Guide to the Human Genome
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Name: GPX1 Sequence: fasta or formatted (203aa) NCBI GI: 41406084
Description:

glutathione peroxidase 1 isoform 1

Referenced in:

Glutathione Pathways
Selenium Proteins

Other entries for this name:
alt prot [98aa] glutathione peroxidase 1 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.8         24           7
 C cysteine            2.5          5           1
 D aspartate           3.9          8           2
 E glutamate           6.4         13           2
 F phenylalanine       5.4         11           1
 G glycine             8.4         17           3
 H histidine           1.0          2           1
 I isoleucine          3.0          6           1
 K lysine              3.0          6           1
 L leucine            11.3         23           2
 M methionine          2.0          4           1
 N asparagine          4.9         10           1
 P proline             7.4         15           1
 Q glutamine           3.4          7           1
 R arginine            6.9         14           2
 S serine              5.4         11           1
 T threonine           3.4          7           2
 U selenocysteine      0.5          1           1
 V valine              6.4         13           2
 W tryptophan          1.0          2           1
 Y tyrosine            2.0          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   glutathione peroxidase 1 isoform 1 
GPX2                  0.600   glutathione peroxidase 2 
GPX5                  0.379   glutathione peroxidase 5 isoform 1 precursor 
GPX1                  0.361   glutathione peroxidase 1 isoform 2 
GPX3                  0.356   glutathione peroxidase 3 precursor 
GPX6                  0.312   glutathione peroxidase 6 
GPX4                  0.197   glutathione peroxidase 4 isoform A precursor 
GPX4                  0.195   glutathione peroxidase 4 isoform C precursor 
GPX7                  0.192   glutathione peroxidase 7 
GPX4                  0.166   glutathione peroxidase 4 isoform B precursor 
GPX8                  0.158   glutathione peroxidase 8 
ATP8B2                0.018   ATPase, class I, type 8B, member 2 isoform a 
IRX2                  0.013   iroquois homeobox 2 
IRX2                  0.013   iroquois homeobox 2 
E4F1                  0.010   p120E4F 
C3orf75               0.010   transmembrane protein 103 
C6orf174              0.008   hypothetical protein LOC387104 
WT1                   0.008   Wilms tumor 1 isoform D 
WT1                   0.008   Wilms tumor 1 isoform C 
WT1                   0.008   Wilms tumor 1 isoform B 
WT1                   0.008   Wilms tumor 1 isoform A 
DNMT3B                0.008   DNA cytosine-5 methyltransferase 3 beta isoform 6 [H...
DNMT3B                0.008   DNA cytosine-5 methyltransferase 3 beta isoform 3 [H...
DNMT3B                0.008   DNA cytosine-5 methyltransferase 3 beta isoform 2 [H...
DNMT3B                0.008   DNA cytosine-5 methyltransferase 3 beta isoform 1 [Ho...
OPLAH                 0.008   5-oxoprolinase (ATP-hydrolysing) 
RBM24                 0.008   RNA binding motif protein 24 isoform 3 
RBM24                 0.008   RNA binding motif protein 24 isoform 2 
MORC1                 0.008   MORC family CW-type zinc finger 1 
KRTAP4-6              0.008   PREDICTED: keratin associated protein 4.6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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