SR S P+ P ASPP+
Sbjct: 412 LQATTSLGSPTLQATHSFLTMSPRQTQASLTSPSRPASTPPDSPPLQAPLSLPASPPLQT 471
Query: 403 AVRMRASSPSPPGRFFLPIPQQWDESSSSSYASNSSSPSRSPGLSPSSPSPEFLGLRSIS 462
++ S S P P Q + SS AS+S S + P + L S+
Sbjct: 472 SLSPAVSPLSSPLTIH---PLQ----ALSSLASHSPQAPLSSLIMPPLETQSSLAPPSLQ 524
Query: 463 TPSPESLRYALMPEFYALSPVPPEEQAEIESTAHPATPPEP 503
TP P SL + +L+P P + + +T H TPP P
Sbjct: 525 TP-PASLTTPPLENLPSLAPPPLQTASAPLTTPHLETPPCP 564
Score = 50.1 bits (118), Expect = 5e-06
Identities = 127/487 (26%), Positives = 165/487 (33%), Gaps = 76/487 (15%)
Query: 48 VSSQASPSGGAALSS------STAGSSAAAA--TSAAIFITDEASGLPIIA--------A 91
+SS AS S A LSS T S A + T A T LP +A A
Sbjct: 492 LSSLASHSPQAPLSSLIMPPLETQSSLAPPSLQTPPASLTTPPLENLPSLAPPPLQTASA 551
Query: 92 VLTERHSDRQDC------RSPHEVFGCVVPEGGSQAAVGPQKATGHADEHLAQTKSPGNS 145
LT H + C ++P PE S A P +A LA G
Sbjct: 552 PLTTPHLETPPCPAPCPLQAPPSPLTTPPPETPSSIATPPPQAP----PALASPPLQGLP 607
Query: 146 RRRKQPCRNQAAPAQKPPGRRLFPEPLPPSSPGFRPSSYPCSGASTSSQATQPGPALLSH 205
P P Q PP L P PPS P S P S +T S Q AL H
Sbjct: 608 SPPLSPLATP--PPQAPPXLALPPLQAPPSPPA----SPPLSPLATPS--PQAPNALAVH 659
Query: 206 ASEARPATRSRITLVASALRRRASGPGPVIRGCTAQPGPAFPHRATHLDPARLSPESAPG 265
+A P + V + AS P + P A P A P P S P
Sbjct: 660 LLQA-PFSPPPSPPVQAPFSPPAS---PPVSPSATPPSQAPPSLAA---PPLQVPPSPPA 712
Query: 266 PARRGRASVPGPARRGCDSAPGPARRGRDSAPVSAPRGRDSAPGSARRGR--DSAPGPAL 323
++ P P AP P P S P +P + R P L
Sbjct: 713 SPPMSPSATPPP------QAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPL 766
Query: 324 RVRTARSDAGHRS-TSTTPGTGLRSRSTQQRSALLS-RRSLSGSADENPSCGTGSERLAF 381
+V + + S + P + +T AL S S G A +PS LA
Sbjct: 767 QVPPSPPASLPMSPLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLA- 825
Query: 382 QSRSGSPDPEVPSRASPPVWHAVRMRASSPSPPGRFFLPIPQQWDESSSSSYASN----- 436
+P P+ P + P+ PSPP L P++ + S
Sbjct: 826 -----TPPPQAPPVLAAPLLQV------PPSPPASPTLQAPRRPPTPGPDTSVSGPRLTL 874
Query: 437 --SSSPSRSPGLSPSS--PSPEFLGLRSISTPSPESLR-YALMPEFYALSPVPPEEQAEI 491
+ P P SPSS P+ G S +T +PE LR Y PE A + PP+ +
Sbjct: 875 ALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAEL-- 932
Query: 492 ESTAHPA 498
+ HPA
Sbjct: 933 -AACHPA 938
Score = 35.4 bits (80), Expect = 0.12
Identities = 84/373 (22%), Positives = 121/373 (32%), Gaps = 63/373 (16%)
Query: 157 APAQKPPGRRLFPEPLPPSSPGFRPSSYPCSGASTS-----SQATQPGPALLSHASEARP 211
AP PP + PP+SP PS+ P S A S Q PA + A P
Sbjct: 663 APFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATP 722
Query: 212 ATRSRITLVASALRRRASGPG--PVIRGCTAQPG------------PAFPHRATHLDP-A 256
++ L A L+ S P P+ T P P P + + P A
Sbjct: 723 PPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLA 782
Query: 257 RLSPESAPGPARRGRASVPGPARRGCDSAP---------GPARRGRDSAP-------VSA 300
+ P++ P A ++P P AP P AP +
Sbjct: 783 KPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQV 842
Query: 301 PRGRDSAPGSARRGRDSAPGPALRVRTARSDAGHRSTSTTPGTGLRSRSTQQRSALLSRR 360
P ++P R PGP V R P + RS S+ L+
Sbjct: 843 PPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPS--RSPSSTLSGPDLAGH 900
Query: 361 SLSGSADENPSCGTGSERLAFQSRSGSPDPEVPSRASPPVWHAVRMRASSPSPPGRFF-- 418
S S ++ G S + S PD E+ + P W + P+PP F
Sbjct: 901 SSSATSTPEELRGYDSGPEGGAAASPPPDAEL-AACHPAAW------SRGPAPPLAFRGA 953
Query: 419 ----LPIPQQWDESSSSSYAS-----NSSSPSRSPGLSPSSPSPEFLGLRS-------IS 462
LP P S+ + S + +PG PSP G ++ S
Sbjct: 954 PGAPLPWPPATGPGSADGLCTIYETEGPESATPAPGALDPGPSPGTSGGKAAAGAGAGAS 1013
Query: 463 TPSPESLRYALMP 475
+ SP+ R +P
Sbjct: 1014 SRSPKQARLGELP 1026
>gi|112734870 hypothetical protein LOC57648 [Homo sapiens]
Length = 1094
Score = 58.9 bits (141), Expect = 1e-08
Identities = 120/551 (21%), Positives = 177/551 (32%), Gaps = 79/551 (14%)
Query: 23 NNETALASGDAC---GTGNQDPAASVTTVSSQASPSGGAALSSSTAGSSAAAATSAAIFI 79
+++T ++ G G P +S + S P GG+ S + GS+A A+ + +I
Sbjct: 421 SSDTIVSDGSTLSSKGGSEGQPESSTASNSVVPPPQGGSGRGSPSGGSTAEASDTLSIRS 480
Query: 80 TDEASGLPIIAAVLTERHSDRQDCRSPHEVFGCVVPEG---------------------- 117
+ + SG + L + S H+ G VP+G
Sbjct: 481 SGQLSGRSVSLRKLKRPPPPPRRTHSLHQ-RGLAVPDGPLGLPPKPERKQQPQLPRPPTT 539
Query: 118 GSQAAVGPQKATGHADEHLAQTKSPGNSRRRKQPCRNQAAPAQKPPGR----RLFPEPL- 172
G G + SPG SRR + +P+ + L P+ L
Sbjct: 540 GGSEGAGAAPCPPNPANSWVPGLSPGGSRRPPRSPERTLSPSSGYSSQSGTPTLPPKGLA 599
Query: 173 -PPSSPG-------FRPSSYPCSGASTSSQATQPGPALLSHASEARPATRSRITLVASAL 224
PP+SPG R +S GAS SS T +L S +S+ P+ RS ++
Sbjct: 600 GPPASPGKAQPPKPERVTSLRSPGASVSSSLT----SLCSSSSDPAPSDRSGPQILTPLG 655
Query: 225 RRRASGPGPVIRGCTAQPGPAFPHRATHLDPARLSPESAPGPARRGRASVPGPARRGCDS 284
R P P + P P+ P PA +P PGP AS P
Sbjct: 656 DRFVIPPHPKV-PAPFSPPPSKPRSPNPAAPALAAPAVVPGPVSTTDASPQSPPTPQTTL 714
Query: 285 AP---GPARRGRDSAPVSAPRGRDSAPGSARRGRDSAPGPALRVRTARSDAGHRSTSTTP 341
P P S P S P P ++ P+ TA + P
Sbjct: 715 TPLQESPVISKDQSPPPSPPPSYHPPPPPTKKPEVVVEAPSAS-ETAEEPLQDPNWPPPP 773
Query: 342 GTGLRSRSTQQRSALLSRRSLSGSADENPSCGTGSERL----AFQSRS---------GSP 388
+ + A P+ +GS L A S S GSP
Sbjct: 774 PPAPEEQDLSMADFPPPEEAFFSVASPEPAGPSGSPELVSSPAASSSSATALQIQPPGSP 833
Query: 389 D----PEVPSRASPPVWHAVRMRASSP-------SPP-----GRFFLPIPQQWDESSSSS 432
D P P+ AS H ++ P PP P Q S
Sbjct: 834 DPPPAPPAPAPASSAPGHVAKLPQKEPVGCSKGGGPPREDVGAPLVTPSLLQMVRLRSVG 893
Query: 433 YASNSSSPSRSPGLSPSSPSPEFLGLRSISTPSPESLRYALMPEFYALSPVPPEEQAEIE 492
+ +P+ P +P P L R+ P+P S +A + A S E + +
Sbjct: 894 APGGAPTPALGPS-APQKPLRRALSGRASPVPAPSSGLHAAV-RLKACSLAASEGLSSAQ 951
Query: 493 STAHPATPPEP 503
P P P
Sbjct: 952 PNGPPEAEPRP 962
Score = 31.2 bits (69), Expect = 2.3
Identities = 65/249 (26%), Positives = 86/249 (34%), Gaps = 36/249 (14%)
Query: 52 ASPSGGAALSSSTAGSSAAAATSAAIFITDEASGLPIIAAVLTERHSDRQDCRSPH-EVF 110
A PSG L SS A SS++A T+ I P A + + P E
Sbjct: 803 AGPSGSPELVSSPAASSSSA-TALQIQPPGSPDPPPAPPAPAPASSAPGHVAKLPQKEPV 861
Query: 111 GCVVPEGGSQAAVGPQKATGHADEHLAQTKSPGNSRRRKQPCRNQAAPAQKPPGR----R 166
GC G + VG T + + + +S G P +AP QKP R R
Sbjct: 862 GCSKGGGPPREDVGAPLVTPSLLQ-MVRLRSVGAPGGAPTPALGPSAP-QKPLRRALSGR 919
Query: 167 LFPEPLPPSSPGFRPSSYPCS-GASTSSQATQP-GPALLSHASEARPATRSRITLVASAL 224
P P P S CS AS + QP GP PA S + + S
Sbjct: 920 ASPVPAPSSGLHAAVRLKACSLAASEGLSSAQPNGPPEAEPRPPQSPA--STASFIFSKG 977
Query: 225 RRRASGPGPV---------------IRGCTAQPGPAFPHRATHLDPARLSPESAPGPARR 269
R+ PV +R + Q P P + SP++ P AR+
Sbjct: 978 SRKLQLERPVSPETQADLQRNLVAELRSISEQRPPQAPKK---------SPKAPPPVARK 1028
Query: 270 GRASVPGPA 278
VP PA
Sbjct: 1029 PSVGVPPPA 1037
>gi|239752594 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 673
Score = 57.0 bits (136), Expect = 4e-08
Identities = 121/488 (24%), Positives = 169/488 (34%), Gaps = 78/488 (15%)
Query: 40 DPAASVTTVSSQASPSGGAALSSSTAG---SSAAAATSAAIFITDEASGLP---IIAAVL 93
D AS+T S+ASP+G +S T +S + S A+ I P + L
Sbjct: 206 DSTASITRTLSRASPTGTPPRASPTGSPPRASLSMMPSTALLIRTPPRASPTGMLSRTSL 265
Query: 94 TERHSDRQDCRSPHEVFGCVVPEGGSQAAVGPQKATGHADEHLAQTKSPGNSRRRKQPCR 153
T+ S R+P S+A++ +T L + G R
Sbjct: 266 TKMDSTASITRTPSRPSTASPTGTPSRASLSMTPSTASLMRMLPRASPTGMLSRTSLTKM 325
Query: 154 NQAAPAQKPPGRRLFPEPLPPSSPGFRPSSYPCSGASTSSQATQPGPALLSHASEARPAT 213
+ A + P R +SP +PS+ S T S+A+ G P+T
Sbjct: 326 DSTASISRTPPRASITRTPSRASPTGKPST--ASPTGTPSRASPTG----------SPST 373
Query: 214 RSRITLVASALRRRASGPGPVIRGCTAQPGPAFPHRATHLDPARLSPESAPGPA----RR 269
S + L AS G P R SP P A +
Sbjct: 374 AS-----LTGLSSTASPTG---------------------TPPRASPTGTPSTASLTRKP 407
Query: 270 GRASVPGPARR----GCDSAPGPARRGRDSAPVSAPRGRDSAPGSARR----GRDSAPGP 321
RAS G R DS P R ++P P R S G+ R G S P
Sbjct: 408 PRASPTGMLSRTSITKMDSTASPTRTPPRASPTGTP-PRASPTGTPSRASPTGTQSTASP 466
Query: 322 ALRVRTARSDAGHRSTSTTPGTGLRSRSTQQRS-ALLSRRSLSGSADENPSCGTGSERLA 380
TA S G ST++ G+ R+ T+ S A L++ + S PS + + +
