Guide to the Human Genome
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Name: FOXM1 Sequence: fasta or formatted (801aa) NCBI GI: 42544167
Description:

forkhead box M1 isoform 1

Referenced in:

FOX Family

Other entries for this name:
alt prot [748aa] forkhead box M1 isoform 3
alt prot [763aa] forkhead box M1 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         43           2
 C cysteine            1.1          9           1
 D aspartate           3.5         28           1
 E glutamate           7.9         63           3
 F phenylalanine       3.4         27           2
 G glycine             5.1         41           2
 H histidine           1.7         14           1
 I isoleucine          4.7         38           2
 K lysine              5.6         45           2
 L leucine            10.0         80           2
 M methionine          2.0         16           1
 N asparagine          3.6         29           2
 P proline            11.7         94           2
 Q glutamine           4.6         37           2
 R arginine            5.9         47           3
 S serine             12.0         96           2
 T threonine           4.7         38           2
 V valine              4.5         36           2
 W tryptophan          1.2         10           1
 Y tyrosine            1.2         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   forkhead box M1 isoform 1 
FOXM1                 0.940   forkhead box M1 isoform 2 
FOXM1                 0.913   forkhead box M1 isoform 3 
FOXJ3                 0.043   forkhead box J3 
FOXN2                 0.040   T-cell leukemia virus enhancer factor 
FOXJ2                 0.040   forkhead box J2 
FOXL1                 0.039   forkhead box L1 
FOXI1                 0.036   forkhead box I1 isoform a 
FOXC1                 0.036   forkhead box C1 
FOXF2                 0.036   forkhead box F2 
FOXF1                 0.036   forkhead box F1 
FOXC2                 0.036   forkhead box C2 
FOXI3                 0.036   forkhead box I3 
FOXD2                 0.036   forkhead box D2 
FOXI2                 0.036   forkhead box I2 
FOXN3                 0.036   checkpoint suppressor 1 isoform 1 
FOXN3                 0.036   checkpoint suppressor 1 isoform 2 
FOXA1                 0.035   forkhead box A1 
FOXJ1                 0.035   forkhead box J1 
FOXS1                 0.035   forkhead box S1 
FOXA2                 0.035   forkhead box A2 isoform 2 
FOXA2                 0.035   forkhead box A2 isoform 1 
FOXB1                 0.035   forkhead box B1 
FOXA3                 0.035   forkhead box A3 
FOXD1                 0.035   forkhead box D1 
FOXG1                 0.035   forkhead box G1 
FOXD3                 0.034   forkhead box D3 
FOXD4L3               0.034   forkhead box D4-like 3 
FOXD4L1               0.034   forkhead box D4-like 1 
FOXD4L2               0.034   forkhead box D4-like 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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