LRIT1 3715

Name: LRIT1	Sequence: fasta or formatted (623aa)		NCBI GI: 14149694
Description: retina specific protein PAL		Referenced in: Leucine-rich Repeat Family
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.3 58 3 C cysteine 2.9 18 2 D aspartate 3.5 22 1 E glutamate 5.5 34 2 F phenylalanine 2.7 17 1 G glycine 7.4 46 4 H histidine 2.2 14 2 I isoleucine 3.0 19 1 K lysine 2.9 18 1 L leucine 13.3 83 2 M methionine 1.6 10 1 N asparagine 3.4 21 2 P proline 6.7 42 2 Q glutamine 3.5 22 2 R arginine 7.9 49 2 S serine 7.5 47 2 T threonine 5.3 33 2 V valine 7.9 49 3 W tryptophan 1.8 11 1 Y tyrosine 1.6 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 retina specific protein PAL LRIT3 0.253 leucine-rich repeat, immunoglobulin-like and transm... LRIT2 0.134 leucine rich repeat containing 22 LRRC24 0.080 leucine rich repeat containing 24 ISLR 0.069 immunoglobulin superfamily containing leucine-rich r... ISLR 0.069 immunoglobulin superfamily containing leucine-rich re... LRFN3 0.066 leucine rich repeat and fibronectin type III domain ... ISLR2 0.065 immunoglobulin superfamily containing leucine-rich ... ISLR2 0.065 immunoglobulin superfamily containing leucine-rich ... ISLR2 0.065 immunoglobulin superfamily containing leucine-rich r... ISLR2 0.065 immunoglobulin superfamily containing leucine-rich ... SLIT2 0.063 slit homolog 2 SLIT1 0.063 slit homolog 1 LRFN4 0.062 leucine rich repeat and fibronectin type III domain ... LRFN5 0.061 leucine rich repeat and fibronectin type III domain ... SLIT3 0.057 slit homolog 3 PXDNL 0.055 peroxidasin homolog-like LRTM1 0.055 leucine-rich repeats and transmembrane domains 1 [Ho... LRFN1 0.054 leucine rich repeat and fibronectin type III domain... LINGO4 0.052 leucine rich repeat and Ig domain containing 4 [Homo... NYX 0.051 nyctalopin precursor LRTM2 0.050 leucine-rich repeats and transmembrane domains 2 [Ho... PXDN 0.049 peroxidasin LRFN2 0.047 leucine rich repeat and fibronectin type III domain ... LRRC4B 0.046 leucine rich repeat containing 4B RTN4R 0.045 reticulon 4 receptor precursor LRG1 0.044 leucine-rich alpha-2-glycoprotein 1 RTN4RL2 0.044 reticulon 4 receptor-like 2 LRRC4C 0.043 netrin-G1 ligand CHADL 0.042 chondroadherin-like Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.