Sbjct: 467 TGSPSTA-SPTGSPSTASPTGSPSRASLTRTPSRASLTKMESTASITRTPSRASPTWTPS 525
Query: 381 FQSRSGSPDPEV----PSRASPPVWHAVRMRASSPSPPGRFFLPIPQQWD-ESSSSSYAS 435
S +GSP + PSRA+ RAS P R L P + + S+
Sbjct: 526 TASPTGSPSTALAMGSPSRAA---LTRTPSRASLTRTPSRASLTTPSRASLTRTPSTVLL 582
Query: 436 NSSSPSRSPGLSPSSPSPEFLGLRSISTPSPESLRYALMPEFYALSPVPPE-EQAEIEST 494
PS SP PS SP T P S M +++ PP E
Sbjct: 583 TRMPPSASPTGMPSRTSP---------TGMPSSALLTKMDSTASITRTPPRASPTETPPR 633
Query: 495 AHP-ATPP 501
A P TPP
Sbjct: 634 ASPTGTPP 641
Score = 56.6 bits (135), Expect = 5e-08
Identities = 98/405 (24%), Positives = 141/405 (34%), Gaps = 59/405 (14%)
Query: 21 GLNNETALASGDACGT-GNQDPAASVTTVSSQASPSGGAALSSSTAGSSAAAATSAAIFI 79
G+ + T+L D+ + P AS+T S+ASP+G + +S T S A+ T
Sbjct: 315 GMLSRTSLTKMDSTASISRTPPRASITRTPSRASPTGKPSTASPTGTPSRASPT------ 368
Query: 80 TDEASGLPIIAAVLTERHSDRQDCRSPHEVFGCVVPEGGSQAAVGPQKATGHADEHLAQT 139
G P A+ LT S +P P S P+ + + T
Sbjct: 369 -----GSPSTAS-LTGLSSTASPTGTPPRASPTGTPSTASLTRKPPRASPTGMLSRTSIT 422
Query: 140 KSPGNSRRRKQPCRNQAAPAQKPPGRRLFPEPLPPSSPGFRPSSYPCSGASTSSQATQPG 199
K + + P R A+P PP P S G + ++ P ST+S P
Sbjct: 423 KMDSTASPTRTPPR--ASPTGTPPRASPTGTPSRASPTGTQSTASPTGSPSTASPTGSPS 480
Query: 200 PA----LLSHASEARPATRSRITLVASALRRRASGPGPVIRGCTAQPGPAFPHRATHLDP 255
A S AS R +R+ +T + S T P A P P
Sbjct: 481 TASPTGSPSRASLTRTPSRASLTKMEST------------ASITRTPSRASP----TWTP 524
Query: 256 ARLSPESAPGPARRGRASVPGPARRGCDSAPGPARRGRDSAPVSAPRGRDSAPGSARRGR 315
+ SP +P A ++ P+R P A R + R S +R
Sbjct: 525 STASPTGSPSTA----LAMGSPSRAALTRTPSRASLTRTPS-------RASLTTPSRASL 573
Query: 316 DSAPGPALRVRTARSDAGHRSTSTTPGTGLRSRSTQQRSALLSRRSLSGSADENPSCGTG 375
P L R S + S T TG+ S SALL++ + S P +
Sbjct: 574 TRTPSTVLLTRMPPSASPTGMPSRTSPTGMPS------SALLTKMDSTASITRTPPRASP 627
Query: 376 SERLAFQSRSGSP----DPEVPSRASPPVWHAVRMRASSPSPPGR 416
+E S +G+P P RASP RAS P R
Sbjct: 628 TETPPRASPTGTPPRASPTGTPPRASPT---GTPPRASPTGTPSR 669
Score = 51.6 bits (122), Expect = 2e-06
Identities = 119/515 (23%), Positives = 175/515 (33%), Gaps = 57/515 (11%)
Query: 43 ASVTTVSSQASPSGGAALSSSTAGSSAAAATS----AAIFITDEASGLPIIA--AVLTER 96
AS+T S+AS +G + +S S A+ T A++ T + L + A LT
Sbjct: 20 ASLTGTPSRASLTGTPSTASLMGTPSRASLTGTPPRASLKGTTSMASLMVSPSRASLTRM 79
Query: 97 HSDRQDCRSPHEVFGCVVPEGGSQAAVGPQKATGHADEHLAQTKSPGNSRRRKQPCR--- 153
S R+P +P S+ P+ + + T+SP + P R
Sbjct: 80 QSSSLLTRTPSMASLKRMPPRASRTRTLPRASLMRRPSTASLTRSPSRASLTTTPSRASL 139
Query: 154 -------------NQAAPAQKPPGRRLFPEPLPPSSPGFRPSSYPCSGASTSSQATQPGP 200
++A+ + PP L P S P + P S +S P
Sbjct: 140 SMTPSTAAALTMPSRASLTRTPPRASLTMTPSTASLTRTPPRASPTGMPSRTSPTGMPST 199
Query: 201 ALLSHASEARPATRSRITLVASALRRRASGPG-PVIRGCTAQPGPAF----PHRA----- 250
A L+ TR+ + RAS G P + P A P RA
Sbjct: 200 ASLTKMDSTASITRTLSRASPTGTPPRASPTGSPPRASLSMMPSTALLIRTPPRASPTGM 259
Query: 251 ---THLDPARLSPESAPGPARRGRASVPG-PARRGCDSAPGPARRGRDSAPVSAPRGRDS 306
T L + P+R AS G P+R P A R P ++P G S
Sbjct: 260 LSRTSLTKMDSTASITRTPSRPSTASPTGTPSRASLSMTPSTASLMR-MLPRASPTGMLS 318
Query: 307 ------APGSARRGRDSAPGPALRVRTARSDAGHRSTSTTPGTGLR-----SRSTQQRSA 355
+A R R + S G ST++ GT R S ST +
Sbjct: 319 RTSLTKMDSTASISRTPPRASITRTPSRASPTGKPSTASPTGTPSRASPTGSPSTASLTG 378
Query: 356 LLSRRSLSGSADENPSCGTGSERLAFQSRSGSPDPEVPSRASPPVWHAVRMRASSP---- 411
L S S +G+ GT S + + + SR S + +P
Sbjct: 379 LSSTASPTGTPPRASPTGTPSTASLTRKPPRASPTGMLSRTSITKMDSTASPTRTPPRAS 438
Query: 412 ---SPPGRFFLPIPQQWDESSSSSYASNSSSPS-RSPGLSPSSPSPEFLGLRSISTPSPE 467
+PP P + + + S AS + SPS SP SPS+ SP R+ T +P
Sbjct: 439 PTGTPPRASPTGTPSRASPTGTQSTASPTGSPSTASPTGSPSTASPTGSPSRASLTRTPS 498
Query: 468 SLRYALMPEFYALSPVPPEEQAE-IESTAHPATPP 501
M +++ P STA P P
Sbjct: 499 RASLTKMESTASITRTPSRASPTWTPSTASPTGSP 533
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 56.6 bits (135), Expect = 5e-08
Identities = 85/335 (25%), Positives = 114/335 (34%), Gaps = 32/335 (9%)
Query: 115 PEGGSQAAVGPQKATGHADEHLAQTKSPGNSRRRKQPCRNQAAPAQKPPGRRLFPE---- 170
P G+ + P + T P R Q P PP + L P+
Sbjct: 1140 PPPGAPPSPAPARFTARGGRVFTPRGVPSRRGRGGGRPPPQVCPGWSPPAKSLAPKKPPT 1199
Query: 171 -PLPPSSPGFRPSSYPCSGASTSSQATQPGPALLSHASEARPATRSRITLVASALRRRAS 229
PLPPS + P S ++ G + + RP R R +
Sbjct: 1200 GPLPPSKEPLKEKLIP-GPLSPVARGGSNGGSNVGMEDGERPRRRRH-------GRAQQQ 1251
Query: 230 GPGPVIRGCTAQPGPAFPHRATHLDPARLSPESAPGPARRGRASVPGPA-RRGCDSAPGP 288
P R + A R + P+ P SAPGP PA RR +P
Sbjct: 1252 DKPPRFRRLKQERENA--ARGSEGKPSLTLPASAPGPEEALTTVTVAPAPRRAAAKSPDL 1309
Query: 289 ARRGRDSAPVSAPRGRDSAP-GSARRGRDSAPGPALRVRTARSDAGHRSTSTTPGTGLRS 347
+ + D A +S+ S RRG AP P L A G PG S
Sbjct: 1310 SNQNSDQANEEWETASESSDFTSERRGDKEAPPPVLLTPKAVGTPGGGGGGAVPGISAMS 1369
Query: 348 R-STQQRSALLSRRSLS----GSADENPSCGTGSERLAFQSRS----GSPDPEV-PSRAS 397
R QR+ LS+RS S G +N G G + + S S G P P R
Sbjct: 1370 RGDLSQRAKDLSKRSFSSQRPGMERQNRRPGPGGKAGSSGSSSGGGGGGPGGRTGPGRGD 1429
Query: 398 PPVWHAVRMRASSPS--PPGRFFLPIPQQWDESSS 430
W + + R+ P PPG LP+P SS+
Sbjct: 1430 KRSWPSPKNRSRPPEERPPG---LPLPPPPPSSSA 1461
Score = 55.8 bits (133), Expect = 9e-08
Identities = 98/371 (26%), Positives = 126/371 (33%), Gaps = 57/371 (15%)
Query: 117 GGSQAAVGPQKATGHADEHLAQTKSPGNSRRRKQPCRNQAAPAQKPPGRRLFPEPLPPSS 176
GG + G G G+ R P P ++PPG L P P P SS
Sbjct: 1402 GGKAGSSGSSSGGGGGGPGGRTGPGRGDKRSWPSPKNRSRPPEERPPGLPL-PPPPPSSS 1460
Query: 177 PGFR--------PSSYPCSGASTSSQ---ATQPG------PAL--LSHASEARPATRSRI 217
FR P+ + A SS+ T PG P L RP TR
Sbjct: 1461 AVFRLDQVIHSNPAGIQQALAQLSSRQGSVTAPGGHPRHKPGLPQAPQGPSPRPPTRYEP 1520
Query: 218 TLVASALRR--RASGPGPVIRGCTAQPGPA-----FPHRATHLDPAR---LSPESAPGPA 267
V S L PGP++RG P + FP + P + L ES P P
Sbjct: 1521 QRVNSGLSSDPHFEEPGPMVRGVGGTPRDSAGVSPFPPKRRERPPRKPELLQEESLPPPH 1580
Query: 268 RRG-RASVPGPARRGCDSAPGPARRGRDSAPVSAPR---GRDSAPGSARRGRDSAPGPAL 323
G S P PGP RD+ + R S + R S+ P +
Sbjct: 1581 SSGFLGSKP--------EGPGPQAESRDTGTEALTPHIWNRLHTATSRKSYRPSSMEPWM 1632
Query: 324 RVRTARSD-AGHRSTSTTPGTGLRSRSTQQRSALLSRRS-----LSGSADENPSCGTGSE 377
+ D AG + + G L S +Q S S+RS L G+A+ P GS
Sbjct: 1633 EPLSPFEDVAGTEMSQSDSGVDL-SGDSQVSSGPCSQRSSPDGGLKGAAEGPPKRPGGSS 1691
Query: 378 RLAFQSRSGSPDPEVPSRASPPVWH---AVRMRASSPSPPGRFFLPIPQQWDESSSSSYA 434
L G P E P R PP H + P PPG PI + + +
Sbjct: 1692 PLNAVPCEGPPGSE-PPRRPPPAPHDGDRKELPREQPLPPG----PIGTERSQRTDRGTE 1746
Query: 435 SNSSSPSRSPG 445
PS PG
Sbjct: 1747 PGPIRPSHRPG 1757
Score = 42.4 bits (98), Expect = 0.001
Identities = 94/396 (23%), Positives = 119/396 (30%), Gaps = 69/396 (17%)
Query: 138 QTKSPGNSRRRKQPCRNQAAPAQKPPGRRLFPEPLPPSSPGFRPSSYPCSGASTSSQATQ 197
Q P RR KQ N A ++ P L P S+PG + + A +A
Sbjct: 1250 QQDKPPRFRRLKQERENAARGSEGKPSLTL-----PASAPGPEEALTTVTVAPAPRRAAA 1304
Query: 198 PGPALLSH-----------ASEARPATRSR---------ITLVASALRRRASGPGPVIRG 237
P L + ASE+ T R + L A+ G G + G
Sbjct: 1305 KSPDLSNQNSDQANEEWETASESSDFTSERRGDKEAPPPVLLTPKAVGTPGGGGGGAVPG 1364
Query: 238 CTAQPGPAFPHRATHLDPARLSPESA--------PGPARRGRASVPGPARRGCDSAPG-- 287
+A RA L S + PGP G+A G + G PG
Sbjct: 1365 ISAMSRGDLSQRAKDLSKRSFSSQRPGMERQNRRPGPG--GKAGSSGSSSGGGGGGPGGR 1422
Query: 288 --PARRGRDSAPVSAPRGRDSAPGSARRGRDSAPGPALRVRTARSDAGHRSTSTTPGTGL 345
P R + S P +P+ R P G P P R D S
Sbjct: 1423 TGPGRGDKRSWP--SPKNRSRPPEERPPGLPLPPPPPSSSAVFRLDQVIHSNPA------ 1474
Query: 346 RSRSTQQRSALLSRRSLSGSADENPSCGTGSERLAFQSRSGSPDPEVPSRASPPVWHAVR 405
QQ A LS R S +A G + P P P+R P R
Sbjct: 1475 ---GIQQALAQLSSRQGSVTAPG----GHPRHKPGLPQAPQGPSPRPPTRYEPQ-----R 1522
Query: 406 MRASSPSPPGRFFLPIPQQWDESSSSSYASNSSSPSRSPGLSPSSPSPEFLGLRSISTPS 465
+ + S P F P P +P S G+SP P R
Sbjct: 1523 VNSGLSSDP-HFEEPGPM---------VRGVGGTPRDSAGVSPFPPKRRERPPRKPELLQ 1572
Query: 466 PESLRYALMPEFYALSPVPPEEQAEIESTAHPATPP 501
ESL F P P QAE T A P
Sbjct: 1573 EESLPPPHSSGFLGSKPEGPGPQAESRDTGTEALTP 1608
Score = 34.3 bits (77), Expect = 0.27
Identities = 68/280 (24%), Positives = 89/280 (31%), Gaps = 60/280 (21%)
Query: 140 KSPGNSRRRKQPCRNQAAPAQKPPGRRLFPEPLPPSSPGFRPSSYPCSGASTSSQATQPG 199
+ PG P ++ A Q PP ++ P+ G P G + Q P
Sbjct: 857 EEPGPRPLPWPPGSDEVAKIQTPPPKKEPPKEETAQLTGPEAGRKPARGVGSGGQG--PP 914
Query: 200 PALLSHASEARPATRSRITLVASALRRRASGPGPVIRGCTAQPGPAFPHRATHLDPARLS 259
P +E R R PG RG + A P RA
Sbjct: 915 PPRRESRTETRWGPR----------------PGSSRRGIPPEEPGAPPRRA--------G 950
Query: 260 PESAPGPARRGRASVPGPARRGCDSAPGPAR-------RGRDSAPVSAPRGRDSAPGSAR 312
P P P + P P +G D P P + +G+ P P + +P
Sbjct: 951 PIKKPPPPTKVEELPPKPLEQG-DETPKPPKPDPLKITKGKLGGPKETPPNGNLSPAPRL 1009
Query: 313 R--------GRDSAPGPALRVRTARSDAGHRSTSTTPGTGLRSRSTQQRSALLSRRSLSG 364
R G S G AR G R T G G RSR + S R G
Sbjct: 1010 RRDYSYERVGPTSCRGRGRGEYFARG-RGFRGTYGGRGRGARSREFR------SYREFRG 1062
Query: 365 SADENPSCGTGSE--------RLAFQSRS-GSPDPEVPSR 395
D+ GTG R A ++RS GS E+P R
Sbjct: 1063 --DDGRGGGTGGPNHPPAPRGRTASETRSEGSEYEEIPKR 1100
Score = 32.7 bits (73), Expect = 0.79
Identities = 58/202 (28%), Positives = 72/202 (35%), Gaps = 41/202 (20%)
Query: 162 PPGRRLFPEPLPPSSPGFRPSSYP-----------CSGASTSSQATQPGPALLSHASEAR 210
P G L+P P SP F PS P S + S QPG
Sbjct: 1916 PAGGVLYPPPSFLYSPAFCPSPLPDTSLLQVRQDLPSPSDFYSTPLQPG-GQSGFLPSGA 1974
Query: 211 PATRSRITLVASALRRRASGPGPVIR--GCTAQPGPAFPHRA-----THLDPARLSPESA 263
PA + + +V S L PV+ P PA P + L P L+
Sbjct: 1975 PAQQMLLPMVDSQL--------PVVNFGSLPPAPPPAPPPLSLLPVGPALQPPSLAVRPP 2026
Query: 264 PGPARRGRASVPGPARRGCDSAPGPARRGR-DSAPVSAPRGRDSAPGSARRGRDSAPGPA 322
P PA R +P PAR P PA GR + PV +D S+ G PG +
Sbjct: 2027 PAPATR---VLPSPAR------PFPASLGRAELHPVELKPFQDYQKLSSNLG---GPGSS 2074
Query: 323 LRVRTARSDAGHRS-TSTTPGT 343
T RS +G S TP T
Sbjct: 2075 RTPPTGRSFSGLNSRLKATPST 2096
Score = 29.3 bits (64), Expect = 8.7
Identities = 53/205 (25%), Positives = 66/205 (32%), Gaps = 30/205 (14%)
Query: 251 THLDPARLSPESAPGPARRGRASVP-GPARRGCDSAPGPARRGRDSAPVSAPRGRDSAPG 309
TH S + AP P VP P G +P PAR V PRG S
Sbjct: 1112 THESDLAPSDKEAPTPKEGTLTQVPLAPPPPGAPPSPAPARFTARGGRVFTPRGVPS--- 1168
Query: 310 SARRGRDSAPGPALRVRTARSDAGHRSTSTTPGTGLRSRSTQQRSALLSRRSLSGSADEN 369
RRGR P +V S P TG S + L LS A
Sbjct: 1169 --RRGRGGGRPPP-QVCPGWSPPAKSLAPKKPPTGPLPPSKEPLKEKLIPGPLSPVARGG 1225
Query: 370 PSCGTGSERLAFQSRSGSPDPEVPSRASPPVWHAVRMRASSPSPPGRFFLPIPQQWDESS 429
+ G S G D E P R RA P RF ++ +
Sbjct: 1226 SNGG---------SNVGMEDGERPRRRR-------HGRAQQQDKPPRF-----RRLKQER 1264
Query: 430 SSSYASNSSSPSRSPGLSPSSPSPE 454
++ + PS + L S+P PE
Sbjct: 1265 ENAARGSEGKPSLT--LPASAPGPE 1287
>gi|82534351 microtubule-associated protein tau isoform 1 [Homo
sapiens]
Length = 758
Score = 56.2 bits (134), Expect = 7e-08
Identities = 106/435 (24%), Positives = 157/435 (36%), Gaps = 68/435 (15%)
Query: 113 VVPEGGSQAA-----VGPQKATG--HADEHLAQTKSPGNSRRRKQPCRNQAAPAQKPPGR 165
++PEG +A GP+ G HA E L + + G+ + P + A ++P +
Sbjct: 158 LLPEGPREATRQPSGTGPEDTEGGRHAPE-LLKHQLLGDLHQEGPPLKG-AGGKERPGSK 215
Query: 166 RLFPEPLPPSSPGFRPSSYPCSGASTSSQATQPGPALLSHASEARPATRSRITLVASALR 225
E P P S AS + P A S I L L
Sbjct: 216 EEVDEDRDVDESS--PQDSPPSKASPAQDGRPPQTAAREATSIPGFPAEGAIPLPVDFLS 273
Query: 226 R-----RASGP-GPVIRGCTAQPGPAFPHRATHLDPARLSPESAPGPARRGRASVPGPAR 279
+ AS P GP + Q P + P + E A GRA+ PG
Sbjct: 274 KVSTEIPASEPDGPSVGRAKGQDAPLEFTFHVEITP-NVQKEQAHSEEHLGRAAFPGAPG 332
Query: 280 RGCDSAPGPARRGRDSAPVSAPRGRDSAPGSARRGRDSAPGPALRVR-TARSDAGHRSTS 338
G + A GP+ G D+ P + P +A RG+ + P L+ R ++S G S
Sbjct: 333 EGPE-ARGPSL-GEDTKEADLPEPSEKQPAAAPRGKPVSRVPQLKARMVSKSKDGTGSDD 390
Query: 339 TTPGTGLRS--RSTQQRSALLSRRSLSGSAD------------ENPSC------------ 372
T RS ++ + R L + GS+D E PS
Sbjct: 391 KKAKTSTRSSAKTLKNRPCLSPKHPTPGSSDPLIQPSSPAVCPEPPSSPKHVSSVTSRTG 450
Query: 373 GTGSERLAFQSRSGSPDPEVPSRASPP----VWHAVRMRASSPSPPGRFFLPIPQQWDES 428
+G++ + + G P A+PP +A R+ A +P P P E
Sbjct: 451 SSGAKEMKLKGADGKTKIATPRGAAPPGQKGQANATRIPAKTPPAP-----KTPPSSGEP 505
Query: 429 SSSSYASNSSSPSRSPGLSPSSPSPEFLGLRSISTPSPESLRYALMPEFYALSPVPPEEQ 488
S S SSP SPG +P S S R+ S P+P + P+ A+ PP+
Sbjct: 506 PKSGDRSGYSSPG-SPG-TPGSRS------RTPSLPTPPTRE----PKKVAVVRTPPKSP 553
Query: 489 AEIESTAHPATPPEP 503
+ +S A P P
Sbjct: 554 SSAKSRLQTAPVPMP 568
Score = 40.0 bits (92), Expect = 0.005
Identities = 73/297 (24%), Positives = 118/297 (39%), Gaps = 35/297 (11%)
Query: 98 SDRQDCRSPHEVFGCVVPEGGSQAAVGPQKATGHADEHLAQTKSPGNSRRRK-QPCRNQA 156
S++Q +P VP+ ++ + TG +D+ A+T + +++ K +PC
Sbjct: 355 SEKQPAAAPRGKPVSRVPQLKARMVSKSKDGTG-SDDKKAKTSTRSSAKTLKNRPC---L 410
Query: 157 APAQKPPGRRLFPEPL-PPSSPGFRPSSYPCSGASTSSQATQPGPALLSHASEARPATRS 215
+P PG +PL PSSP P P S SS ++ G S A E +
Sbjct: 411 SPKHPTPGSS---DPLIQPSSPAVCPEP-PSSPKHVSSVTSRTGS---SGAKEMKLKGAD 463
Query: 216 RITLVASALRRRASGPGPVIRGCTAQPGPAFPHRA-THLDPARLSPESAPGPARRGRASV 274
T +A+ R A+ PG Q G A R PA +P S+ P + G S
Sbjct: 464 GKTKIATP--RGAAPPG--------QKGQANATRIPAKTPPAPKTPPSSGEPPKSGDRS- 512
Query: 275 PGPARRGCDSAPG--------PARRGRDSAPVSAPRGRDSAPGSARRGRDSAPGPALRVR 326
G + G PG P R+ V+ R +P SA+ +AP P ++
Sbjct: 513 -GYSSPGSPGTPGSRSRTPSLPTPPTREPKKVAVVRTPPKSPSSAKSRLQTAPVPMPDLK 571
Query: 327 TARSDAGHRSTSTTPGTGLRSRSTQQRSALLSRRSLSGSADENPSC-GTGSERLAFQ 382
+S G G + + ++ L + +S GS D G GS ++ ++
Sbjct: 572 NVKSKIGSTENLKHQPGGGKVQIINKKLDLSNVQSKCGSKDNIKHVPGGGSVQIVYK 628
>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
sapiens]
Length = 1560
Score = 53.9 bits (128), Expect = 3e-07
Identities = 95/379 (25%), Positives = 134/379 (35%), Gaps = 56/379 (14%)
Query: 150 QPCRNQAAPAQKPPGRRLFPEPLPPSSPGFRPSSYPCSGASTSSQATQPGPALLSHASEA 209
QP AA + P + P P P + S P QA QP A A+
Sbjct: 604 QPATPAAATGEAAPVLTVQPAPQAPPAV-----STPLPLGLQQPQAQQPPQAPTPQAAAP 658
Query: 210 RPATRSRITLVASALRRRASGPGPVIRGCTAQPGPAFPHRATHLDPARL--------SPE 261
AT + + AS P ++ G QP A P D ++ P
Sbjct: 659 PQATTPQPS------PGLASSPEKIVLG---QPPSATPTAILTQDSLQMFLPQERSQQPL 709
Query: 262 SAPGPARRGRASV----PGPARRGCDSAP-------GPARRGRDSAPVSAPRGRDSAPGS 310
SA GP ASV P PA+ + P GP ++P AP+ +AP
Sbjct: 710 SAEGPHLSVPASVIVSAPPPAQDPAPATPVAKGAGLGPQAPDSQASPAPAPQIPAAAP-- 767
Query: 311 ARRGRDSAPGPALRVRTARSDAGHRSTS------TTPGTGLRSRSTQQRSALLSRRSLSG 364
+G + P+L + D+ H + + P + +S S L
Sbjct: 768 -LKGPGPSSSPSLPHQAPLGDSPHLPSPHPTRPPSRPPSRPQSVSRPPSEPPLHPCPPPQ 826
Query: 365 SADENPSCGTGSERLAFQSRSGSPDPEVPSRASPPVWHAVRMRASSPSPPGRFFLPIPQQ 424
+ P +L + +P P P PP +R S P G P P
Sbjct: 827 APPTLPGIFVIQNQLGVPPPASNPAPTAPGPPQPP------LRPQSQPPEGPL-PPAPHL 879
Query: 425 WDESSSSSYASNSSSPSRSPGLSPSS---PSPEFLGLRSISTPSPESLRYALMPEFYALS 481
S+SS+ AS+S + SR P +PS P G TP P L+PE A
Sbjct: 880 PPSSTSSAVASSSETSSRLPAPTPSDFQLQFPPSQGPHKSPTPPP---TLHLVPE-PAAP 935
Query: 482 PVPPEEQAEIESTAHPATP 500
P PP ++ +T PA P
Sbjct: 936 PPPPPRTFQMVTTPFPALP 954
Score = 33.1 bits (74), Expect = 0.61
Identities = 79/341 (23%), Positives = 111/341 (32%), Gaps = 62/341 (18%)
Query: 39 QDPAASVTTVSSQAS-----PSGGAALSSSTAGSS----AAAATSAAIFITDEASGLPII 89
Q P+A+ T + +Q S P + S G A+ SA D A P+
Sbjct: 681 QPPSATPTAILTQDSLQMFLPQERSQQPLSAEGPHLSVPASVIVSAPPPAQDPAPATPVA 740
Query: 90 -AAVLTERHSDRQDCRSPHEVFGCVVP---EGGSQAAVGPQKATGHADEHLAQ---TKSP 142
A L + D Q +P P G S + P +A HL T+ P
Sbjct: 741 KGAGLGPQAPDSQASPAPAPQIPAAAPLKGPGPSSSPSLPHQAPLGDSPHLPSPHPTRPP 800
Query: 143 GNSRRRKQPCRNQAAPAQKPPGRRLFPEPLPPSSPGF----------RPSSYPCSGASTS 192
R Q + + P +PP P PP+ PG P+S P A
Sbjct: 801 SRPPSRPQ---SVSRPPSEPPLHPCPPPQAPPTLPGIFVIQNQLGVPPPASNPAPTAPGP 857
Query: 193 SQ-----ATQPGPALLSHASEARPATRSRITLVASALRRRASGPGPVIRGCTAQ-PGPAF 246
Q +QP L A P++ S + VAS+ + P P Q P
Sbjct: 858 PQPPLRPQSQPPEGPLPPAPHLPPSSTS--SAVASSSETSSRLPAPTPSDFQLQFPPSQG 915
Query: 247 PHRATHLDPA-RLSPESA----PGPARRGRASVPGPA--------------------RRG 281
PH++ P L PE A P P + P PA +
Sbjct: 916 PHKSPTPPPTLHLVPEPAAPPPPPPRTFQMVTTPFPALPQPKALLERFHQVPSGIILQNK 975
Query: 282 CDSAPGPARRGRDSAPVSAPRGRDSAPGSARRGRDSAPGPA 322
AP + P+++P G A G +AP A
Sbjct: 976 AGGAPAAPQTSTSLGPLTSPAASVLVSGQAPSGTPTAPSHA 1016
>gi|157785645 SPEG complex locus [Homo sapiens]
Length = 3267
Score = 53.9 bits (128), Expect = 3e-07
Identities = 90/373 (24%), Positives = 128/373 (34%), Gaps = 52/373 (13%)
Query: 149 KQPCRNQAAPAQKPPGRRLFPEPLPPSSPGFRPSSYPCSGASTSSQATQPGPALLSHASE 208
+ P ++Q AP+ PE LP P P +GAS + G + S
Sbjct: 1978 RAPSQDQEAPS---------PEALPS------PGQEPAAGASPRRGELRRGSSAESALPR 2022
Query: 209 ARPATRSRITLVASAL---RRRASGPGP--VIRGCTAQPGPAFPHRATHLDPARLSPESA 263
A P R A+++ +RR+ PG + RG + A +A R PE
Sbjct: 2023 AGPRELGRGLHKAASVELPQRRSPSPGATRLARGGLGEGEYAQRLQALRQRLLRGGPEDG 2082
Query: 264 PGPARRGRA--SVPGPARRGCDSAPGPARRGRDSAPVSAPRGRDSAPGSAR-----RGRD 316
RG S+ G AR + + P RG + ++ RGR
Sbjct: 2083 KVSGLRGPLLESLGGRARDPRMARAASSEAAPHHQPPLENRGLQKSSSFSQGEAEPRGRH 2142
Query: 317 SAPGPALRVRTARSDAGHRSTSTTPGTGLRSRSTQQRSALLSRRSLSGSADENPSCGTGS 376
G L + AR G R +P S + A S S PS T S
Sbjct: 2143 RRAGAPLEIPVAR--LGARRLQESPSLSALSEAQPSSPARPSAPKPSTPKSAEPSATTPS 2200
Query: 377 ERLAFQSRSGSPDPEVPSRASP--PVWHAVRMRASSPSPPGRFF----LPIPQQWDESSS 430
+ +P P P A P +RAS P+PP + LP+ S
Sbjct: 2201 D---------APQPPAPQPAQDKAPEPRPEPVRASKPAPPPQALQTLALPLTPYAQIIQS 2251
Query: 431 SSYASNSSSPSRSPGLSPSSPSPEFLGLRSISTPSPESLRYALMPEFYALSPVPPEEQAE 490
+ ++ PS+ P PS P P +++P P + PE S P A
Sbjct: 2252 LQLSGHAQGPSQGPAAPPSEPKPHAAVFARVASPPPGA------PEKRVPSAGGPPVLA- 2304
Query: 491 IESTAHPATPPEP 503
E P PP P
Sbjct: 2305 -EKARVPTVPPRP 2316
Score = 39.7 bits (91), Expect = 0.006
Identities = 91/359 (25%), Positives = 124/359 (34%), Gaps = 59/359 (16%)
Query: 142 PGNSRRRKQP-CRNQAA------PAQKPPGR-RLFPEPLP------PSSPGFRPSSYPCS 187
P + RR++P + Q A PAQ PP + L P P P P P +P++ P S
Sbjct: 275 PQSGLRREEPDLQPQLASEAPRRPAQPPPSKSALLPPPSPRVGKRSPPGPPAQPAATPTS 334
Query: 188 GASTSSQATQP----------------GPALLSHASEARPATRSRITLVASALRRRASGP 231
+ + P GP+L A E+RP T L ++ R A G
Sbjct: 335 PHRRTQEPVLPEDTTTEEKRGKKSKSSGPSLAGTA-ESRPQT----PLSEASGRLSALGR 389
Query: 232 GPVIRGCTAQPGPAFPHRATHLDPARLSPESAPGPARRGRASVPGPARRGCDSAPGPARR 291
P + + G + + R S E + P R V P R+ + R
Sbjct: 390 SPRL----VRAGSRILDKLQFFEERRRSLERSDSPPAPLRPWV--PLRKARSLEQPKSER 443
Query: 292 GRDSAPVSAPRGRDSAPGSA--RRGRDSAPGPALRVRT-ARSDAGHRSTSTTPGTGLRSR 348
G A + APGS RR +L RT RS A G R
Sbjct: 444 GAPWGTPGASQEELRAPGSVAERRRLFQQKAASLDERTRQRSPASDLELRFAQELGRIRR 503
Query: 349 STQQRSALLSRRSLSGSADENPSCGTGSERLAFQ-------SRSGSP---DPEVPSRASP 398
ST + + S SL + PS E F SR+ SP P PS A
Sbjct: 504 STSREELVRSHESLRATLQRAPSPREPGEPPLFSRPSTPKTSRAVSPAAAQPPSPSSAEK 563
Query: 399 PVWHAVRMRASSP---SPPGRFFLPIPQQWDESSSSSYASNSSSPSRSPGLSPSSPSPE 454
P R R+ P + PG P + S + RSP P++ PE
Sbjct: 564 PGDEPGRPRSRGPAGRTEPGEG--PQQEVRRRDQFPLTRSRAIQECRSPVPPPAADPPE 620
Score = 32.7 bits (73), Expect = 0.79
Identities = 27/92 (29%), Positives = 38/92 (41%), Gaps = 1/92 (1%)
Query: 412 SPPGRFFLPIPQQWDESSSSSYASNSSSPSRSPGLSPSSP-SPEFLGLRSISTPSPESLR 470
+PP R ++ +P++ S S +S+S S P PEF G R T P
Sbjct: 1899 APPERVWVTMPRRPPPSGGLSSSSDSEEEELEELPSVPRPLQPEFSGSRVSLTDIPTEDE 1958
Query: 471 YALMPEFYALSPVPPEEQAEIESTAHPATPPE 502
PE A +P+ +EQ S A PE
Sbjct: 1959 ALGTPETGAATPMDWQEQGRAPSQDQEAPSPE 1990
Score = 32.0 bits (71), Expect = 1.3
Identities = 58/221 (26%), Positives = 83/221 (37%), Gaps = 38/221 (17%)
Query: 261 ESAPGPARRGRASVPGPARRGCDSAPGPARRGRDSAPVSAPRGRDSA-PGSARRGRDSAP 319
+ +P + A PAR SAP P+ SA SA D+ P + + +D AP
Sbjct: 2162 QESPSLSALSEAQPSSPAR---PSAPKPSTP--KSAEPSATTPSDAPQPPAPQPAQDKAP 2216
Query: 320 GPALRVRTARSDAGHRSTSTTPGTGLRSRSTQQR--SALLSRRSLSGSADENPSCGTGSE 377
P R + S P L++ + + ++ LSG A + PS G +
Sbjct: 2217 EP-------RPEPVRASKPAPPPQALQTLALPLTPYAQIIQSLQLSGHA-QGPSQGPAAP 2268
Query: 378 ------RLAFQSRSGSPDP-----EVPSRASPPVWHAVRMRASSPSPPGRFFLPIPQQWD 426
A +R SP P VPS PPV + +A P+ +P +
Sbjct: 2269 PSEPKPHAAVFARVASPPPGAPEKRVPSAGGPPV---LAEKARVPT--------VPPRPG 2317
Query: 427 ESSSSSYASNSSSPSRSPGLSPSSPSPEFLGLRSISTPSPE 467
S SSS + S S SP LGLR +S E
Sbjct: 2318 SSLSSSIENLESEAVFEAKFKRSRESPLSLGLRLLSRSRSE 2358
Score = 30.0 bits (66), Expect = 5.1
Identities = 85/390 (21%), Positives = 130/390 (33%), Gaps = 41/390 (10%)
Query: 125 PQKATGHADEHLAQTKSPGNSRRRKQPCRNQAAPAQKPPGRRLFPEPLPPS----SPGFR 180
P+ +T + E A T S QP +++A + P R P P P + +
Sbjct: 2184 PKPSTPKSAEPSATTPSDAPQPPAPQPAQDKAPEPRPEPVRASKPAPPPQALQTLALPLT 2243
Query: 181 PSSYPCSGASTSSQATQPGPALLSHASEARP--ATRSRITL--VASALRRRASGPGPVIR 236
P + S A P + SE +P A +R+ + +R S GP +
Sbjct: 2244 PYAQIIQSLQLSGHAQGPSQGPAAPPSEPKPHAAVFARVASPPPGAPEKRVPSAGGPPVL 2303
Query: 237 GCTAQPGPAFPHRATHLDPARLSPESAPGPARRGRASVPGPARRGC-------DSAPGPA 289
A+ P + L + + ES + + S P G GP
Sbjct: 2304 AEKARVPTVPPRPGSSLSSSIENLESEAVFEAKFKRSRESPLSLGLRLLSRSRSEERGPF 2363
Query: 290 RRGRDSAPVSAPRGRDSAPGSARRGRDSAPGPALRVRTARSDAG-HRSTSTTPGTGLRSR 348
R + + P + RR S LR A + G R S + LR
Sbjct: 2364 RGAEEEDGIYRPSPAGTPLELVRRPERSRSVQDLR---AVGEPGLVRRLSLSLSQRLRRT 2420
Query: 349 STQQRSALLSRRSLSGSADENPSCGTGSERLAFQSR---------------SGSPDPEVP 393
QR R G + E S GS LA + R S D
Sbjct: 2421 PPAQRHPAWEARGGDGESSEGGSSARGSPVLAMRRRLSFTLERLSSRLQRSGSSEDSGGA 2480
Query: 394 SRASPPVWHAVRMRASSPSPPGRFFLPIPQQWDESSSSSYASNS-------SSPSRSPGL 446
S S P++ +R S R LP Q ++ +++ ++ S +S S +PG
Sbjct: 2481 SGRSTPLFGRLRRATSEGESLRRLGLPHNQLAAQAGATTPSAESLGSEASATSGSSAPGE 2540
Query: 447 SPSSPSPEFLGLRSISTPSPESLRYALMPE 476
S S F R SP +L ++ E
Sbjct: 2541 SRSRLRWGFSRPRKDKGLSPPNLSASVQEE 2570
Score = 30.0 bits (66), Expect = 5.1
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 438 SSPSRSPGLSPSSPSPEFLGLRSISTPSPESLRYALMPEFYALSPVPPEEQAEIESTAHP 497
S S +P L+P++P+P + + S P+P S + + PP +++ A P
Sbjct: 2799 SPTSLAPPLAPAAPTPPSVTVSPSSPPTPPSQALSSLKAVGPPPQTPPRRHRGLQA-ARP 2857
Query: 498 ATPPEP 503
A P P
Sbjct: 2858 AEPTLP 2863
>gi|178557734 microtubule-associated protein tau isoform 6 [Homo
sapiens]
Length = 776
Score = 53.5 bits (127), Expect = 4e-07
Identities = 102/440 (23%), Positives = 157/440 (35%), Gaps = 60/440 (13%)
Query: 113 VVPEGGSQAA-----VGPQKATG--HADEHLAQTKSPGNSRRRKQPCRNQAAPAQKPPGR 165
++PEG +A GP+ G HA E L + + G+ + P + A ++P +
Sbjct: 158 LLPEGPREATRQPSGTGPEDTEGGRHAPE-LLKHQLLGDLHQEGPPLKG-AGGKERPGSK 215
Query: 166 RLFPEPLPPSSPGFRPSSYPCSGASTSSQATQPGPALLSHASEARPATRSRITLVASALR 225
E P P S AS + P A S I L L
Sbjct: 216 EEVDEDRDVDESS--PQDSPPSKASPAQDGRPPQTAAREATSIPGFPAEGAIPLPVDFLS 273
Query: 226 R-----RASGP-GPVIRGCTAQPGPAFPHRATHLDPARLSPESAPGPARRGRASVPGPAR 279
+ AS P GP + Q P + P + E A GRA+ PG
Sbjct: 274 KVSTEIPASEPDGPSVGRAKGQDAPLEFTFHVEITP-NVQKEQAHSEEHLGRAAFPGAPG 332
Query: 280 RGCDSAPGPARRGRDSAPVSAPRGRDSAPGSARRGRDSAPGPALRVR-TARSDAGHRSTS 338
G + A GP+ G D+ P + P +A RG+ + P L+ R ++S G S
Sbjct: 333 EGPE-ARGPSL-GEDTKEADLPEPSEKQPAAAPRGKPVSRVPQLKARMVSKSKDGTGSDD 390
Query: 339 TTPGTGLRS--RSTQQRSALLSRRSLSGSAD------------ENPSC------------ 372
T RS ++ + R L + GS+D E PS
Sbjct: 391 KKAKTSTRSSAKTLKNRPCLSPKHPTPGSSDPLIQPSSPAVCPEPPSSPKHVSSVTSRTG 450
Query: 373 GTGSERLAFQSRSGSPDPEVPSRASPP----VWHAVRMRASSP----SPPGRFFLPIPQQ 424
+G++ + + G P A+PP +A R+ A +P +PP + ++
Sbjct: 451 SSGAKEMKLKGADGKTKIATPRGAAPPGQKGQANATRIPAKTPPAPKTPPSSATKQVQRR 510
Query: 425 WDESS-SSSYASNSSSPSRSPGLSPSSPSPEFLGLRSISTPSPESLRYALMPEFYALSPV 483
+ S S RS SP SP R+ S P+P + P+ A+
Sbjct: 511 PPPAGPRSERGEPPKSGDRSGYSSPGSPGTPGSRSRTPSLPTPPTRE----PKKVAVVRT 566
Query: 484 PPEEQAEIESTAHPATPPEP 503
PP+ + +S A P P
Sbjct: 567 PPKSPSSAKSRLQTAPVPMP 586
Score = 39.3 bits (90), Expect = 0.008
Identities = 66/299 (22%), Positives = 114/299 (38%), Gaps = 21/299 (7%)
Query: 98 SDRQDCRSPHEVFGCVVPEGGSQAAVGPQKATGHADEHLAQTKSPGNSRRRK-QPCRNQA 156
S++Q +P VP+ ++ + TG +D+ A+T + +++ K +PC +
Sbjct: 355 SEKQPAAAPRGKPVSRVPQLKARMVSKSKDGTG-SDDKKAKTSTRSSAKTLKNRPCLSPK 413
Query: 157 APAQKPPGRRLFPE-----PLPPSSPGFRPSSYPCSGASTSSQATQPGPALLSHASEARP 211
P + P P PPSSP S +G+S + + G + + R
Sbjct: 414 HPTPGSSDPLIQPSSPAVCPEPPSSPKHVSSVTSRTGSSGAKEMKLKGADGKTKIATPRG 473
Query: 212 ATRSRITLVASALRRRA-------SGPGPVIRGCTAQPGPAFPHRATHLDPARLSPESAP 264
A A+A R A + P + +P PA P R+ +P + S
Sbjct: 474 AAPPGQKGQANATRIPAKTPPAPKTPPSSATKQVQRRPPPAGP-RSERGEPPKSGDRS-- 530
Query: 265 GPARRGRASVPGPARRGCDSAPGPARRGRDSAPVSAPRGRDSAPGSARRGRDSAPGPALR 324
G + G PG R P R + A V P +P SA+ +AP P
Sbjct: 531 GYSSPGSPGTPGSRSRTPSLPTPPTREPKKVAVVRTP---PKSPSSAKSRLQTAPVPMPD 587
Query: 325 VRTARSDAGHRSTSTTPGTGLRSRSTQQRSALLSRRSLSGSADENPSC-GTGSERLAFQ 382
++ +S G G + + ++ L + +S GS D G GS ++ ++
Sbjct: 588 LKNVKSKIGSTENLKHQPGGGKVQIINKKLDLSNVQSKCGSKDNIKHVPGGGSVQIVYK 646
>gi|40353729 Ras and Rab interactor 3 [Homo sapiens]
Length = 985
Score = 53.5 bits (127), Expect = 4e-07
Identities = 90/365 (24%), Positives = 133/365 (36%), Gaps = 52/365 (14%)
Query: 154 NQAAPAQKPPGRRLFPEPLPPSSPGFRPSSYPCSGASTSSQATQPGPAL-LSHASEARPA 212
+ A P +PP PLPP+S P+S + P P L L S A+P
Sbjct: 244 SSALPTDQPPLGNCPARPLPPTSDATSPTS-----RWAPRRPPPPPPVLPLQPCSPAQPP 298
Query: 213 TRSRITLVASALRRRASGPGPVIRGCTAQPGPA-FPHRATHLDPARL-SPESAPGPARRG 270
+ A A S P P PGP P++ + RL P + GP R
Sbjct: 299 VLPALA-PAPACPLPTSPPVPAPHVTPHAPGPPDHPNQPPMMTCERLPCPTAGLGPLRE- 356
Query: 271 RASVPGPARRGCDSAPGPARRGRDSAPVSAPRGR--------DSAPGSARRGRDSAPGPA 322
A PG A P P + + P + PR R D +PG A G D P
Sbjct: 357 EAMKPGAASSPLQQVPAPPLPAKKNLPTAPPRRRVSERVSLEDQSPGMAAEG-DQLSLPP 415
Query: 323 LRVRTARSDAGHRSTSTTPGTGLRSRSTQQRSALLSRRSLSGSADENPSCGTGSERLAFQ 382
D ST T +++ S L +A + P +R++ Q
Sbjct: 416 QGTSDGPEDTPRESTEQGQDTEVKASDPH------SMPELPRTAKQPPVPPPRKKRISRQ 469
Query: 383 SRSGSPDPEVPSRASPPVWHAVRMRASSPSPPGRFFLPIPQQWDESSSSSYASNSSSPSR 442
S P P + A+ + +P PP + S +S A P++
Sbjct: 470 LASTLP---APLENAELCTQAMALETPTPGPPR----------EGQSPASQAGTQHPPAQ 516
Query: 443 SPGLSPSSPSPEFLG-LRSISTPSPESLRYALM---PEFYALSPVPPEEQAEIESTAHPA 498
+ S S SPEF G L S+S +SL ++M + Y+ S + E+E + P+
Sbjct: 517 ATAHSQS--SPEFKGSLASLS----DSLGVSVMATDQDSYSTS----STEEELEQFSSPS 566
Query: 499 TPPEP 503
+P
Sbjct: 567 VKKKP 571
>gi|42475970 synapse defective 1, Rho GTPase, homolog 1 [Homo
sapiens]
Length = 735
Score = 52.8 bits (125), Expect = 7e-07
Identities = 73/310 (23%), Positives = 105/310 (33%), Gaps = 52/310 (16%)
Query: 147 RRKQPCRNQAAPAQKPPGRRLFPEPLPPSSPGFRPSSYPCSGASTSSQATQPGPALLSHA 206
R+K + + PAQ+P EP PP P SS PA ++
Sbjct: 21 RKKSDAKERGHPAQRP-------EPSPPEPEPQAPEGSQAGAEGPSSPEASRSPARGAYL 73
Query: 207 SEARPATRSRITLVASALRRRASGPGPVIRGCTAQPGPAFPHRATHLDPARLSPESAPGP 266
P++R + A + GPG PG P +P PE P P
Sbjct: 74 QSLEPSSRRWVLGGAKPAEDTSLGPG--------VPGTGEPAGEIWYNPI---PEEDPRP 122
Query: 267 ARRGRASVPGPARRGCDSAPGPARRGRDSAPVSAPRGRDSAPGSARRGRDSAPGPALRVR 326
P P PGP +S + AP+G A + R +PGPA R+
Sbjct: 123 --------PAP------EPPGPQPGSAESEGL-APQGAAPASPPTKASRTKSPGPARRLS 167
Query: 327 TARS---DAGHRSTSTTPGTGLRSRSTQQRSALLSRRSLSGS-ADENPSCGTG---SERL 379
+ R + P G +++SR L S P+ G G S R
Sbjct: 168 IKMKKLPELRRRLSLRGPRAGRERERAAPAGSVISRYHLDSSVGGPGPAAGPGGTRSPRA 227
Query: 380 AFQSRSGSPD-PEVPSRASPPVWHAVRMRASSPSPPGRFFLPIPQQWDESSSSSYASNSS 438
+ S SP+ P P SP + + ++ +PP W S Y
Sbjct: 228 GYLSDGDSPERPAGP--PSPTSFRPYEVGPAARAPPAAL-------WGRLSLHLYGLGGL 278
Query: 439 SPSRSPGLSP 448
P +PG +P
Sbjct: 279 RP--APGATP 286
Score = 41.6 bits (96), Expect = 0.002
Identities = 67/245 (27%), Positives = 87/245 (35%), Gaps = 51/245 (20%)
Query: 115 PEGGSQAAVGP---QKATGHADEHLAQTKSP-------GNSRRRKQPCRNQAAPAQKPPG 164
PEG A GP + + A Q+ P G ++ + P P
Sbjct: 48 PEGSQAGAEGPSSPEASRSPARGAYLQSLEPSSRRWVLGGAKPAEDTSLGPGVPGTGEPA 107
Query: 165 RRLFPEPLP--------PSSPGFRPSS-----------YPCSGASTSSQATQPGPA-LLS 204
++ P+P P PG +P S P S + +S+ PGPA LS
Sbjct: 108 GEIWYNPIPEEDPRPPAPEPPGPQPGSAESEGLAPQGAAPASPPTKASRTKSPGPARRLS 167
Query: 205 HASEARPATRSRITL---VASALRRRASGPGPVIR-----------GCTAQPGPAFPHRA 250
+ P R R++L A R RA+ G VI G A PG RA
Sbjct: 168 IKMKKLPELRRRLSLRGPRAGRERERAAPAGSVISRYHLDSSVGGPGPAAGPGGTRSPRA 227
Query: 251 THLDPARLSPESAPGP--ARRGRASVPGPARRGCDSAPGPARRGRDSAPVSAPRGRDSAP 308
+L SPE GP R GPA R AP A GR S + G AP
Sbjct: 228 GYLSDGD-SPERPAGPPSPTSFRPYEVGPAAR----APPAALWGRLSLHLYGLGGLRPAP 282
Query: 309 GSARR 313
G+ R
Sbjct: 283 GATPR 287
>gi|239748777 PREDICTED: hypothetical protein [Homo sapiens]
Length = 350
Score = 52.4 bits (124), Expect = 1e-06
Identities = 68/233 (29%), Positives = 86/233 (36%), Gaps = 39/233 (16%)
Query: 118 GSQAAVGPQKATGHADEHLAQTKSPG----NSRRRKQPCRNQAAPAQKPPGRRLFPEPLP 173
GS+A P+ A+ A + PG S R R +AAPA P RL P L
Sbjct: 30 GSRAHPNPRSASSAAAAASSSFPPPGFIHPPSSRAAVHSRLRAAPAAAP---RLLPRVLA 86
Query: 174 PSSPGFRPSSYPCSGASTSSQATQPGPALLSHASEARPATRSRITLVASALRRRASGPGP 233
+ +GA S+ A +H EA T R RR GP P
Sbjct: 87 GAPAR--------TGALAGSRLRAAAAA--AHDQEAAAPTGRRW--------RRRPGPSP 128
Query: 234 VIRGCTAQPGPAFPHRATHLDPARLSPESAPGPARRGRASVPGPARRGCDSAPGPARRGR 293
++ + P +P P R P P R RA +R GC S+P PA R R
Sbjct: 129 PLQPRSRHPHTRYPRAVPEATPLR------PPPGTRPRAK----SRPGCRSSPFPA-RSR 177
Query: 294 DSAPVSAPRGRDSAPGSARRGRDSAPGPALRVRTARS--DAGHRSTSTTPGTG 344
PRG D P + R G PALR + S G R+ G G
Sbjct: 178 TPGEAGPPRG-DPRPRAPRPGDHPRRSPALRETPSLSPPSPGRRNGKRAAGKG 229
Score = 35.4 bits (80), Expect = 0.12
Identities = 66/271 (24%), Positives = 82/271 (30%), Gaps = 60/271 (22%)
Query: 186 CSGASTSSQATQPGPALLSHASEARPATRSRITLVASALRRRASGPGPVIRGCTAQPGPA 245
C +T A PG A S ARP + A R AS PG
Sbjct: 2 CREKATEEAAAPPGVA----ESPARPRVNEQWGSRAHPNPRSASSAAAAASSSFPPPGFI 57
Query: 246 FPHRATHLDPARLSPESAPGPARRGRASVPGPARRGCDSAPGPARRGRDSAPVSAPRGRD 305
P + +RL A P R PAR G + G R +A +A
Sbjct: 58 HPPSSRAAVHSRLRAAPAAAPRLLPRVLAGAPARTG--ALAGSRLR---AAAAAAHDQEA 112
Query: 306 SAPGSARRGRDSAPGPALRVR-----TARSDAGHRSTSTTPGTGLRSRSTQQRSALLSRR 360
+AP R R P P L+ R T A +T P G R R
Sbjct: 113 AAPTGRRWRRRPGPSPPLQPRSRHPHTRYPRAVPEATPLRPPPGTRPR------------ 160
Query: 361 SLSGSADENPSCGTGSERLAFQSRSGSPDPEVPSRASPPVWHAVRMRASSPSPPGRFFLP 420
A P C + F +RS +P P R P R RA P
Sbjct: 161 -----AKSRPGCRSS----PFPARSRTPGEAGPPRGDP------RPRAPRP--------- 196
Query: 421 IPQQWDESSSSSYASNSSSPSRSPGLSPSSP 451
+ S + +P LSP SP
Sbjct: 197 ----------GDHPRRSPALRETPSLSPPSP 217
>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 [Homo
sapiens]
Length = 2231
Score = 52.4 bits (124), Expect = 1e-06
Identities = 99/444 (22%), Positives = 155/444 (34%), Gaps = 45/444 (10%)
Query: 32 DACGTGNQDPAASVTTVSSQASPSGGAALSSSTAGSSAAAATSAAIFITDEASGLPIIAA 91
D G+ + P + T+SS S SG + + + + + A G P +
Sbjct: 609 DLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSP 668
Query: 92 VLTERHSDRQDCRSPHEVFGCVVPEG--GSQAAVGPQKATGHADEHLAQTKSPGNSRR-- 147
V + S++ RS G + P GSQ P + + H A ++SP R
Sbjct: 669 VGSPVGSNQS--RS-----GPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGF 721
Query: 148 ----RKQPCRNQAAPAQKPPGRRLFPEPLPPSSPGFRPSSYPCSGASTSSQATQPGPALL 203
++ P Q P Q P P P G S + Q +Q GP
Sbjct: 722 MAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQYGP--- 778
Query: 204 SHASEARPATRSRITLVASALRRRASGPGPVIRGCTAQ-----PGPAFPHRATHLD---P 255
+ +RP S + + SGPGP + G +A GP+ P A L
Sbjct: 779 -QGNYSRPPAYSGVPSASY------SGPGPGM-GISANNQMHGQGPSQPCGAVPLGRMPS 830
Query: 256 ARLSPESAPGPARRGRASVPGPARRGCDSAPGPARRGRDSAPVSAPRGRDSAPGSARRGR 315
A + PG S PG +++G P A +A +A SA+ +
Sbjct: 831 AGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQ 890
Query: 316 DSAPGPALRVRTARSDAGHRSTSTTPGTGLRSRSTQQRSALLSRRSLSGSADENPSCGTG 375
S PG A S + + + + +++ A S + S G
Sbjct: 891 GSFPGMNQSGLMA-SSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVGLADMMSPG 949
Query: 376 SERLAFQSRS-----GSPDPEVPSRASPPVWHAVRMRASSPSPPGRFFLPIPQQWDESSS 430
+L ++ G+P PE S+ S S P PG +P P +S
Sbjct: 950 ESKLPLPLKADGKEEGTPQPESKSKDSYS-----SQGISQPPTPGNLPVPSPMSPSSASI 1004
Query: 431 SSYASNSSSPSRSPGLSPSSPSPE 454
SS+ + S SPG + SP+
Sbjct: 1005 SSFHGDESDSISSPGWPKTPSSPK 1028
Score = 42.4 bits (98), Expect = 0.001
Identities = 117/488 (23%), Positives = 165/488 (33%), Gaps = 82/488 (16%)
Query: 56 GGAALSSSTAGSSAAAATSAAIFI-TDEASGLPIIAAVLTERHSDRQDCRSPHEVFGCVV 114
GGA + AG+ AAAA +AA G +A S RQ + G ++
Sbjct: 269 GGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQ------QGGGMMM 322
Query: 115 PEGGSQAAVGPQKATGHADEHLAQTKSPGNSRRRKQPCRNQAAPAQKPPGRRL---FPEP 171
GG AA + A G A + P NQ + P R +PE
Sbjct: 323 GPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEY 382
Query: 172 LPPSSPGFRP----SSYPCSGASTSSQATQPGPAL-------LSHASEARPATRSRITLV 220
PS+P P S +GA+ Q G L + AS A A + R
Sbjct: 383 SSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQR---- 438
Query: 221 ASALRRRASGPGPVIRGCTAQPGPAFPHRATHLDPARLSPESAP---GPARRGRASVPGP 277
S PGP + P + L +P S P P G PGP
Sbjct: 439 -SHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGP 497
Query: 278 ARR--GCDSAPGPARRGRDSAPVSAP--RGRDSAPGSARRGRDSAPG---------PALR 324
R G A G P G+ G ++G+ P +
Sbjct: 498 QRYPIGIQGRTPGAMAGMQYPQQQMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQ 557
Query: 325 VRTARSDAGHRSTSTTPGTGLRSRSTQQRS-ALLSRRSLSGSADENPSCGTGSERLAFQS 383
++S ++ G +RS + + L+ E PS +
Sbjct: 558 YLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPS--------SLPD 609
Query: 384 RSGSPDPEVPSRASPPVWHAVRMRASSPSPPGRFFLPIPQQWDESSSSSYASNSSSPSRS 443
SGS D ++P+ + AV S+ S + S+ A + SP S
Sbjct: 610 LSGSID-DLPTGTEATLSSAVSASGSTSS--------------QGDQSNPAQSPFSPHAS 654
Query: 444 PGLS--PSSPSPEFLGL-----RSISTP-SPESLRYALMPEFYALSPVPPEEQAEIESTA 495
P LS P PSP +G +S S P SP S+ + MP P PP Q+ ES++
Sbjct: 655 PHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMP------PQPPGSQS--ESSS 706
Query: 496 HPATPPEP 503
HPA P
Sbjct: 707 HPALSQSP 714
>gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo
sapiens]
Length = 384
Score = 52.0 bits (123), Expect = 1e-06
Identities = 60/199 (30%), Positives = 73/199 (36%), Gaps = 45/199 (22%)
Query: 154 NQAAPAQKPPGRRLFPEPLPPSSPGFRPSSYPCSGASTSSQATQPGPALLSHASEARPAT 213
++ PA +PP P S PG SG+ T+ A P P+ S RPA
Sbjct: 77 SRTRPAARPP------HPRTRSPPGR-------SGSGTTFSAVPPRPSQHQSGSRLRPA- 122
Query: 214 RSRITLVASALRRRASGPGPVIRGCTAQPGPAFPHRATHLDPARLSPESAPGPARRGRAS 273
A GP P A P PA P A P R + GP RG+ S
Sbjct: 123 --------------APGPRPGCSSARASPAPAAPQAAARTAPGR-AASGGSGPGSRGQGS 167
Query: 274 VPGPARRGCDSAPGPARRGRDSAPVSAPRGRDSAPGSARRGRDSAPGPALRVRTARSDAG 333
AR P+R G P++ R R + SAR R PG L+ R S G
Sbjct: 168 DQVGAR--------PSRAGGQPPPLTCRRCRAAPRRSARPFR--RPGLPLKSRPG-SGTG 216
Query: 334 HRSTST-----TPGTGLRS 347
RS T PGT S
Sbjct: 217 ARSCGTWGSGGGPGTAAAS 235
>gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo
sapiens]
Length = 384
Score = 52.0 bits (123), Expect = 1e-06
Identities = 60/199 (30%), Positives = 73/199 (36%), Gaps = 45/199 (22%)
Query: 154 NQAAPAQKPPGRRLFPEPLPPSSPGFRPSSYPCSGASTSSQATQPGPALLSHASEARPAT 213
++ PA +PP P S PG SG+ T+ A P P+ S RPA
Sbjct: 77 SRTRPAARPP------HPRTRSPPGR-------SGSGTTFSAVPPRPSQHQSGSRLRPA- 122
Query: 214 RSRITLVASALRRRASGPGPVIRGCTAQPGPAFPHRATHLDPARLSPESAPGPARRGRAS 273
A GP P A P PA P A P R + GP RG+ S
Sbjct: 123 --------------APGPRPGCSSARASPAPAAPQAAARTAPGR-AASGGSGPGSRGQGS 167
Query: 274 VPGPARRGCDSAPGPARRGRDSAPVSAPRGRDSAPGSARRGRDSAPGPALRVRTARSDAG 333
AR P+R G P++ R R + SAR R PG L+ R S G
Sbjct: 168 DQVGAR--------PSRAGGQPPPLTCRRCRAAPRRSARPFR--RPGLPLKSRPG-SGTG 216
Query: 334 HRSTST-----TPGTGLRS 347
RS T PGT S
Sbjct: 217 ARSCGTWGSGGGPGTAAAS 235
>gi|239508962 PREDICTED: hypothetical protein [Homo sapiens]
Length = 384
Score = 52.0 bits (123), Expect = 1e-06
Identities = 60/199 (30%), Positives = 73/199 (36%), Gaps = 45/199 (22%)
Query: 154 NQAAPAQKPPGRRLFPEPLPPSSPGFRPSSYPCSGASTSSQATQPGPALLSHASEARPAT 213
++ PA +PP P S PG SG+ T+ A P P+ S RPA
Sbjct: 77 SRTRPAARPP------HPRTRSPPGR-------SGSGTTFSAVPPRPSQHQSGSRLRPA- 122
Query: 214 RSRITLVASALRRRASGPGPVIRGCTAQPGPAFPHRATHLDPARLSPESAPGPARRGRAS 273
A GP P A P PA P A P R + GP RG+ S
Sbjct: 123 --------------APGPRPGCSSARASPAPAAPQAAARTAPGR-AASGGSGPGSRGQGS 167
Query: 274 VPGPARRGCDSAPGPARRGRDSAPVSAPRGRDSAPGSARRGRDSAPGPALRVRTARSDAG 333
AR P+R G P++ R R + SAR R PG L+ R S G
Sbjct: 168 DQVGAR--------PSRAGGQPPPLTCRRCRAAPRRSARPFR--RPGLPLKSRPG-SGTG 216
Query: 334 HRSTST-----TPGTGLRS 347
RS T PGT S
Sbjct: 217 ARSCGTWGSGGGPGTAAAS 235
>gi|149773456 hypothetical protein LOC643314 [Homo sapiens]
Length = 1427
Score = 51.6 bits (122), Expect = 2e-06
Identities = 96/442 (21%), Positives = 150/442 (33%), Gaps = 47/442 (10%)
Query: 68 SAAAATSAAIFITDEASGLPIIAAVLTERHSDRQDCRSPH-EVFGCVVP----EGGSQAA 122
S T+A ++ P +AA +T+ SP VP +G +
Sbjct: 915 SVPEGTAAVAAVSSPEETAPAVAAAITQEGMSAVAGFSPEWAALAITVPITEEDGTPEGP 974
Query: 123 VGPQKATGHADEHLAQTKSPGNSRRRKQPCRNQAAPAQKPPGRRLFPEPLPPSSPGF--- 179
V P +E P P + P P P+SP
Sbjct: 975 VTPATTVHAPEEPDTAAVRVSTPEEPASPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVP 1034
Query: 180 ---RPSSYPCSGASTSSQATQPGPALLSHASEARPA----TRSRITLVASALRRRASGPG 232
P+S P + T + T P A+ + PA T T A+A+
Sbjct: 1035 PPEEPTS-PAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTS 1093
Query: 233 PVIRGCTAQ----PGPAFPHRATHLDPARL--SPESAPGPARRGRASVPGPARRGCDSAP 286
P T + P A P PA +PE PA A+VP P +
Sbjct: 1094 PAAAVPTPEEPTSPAAAVPTPEEPASPAAAVPTPEEPASPA----AAVPTPEEPAFPAPA 1149
Query: 287 GPARRGRDSAPVSAPRGRDSAPGSARRGRDSAPGPALRVRTARSDAGHRSTSTTPGTGLR 346
P SA V+ P +SA +A + P PA + S A +T P +
Sbjct: 1150 VPTPEESASAAVAVPTPEESASPAA-----AVPTPA----ESASFAAVVATLEEPTSPAA 1200
Query: 347 SRSTQQRSALLSRRSLSGSADENPSCGTGSERLAFQSRSGSPDPEVPSRASPPVWHAVRM 406
S T S +A S T E + + +P+ A+ P
Sbjct: 1201 SVPTPAAMVATLEEFTSPAA----SVPTSEEPASLAAAVSNPEEPTSPAAAVPTLEEPTS 1256
Query: 407 RASSPSPPGRFFLP---IPQQWDESSSSSYASNSSSPSRSPGLSPSSPSPEFLGLRSIST 463
A++ P P +P + +S ++ SN P+ SP + + P+PE + + S
Sbjct: 1257 SAAAVLTPEELSSPAASVPTPEEPASPAAAVSNLEEPA-SP--AAAVPTPEVAAIPAASV 1313
Query: 464 PSPE--SLRYALMPEFYALSPV 483
P+PE ++ A +P +SP+
Sbjct: 1314 PTPEVPAIPAAAVPPMEEVSPI 1335
Score = 29.6 bits (65), Expect = 6.7
Identities = 60/253 (23%), Positives = 83/253 (32%), Gaps = 31/253 (12%)
Query: 41 PAASVTTVSSQASPSGGAALSSSTAGSSAAAAT-------SAAIFITDEASGLPIIAAVL 93
PAA+V T ASP+ A +AA T + A+ +E++ +
Sbjct: 1107 PAAAVPTPEEPASPAAAVPTPEEPASPAAAVPTPEEPAFPAPAVPTPEESASAAVAVPTP 1166
Query: 94 TERHSDRQDCRSPHE--VFGCVV---PEGGSQAAVGPQKATGHADEHLAQTKSPGNSRRR 148
E S +P E F VV E S AA P A A L + SP S
Sbjct: 1167 EESASPAAAVPTPAESASFAAVVATLEEPTSPAASVPTPAAMVAT--LEEFTSPAASVPT 1224
Query: 149 KQPCRNQAAPAQKP-----PGRRL--FPEPLPPSSPGFRPS--SYPCSGASTSSQATQPG 199
+ + AA P P + EP ++ P S P + T + P
Sbjct: 1225 SEEPASLAAAVSNPEEPTSPAAAVPTLEEPTSSAAAVLTPEELSSPAASVPTPEEPASPA 1284
Query: 200 PALLSHASEARPATRSRITLVASALRRRASGPG-PVIRGCTAQP-------GPAFPHRAT 251
A+ + A PA VA+ P P I P G F +
Sbjct: 1285 AAVSNLEEPASPAAAVPTPEVAAIPAASVPTPEVPAIPAAAVPPMEEVSPIGVPFLGVSA 1344
Query: 252 HLDPARLSPESAP 264
H D +S E P
Sbjct: 1345 HTDSVPISEEGTP 1357
>gi|23065526 growth arrest-specific 2 like 1 isoform a [Homo
sapiens]
Length = 681
Score = 50.8 bits (120), Expect = 3e-06
Identities = 64/226 (28%), Positives = 86/226 (38%), Gaps = 25/226 (11%)
Query: 249 RATHLDPARLSPESAPGPARRGRASVPGPARRGCDSAPGP-ARRGRDSAPVSAPRGRDSA 307
R P R+SP ++P PA + VPG RRG P + R P + PR RD
Sbjct: 287 RVCTFSPQRVSPTTSPRPA----SPVPGSERRGSRPEMTPVSLRSTKEGPETPPRPRDQL 342
Query: 308 PGSARRGRDSAPGPALRVRTARSDAGHRSTSTTP-GTGLRSRSTQQRSALLSRRSLSGSA 366
P P P R + SD+ S + P GT T R SRR +G+
Sbjct: 343 P----------PHPRSRRYSGDSDSSASSAQSGPLGTRSDDTGTGPRRERPSRRLTTGT- 391
Query: 367 DENPSCGTGSERLAFQSRS----GSPDPEVPSRASPPVWHAVRMRASSPSPPGRFFLPIP 422
P+ L QSR G P R + + RA S S + L +
Sbjct: 392 ---PASPRRPPALRSQSRDRLDRGRPRGAPGGRGAQLSVPSPARRARSQSREEQAVLLVR 448
Query: 423 QQWD-ESSSSSYASNSSSPSRSPGLSPSSPSPEFLGLRSISTPSPE 467
+ D + S S RS +P + SP L +S+PSPE
Sbjct: 449 RDRDGQHSWVPRGRGSGGSGRSTPQTPRARSPAAPRLSRVSSPSPE 494
Score = 48.5 bits (114), Expect = 1e-05
Identities = 97/345 (28%), Positives = 121/345 (35%), Gaps = 67/345 (19%)
Query: 142 PGNSRRRKQPCRNQAAPAQKPPGRRLFPEP---LPPSSPGFRPSSYPCSGASTSS-QATQ 197
PG+ RR +P + G P P LPP P S SG S SS + Q
Sbjct: 309 PGSERRGSRPEMTPVSLRSTKEGPETPPRPRDQLPP-----HPRSRRYSGDSDSSASSAQ 363
Query: 198 PGPALLSHASEARPATRSRITLVASALRRRASGPGPVIRGCTAQP--GPAFPHRA-THLD 254
GP TRS T RR + G A P PA ++ LD
Sbjct: 364 SGPL----------GTRSDDTGTGP---RRERPSRRLTTGTPASPRRPPALRSQSRDRLD 410
Query: 255 PARLSPESAPGPARRGRASVPGPARRGC-----DSAPGPARRGRDSAPVSAPRGRDSAPG 309
R P APG R + SVP PARR + A RR RD PRGR G
Sbjct: 411 RGR--PRGAPG-GRGAQLSVPSPARRARSQSREEQAVLLVRRDRDGQHSWVPRGR----G 463
Query: 310 SARRGRDSAPGPALR----VRTARSDAGHRSTSTTPGTGLRS---RSTQQRSALLSR--- 359
S GR + P R R +R + TTP + R+ QQ L R
Sbjct: 464 SGGSGRSTPQTPRARSPAAPRLSRVSSPSPELGTTPASIFRTPLQLDPQQEQQLFRRLEE 523
Query: 360 ------RSLSGSADENPSCGTGSERLAFQSRSGSPDPEVP------SRASPPVWHAVRMR 407
R+L A P TG + +PDP P S +S + +
Sbjct: 524 EFLANARALEAVASVTP---TGPA----PDPARAPDPPAPDSAYCSSSSSSSSLSVLGGK 576
Query: 408 ASSPSPPGRFFLPIPQQWDESSSSSYASNSSSPSRSPGL-SPSSP 451
P GR +P ++ SSS S P L +P SP
Sbjct: 577 CGQPGDSGRTANGLPGPRSQALSSSSDEGSPCPGMGGPLDAPGSP 621
Score = 36.6 bits (83), Expect = 0.055
Identities = 39/138 (28%), Positives = 51/138 (36%), Gaps = 22/138 (15%)
Query: 275 PGPARRGCDSAPGPA--RRGRDSAPVSAPRGRDSAPGSARRGRDSAPGPALRVRTARSDA 332
P PAR AP A S+ +S G+ PG + R + PGP + ++ SD
Sbjct: 545 PDPARAPDPPAPDSAYCSSSSSSSSLSVLGGKCGQPGDSGRTANGLPGPRSQALSSSSDE 604
Query: 333 GHRSTSTTPGTG--LRSRSTQQRSALLSRRSLSGSADENPSCGTGSERLAFQSRSGSPDP 390
G S PG G L + + SR G D P + S P P
Sbjct: 605 G----SPCPGMGGPLDAPGSPLACTEPSRTWARGRMDTQPD----------RKPSRIPTP 650
Query: 391 EVPSRASPP----VWHAV 404
P R S P WHA+
Sbjct: 651 RGPRRPSGPAELGTWHAL 668
>gi|19923777 growth arrest-specific 2 like 1 isoform a [Homo
sapiens]
Length = 681
Score = 50.8 bits (120), Expect = 3e-06
Identities = 64/226 (28%), Positives = 86/226 (38%), Gaps = 25/226 (11%)
Query: 249 RATHLDPARLSPESAPGPARRGRASVPGPARRGCDSAPGP-ARRGRDSAPVSAPRGRDSA 307
R P R+SP ++P PA + VPG RRG P + R P + PR RD
Sbjct: 287 RVCTFSPQRVSPTTSPRPA----SPVPGSERRGSRPEMTPVSLRSTKEGPETPPRPRDQL 342
Query: 308 PGSARRGRDSAPGPALRVRTARSDAGHRSTSTTP-GTGLRSRSTQQRSALLSRRSLSGSA 366
P P P R + SD+ S + P GT T R SRR +G+
Sbjct: 343 P----------PHPRSRRYSGDSDSSASSAQSGPLGTRSDDTGTGPRRERPSRRLTTGT- 391
Query: 367 DENPSCGTGSERLAFQSRS----GSPDPEVPSRASPPVWHAVRMRASSPSPPGRFFLPIP 422
P+ L QSR G P R + + RA S S + L +
Sbjct: 392 ---PASPRRPPALRSQSRDRLDRGRPRGAPGGRGAQLSVPSPARRARSQSREEQAVLLVR 448
Query: 423 QQWD-ESSSSSYASNSSSPSRSPGLSPSSPSPEFLGLRSISTPSPE 467
+ D + S S RS +P + SP L +S+PSPE
Sbjct: 449 RDRDGQHSWVPRGRGSGGSGRSTPQTPRARSPAAPRLSRVSSPSPE 494
Score = 48.5 bits (114), Expect = 1e-05
Identities = 97/345 (28%), Positives = 121/345 (35%), Gaps = 67/345 (19%)
Query: 142 PGNSRRRKQPCRNQAAPAQKPPGRRLFPEP---LPPSSPGFRPSSYPCSGASTSS-QATQ 197
PG+ RR +P + G P P LPP P S SG S SS + Q
Sbjct: 309 PGSERRGSRPEMTPVSLRSTKEGPETPPRPRDQLPP-----HPRSRRYSGDSDSSASSAQ 363
Query: 198 PGPALLSHASEARPATRSRITLVASALRRRASGPGPVIRGCTAQP--GPAFPHRA-THLD 254
GP TRS T RR + G A P PA ++ LD
Sbjct: 364 SGPL----------GTRSDDTGTGP---RRERPSRRLTTGTPASPRRPPALRSQSRDRLD 410
Query: 255 PARLSPESAPGPARRGRASVPGPARRGC-----DSAPGPARRGRDSAPVSAPRGRDSAPG 309
R P APG R + SVP PARR + A RR RD PRGR G
Sbjct: 411 RGR--PRGAPG-GRGAQLSVPSPARRARSQSREEQAVLLVRRDRDGQHSWVPRGR----G 463
Query: 310 SARRGRDSAPGPALR----VRTARSDAGHRSTSTTPGTGLRS---RSTQQRSALLSR--- 359
S GR + P R R +R + TTP + R+ QQ L R
Sbjct: 464 SGGSGRSTPQTPRARSPAAPRLSRVSSPSPELGTTPASIFRTPLQLDPQQEQQLFRRLEE 523
Query: 360 ------RSLSGSADENPSCGTGSERLAFQSRSGSPDPEVP------SRASPPVWHAVRMR 407
R+L A P TG + +PDP P S +S + +
Sbjct: 524 EFLANARALEAVASVTP---TGPA----PDPARAPDPPAPDSAYCSSSSSSSSLSVLGGK 576
Query: 408 ASSPSPPGRFFLPIPQQWDESSSSSYASNSSSPSRSPGL-SPSSP 451
P GR +P ++ SSS S P L +P SP
Sbjct: 577 CGQPGDSGRTANGLPGPRSQALSSSSDEGSPCPGMGGPLDAPGSP 621
Score = 36.6 bits (83), Expect = 0.055
Identities = 39/138 (28%), Positives = 51/138 (36%), Gaps = 22/138 (15%)
Query: 275 PGPARRGCDSAPGPA--RRGRDSAPVSAPRGRDSAPGSARRGRDSAPGPALRVRTARSDA 332
P PAR AP A S+ +S G+ PG + R + PGP + ++ SD
Sbjct: 545 PDPARAPDPPAPDSAYCSSSSSSSSLSVLGGKCGQPGDSGRTANGLPGPRSQALSSSSDE 604
Query: 333 GHRSTSTTPGTG--LRSRSTQQRSALLSRRSLSGSADENPSCGTGSERLAFQSRSGSPDP 390
G S PG G L + + SR G D P + S P P
Sbjct: 605 G----SPCPGMGGPLDAPGSPLACTEPSRTWARGRMDTQPD----------RKPSRIPTP 650
Query: 391 EVPSRASPP----VWHAV 404
P R S P WHA+
Sbjct: 651 RGPRRPSGPAELGTWHAL 668
>gi|18959210 WIRE protein [Homo sapiens]
Length = 440
Score = 50.8 bits (120), Expect = 3e-06
Identities = 63/211 (29%), Positives = 77/211 (36%), Gaps = 40/211 (18%)
Query: 149 KQPCRNQAAPAQKPPGRRLFP-EPLPPSSPGFRPSSYPC---SGASTSSQATQPGP---- 200
K P N+ P PG+RL P PP+ P +P P +G S S A P P
Sbjct: 199 KAPAYNREKPLPPTPGQRLHPGREGPPAPPPVKPPPSPVNIRTGPSGQSLAPPPPPYRQP 258
Query: 201 -----ALLSHASEARPATRSRITLVASALRRRASGPGPVIRGCTAQPGPAFPHRATHLDP 255
S +E+ P R ++L R+ GP +RG P T P
Sbjct: 259 PGVPNGPSSPTNESAPELPQR----HNSLHRKTPGP---VRGLAPPP-------PTSASP 304
Query: 256 ARLS---PESAPGPARRGRASVPGP--ARRGCDSAPGPARRGRDSAPVSAPRGRDSAPGS 310
+ LS P A P RG A P P R G AP P R RG+ P S
Sbjct: 305 SLLSNRPPPPARDPPSRGAAPPPPPPVIRNGARDAPPPPPPYRMHGSEPPSRGKPPPPPS 364
Query: 311 -ARRGRDSAPGPALRVRTARSDAGHRSTSTT 340
G P P LR GHR + TT
Sbjct: 365 RTPAGPPPPPPPPLR-------NGHRDSITT 388
Score = 40.8 bits (94), Expect = 0.003
Identities = 60/263 (22%), Positives = 83/263 (31%), Gaps = 41/263 (15%)
Query: 227 RASGPGPVIRGCTAQP-GPAFPHRATHLDPARLSPESAPGPARRGRASVPGPARRGCDSA 285
RA+ P P + + +P RA+ + R+ S P +R S G
Sbjct: 119 RAAAPRPPVSAASGRPQDDTDSSRASLPELPRMQRPSLPDLSRPNTTSSTGMKHSSSAPP 178
Query: 286 PGPARRGRDSAPVSAPRGRDSAPGSARR-------------GRDSAPGP--------ALR 324
P P R ++ P P AP R GR+ P P +
Sbjct: 179 PPPPGRRANAPPTPLPMHSSKAPAYNREKPLPPTPGQRLHPGREGPPAPPPVKPPPSPVN 238
Query: 325 VRTARSDAG-------HRSTSTTPG-----TGLRSRSTQQRSALLSRRSLSGSADENPSC 372
+RT S +R P T + QR L R++ P
Sbjct: 239 IRTGPSGQSLAPPPPPYRQPPGVPNGPSSPTNESAPELPQRHNSLHRKTPGPVRGLAPPP 298
Query: 373 GTGSERLAFQSRSGSPDPEVPSR--ASPPVWHAVRMRASSPSPPGRFFLPIPQQWDESSS 430
T + +R P + PSR A PP +R A PP P P + S
Sbjct: 299 PTSASPSLLSNRPPPPARDPPSRGAAPPPPPPVIRNGARDAPPP-----PPPYRMHGSEP 353
Query: 431 SSYASNSSSPSRSPGLSPSSPSP 453
S PSR+P P P P
Sbjct: 354 PSRGKPPPPPSRTPAGPPPPPPP 376
Score = 36.2 bits (82), Expect = 0.071
Identities = 36/136 (26%), Positives = 54/136 (39%), Gaps = 18/136 (13%)
Query: 375 GSERLAFQ-------SRSGSPDPEVPSRASPPVWHAVRMRASSPSPPGRFFLPIPQQWDE 427
GSE LA + SR+ +P P V + + P RAS P P +P
Sbjct: 103 GSENLAGKPALQIPSSRAAAPRPPVSAASGRPQDDTDSSRASLPELPRMQRPSLPDLSRP 162
Query: 428 SSSSSYASNSSSPSRSPGLSPSSPSPEFLGLRSISTPSPESLRYALMPEFYALSPVPPEE 487
+++SS SS S+P P G R+ + P+P + + P + P+PP
Sbjct: 163 NTTSSTGMKHSS---------SAPPPPPPGRRANAPPTPLPMHSSKAPAYNREKPLPPTP 213
Query: 488 QAEIE--STAHPATPP 501
+ PA PP
Sbjct: 214 GQRLHPGREGPPAPPP 229
>gi|21735552 mitogen-activated protein kinase kinase kinase 12 [Homo
sapiens]
Length = 859
Score = 50.4 bits (119), Expect = 4e-06
Identities = 76/260 (29%), Positives = 99/260 (38%), Gaps = 32/260 (12%)
Query: 141 SPGNSRRRKQPCRNQAAPAQ--KPPGRRLFPEPLPPSSPGFRPSSYPCSGASTSSQATQP 198
SPG SRR K R +A PG R +PP PG S G ++ +A P
Sbjct: 536 SPGRSRRGKTRHRKASAKGSCGDLPGLRT---AVPPHEPGGPGSPGGLGGGPSAWEACPP 592
Query: 199 GPALLSHASEARPATRSRITLVASALRRRASGPGPVIRGCTAQPGPAFPHRATHLDPARL 258
L H R + S L+++AL R G G PG P R
Sbjct: 593 ALRGLHHDLLLRKMSSSSPDLLSAALGSRGRG----ATGGAGDPGSPPPARG----DTPP 644
Query: 259 SPESAPGPARRGRASVPGPARRGCDSAPGPARRGRDSAPVSAPRGRDSAPGSARRGRDSA 318
S SAPG PG A+ P P G + R S G +R G
Sbjct: 645 SEGSAPGST---SPDSPGGAK---GEPPPPVGPGEGVGLLGTGREGTSGRGGSRAGSQHL 698
Query: 319 PGPALRVRTARSDAGHRSTSTTPGTG-----LRSRSTQQ-RSALLSRRSLSGSADENPSC 372
AL R A + + R S+ G + S+Q+ +L R+SLS + ENPS
Sbjct: 699 TPAALLYRAAVTRSQKRGISSEEEEGEVDSEVELTSSQRWPQSLNMRQSLSTFSSENPSD 758
Query: 373 ---GTGSERLAFQSRSGSPD 389
GT SE S SG+P+
Sbjct: 759 GEEGTASE----PSPSGTPE 774
>gi|239743051 PREDICTED: hypothetical protein XP_002342747 [Homo
sapiens]
Length = 306
Score = 50.4 bits (119), Expect = 4e-06
Identities = 70/257 (27%), Positives = 91/257 (35%), Gaps = 35/257 (13%)
Query: 130 GHADEHLAQTKSPGNSRRRKQPCRNQAAPAQKPPGRRLFPEPLPPSSPGFRPSSYPCS-- 187
G + SP ++ Q +AA A P R E P P RP+
Sbjct: 45 GGTGQRRGSGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQPQRRPAGGTGQRR 104
Query: 188 GASTSSQATQ-------------PGPALLSHASEARPATRSRITLVASALRRRASGPGPV 234
G+ +SS A Q P P H +E R + + A +RR SG P
Sbjct: 105 GSRSSSSADQQGAQDREEEAAAAPAPTSSGHRTEKRKPQQPQCRPAAGTGQRRGSGCSPS 164
Query: 235 I---------RGCTAQPGPAFP-HRATHLDPARLSPESAPGPA-RRGRASVPG--PA--- 278
TA P P HR +L + A G RRG S P PA
Sbjct: 165 ADQQRAQDREEEATAAPVPTSSGHRTEKRKRLQLQCQPAGGTGQRRGSRSSPSRQPAGGT 224
Query: 279 --RRGCDSAPGP-ARRGRDSAPVSAPRGRDSAPGSA-RRGRDSAPGPALRVRTARSDAGH 334
RRG S+P +R +D +A R A G+ RRG +AP P R
Sbjct: 225 GQRRGSRSSPSADQQRAQDREEEAAQPQRRPAGGTGQRRGTAAAPVPTTGGTGQRRGTAA 284
Query: 335 RSTSTTPGTGLRSRSTQ 351
T+ GTG R S +
Sbjct: 285 APAPTSTGTGQRRGSEE 301
>gi|55741677 SET domain containing 1A [Homo sapiens]
Length = 1707
Score = 50.4 bits (119), Expect = 4e-06
Identities = 112/472 (23%), Positives = 166/472 (35%), Gaps = 77/472 (16%)
Query: 4 QSDMEKEQKHQQDEGQGGLNNETALASGD-------------ACGTGNQDPAASVTTVSS 50
+ D E E+ ++E ET ++ G+ A G D + + SS
Sbjct: 979 EDDEEDEEDEDREEAVDTTKKETEVSDGEDEESDSSSKCSLYADSDGENDSTSDSESSSS 1038
Query: 51 QASPSGGAALSSSTAGSSAAAATSAAIFITDEASGLPIIAAVLTERHSDRQDCRSPHEVF 110
+S S ++ SSS++ SS++ ++S + + LP + E +P EV
Sbjct: 1039 SSSSSSSSSSSSSSSSSSSSESSSEDEEEEERPAALPSASPPPREVPVPTP---APVEV- 1094
Query: 111 GCVVPEGGSQAAVGP---QKATGHADEHLAQTKSPGNSRRRKQPCRNQAAPAQKPPGRRL 167
VPE + + V P Q+A+ + P R +P APA +P R
Sbjct: 1095 --PVPERVAGSPVTPLPEQEASPARPAGPTEESPPSAPLRPPEPPAGPPAPAPRPDERPS 1152
Query: 168 FPEP-LPPSSPGFRPSSY--------PCSGASTSSQATQPGPAL---------------L 203
P P LPP + S+ P +T QA PGPA L
Sbjct: 1153 SPIPLLPPPKKRRKTVSFSAIEVVPAPEPPPATPPQAKFPGPASRKAPRGVERTIRNLPL 1212
Query: 204 SHASEARPATRSRITLVASALRRRASGPGPVIRGCTAQPGPAFPHRATHLDPARLSPESA 263
HAS +S V+ R RA G G + A+PG T +D A L+ + A
Sbjct: 1213 DHAS----LVKSWPEEVSRGGRSRAGGRGRLTEEEEAEPG-------TEVDLAVLA-DLA 1260
Query: 264 PGPARRGRASVPGPARRGCDSAPGPARRGRDSAP------VSAPRGRDSAPGSARRGRDS 317
PARRG ++P A R R A + + P A R +
Sbjct: 1261 LTPARRGLPALPAVEDSEATETSDEAERPRPLLSHILLEHNYALAVKPTPPAPALRPPEP 1320
Query: 318 APGPALRVRTARSDAGHRSTSTTPGTGLRSRSTQQRSALLSRRSLSGSADENPSCGTGSE 377
P PA + + P + + L +R +E G E
Sbjct: 1321 VPAPAALFSSPADE-----VLEAPEVVVAEAEEPKPQQLQQQR--EEGEEEGEEEGEEEE 1373
Query: 378 RLAFQSRSGSPDPEVPSRASPPVWHAVRMRASSPSPPGRFFLPIPQQWDESS 429
+ S S S D E R HA R R P PP P P+ ++ S
Sbjct: 1374 EESSDS-SSSSDGEGALRRRSLRSHARRRRPPPPPPP-----PPPRAYEPRS 1419
Score = 39.7 bits (91), Expect = 0.006
Identities = 108/499 (21%), Positives = 164/499 (32%), Gaps = 82/499 (16%)
Query: 51 QASPSGGAALSSSTAGSSAAAATS----------AAIFITDEASGLP---IIAAVLTERH 97
Q P+GG ALS GS AA T+ AA A G P + T
Sbjct: 191 QTVPTGGKALSEKFQGSGAATETAESRRRSSSDTAAYPAGTTAVGTPGNGTPCSQDTSFS 250
Query: 98 SDRQDCRSPHEVFGCVVPEGGSQAAVGPQKATGHADEHLAQTKSPGNSRRRKQPCRNQAA 157
S RQD S FG P+ + +T ++ + + + S + P R++ +
Sbjct: 251 SSRQDTPSS---FGQFTPQSSQGTPYTSRGSTPYSQDSAYSSSTTSTSFK---PRRSENS 304
Query: 158 PAQKPPGRRLFPEPLPPSSPGFRPSSYPCSGASTSSQATQPGPALLSHASEARPATRS-- 215
Q RR F ++ ++ + AS+S+ ++ + S +S + RS
Sbjct: 305 -YQDAFSRRHFSASSASTTASTAIAATTAATASSSASSSSLSSSSSSSSSSSSSQFRSSD 363
Query: 216 --------------RITLVASALRRRASGPGPVIRGCTAQ-----------PGPAFPHRA 250
R T R PG TA+ P P+ P
Sbjct: 364 ANYPAYYESWNRYQRHTSYPPRRATREEPPGAPFAENTAERFPPSYTSYLPPEPSRPTDQ 423
Query: 251 THLDPA-RLSPESAPGPARRGRASVPGPARRGCDSAPGPARRGRDSAPVSAPRGRDSAPG 309
+ PA P P P G P P R ++P PA R +P + +S P
Sbjct: 424 DYRPPASEAPPPEPPEPGGGGGGGGPSPEREEVRTSPRPASPARSGSP-APETTNESVPF 482
Query: 310 SARRGRDSAPGPALRVRTAR-----SDAGHRSTSTTPGTGLRSRSTQQRSALLSRRSLSG 364
+ DS L+ + ++ SD +++ G R ++ S SG
Sbjct: 483 AQHSSLDSRIEMLLKEQRSKFSFLASDTEEEEENSSMVLGARDTGSEVPSG-------SG 535
Query: 365 SADENPSCGTGSERLAFQSRSGSPDPEVPSRASPPVWHAVRMRASSPSPPGRFFLPIPQQ 424
P + + SG P +R SP A +SP G +
Sbjct: 536 HGPCTPPPAPANFEDVAPTGSGEPG---ATRESP---KANGQNQASPCSSGD---DMEIS 586
Query: 425 WDESSSSSYASNSSSPSRSPGLSPSSPSPEFLGLRSISTPSPESLRYALMPEFYALSPVP 484
D+ S + + P P P P +L + P P Y L P P P
Sbjct: 587 DDDRGGSPPPAPTPPQQPPPPPPPPPPPPPYLASLPLGYP-PHQPAYLLPPR--PDGPPP 643
Query: 485 PEEQAEIESTAHPATPPEP 503
PE +P PP P
Sbjct: 644 PE---------YPPPPPPP 653
Score = 35.8 bits (81), Expect = 0.093
Identities = 42/187 (22%), Positives = 70/187 (37%), Gaps = 23/187 (12%)
Query: 330 SDAGHRSTSTTPGTGLRSRSTQQRSALLSRRSLSGSADENPSCGTGSERLAFQSRSGSPD 389
SD+ + + G ++ S+ S S S S+ + S + S + +
Sbjct: 1011 SDSSSKCSLYADSDGENDSTSDSESSSSSSSSSSSSSSSSSSSSSSSSESSSEDEEEEER 1070
Query: 390 PEVPSRASPPVWHAVRMRASSPSPPGRFFLPIPQQWDESSSSSYASNSSSPSRSPGLSPS 449
P ASPP R P +P+P++ S + +SP+R G P+
Sbjct: 1071 PAALPSASPPP------REVPVPTPAPVEVPVPERVAGSPVTPLPEQEASPARPAG--PT 1122
Query: 450 SPSPEFLGLRSISTPSPESLRYALMPEFYALSPV----PPEEQAEIESTA---------- 495
SP LR P+ A P+ SP+ PP+++ + S +
Sbjct: 1123 EESPPSAPLRPPEPPAGPPAP-APRPDERPSSPIPLLPPPKKRRKTVSFSAIEVVPAPEP 1181
Query: 496 HPATPPE 502
PATPP+
Sbjct: 1182 PPATPPQ 1188
Score = 33.5 bits (75), Expect = 0.46
Identities = 33/95 (34%), Positives = 43/95 (45%), Gaps = 24/95 (25%)
Query: 428 SSSSSYASNSSSPSRS--------PGLSPSSPSPEFLGLRSISTPSPESLRYALMPEFYA 479
SSSSS +S+SSS S S P PS+ P R + P+P + + PE A
Sbjct: 1047 SSSSSSSSSSSSESSSEDEEEEERPAALPSASPPP----REVPVPTPAPVEVPV-PERVA 1101
Query: 480 LSPVPP--EEQA---------EIESTAHPATPPEP 503
SPV P E++A E + P PPEP
Sbjct: 1102 GSPVTPLPEQEASPARPAGPTEESPPSAPLRPPEP 1136
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.309 0.124 0.366
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,875,046
Number of Sequences: 37866
Number of extensions: 1815233
Number of successful extensions: 15882
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 155
Number of HSP's successfully gapped in prelim test: 1626
Number of HSP's that attempted gapping in prelim test: 10558
Number of HSP's gapped (non-prelim): 5360
length of query: 503
length of database: 18,247,518
effective HSP length: 107
effective length of query: 396
effective length of database: 14,195,856
effective search space: 5621558976
effective search space used: 5621558976
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.